RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRF5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056492

Ensembl transcript IDs: ENSMUST00000113599.2, ENSMUST00000224278.2, ENSMUST00000225004.2, ENSMUST00000225466.2, ENSMUST00000225962.2, ENSMUST00000226087.2

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGAGGGCTTTGAGTTCTCATAGCCTGATCCCACTTCCAGACTGCTaGGGTGGTGGGTGTGATGGGCTGGCTTCATGCTCCTACAGCCGT +
Preference number: 1 (lower is better)
Translates to: VRALSSHSLIPLPDC*GGGCDGLASCSYSR
Trigger: ACGGCTGTAGGAGCATGAAGCCAGCCCATCACACCCACCACCTCAGCAGTCTGGAAGTGGGATCAGGCTATGAGAACTCAAAGCCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp TGCACGTCGGTCCTAAAGGGTCTGCAGCTTGTGGTTGTTTGGATGTaGATTGTCTCCCATAGGTCCACGTACCAGAACCCTCTGCCCCCA +
Preference number: 1 (lower is better)
Translates to: CTSVLKGLQLVVVWM*IVSHRSTYQNPLPP
Trigger: TGGGGGCAGAGGGTTCTGGTACGTGGACCTATGGGAGACAATTCACATCCAAACAACCACAAGCTGCAGACCCTTTAGGACCGACGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp CCCTTGCTGCCGCAGAACTGGGCACCGGCTCTAGCTTTCACGCAATaGACAGACCCTACGTGTTTCTGTCTTTTACAACTTTGGATGCGA +
Preference number: 1 (lower is better)
Translates to: PLLPQNWAPALAFTQ*TDPTCFCLLQLWMR
Trigger: TCGCATCCAAAGTTGTAAAAGACAGAAACACGTAGGGTCTGTGCATTGCGTGAAAGCTAGAGCCGGTGCCCAGTTCTGCGGCAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TCCGTTCCACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTaGTCCATCCTGATACCTCCTCATGGTATAAAACCTTGGGTGGAT +
Preference number: 1 (lower is better)
Translates to: SVPLSGGGLHHQHRL*SILIPPHGIKPWVD
Trigger: ATCCACCCAAGGTTTTATACCATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTGGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
3UTR CCA 90 bp CTCTCTGAGGTGCCCTGCACAAATCACAAAGGCCCTGACTTCCCTTaGCGTTTCTTCCTTTCCTCCGTAGGTGATGCTTACGGTATTCCC +
Preference number: 1 (lower is better)
Translates to: LSEVPCTNHKGPDFP*RFFLSSVGDAYGIP
Trigger: GGGAATACCGTAAGCATCACCTACGGAGGAAAGGAAGAAACGCCAAGGGAAGTCAGGGCCTTTGTGATTTGTGCAGGGCACCTCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp AAGCAGAAACGGAACCCAAGGGACGGGACTTTGTATGCCCCACTCTaGCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAG +
Preference number: 1 (lower is better)
Translates to: KQKRNPRDGTLYAPL*PSAMKNGEAEIDFK
Trigger: CTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCAGAGTGGGGCATACAAAGTCCCGTCCCTTGGGTTCCGTTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp GGATGTCCCATCCTAGACGCCTCTTGTCTTCCCTCTACTGAACTCTaGTCTGCTTTGGAGACTCCCTGGAGATCTTATCCACATTTCCTG +
Preference number: 1 (lower is better)
Translates to: GCPILDASCLPSTEL*SALETPWRSYPHFL
Trigger: CAGGAAATGTGGATAAGATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAAGAGGCGTCTAGGATGGGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 90 bp ACTATTATGCTACTGTGGAGGATCTCCTTACAAGGTCAAGCCCCATaGCTCCCAAGAGGCACCAATGAAGTGGGCCAAAGCTCAGTGTAC +
Preference number: 1 (lower is better)
Translates to: TIMLLWRISLQGQAP*LPRGTNEVGQSSVY
Trigger: GTACACTGAGCTTTGGCCCACTTCATTGGTGCCTCTTGGGAGCCATGGGGCTTGACCTTGTAAGGAGATCCTCCACAGTAGCATAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp ATCCAAAGGATGTCCCATCCTAGACGCCTCTTGTCTTCCCTCTACTaGACTCTGCTCTGCTTTGGAGACTCCCTGGAGATCTTATCCACA +
Preference number: 1 (lower is better)
Translates to: IQRMSHPRRLLSSLY*TLLCFGDSLEILST
Trigger: TGTGGATAAGATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAAGAGGCGTCTAGGATGGGACATCCTTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp CGAGCTAGAGACTCCTCTGGAAGAGCAGTATATATCCTTAACCACTaGGCAACATCTCCAGCCTCCTTTTCTGGGATTAAGGGCTGTGCC +
Preference number: 1 (lower is better)
Translates to: RARDSSGRAVYILNH*ATSPASFSGIKGCA
Trigger: GGCACAGCCCTTAATCCCAGAAAAGGAGGCTGGAGATGTTGCTCAGTGGTTAAGGATATATACTGCTCTTCCAGAGGAGTCTCTAGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TCCCAACGAAGGACCCACACAGTCTCTCACTCTATAAAAACTCAATaGTGCACGTCGGTCCTAAAGGGTCTGCAGCTTGTGGTTGTTTGG +
Preference number: 1 (lower is better)
Translates to: SQRRTHTVSHSIKTQ*CTSVLKGLQLVVVW
Trigger: CCAAACAACCACAAGCTGCAGACCCTTTAGGACCGACGTGCAGCATTGAGTTTTTATAGAGTGAGAGACTGTGTGGGTCCTTCGTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp AAGACGTCCATGTTGCCTTGTTATACCATGCAAATCCCTCTGGCTTaGTGCTCCTTAGTGCAACTCAAGGGGCTGAACATTCCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: KTSMLPCYTMQIPLA*CSLVQLKGLNIPGH
Trigger: ATGGCCAGGAATGTTCAGCCCCTTGAGTTGCACTAAGGAGCATCAAGCCAGAGGGATTTGCATGGTATAACAAGGCAACATGGACGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp GAGCAACATCTCCAGCCTCCTTTTCTGGGATTAAGGGCTGTGCCTTaGAAGATCAAGGTACGTCTGTGTATGTGCGTGTTGGAGTGGATA +
Preference number: 1 (lower is better)
Translates to: EQHLQPPFLGLRAVP*KIKVRLCMCVLEWI
Trigger: TATCCACTCCAACACGCACATACACAGACGTACCTTGATCTTTCAAGGCACAGCCCTTAATCCCAGAAAAGGAGGCTGGAGATGTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp CAACGAAGGACCCACACAGTCTCTCACTCTATAAAAACTCAATGCTaGACGTCGGTCCTAAAGGGTCTGCAGCTTGTGGTTGTTTGGATG +
Preference number: 1 (lower is better)
Translates to: QRRTHTVSHSIKTQC*TSVLKGLQLVVVWM
Trigger: CATCCAAACAACCACAAGCTGCAGACCCTTTAGGACCGACGTGCAGCATTGAGTTTTTATAGAGTGAGAGACTGTGTGGGTCCTTCGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TTTGTAGGCATGCTAATTGGTGAAAGGGAGACGTGTCTCTCTGAATaGAAGCAGGCAGAGGGCCAGATCTGCATGCTATGGAATTCAGCT +
Preference number: 1 (lower is better)
Translates to: FVGMLIGERETCLSE*KQAEGQICMLWNSA
Trigger: AGCTGAATTCCATAGCATGCAGATCTGGCCCTCTGCCTGCTTGCATTCAGAGAGACACGTCTCCCTTTCACCAATTAGCATGCCTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TCTCATCTTTGTGTGTATTTTCTCCCAACACAGACCTCTCTGAGGTaGCCTGCACAAATCACAAAGGCCCTGACTTCCCTTGGCGTTTCT +
Preference number: 1 (lower is better)
Translates to: SHLCVYFLPTQTSLR*PAQITKALTSLGVS
Trigger: AGAAACGCCAAGGGAAGTCAGGGCCTTTGTGATTTGTGCAGGGCACCTCAGAGAGGTCTGTGTTGGGAGAAAATACACACAAAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp TCTTACTACAGCAATGAGAAGTTAACTGACACTGTTCCTTTGGGTTaGCACCCTGATGTGGGGTGCATGCTTGCTCTTGGATATGGAACC +
Preference number: 1 (lower is better)
Translates to: SYYSNEKLTDTVPLG*HPDVGCMLALGYGT
Trigger: GGTTCCATATCCAAGAGCAAGCATGCACCCCACATCAGGGTGTCAACCCAAAGGAACAGTGTCAGTTAACTTCTCATTGCTGTAGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TTCATATGTGTCCTTGTCATGAGAACTGTGTCTCCTTGGGTGCATTaGCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGAC +
Preference number: 1 (lower is better)
Translates to: FICVLVMRTVSPWVH*LQILLSSQKHPRAD
Trigger: GTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACACAGTTCTCATGACAAGGACACATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR CCA 90 bp CCAGTTGATGGTGCTGTTTGGGAAGATTATAGAACTTTTAGGAGGTaGAACCTGCCTAGAGGAAAGATGTCACTGTGTGAGGGCTTTGAG +
Preference number: 1 (lower is better)
Translates to: PVDGAVWEDYRTFRR*NLPRGKMSLCEGFE
Trigger: CTCAAAGCCCTCACACAGTGACATCTTTCCTCTAGGCAGGTTCCACCTCCTAAAAGTTCTATAATCTTCCCAAACAGCACCATCAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp CTTACAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTaGTCAGACCTTGACATACAAAGGTTCATATGTGTCCTTGTCATG +
Preference number: 1 (lower is better)
Translates to: LTEWLSYVLCMFTVL*SDLDIQRFICVLVM
Trigger: CATGACAAGGACACATATGAACCTTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR GCA 90 bp TTTGGATGTGAATTGTCTCCCATAGGTCCACGTACCAGAACCCTCTaGCCCCAGTTGATGGTGCTGTTTGGGAAGATTATAGAACTTTTA +
Preference number: 1 (lower is better)
Translates to: FGCELSPIGPRTRTL*PQLMVLFGKIIELL
Trigger: TAAAAGTTCTATAATCTTCCCAAACAGCACCATCAACTGGGGGCAGAGGGTTCTGGTACGTGGACCTATGGGAGACAATTCACATCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp GTATGTGTGTGTGTGCGTGAATATATACATATACATATGTGTGTGTaGGCGCGTGCACATGTGCGCACACATGTTCCTGTGTGTCTTGAT +
Preference number: 1 (lower is better)
Translates to: VCVCVREYIHIHMCV*ARAHVRTHVPVCLD
Trigger: ATCAAGACACACAGGAACATGTGTGCGCACATGTGCACGCGCGCACACACACATATGTATATGTATATATTCACGCACACACACACATAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp GTTAATGTGTGTTCATATGTGCCTGGGGGTGTGTATGTGTGTGTGTaGGTGAATATATACATATACATATGTGTGTGTGCGCGCGTGCAC +
Preference number: 1 (lower is better)
Translates to: VNVCSYVPGGVYVCV*VNIYIYICVCARVH
Trigger: GTGCACGCGCGCACACACACATATGTATATGTATATATTCACGCACACACACACATACACACCCCCAGGCACATATGAACACACATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 90 bp AATCTACTTTACATAATAAAGACATGTGGGAATGTGGGCAGTAGGTaGCGCTCTCTTAGCAAAGTGAACATGACTCACTTGGCACCCAGG +
Preference number: 1 (lower is better)
Translates to: NLLYIIKTCGNVGSR*RSLSKVNMTHLAPR
Trigger: CCTGGGTGCCAAGTGAGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGTCTTTATTATGTAAAGTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp ATGGTGCTGTTTGGGAAGATTATAGAACTTTTAGGAGGTGGAACCTaGCTAGAGGAAAGATGTCACTGTGTGAGGGCTTTGAGTTCTCAT +
Preference number: 1 (lower is better)
Translates to: MVLFGKIIELLGGGT*LEERCHCVRALSSH
Trigger: ATGAGAACTCAAAGCCCTCACACAGTGACATCTTTCCTCTAGGCAGGTTCCACCTCCTAAAAGTTCTATAATCTTCCCAAACAGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 90 bp GTGGATTCCTTTCCTGTAAGAACTTTAAATAATGAGCCATTAAATTaGGATAGGCGTGTGGTGTTTCTCACGCAAGTGTGGGAAGATGGC +
Preference number: 1 (lower is better)
Translates to: VDSFPVRTLNNEPLN*DRRVVFLTQVWEDG
Trigger: GCCATCTTCCCACACTTGCGTGAGAAACACCACACGCCTATCCCAATTTAATGGCTCATTATTTAAAGTTCTTACAGGAAAGGAATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 90 bp TTAATATGGGGTTGCATATACAGTGGTGGGCAGGAAACCACGAAGTaGTCCTTCTGTATCTCGTTACATAGATTTTTCTGGAGTTTATTT +
Preference number: 1 (lower is better)
Translates to: LIWGCIYSGGQETTK*SFCISLHRFFWSLF
Trigger: AAATAAACTCCAGAAAAATCTATGTAACGAGATACAGAAGGAGCACTTCGTGGTTTCCTGCCCACCACTGTATATGCAACCCCATATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 90 bp GCAATACAGACAGCACACCAAGGGCTGTCATCACCACAGTCACAATaGAGTCACGAGTACAAAATAAAAATGTACATGCTACATAATTAT +
Preference number: 1 (lower is better)
Translates to: AIQTAHQGLSSPQSQ*SHEYKIKMYMLHNY
Trigger: ATAATTATGTAGCATGTACATTTTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGTGCTGTCTGTATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR GCA 90 bp ATTTTCAAACCCTTAAGTATGTGTAAATGTATCTGGATATGTACATaGATGCAGCCTCAAAGTCAAGAGGAGAGCAACAGATTGCTGTCA +
Preference number: 1 (lower is better)
Translates to: IFKPLSMCKCIWICT*MQPQSQEESNRLLS
Trigger: TGACAGCAATCTGTTGCTCTCCTCTTGACTTTGAGGCTGCATGCATGTACATATCCAGATACATTTACACATACTTAAGGGTTTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CAA 90 bp CATCTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTaGGATGGGTCTCTTTTCCTGCCACGGACCCTGTTTCGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: HLLPEVCRESTLPID*DGSLFLPRTLFRRG
Trigger: CCCTCTCCGAAACAGGGTCCGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR-3UTR TCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGCCCTCTGCCCCCAGTTaGTGGTGCTGTTTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQPSAPS*WCCLGR
Trigger: TCTTCCCAAACAGCACCATCAACTGGGGGCAGAGGG...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR TCA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTGGATCTTTGCATTCTTaGGCACAACGGCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTGSLHS*AQRPQP
Trigger: AGGCTGGGGCCGTTGTGCTCAAGAATGCAAAGATCC...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR GCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCACTGCTCCCAGAAGTCTaGAGAGAGAGCACGTTACCC +
Preference number: 2 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPLLPEV*RESTLP
Trigger: GGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCGGGGCTGAACATTCCTaGCCATTCTTTCTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPGAEHS*PFFLWH
Trigger: GTGCCAGAGAAAGAATGGCCAGGAATGTTCAGCCCC...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR TCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCCGGAGCTGTGGCAGATaGGTGGCCATATTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: CLLGCIACKYYYPARSILRSCGR*VAILEH
Trigger: GTGCTCTAATATGGCCACTCATCTGCCACAGCTCCG...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR TCA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTTTAAGGGCTGTGCCTTaGAAGATCAAGGTACGTCTG +
Preference number: 2 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTLRAVP*KIKVRL
Trigger: CAGACGTACCTTGATCTTTCAAGGCACAGCCCTTAA...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR GCA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTCTGCTCCCAGAAGTCTaGAGAGAGAGCACGTTACCC +
Preference number: 2 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTLLPEV*RESTLP
Trigger: GGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCACCCATAGATTTGGATaGGTCTCTTTTCCTGCCACG +
Preference number: 2 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSTHRFG*VSFPAT
Trigger: CGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGT...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAGGAACTTAGAAGGCTaGGAAGGGATAGAACACAGC +
Preference number: 2 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKRNLEG*EGIEHS
Trigger: GCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCT...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR TCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCCGGAGCTGTGGCAGATaGGTGGCCATATTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLRSCGR*VAILEH
Trigger: GTGCTCTAATATGGCCACTCATCTGCCACAGCTCCG...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCTGCTCCCAGAAGTCTaGAGAGAGAGCACGTTACCC +
Preference number: 2 (lower is better)
Translates to: THGIGLGAKINMAFAFSLLLPEV*RESTLP
Trigger: GGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR-3UTR CCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCGCTTTGGAGACTCCCTaGAGATCTTATCCACATTTC +
Preference number: 2 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPALETP*RSYPHF
Trigger: GAAATGTGGATAAGATCTCCAGGGAGTCTCCAAAGC...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR GCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCATCTTTCCTCCTTCCTaGTTATCTCCCTCATTCCCT +
Preference number: 2 (lower is better)
Translates to: ACKYYYPARSILVPTLPFIFPPS*LSPSFP
Trigger: AGGGAATGAGGGAGATAAGCAGGAAGGAGGAAAGAT...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCCTTGGGTGCATTGCCTaGAAATATTATTATCCAGCC +
Preference number: 2 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSLGCIA*KYYYPA
Trigger: GGCTGGATAATAATATTTGCAGGCAATGCACCCAAG...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCTGTACTTTGGATCTTTaGATTCTTGAGCACAACGGC +
Preference number: 2 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPCTLDL*ILEHNG
Trigger: GCCGTTGTGCTCAAGAATGCAAAGATCCAAAGTACA...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR GCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCTCTCCTTGGGTGCATTaGCTGCAAATATTATTATCC +
Preference number: 2 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSSPWVH*LQILLS
Trigger: GGATAATAATATTTGCAGGCAATGCACCCAAGGAGA...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCACCCATAGATTTGGATaGGTCTCTTTTCCTGCCACG +
Preference number: 2 (lower is better)
Translates to: YFPASLFYPFSWERSGTCTHRFG*VSFPAT
Trigger: CGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR-3UTR CCA 90 bp TTTAAACCAAAAGCCTTTCAGCTGGGACAGAGATGTGGTGGTTCTCATGATGACTCATTCTCGGAGCTGTaGCAGATGAGTGGCCATATT +
Preference number: 2 (lower is better)
Translates to: FKPKAFQLGQRCGGSHDDSFSEL*QMSGHI
Trigger: AATATGGCCACTCATCTGCCACAGCTCCGAGAATGA...GTCATCATGAGAACCACCACATCTCTGTCCCAGCTGAAAGGCTTTTGGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCTCATTCTCGGAGCTGTaGCAGATGAGTGGCCATATT +
Preference number: 2 (lower is better)
Translates to: YFPASLFYPFSWERSGTCSFSEL*QMSGHI
Trigger: AATATGGCCACTCATCTGCCACAGCTCCGAGAATGA...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR-3UTR GCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCAATGTTCACTGTGCTTTaGTCAGACCTTGACATACAA +
Preference number: 2 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPMFTVL*SDLDIQ
Trigger: TTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACAT...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCCATTTTGCAAGAAACTaGCTGAATGAAAAGTCCCTT +
Preference number: 2 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPHFARN*LNEKSL
Trigger: AAGGGACTTTTCATTCAGGCAGTTTCTTGCAAAATG...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCACCCATAGATTTGGATaGGTCTCTTTTCCTGCCACG +
Preference number: 2 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLTHRFG*VSFPAT
Trigger: CGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGT...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGTTTTATCCTTTTAGCTaGGAAAGATCAGGAACTTGC +
Preference number: 2 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKFYPFS*ERSGTC
Trigger: GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAA...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTTTTATCCTTTTAGCTaGGAAAGATCAGGAACTTGC +
Preference number: 2 (lower is better)
Translates to: ACKYYYPARSILVPTLPFFYPFS*ERSGTC
Trigger: GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAA...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR TCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCAAACATCTTCTCTATTaGAAGAGTCTCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: CLLGCIACKYYYPARSILKHLLY*KSLFSI
Trigger: GATGCTGAAGAGACTCTTTCAATAGAGAAGATGTTT...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAATCTCCTTGGGTGCATTaGCTGCAAATATTATTATCC +
Preference number: 2 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKSPWVH*LQILLS
Trigger: GGATAATAATATTTGCAGGCAATGCACCCAAGGAGA...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAACTGTGTCTCCTTGGGTaGATTGCCTGCAAATATTAT +
Preference number: 2 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKLCLLG*IACKYY
Trigger: ATAATATTTGCAGGCAATGCACCCAAGGAGACACAG...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAATATCTTTGTAGCCAATaGTGTGAGTGTGTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKYLCSQ*CECVFG
Trigger: CCCAAACACACACTCACACCATTGGCTACAAAGATA...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR GCA 90 bp TTTAAACCAAAAGCCTTTCAGCTGGGACAGAGATGTGGTGGTTCTCATGATGACATATGTACATATGCATaGATGGCTTTCAAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: FKPKAFQLGQRCGGSHDDICTYA*MAFKRL
Trigger: CAGCCTTTTGAAAGCCATGCATGCATATGTACATAT...GTCATCATGAGAACCACCACATCTCTGTCCCAGCTGAAAGGCTTTTGGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCAATACTATACATAGTTaGCATTACACATGGGATAGG +
Preference number: 2 (lower is better)
Translates to: CLLGCIACKYYYPARSILNTIHS*HYTWDR
Trigger: CCTATCCCATGTGTAATGCCAACTATGTATAGTATT...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAAACATCTTCTCTATTaGAAGAGTCTCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: GITHGIGLGAKINMAFAFKHLLY*KSLFSI
Trigger: GATGCTGAAGAGACTCTTTCAATAGAGAAGATGTTT...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR-3UTR CCA 90 bp TTTAAACCAAAAGCCTTTCAGCTGGGACAGAGATGTGGTGGTTCTCATGATGACAATACTATACATAGTTaGCATTACACATGGGATAGG +
Preference number: 2 (lower is better)
Translates to: FKPKAFQLGQRCGGSHDDNTIHS*HYTWDR
Trigger: CCTATCCCATGTGTAATGCCAACTATGTATAGTATT...GTCATCATGAGAACCACCACATCTCTGTCCCAGCTGAAAGGCTTTTGGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CAA 90 bp TCTAGAGACCTACGGCATCTGGTTGCAATAGAAATGCTATTTCTATaGTCTTTAACAATAAGTAAGAAAGAGATGTCTGTTCTAAGCTCC +
Preference number: 2 (lower is better)
Translates to: SRDLRHLVAIEMLFL*SLTISKKEMSVLSS
Trigger: GGAGCTTAGAACAGACATCTCTTTCTTACTTATTGTTAAAGACAATAGAAATAGCATTTCTATTGCAACCAGATGCCGTAGGTCTCTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp CCTGATCCCACTTCCAGACTGCTGAGGTGGTGGGTGTaGTGGGCTGGCTTCATGCTCCTACAGCCGTGCTCT +
Preference number: 3 (lower is better)
Translates to: PDPTSRLLRWWV*WAGFMLLQPCS
Trigger: AGAGCACGGCTGTAGGAGCATGAAGCCAGCCCATCACACCCACCACCTCAGCAGTCTGGAAGTGGGATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp ACTTACTGCTCCACTCACCTGCGAATAACTCCCACATaGCTCCCTCCACACTGGCTGCTGCTGTACTCTCTC +
Preference number: 3 (lower is better)
Translates to: TYCSTHLRITPT*LPPHWLLLYSL
Trigger: GAGAGAGTACAGCAGCAGCCAGTGTGGAGGGAGGCATGTGGGAGTTATTCGCAGGTGAGTGGAGCAGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp CTACTGTGGAGGATCTCCTTACAAGGTCAAGCCCCATaGCTCCCAAGAGGCACCAATGAAGTGGGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: LLWRISLQGQAP*LPRGTNEVGQS
Trigger: GCTTTGGCCCACTTCATTGGTGCCTCTTGGGAGCCATGGGGCTTGACCTTGTAAGGAGATCCTCCACAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp CGGAACCCAAGGGACGGGACTTTGTATGCCCCACTCTaGCCTTCCGCTATGAAGAACGGAGAAGCAGAAATA +
Preference number: 3 (lower is better)
Translates to: RNPRDGTLYAPL*PSAMKNGEAEI
Trigger: TATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCAGAGTGGGGCATACAAAGTCCCGTCCCTTGGGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp TCCGTTCCACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCCTCAGAAACAGAAATaGGGTCCCGGGTTATTGTTA +
Preference number: 3 (lower is better)
Translates to: SVPLSGGGLHHQHRLCSIPQKQK*GPGLLL
Trigger: TAACAATAACCCGGGACCCAATTTCTGTTTCTGAGG...GATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTGGAACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
3UTR TCA 72 bp ATGTCCCATCCTAGACGCCTCTTGTCTTCCCTCTACTaGACTCTGCTCTGCTTTGGAGACTCCCTGGAGATC +
Preference number: 3 (lower is better)
Translates to: MSHPRRLLSSLY*TLLCFGDSLEI
Trigger: GATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAAGAGGCGTCTAGGATGGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp ATGAAGTGGGCCAAAGCTCAGTGTACTTTGGATCTTTaGATTCTTGAGCACAACGGCCCCAGCCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: MKWAKAQCTLDL*ILEHNGPSLSW
Trigger: CCAGGAGAGGCTGGGGCCGTTGTGCTCAAGAATGCAAAGATCCAAAGTACACTGAGCTTTGGCCCACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp GTATTTTCTCCCAACACAGACCTCTCTGAGGTGCCCTaGACAAATCACAAAGGCCCTGACTTCCCTTGGCGT +
Preference number: 3 (lower is better)
Translates to: VFSPNTDLSEVP*TNHKGPDFPWR
Trigger: ACGCCAAGGGAAGTCAGGGCCTTTGTGATTTGTGCAGGGCACCTCAGAGAGGTCTGTGTTGGGAGAAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp AGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATaGGTCTCTTTTCCTGCCACGGACCCTGTTTCGGAG +
Preference number: 3 (lower is better)
Translates to: SLQREHVTHRFG*VSFPATDPVSE
Trigger: CTCCGAAACAGGGTCCGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR CCA 72 bp GTGCCCTGCACAAATCACAAAGGCCCTGACTTCCCTTaGCGTTTCTTCCTTTCCTCCGTAGGTGATGCTTAC +
Preference number: 3 (lower is better)
Translates to: VPCTNHKGPDFP*RFFLSSVGDAY
Trigger: GTAAGCATCACCTACGGAGGAAAGGAAGAAACGCCAAGGGAAGTCAGGGCCTTTGTGATTTGTGCAGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp CACCTGCGAATAACTCCCACATGCCTCCCTCCACACTaGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: HLRITPTCLPPH*LLLYSLSSLCV
Trigger: TACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGGGAGGCATGTGGGAGTTATTCGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCGTGAACATGACTCACTaGGCACCCAGGTCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPVNMTH*APRSEN
Trigger: GTTCTCTGACCTGGGTGCCAAGTGAGTCATGTTCAC...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp GGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCTCCTCATCGGGTTATTGTTAGGTaGGCTGAAAGAGTGCAAAAC +
Preference number: 3 (lower is better)
Translates to: GGGLHHQHRLCSILIPPHRVIVR*AERVQN
Trigger: GTTTTGCACTCTTTCAGCCAACCTAACAATAACCCG...ATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
3UTR TCA 72 bp ACAAGGTCAAGCCCCATGGCTCCCAAGAGGCACCAATaGAGTGGGCCAAAGCTCAGTGTACTTTGGATCTTT +
Preference number: 3 (lower is better)
Translates to: TRSSPMAPKRHQ*SGPKLSVLWIF
Trigger: AAAGATCCAAAGTACACTGAGCTTTGGCCCACTTCATTGGTGCCTCTTGGGAGCCATGGGGCTTGACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp GCCTCTCCTGGTGCTGAGCTTCCAAGACGTCCATGTTaGCTTGTTATACCATGCAAATCCCTCTGGCTTGAT +
Preference number: 3 (lower is better)
Translates to: ASPGAELPRRPC*LVIPCKSLWLD
Trigger: ATCAAGCCAGAGGGATTTGCATGGTATAACAAGGCAACATGGACGTCTTGGAAGCTCAGCACCAGGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp ATGCTAATTGGTGAAAGGGAGACGTGTCTCTCTGAATaGAAGCAGGCAGAGGGCCAGATCTGCATGCTATGG +
Preference number: 3 (lower is better)
Translates to: MLIGERETCLSE*KQAEGQICMLW
Trigger: CCATAGCATGCAGATCTGGCCCTCTGCCTGCTTGCATTCAGAGAGACACGTCTCCCTTTCACCAATTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp CCGCAGAACTGGGCACCGGCTCTAGCTTTCACGCAATaGACAGACCCTACGTGTTTCTGTCTTTTACAACTT +
Preference number: 3 (lower is better)
Translates to: PQNWAPALAFTQ*TDPTCFCLLQL
Trigger: AAGTTGTAAAAGACAGAAACACGTAGGGTCTGTGCATTGCGTGAAAGCTAGAGCCGGTGCCCAGTTCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp GTCAAGCCCCATGGCTCCCAAGAGGCACCAATGAAGTaGGCCAAAGCTCAGTGTACTTTGGATCTTTGCATT +
Preference number: 3 (lower is better)
Translates to: VKPHGSQEAPMK*AKAQCTLDLCI
Trigger: AATGCAAAGATCCAAAGTACACTGAGCTTTGGCCCACTTCATTGGTGCCTCTTGGGAGCCATGGGGCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGGTACATAGAGAAAAGTaGAGCCTTGTGGGGAGGGTT +
Preference number: 3 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLVHREK*SLVGRV
Trigger: AACCCTCCCCACAAGGCTCAACTTTTCTCTATGTAC...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp GTCCTAAAGGGTCTGCAGCTTGTGGTTGTTTGGATGTaGATTGTCTCCCATAGGTCCACGTACCAGAACCCT +
Preference number: 3 (lower is better)
Translates to: VLKGLQLVVVWM*IVSHRSTYQNP
Trigger: AGGGTTCTGGTACGTGGACCTATGGGAGACAATTCACATCCAAACAACCACAAGCTGCAGACCCTTTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp AGGACCCACACAGTCTCTCACTCTATAAAAACTCAATaGTGCACGTCGGTCCTAAAGGGTCTGCAGCTTGTG +
Preference number: 3 (lower is better)
Translates to: RTHTVSHSIKTQ*CTSVLKGLQLV
Trigger: CACAAGCTGCAGACCCTTTAGGACCGACGTGCAGCATTGAGTTTTTATAGAGTGAGAGACTGTGTGGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp ATCCTAGACGCCTCTTGTCTTCCCTCTACTGAACTCTaGTCTGCTTTGGAGACTCCCTGGAGATCTTATCCA +
Preference number: 3 (lower is better)
Translates to: ILDASCLPSTEL*SALETPWRSYP
Trigger: TGGATAAGATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAAGAGGCGTCTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp ACTCAAGGGGCTGAACATTCCTGGCCATTCTTTCTCTaGCACCTGATTCTGATCCAAAGGATGTCCCATCCT +
Preference number: 3 (lower is better)
Translates to: TQGAEHSWPFFL*HLILIQRMSHP
Trigger: AGGATGGGACATCCTTTGGATCAGAATCAGGTGCCAGAGAAAGAATGGCCAGGAATGTTCAGCCCCTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp TTTGAGGATTCTCAAGGAACCAGACTTCTATTGACCTaGGTCCCTGGATTCCTCTTTGGGGTGCAAAAGCCC +
Preference number: 3 (lower is better)
Translates to: FEDSQGTRLLLT*VPGFLFGVQKP
Trigger: GGGCTTTTGCACCCCAAAGAGGAATCCAGGGACCCAGGTCAATAGAAGTCTGGTTCCTTGAGAATCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGACCCGGTTAAAGCTGTaGTTACATGTACGACAGACG +
Preference number: 3 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKTRLKL*LHVRQT
Trigger: CGTCTGTCGTACATGTAACAACAGCTTTAACCGGGT...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp TGTGCGTGTTGGAGTGGATATGTCTGCCCCCTCTCCTaGATCCTGCATTTACAAACTAGCAAACTTCCCATG +
Preference number: 3 (lower is better)
Translates to: CACWSGYVCPLS*ILHLQTSKLPM
Trigger: CATGGGAAGTTTGCTAGTTTGTAAATGCAGGATTCAGGAGAGGGGGCAGACATATCCACTCCAACACGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp CCTTCTTTGAGGATTCTCAAGGAACCAGACTTCTATTaGCCTGGGTCCCTGGATTCCTCTTTGGGGTGCAAA +
Preference number: 3 (lower is better)
Translates to: PSLRILKEPDFY*PGSLDSSLGCK
Trigger: TTTGCACCCCAAAGAGGAATCCAGGGACCCAGGTCAATAGAAGTCTGGTTCCTTGAGAATCCTCAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp ACCCACACAGTCTCTCACTCTATAAAAACTCAATGCTaGACGTCGGTCCTAAAGGGTCTGCAGCTTGTGGTT +
Preference number: 3 (lower is better)
Translates to: THTVSHSIKTQC*TSVLKGLQLVV
Trigger: AACCACAAGCTGCAGACCCTTTAGGACCGACGTGCAGCATTGAGTTTTTATAGAGTGAGAGACTGTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp CCCTCTACTGAACTCTGCTCTGCTTTGGAGACTCCCTaGAGATCTTATCCACATTTCCTGTGGATTCCTTTC +
Preference number: 3 (lower is better)
Translates to: PSTELCSALETP*RSYPHFLWIPF
Trigger: GAAAGGAATCCACAGGAAATGTGGATAAGATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCGTCTCCTTGGGTGCATaGCCTGCAAATATTATTATC +
Preference number: 3 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSVSLGA*PANIII
Trigger: GATAATAATATTTGCAGGCAATGCACCCAAGGAGAC...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp CATATGTGCCTGGGGGTGTGTATGTGTGTGTGTGCGTaGATATATACATATACATATGTGTGTGTGCGCGCG +
Preference number: 3 (lower is better)
Translates to: HMCLGVCMCVCA*IYTYTYVCVRA
Trigger: CGCGCGCACACACACATATGTATATGTATATATTCACGCACACACACACATACACACCCCCAGGCACATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCAAGAGATGAACCTTTCTaGAATCTTACAGAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPRDEPF*NLTEWL
Trigger: CAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCT...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp CGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTaGCATACAAAGGTTCATATGTGTCCTTGTCATGAG +
Preference number: 3 (lower is better)
Translates to: RALHVHCALLRP*HTKVHMCPCHE
Trigger: CTCATGACAAGGACACATATGAACCTTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp ATGTTGCCTTGTTATACCATGCAAATCCCTCTGGCTTaGTGCTCCTTAGTGCAACTCAAGGGGCTGAACATT +
Preference number: 3 (lower is better)
Translates to: MLPCYTMQIPLA*CSLVQLKGLNI
Trigger: AATGTTCAGCCCCTTGAGTTGCACTAAGGAGCATCAAGCCAGAGGGATTTGCATGGTATAACAAGGCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp GCGTGCACATGTGCGCACACATGTTCCTGTGTGTCTTaGTCAATCTGTAGGTCTGTGTATGAATTCATGTGT +
Preference number: 3 (lower is better)
Translates to: ACTCAHTCSCVS*SICRSVYEFMC
Trigger: ACACATGAATTCATACACAGACCTACAGATTGATCAAGACACACAGGAACATGTGTGCGCACATGTGCACGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp GACTCCTCTGGAAGAGCAGTATATATCCTTAACCACTaGGCAACATCTCCAGCCTCCTTTTCTGGGATTAAG +
Preference number: 3 (lower is better)
Translates to: DSSGRAVYILNH*ATSPASFSGIK
Trigger: CTTAATCCCAGAAAAGGAGGCTGGAGATGTTGCTCAGTGGTTAAGGATATATACTGCTCTTCCAGAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp GTCCTTGTCATGAGAACTGTGTCTCCTTGGGTGCATTaGCTGCAAATATTATTATCCAGCCAGAAGCATCCT +
Preference number: 3 (lower is better)
Translates to: VLVMRTVSPWVH*LQILLSSQKHP
Trigger: AGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACACAGTTCTCATGACAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR GCA 72 bp GGTTGCATATACAGTGGTGGGCAGGAAACCACGAAGTaGTCCTTCTGTATCTCGTTACATAGATTTTTCTGG +
Preference number: 3 (lower is better)
Translates to: GCIYSGGQETTK*SFCISLHRFFW
Trigger: CCAGAAAAATCTATGTAACGAGATACAGAAGGAGCACTTCGTGGTTTCCTGCCCACCACTGTATATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGTGCTTTGCTCAGACCTaGACATACAAAGGTTCATAT +
Preference number: 3 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQCFAQT*TYKGSY
Trigger: ATATGAACCTTTGTATGTCAAGGTCTGAGCAAAGCA...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR-3UTR CAA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCATGCTTTGCTCAGACCTaGACATACAAAGGTTCATAT +
Preference number: 3 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPCFAQT*TYKGSY
Trigger: ATATGAACCTTTGTATGTCAAGGTCTGAGCAAAGCA...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR-3UTR CAA 90 bp TTTAAACCAAAAGCCTTTCAGCTGGGACAGAGATGTGGTGGTTCTCATGATGACTCAGACTCTTCTATCTaGTCTTTCCCAACGAAGGAC +
Preference number: 3 (lower is better)
Translates to: FKPKAFQLGQRCGGSHDDSDSSI*SFPTKD
Trigger: GTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGA...GTCATCATGAGAACCACCACATCTCTGTCCCAGCTGAAAGGCTTTTGGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp TTCCTTTCCTCCGTAGGTGATGCTTACGGTATTCCCTaGGAACACTGCTGTGAATTAATGGTGTATTTCTGG +
Preference number: 3 (lower is better)
Translates to: FLSSVGDAYGIP*EHCCELMVYFW
Trigger: CCAGAAATACACCATTAATTCACAGCAGTGTTCTCAGGGAATACCGTAAGCATCACCTACGGAGGAAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR GCA 72 bp TTTGGGAAGATTATAGAACTTTTAGGAGGTGGAACCTaGCTAGAGGAAAGATGTCACTGTGTGAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: FGKIIELLGGGT*LEERCHCVRAL
Trigger: CAAAGCCCTCACACAGTGACATCTTTCCTCTAGGCAGGTTCCACCTCCTAAAAGTTCTATAATCTTCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp TACATAATAAAGACATGTGGGAATGTGGGCAGTAGGTaGCGCTCTCTTAGCAAAGTGAACATGACTCACTTG +
Preference number: 3 (lower is better)
Translates to: YIIKTCGNVGSR*RSLSKVNMTHL
Trigger: CAAGTGAGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGTCTTTATTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp TTGTTTTTGAGCCATATATTTTCATTCTCGGAGCTGTaGCAGATGAGTGGCCATATTAGAGCACAACTGTGG +
Preference number: 3 (lower is better)
Translates to: LFLSHIFSFSEL*QMSGHIRAQLW
Trigger: CCACAGTTGTGCTCTAATATGGCCACTCATCTGCCACAGCTCCGAGAATGAAAATATATGGCTCAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR TCA 72 bp ATGGTGTATTTCTGGATTCTCCAACTTCACAACCCCTaGAACATTCGCATGGATCATTTTGCAAGAAACTGC +
Preference number: 3 (lower is better)
Translates to: MVYFWILQLHNP*NIRMDHFARNC
Trigger: GCAGTTTCTTGCAAAATGATCCATGCGAATGTTTCAGGGGTTGTGAAGTTGGAGAATCCAGAAATACACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CCA 72 bp AACACCAATCAGACCATAGAAACTCTGAATGTATATTaGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAA +
Preference number: 3 (lower is better)
Translates to: NTNQTIETLNVY*PRNLEGWEGIE
Trigger: TTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCAATATACATTCAGAGTTTCTATGGTCTGATTGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR CCA 72 bp TTTCCTGTAAGAACTTTAAATAATGAGCCATTAAATTaGGATAGGCGTGTGGTGTTTCTCACGCAAGTGTGG +
Preference number: 3 (lower is better)
Translates to: FPVRTLNNEPLN*DRRVVFLTQVW
Trigger: CCACACTTGCGTGAGAAACACCACACGCCTATCCCAATTTAATGGCTCATTATTTAAAGTTCTTACAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR TCA 72 bp TTAGCATACAATGCGTATCTGACAGATCATGAGAGATaGACCTTTCTTGAATCTTACAGAGTGGCTGTCATA +
Preference number: 3 (lower is better)
Translates to: LAYNAYLTDHER*TFLESYRVAVI
Trigger: TATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGATCTGTCAGATACGCATTGTATGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR TCA 72 bp TACACTGATATTTTAGTAGGACATGACTTTAAACTCTaGGTCGTAATTCTAGAGACCTACGGCATCTGGTTG +
Preference number: 3 (lower is better)
Translates to: YTDILVGHDFKL*VVILETYGIWL
Trigger: CAACCAGATGCCGTAGGTCTCTAGAATTACGACTCAGAGTTTAAAGTCATGTCCTACTAAAATATCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp CAACGGCCCCAGCCTCTCCTGGTGCTGAGCTTCCAAGACGTCCATGTTGCCTTGTTCCAGAAGACCCACTaGGACACTGGGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QRPQPLLVLSFQDVHVALFQKTH*DTGFHL
Trigger: CAGATGGAACCCAGTGTCCCAGTGGGTCTTCTGGAA...CAAGGCAACATGGACGTCTTGGAAGCTCAGCACCAGGAGAGGCTGGGGCCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp GGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCTCCTCATGTGTCAGCGTGGGATTaGTACCTGGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGLHHQHRLCSILIPPHVSAWD*YLAAPG
Trigger: CCCAGGAGCAGCCAGGTACCAATCCCACGCTGACAC...ATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR TCA 90 bp TCCGTTCCACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCTGGCTCCATAGGCACTaGCGAACTCGCATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVPLSGGGLHHQHRLCSIWLHRH*RTRMCR
Trigger: TCTACACATGCGAGTTCGTCAGTGCCTATGGAGCCA...GATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTGGAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CCA 90 bp TCCGTTCCACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCTTCCAGAAGACCCACTaGGACACTGGGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SVPLSGGGLHHQHRLCSIFQKTH*DTGFHL
Trigger: CAGATGGAACCCAGTGTCCCAGTGGGTCTTCTGGAA...GATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTGGAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTAGGGTGGGCGAGGAATaGAGGAGTGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSRVGEE*RSAVSQ
Trigger: CTGGGAGACAGCACTCCTCCATTCCTCGCCCACCCT...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGCAGCGGGTGAACGGTaGCATCTTTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSAAGER*HLWWQC
Trigger: GCATTGCCACCAAAGATGTCACCGTTCACCCGCTGC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGGCCCCAAGAGTGGTGTaGGGACCCCGATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKAPRVV*GPRYSC
Trigger: GCAAGAGTATCGGGGTCCTCACACCACTCTTGGGGC...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCTCCTCATTTCCCGGTGGTGCTCTaGACTGTACTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: GGGLHHQHRLCSILIPPHFPVVL*TVLTSI
Trigger: GATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAA...ATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCCCAGCTGGAGGGCTTaGGAAAACCTTTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSPSWRA*ENLSTE
Trigger: CTCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCCCACGCTGCCCTTGGTaGACTGTGTCACAGTCACCG +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFPRCPW*TVSQSP
Trigger: CGGTGACTGTGACACAGTTCACCAAGGGCAGCGTGG...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGTATGTAGGGAGCTTCTaGTCCTGGGTGGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLYVGSF*SWVGLL
Trigger: CAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATA...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCCCCAGCTGGAGGGCTTaGGAAAACCTTTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSPSWRA*ENLSTE
Trigger: CTCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGG...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGGTGCTGTCTCCCAGCTaGAGGGCTTGGGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLVLSPS*RAWENL
Trigger: AAGGTTTTCCCAAGCCCTCCAGCTGGGAGACAGCAC...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCAGGGTGGGCGAGGAATaGAGGAGTGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFRVGEE*RSAVSQ
Trigger: CTGGGAGACAGCACTCCTCCATTCCTCGCCCACCCT...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGCAGCGGGTGAACGGTaGCATCTTTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFAAGER*HLWWQC
Trigger: GCATTGCCACCAAAGATGTCACCGTTCACCCGCTGC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCCCCGATACTCTTGCTaGTCTGGAATAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSPRYSC*SGIGCS
Trigger: AGAGCAGCCTATTCCAGATCAGCAAGAGTATCGGGG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTTCCCGGTGGTGCTCTaGACTGTACTCACTTCCATC +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSFPVVL*TVLTSI
Trigger: GATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp TCCGTTCCACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCAATACTGCTCCAGTTTaGAATATTCTCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVPLSGGGLHHQHRLCSINTAPV*NILAAA
Trigger: TGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATT...GATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGTGGAACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR GCA 90 bp ACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCCTGGGTTCCCTAGAATaGTTATCTTCCCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TLGWRSSPSAPTLLHPDTLGSLE*LSSLPV
Trigger: AACAGGAAGGGAAGATAAGCATTCTAGGGAACCCAG...GGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR GCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTGCTCTTCTCTTGCTTaGCTGGCTTGTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSCSSLA*LACPQW
Trigger: CCATTGGGGACAAGCCAGGCAAGCAAGAGAAGAGCA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTTCCAGAAGACCCACTaGGACACTGGGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSFQKTH*DTGFHL
Trigger: CAGATGGAACCCAGTGTCCCAGTGGGTCTTCTGGAA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGCTGAGGTTGTTCAAGTaGGCTCTGATGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKLRLFK*ALMDSR
Trigger: CCTGGAGTCCATCAGAGCTCACTTGAACAACCTCAG...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CAACGGCCCCAGCCTCTCCTGGTGCTGAGCTTCCAAGACGTCCATGTTGCCTTGTTCTTTAGGTCTTCTTaGAATCCTATGTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: QRPQPLLVLSFQDVHVALFFRSS*NPMFSL
Trigger: CAGACTGAACATAGGATTTCAAGAAGACCTAAAGAA...CAAGGCAACATGGACGTCTTGGAAGCTCAGCACCAGGAGAGGCTGGGGCCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp TTTAAACCAAAAGCCTTTCAGCTGGGACAGAGATGTGGTGGTTCTCATGATGACCCACGCTGCCCTTGGTaGACTGTGTCACAGTCACCG +
Preference number: 4 (lower is better)
Translates to: FKPKAFQLGQRCGGSHDDPRCPW*TVSQSP
Trigger: CGGTGACTGTGACACAGTTCACCAAGGGCAGCGTGG...GTCATCATGAGAACCACCACATCTCTGTCCCAGCTGAAAGGCTTTTGGTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCCAAAGGATCCATCATaGTGTCTGACACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSPKDPS*CLTPEA
Trigger: TGCCTCTGGTGTCAGACATCATGATGGATCCTTTGG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCAGATGGGCTCCGGACTaGGCTGTTGGCTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILRWAPD*AVGCIG
Trigger: ACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCT...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGAACTGGCACAGCTTCTaGATGACTTTCCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLNWHSF*MTFPGS
Trigger: GGATCCTGGGAAAGTCATTCAGAAGCTGTGCCAGTT...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTAACTGGCACAGCTTCTaGATGACTTTCCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSNWHSF*MTFPGS
Trigger: GGATCCTGGGAAAGTCATTCAGAAGCTGTGCCAGTT...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGCCTGGAGCAAACCATTaGTTGGAGCTGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKPGANH*LELRCR
Trigger: CCTGCATCTCAGCTCCAATCAATGGTTTGCTCCAGG...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCCAGGCTTCCTGGAGATaGGCGGATGTCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFQASWR*ADVLFF
Trigger: GAAGAACAGGACATCCGCTCATCTCCAGGAAGCCTG...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGGCAAAAGGCAATGTTaGCTATGCAGATGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSGKRQC*LCRCGA
Trigger: TGCGCCACATCTGCATAGTCAACATTGCCTTTTGCC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGAGCCAAAGAGCAAAATaGAGAGCCCCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLSQRAK*RAPGRH
Trigger: ATGCCTTCCAGGGGCTCTTCATTTTGCTCTTTGGCT...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTAGCCAAAGAGCAAAATaGAGAGCCCCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSSQRAK*RAPGRH
Trigger: ATGCCTTCCAGGGGCTCTTCATTTTGCTCTTTGGCT...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTGTGGAACACAGCATTaGTTCCCTGGATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSCGTQH*FPGSLW
Trigger: CCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGAATGCTTCTGGGAGCTaGCAGAAAGGTCCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQNASGS*QKGPWG
Trigger: TCCCCAGGGACCTTTCTGCCAGCTCCCAGAAGCATT...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGTTCCAGAAGACCCACTaGGACACTGGGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKFQKTH*DTGFHL
Trigger: CAGATGGAACCCAGTGTCCCAGTGGGTCTTCTGGAA...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGGATGAGGAGTCCACGTaGAAAGTCACAGCGTACTCT +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLDEEST*KVTAYS
Trigger: AGAGTACGCTGTGACTTTCCACGTGGACTCCTCATC...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGATGAGGAGTCCACGTaGAAAGTCACAGCGTACTCT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSDEEST*KVTAYS
Trigger: AGAGTACGCTGTGACTTTCCACGTGGACTCCTCATC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGCTGCATTGGTGAAGTaGCAGAACACTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSAALVK*QNTAMS
Trigger: AGACATCGCAGTGTTCTGCCACTTCACCAATGCAGC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGGGAGCTTCTGGTCCTaGGTGGGGCTCTTGATCAAA +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFGSFWS*VGLLIK
Trigger: TTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCCCCAGCTGGAGGGCTTaGGAAAACCTTTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILPSWRA*ENLSTE
Trigger: CTCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGG...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGCTGACACTCATCAATaGCTACATCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSADTHQ*LHHPTG
Trigger: ACCTGTGGGGTGATGTAGCCATTGATGAGTGTCAGC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCCTAGGCTGTTCCCGGTaGTGCTCTGAACTGTACTCA +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSLGCSR*CSELYS
Trigger: TGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAG...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
3UTR CAA 72 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTaGGATGGGTCTCTTTTCCTGCCACGGACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPID*DGSLFLPRTLF
Trigger: AAACAGGGTCCGTGGCAGGAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR CAA 72 bp CTCCTGGTGCTGAGCTTCCAAGACGTCCATGTTGCCTaGTTATACCATGCAAATCCCTCTGGCTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: LLVLSFQDVHVA*LYHANPSGLML
Trigger: GAGCATCAAGCCAGAGGGATTTGCATGGTATAACAAGGCAACATGGACGTCTTGGAAGCTCAGCACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTGGCTCCATAGGCACTaGCGAACTCGCATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFWLHRH*RTRMCR
Trigger: TCTACACATGCGAGTTCGTCAGTGCCTATGGAGCCA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCATGGCTCCATAGGCACTaGCGAACTCGCATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPWLHRH*RTRMCR
Trigger: TCTACACATGCGAGTTCGTCAGTGCCTATGGAGCCA...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAACCAGAGGCAGCGGGTaGACGGTGACATCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKTRGSG*TVTSLV
Trigger: CACCAAAGATGTCACCGTTCACCCGCTGCCTCTGGT...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCACCAGAGGCAGCGGGTaGACGGTGACATCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCTRGSG*TVTSLV
Trigger: CACCAAAGATGTCACCGTTCACCCGCTGCCTCTGGT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGACAGGCAGCTAAGCTaGCTATGGAAAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFDRQLS*LWKTPT
Trigger: GGTTGGGGTTTTCCATAGTCAGCTTAGCTGCCTGTC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCGGCAAAAGGCAATGTTaGCTATGCAGATGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSGKRQC*LCRCGA
Trigger: TGCGCCACATCTGCATAGTCAACATTGCCTTTTGCC...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGCCCCAAGAGTGGTGTaGGGACCCCGATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLAPRVV*GPRYSC
Trigger: GCAAGAGTATCGGGGTCCTCACACCACTCTTGGGGC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGCCCCAAGAGTGGTGTaGGGACCCCGATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFAPRVV*GPRYSC
Trigger: GCAAGAGTATCGGGGTCCTCACACCACTCTTGGGGC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCAGCGTACTCTTCCCCTaGATCCTCTTCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFSVLFP*ILFYAA
Trigger: TGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCT...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGGGAGCTTCTGGTCCTaGGTGGGGCTCTTGATCAAA +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILGSFWS*VGLLIK
Trigger: TTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCC...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGGCTGACACTCATCAATaGCTACATCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKADTHQ*LHHPTG
Trigger: ACCTGTGGGGTGATGTAGCCATTGATGAGTGTCAGC...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTTCCCTGGATCACTGTaGCAAGACCGAAACCCCAAG +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFFPGSL*QDRNPK
Trigger: CTTGGGGTTTCGGTCTTGCCACAGTGATCCAGGGAA...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCAGGGTTATTGTTAGGTTaGCTGGCTGCTCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPGLLLG*LAAPGV
Trigger: AACCCCAGGAGCAGCCAGCCAACCTAACAATAACCC...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
3UTR CAA 72 bp GCCTCTTGTCTTCCCTCTACTGAACTCTGCTCTGCTTaGGAGACTCCCTGGAGATCTTATCCACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASCLPSTELCSA*ETPWRSYPHFL
Trigger: CAGGAAATGTGGATAAGATCTCCAGGGAGTCTCCAAAGCAGAGCAGAGTTCAGTAGAGGGAAGACAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTGGAGAATTGAAGGTTaGACAATGGGCTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSWRIEG*TMGSVG
Trigger: ACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGCAGCGGGTGAACGGTaGCATCTTTGGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFAAGER*HLWWQC
Trigger: GCATTGCCACCAAAGATGTCACCGTTCACCCGCTGC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCTGTTGGCTGCATTGGTaGAGTGGCAGAACACTGCGA +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILCWLHW*SGRTLR
Trigger: TCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACA...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGAGATGGGCTCCGGACTaGGCTGTTGGCTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLRWAPD*AVGCIG
Trigger: ACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCT...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGATGGGCTCCGGACTaGGCTGTTGGCTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFRWAPD*AVGCIG
Trigger: ACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCT...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCCACACATTTGTAAGTaGCAGTCCCGCCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCPHICK*QSRRWP
Trigger: AGGCCATCGGCGGGACTGTCACTTACAAATGTGTGG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAACAGGCTTCCTGGAGATaGGCGGATGTCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKQASWR*ADVLFF
Trigger: GAAGAACAGGACATCCGCTCATCTCCAGGAAGCCTG...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCAGGCTTCCTGGAGATaGGCGGATGTCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCQASWR*ADVLFF
Trigger: GAAGAACAGGACATCCGCTCATCTCCAGGAAGCCTG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCACAGCTATGTTCTTACTaGCTCTGGCTCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPQLCSY*LWLHRH
Trigger: GTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTG...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCTGCTCTTCTCTTGCTTaGCTGGCTTGTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILCSSLA*LACPQW
Trigger: CCATTGGGGACAAGCCAGGCAAGCAAGAGAAGAGCA...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp AAGCTTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTTGGCTCTCACTTCCATCACATaGCTTAGGACCTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: KLCPSETEIGSRVIVRLALTSIT*LRTSGT
Trigger: AGTGCCCGAGGTCCTAAGGCATGTGATGGAAGTGAG...AGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGCCTGATACCTCCTCATaGTATAAAACCTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLPDTSS*YKTLGG
Trigger: TCCACCCAAGGTTTTATACCATGAGGAGGTATCAGG...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGCTGCATTGGTGAAGTaGCAGAACACTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFAALVK*QNTAMS
Trigger: AGACATCGCAGTGTTCTGCCACTTCACCAATGCAGC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAGGGAGCTTCTGGTCCTaGGTGGGGCTCTTGATCAAA +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKGSFWS*VGLLIK
Trigger: TTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCC...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCTTCCCTGGATCACTGTaGCAAGACCGAAACCCCAAG +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILFPGSL*QDRNPK
Trigger: CTTGGGGTTTCGGTCTTGCCACAGTGATCCAGGGAA...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCACAGCATTGCTTCCCTaGATCACTGTGGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILTALLP*ITVARP
Trigger: CGGTCTTGCCACAGTGATCCAGGGAAGCAATGCTGT...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTTGGCTGAAACGTGGGATTGGTACCTaGCTGCTCCTGGGGTTTACT +
Preference number: 4 (lower is better)
Translates to: FVPQKQKLGPGLLLGWLKRGIGT*LLLGFT
Trigger: AGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACG...TTTCAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
3UTR CAA 72 bp TCTCCAGCCTCCTTTTCTGGGATTAAGGGCTGTGCCTaGAAAGATCAAGGTACGTCTGTGTATGTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: SPASFSGIKGCA*KDQGTSVYVRV
Trigger: AACACGCACATACACAGACGTACCTTGATCTTTCAAGGCACAGCCCTTAATCCCAGAAAAGGAGGCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CAA 72 bp TCCTTCTTTGAGGATTCTCAAGGAACCAGACTTCTATaGACCTGGGTCCCTGGATTCCTCTTTGGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SFFEDSQGTRLL*TWVPGFLFGVQ
Trigger: TTGCACCCCAAAGAGGAATCCAGGGACCCAGGTCAATAGAAGTCTGGTTCCTTGAGAATCCTCAAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGCTCAGCGCAGCTTCTaGAGAACAAATCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFAQRSF*RTNHKK
Trigger: CTTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCTGAGGTTGTTCAAGTaGGCTCTGATGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCLRLFK*ALMDSR
Trigger: CCTGGAGTCCATCAGAGCTCACTTGAACAACCTCAG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTCTCGAATTGGAAAACTaGGGTTGTTCAAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTLELEN*GCSSEL
Trigger: GAGCTCACTTGAACAACCTCAGTTTTCCAATTCGAG...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCTTGATGACAGTGGTGTaGATGGAGTATTTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPLMTVV*MEYLSL
Trigger: CAGCGACAAATACTCCATTCACACCACTGTCATCAA...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCCACACATTTGTAAGTaGCAGTCCCGCCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLPHICK*QSRRWP
Trigger: AGGCCATCGGCGGGACTGTCACTTACAAATGTGTGG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAACCACACATTTGTAAGTaGCAGTCCCGCCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKPHICK*QSRRWP
Trigger: AGGCCATCGGCGGGACTGTCACTTACAAATGTGTGG...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGTGCAAGTTTCCCAGCTaGCACTCATCAATGGCTACA +
Preference number: 4 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQCKFPS*HSSMAT
Trigger: TGTAGCCATTGATGAGTGTCAGCTGGGAAACTTGCA...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCCATGAGGATGGAGAATaGCGTCAGGTGGTTACACTT +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFHEDGE*RQVVTL
Trigger: AAGTGTAACCACCTGACGTCATTCTCCATCCTCATG...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTGACAGGCAGCTAAGCTaGCTATGGAAAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTDRQLS*LWKTPT
Trigger: GGTTGGGGTTTTCCATAGTCAGCTTAGCTGCCTGTC...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTCCCCGATACTCTTGCTaGTCTGGAATAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTPRYSC*SGIGCS
Trigger: AGAGCAGCCTATTCCAGATCAGCAAGAGTATCGGGG...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCCCCGATACTCTTGCTaGTCTGGAATAGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCPRYSC*SGIGCS
Trigger: AGAGCAGCCTATTCCAGATCAGCAAGAGTATCGGGG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCAGCCAAAGAGCAAAATaGAGAGCCCCTGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILSQRAK*RAPGRH
Trigger: ATGCCTTCCAGGGGCTCTTCATTTTGCTCTTTGGCT...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGTTGACTTTGAGTGTTaGGAAGACCACCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSVDFEC*EDHLDN
Trigger: ATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAAC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTAATACTGCTCCAGTTTaGAATATTCTCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSNTAPV*NILAAA
Trigger: TGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATT...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp AGGCAGGTTATAGAAAAGCTTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTCAGCTATGTTCTTACTaGCTCTGGCTCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: RQVIEKLCPSETEIGSRVQLCSY*LWLHRH
Trigger: GTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTG...AACCCGGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR GCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCCAGCTATGTTCTTACTaGCTCTGGCTCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILQLCSY*LWLHRH
Trigger: GTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTG...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAAGCGTACTCTTCCCCTaGATCCTCTTCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKSVLFP*ILFYAA
Trigger: TGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCT...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGTTCGGTCCCTCGAATTaGAAAACTGAGGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLFGPSN*KTEVVQ
Trigger: TTGAACAACCTCAGTTTTCCAATTCGAGGGACCGAA...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCTGGCAGAAAGGTCCCTaGGGAGGAAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCWQKGP*GGSPFR
Trigger: TCTGAAAGGACTTCCTCCCCAGGGACCTTTCTGCCA...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCCCTGATACCTCCTCATaGTATAAAACCTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSPDTSS*YKTLGG
Trigger: TCCACCCAAGGTTTTATACCATGAGGAGGTATCAGG...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTTATGTAGGGAGCTTCTaGTCCTGGGTGGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFYVGSF*SWVGLL
Trigger: CAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATA...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTATGTAGGGAGCTTCTaGTCCTGGGTGGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLYVGSF*SWVGLL
Trigger: CAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGTGCTGTCTCCCAGCTaGAGGGCTTGGGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLVLSPS*RAWENL
Trigger: AAGGTTTTCCCAAGCCCTCCAGCTGGGAGACAGCAC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGGCTTGACAATGTTATaGCTGACAGTGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSGLTML*LTVVVI
Trigger: AATGACAACCACTGTCAGCCATAACATTGTCAAGCC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCACAGCATTGCTTCCCTaGATCACTGTGGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCTALLP*ITVARP
Trigger: CGGTCTTGCCACAGTGATCCAGGGAAGCAATGCTGT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTTGGCTGAAACTAGGCTGTTCCCGGTaGTGCTCTGAACTGTACTCA +
Preference number: 4 (lower is better)
Translates to: FVPQKQKLGPGLLLGWLKLGCSR*CSELYS
Trigger: TGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAG...TTTCAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CCA 90 bp AGGCAGGTTATAGAAAAGCTTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTGTACCTGGCTGCTCCTaGGGTTTACTTGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: RQVIEKLCPSETEIGSRVVPGCS*GLLVSR
Trigger: CCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTAC...AACCCGGGACCCAATTTCTGTTTCTGAGGGACAAAGCTTTTCTATAACCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTGGAGAATTGAAGGTTaGACAATGGGCTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFWRIEG*TMGSVG
Trigger: ACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCCTCGAATTGGAAAACTaGGGTTGTTCAAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFLELEN*GCSSEL
Trigger: GAGCTCACTTGAACAACCTCAGTTTTCCAATTCGAG...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTCCAAAGGATCCATCATaGTGTCTGACACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTPKDPS*CLTPEA
Trigger: TGCCTCTGGTGTCAGACATCATGATGGATCCTTTGG...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGACGCAGCATTTGAATTaGTGGGAACTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQTQHLN*WELVHR
Trigger: TCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGT...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCACGCAGCATTTGAATTaGTGGGAACTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFTQHLN*WELVHR
Trigger: TCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGT...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTTGTTGGCTGCATTGGTaGAGTGGCAGAACACTGCGA +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFCWLHW*SGRTLR
Trigger: TCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACA...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTGTTGGCTGCATTGGTaGAGTGGCAGAACACTGCGA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLCWLHW*SGRTLR
Trigger: TCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAAACTGGCACAGCTTCTaGATGACTTTCCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKNWHSF*MTFPGS
Trigger: GGATCCTGGGAAAGTCATTCAGAAGCTGTGCCAGTT...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTCCTGGAGCAAACCATTaGTTGGAGCTGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFPGANH*LELRCR
Trigger: CCTGCATCTCAGCTCCAATCAATGGTTTGCTCCAGG...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCCTGGAGCAAACCATTaGTTGGAGCTGAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFPGANH*LELRCR
Trigger: CCTGCATCTCAGCTCCAATCAATGGTTTGCTCCAGG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAAGACAGGCAGCTAAGCTaGCTATGGAAAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKDRQLS*LWKTPT
Trigger: GGTTGGGGTTTTCCATAGTCAGCTTAGCTGCCTGTC...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCGGTAGAAGAAGTGAATaGAGAATGTGGCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCGRRSE*RMWRPH
Trigger: GTGTGGCCGCCACATTCTTCATTCACTTCTTCTACC...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTGTTGACTTTGAGTGTTaGGAAGACCACCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTVDFEC*EDHLDN
Trigger: ATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAAC...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR GCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCAATACTGCTCCAGTTTaGAATATTCTCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPNTAPV*NILAAA
Trigger: TGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATT...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR GCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCACACTGGGTTCCATCTaGCTTGAGCGTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCTLGSI*LERVSA
Trigger: AGCACTTACACGCTCAAGGCAGATGGAACCCAGTGT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp TTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTTGGCTGAAAACACTGGGTTCCATCTaGCTTGAGCGTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: FVPQKQKLGPGLLLGWLKTLGSI*LERVSA
Trigger: AGCACTTACACGCTCAAGGCAGATGGAACCCAGTGT...TTTCAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR GCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCAGCTATGTTCTTACTaGCTCTGGCTCCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCQLCSY*LWLHRH
Trigger: GTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGAGCGTACTCTTCCCCTaGATCCTCTTCTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLSVLFP*ILFYAA
Trigger: TGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCT...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCTGCTCTTCTCTTGCTTaGCTGGCTTGTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLCSSLA*LACPQW
Trigger: CCATTGGGGACAAGCCAGGCAAGCAAGAGAAGAGCA...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCTCACTTCCATCACATaGCTTAGGACCTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLLTSIT*LRTSGT
Trigger: AGTGCCCGAGGTCCTAAGGCATGTGATGGAAGTGAG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAATGGCAGAAAGGTCCCTaGGGAGGAAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKWQKGP*GGSPFR
Trigger: TCTGAAAGGACTTCCTCCCCAGGGACCTTTCTGCCA...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCGGTAATGAATGCTTCTaGGAGCTGGCAGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCGNECF*ELAERS
Trigger: GGACCTTTCTGCCAGCTCCCAGAAGCATTCATTACC...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTCCTTTCTCTCCTCCTTaGCCAAAATCCGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFPFSPP*PKSGWE
Trigger: CTCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGG...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCCTTTCTCTCCTCCTTaGCCAAAATCCGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFPFSPP*PKSGWE
Trigger: CTCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGATTTCTGAATTCACTTaGGTGGGAACCGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQISEFT*VGTVES
Trigger: GCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAAT...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCAATTTCTGAATTCACTTaGGTGGGAACCGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPISEFT*VGTVES
Trigger: GCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAAT...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCGGCTTGACAATGTTATaGCTGACAGTGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPGLTML*LTVVVI
Trigger: AATGACAACCACTGTCAGCCATAACATTGTCAAGCC...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCGGCTTGACAATGTTATaGCTGACAGTGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSGLTML*LTVVVI
Trigger: AATGACAACCACTGTCAGCCATAACATTGTCAAGCC...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTTGCCACCCGAACGATaGTTGTTCTTAAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSLPPER*LFLKVI
Trigger: TATGACTTTTAAGAACAACCATCGTTCGGGTGGCAA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTTTCCCTGGATCACTGTaGCAAGACCGAAACCCCAAG +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFFPGSL*QDRNPK
Trigger: CTTGGGGTTTCGGTCTTGCCACAGTGATCCAGGGAA...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTACAGCATTGCTTCCCTaGATCACTGTGGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFTALLP*ITVARP
Trigger: CGGTCTTGCCACAGTGATCCAGGGAAGCAATGCTGT...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTGTTCATTGGCTTTATaGATAGATCCAGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFCSLAL*IDPGSG
Trigger: ACCACTGCCTGGATCTATTCATAAAGCCAATGAACA...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCCCAAAGGATCCATCATaGTGTCTGACACCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLPKDPS*CLTPEA
Trigger: TGCCTCTGGTGTCAGACATCATGATGGATCCTTTGG...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAATGCAAGTTTCCCAGCTaGCACTCATCAATGGCTACA +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKCKFPS*HSSMAT
Trigger: TGTAGCCATTGATGAGTGTCAGCTGGGAAACTTGCA...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCTGCAAGTTTCCCAGCTaGCACTCATCAATGGCTACA +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCCKFPS*HSSMAT
Trigger: TGTAGCCATTGATGAGTGTCAGCTGGGAAACTTGCA...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTCATGAGGATGGAGAATaGCGTCAGGTGGTTACACTT +
Preference number: 4 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTHEDGE*RQVVTL
Trigger: AAGTGTAACCACCTGACGTCATTCTCCATCCTCATG...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCATGAGGATGGAGAATaGCGTCAGGTGGTTACACTT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCHEDGE*RQVVTL
Trigger: AAGTGTAACCACCTGACGTCATTCTCCATCCTCATG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGGCAAAAGGCAATGTTaGCTATGCAGATGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFGKRQC*LCRCGA
Trigger: TGCGCCACATCTGCATAGTCAACATTGCCTTTTGCC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCGGTAGAAGAAGTGAATaGAGAATGTGGCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLGRRSE*RMWRPH
Trigger: GTGTGGCCGCCACATTCTTCATTCACTTCTTCTACC...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGGTAGAAGAAGTGAATaGAGAATGTGGCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFGRRSE*RMWRPH
Trigger: GTGTGGCCGCCACATTCTTCATTCACTTCTTCTACC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCACACTGGGTTCCATCTaGCTTGAGCGTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLTLGSI*LERVSA
Trigger: AGCACTTACACGCTCAAGGCAGATGGAACCCAGTGT...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGACACTGGGTTCCATCTaGCTTGAGCGTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLTLGSI*LERVSA
Trigger: AGCACTTACACGCTCAAGGCAGATGGAACCCAGTGT...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCTGTGGAACACAGCATTaGTTCCCTGGATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLCGTQH*FPGSLW
Trigger: CCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACA...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTGTGGAACACAGCATTaGTTCCCTGGATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLCGTQH*FPGSLW
Trigger: CCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAAGGTAATGAATGCTTCTaGGAGCTGGCAGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKGNECF*ELAERS
Trigger: GGACCTTTCTGCCAGCTCCCAGAAGCATTCATTACC...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTTCAGCGATATAGGATaGTTGTCACACACCACCTTT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFFSDIG*LSHTTF
Trigger: AAAGGTGGTGTGTGACAACCATCCTATATCGCTGAA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGATGAGGAGTCCACGTaGAAAGTCACAGCGTACTCT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLDEEST*KVTAYS
Trigger: AGAGTACGCTGTGACTTTCCACGTGGACTCCTCATC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTGTGACATTCTCCCTTaGAATAAGTTTGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSCDILP*NKFELH
Trigger: ATGAAGCTCAAACTTATTCCAAGGGAGAATGTCACA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCCAATGATGGGATCCTaGCATGTGACATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCPMMGS*HVTFSL
Trigger: AAGGGAGAATGTCACATGCCAGGATCCCATCATTGG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGCTGACACTCATCAATaGCTACATCACCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFADTHQ*LHHPTG
Trigger: ACCTGTGGGGTGATGTAGCCATTGATGAGTGTCAGC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR CAA 72 bp TGTCCTTGTCATGAGAACTGTGTCTCCTTGGGTGCATaGCCTGCAAATATTATTATCCAGCCAGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: CPCHENCVSLGA*PANIIIQPEAS
Trigger: GGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACACAGTTCTCATGACAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTGCTCAGCGCAGCTTCTaGAGAACAAATCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFAQRSF*RTNHKK
Trigger: CTTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGC...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCTTGATGACAGTGGTGTaGATGGAGTATTTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCLMTVV*MEYLSL
Trigger: CAGCGACAAATACTCCATTCACACCACTGTCATCAA...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAACGCAGCATTTGAATTaGTGGGAACTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKTQHLN*WELVHR
Trigger: TCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGT...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGCATCTTTGGTGGCAATaGTGTATGAATTCTTATATC +
Preference number: 4 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLHLWWQ*CMNSYI
Trigger: GATATAAGAATTCATACAGCATTGCCACCAAAGATG...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTCAAAGATGAATTCTaGTATGACAGTGAATTTCGT +
Preference number: 4 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSLKDEF*YDSEFR
Trigger: ACGAAATTCACTGTCATACCAGAATTCATCTTTGAG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCTTCAGCGATATAGGATaGTTGTCACACACCACCTTT +
Preference number: 4 (lower is better)
Translates to: CLLGCIACKYYYPARSILFSDIG*LSHTTF
Trigger: AAAGGTGGTGTGTGACAACCATCCTATATCGCTGAA...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCCATGGTATAAAACCTTaGGTGGATTTTAATACCAGC +
Preference number: 4 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSHGIKP*VDFNTS
Trigger: GCTGGTATTAAAATCCACCCAAGGTTTTATACCATG...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCCAATGATGGGATCCTaGCATGTGACATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFPMMGS*HVTFSL
Trigger: AAGGGAGAATGTCACATGCCAGGATCCCATCATTGG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCATTTCTGAATTCACTTaGGTGGGAACCGTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCISEFT*VGTVES
Trigger: GCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAAT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAGATGGCTTTGAGAGTTaGGAAAGCCACAGTAACGAT +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKDGFES*ESHSND
Trigger: ATCGTTACTGTGGCTTTCCCAACTCTCAAAGCCATC...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCGATGGCTTTGAGAGTTaGGAAAGCCACAGTAACGAT +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCDGFES*ESHSND
Trigger: ATCGTTACTGTGGCTTTCCCAACTCTCAAAGCCATC...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGAGACATTTTCAAAGCTaGTCTCAATATCCACCATGT +
Preference number: 4 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQRHFQS*SQYPPC
Trigger: ACATGGTGGATATTGAGATCAGCTTTGAAAATGTCT...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCCATAGTCTTGACAAGTaGGAGAGTGGAGACACCTTT +
Preference number: 4 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLHSLDK*ESGDTF
Trigger: AAAGGTGTCTCCACTCTCTCACTTGTCAAGACTATG...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR TCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCATAGTCTTGACAAGTaGGAGAGTGGAGACACCTTT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFHSLDK*ESGDTF
Trigger: AAAGGTGTCTCCACTCTCTCACTTGTCAAGACTATG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTTGATGACAGTGGTGTaGATGGAGTATTTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLLMTVV*MEYLSL
Trigger: CAGCGACAAATACTCCATTCACACCACTGTCATCAA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGTCTCTCATCATTTCTaGATTCACTTGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLVSHHF*IHLGGN
Trigger: GTTCCCACCCAAGTGAATTCAGAAATGATGAGAGAC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTGTCTCTCATCATTTCTaGATTCACTTGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFVSHHF*IHLGGN
Trigger: GTTCCCACCCAAGTGAATTCAGAAATGATGAGAGAC...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR GCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAACTGGGTTCCCTAGAATaGTTATCTTCCCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKLGSLE*LSSLPV
Trigger: AACAGGAAGGGAAGATAAGCATTCTAGGGAACCCAG...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCCATGGTATAAAACCTTaGGTGGATTTTAATACCAGC +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFHGIKP*VDFNTS
Trigger: GCTGGTATTAAAATCCACCCAAGGTTTTATACCATG...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCCTGATACCTCCTCATaGTATAAAACCTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLPDTSS*YKTLGG
Trigger: TCCACCCAAGGTTTTATACCATGAGGAGGTATCAGG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTGTGACATTCTCCCTTaGAATAAGTTTGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ACKYYYPARSILVPTLPFCDILP*NKFELH
Trigger: ATGAAGCTCAAACTTATTCCAAGGGAGAATGTCACA...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTGTGACATTCTCCCTTaGAATAAGTTTGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFCDILP*NKFELH
Trigger: ATGAAGCTCAAACTTATTCCAAGGGAGAATGTCACA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAAGATGGCTTTGAGAGTTaGGAAAGCCACAGTAACGAT +
Preference number: 4 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKDGFES*ESHSND
Trigger: ATCGTTACTGTGGCTTTCCCAACTCTCAAAGCCATC...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTCATTACTAAGCTGTTaGAGGATGTCTTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSLLSC*RMSFSV
Trigger: TACAGAGAAAGACATCCTCCAACAGCTTAGTAATGA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR CAA 72 bp GTTCATATGTGTCCTTGTCATGAGAACTGTGTCTCCTaGGGTGCATTGCCTGCAAATATTATTATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VHMCPCHENCVS*GALPANIIIQP
Trigger: TGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACACAGTTCTCATGACAAGGACACATATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
3UTR CAA 72 bp TTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATaGTTAGGTTGGCTGAAAGAGTGCAAAACAAAACAG +
Preference number: 4 (lower is better)
Translates to: FVPQKQKLGPGL*LGWLKECKTKQ
Trigger: CTGTTTTGTTTTGCACTCTTTCAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTGTTCATTGGCTTTATaGATAGATCCAGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLCSLAL*IDPGSG
Trigger: ACCACTGCCTGGATCTATTCATAAAGCCAATGAACA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTGTTGACTTTGAGTGTTaGGAAGACCACCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFVDFEC*EDHLDN
Trigger: ATTGTCAAGGTGGTCTTCTCAACACTCAAAGTCAAC...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTTCGGTCCCTCGAATTaGAAAACTGAGGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLFGPSN*KTEVVQ
Trigger: TTGAACAACCTCAGTTTTCCAATTCGAGGGACCGAA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCACATAGAAATCCTAAATaGCTTGACAATGTTATGGCT +
Preference number: 4 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPHRNPK*LDNVMA
Trigger: AGCCATAACATTGTCAAGCCATTTAGGATTTCTATG...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCCATAGAAATCCTAAATaGCTTGACAATGTTATGGCT +
Preference number: 4 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFHRNPK*LDNVMA
Trigger: AGCCATAACATTGTCAAGCCATTTAGGATTTCTATG...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCATGGTATAAAACCTTaGGTGGATTTTAATACCAGC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCHGIKP*VDFNTS
Trigger: GCTGGTATTAAAATCCACCCAAGGTTTTATACCATG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAATCATTACTAAGCTGTTaGAGGATGTCTTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKSLLSC*RMSFSV
Trigger: TACAGAGAAAGACATCCTCCAACAGCTTAGTAATGA...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTTGCCACCCGAACGATaGTTGTTCTTAAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLLPPER*LFLKVI
Trigger: TATGACTTTTAAGAACAACCATCGTTCGGGTGGCAA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR TCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTTCTTTAGGTCTTCTTaGAATCCTATGTTCAGTCTG +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLFFRSS*NPMFSL
Trigger: CAGACTGAACATAGGATTTCAAGAAGACCTAAAGAA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR GCA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCATCTTTGGTGGCAATaGTGTATGAATTCTTATATC +
Preference number: 4 (lower is better)
Translates to: YFPASLFYPFSWERSGTCHLWWQ*CMNSYI
Trigger: GATATAAGAATTCATACAGCATTGCCACCAAAGATG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTCATTACTAAGCTGTTaGAGGATGTCTTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: THGIGLGAKINMAFAFSLSLLSC*RMSFSV
Trigger: TACAGAGAAAGACATCCTCCAACAGCTTAGTAATGA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCTCAAAGATGAATTCTaGTATGACAGTGAATTTCGT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFLKDEF*YDSEFR
Trigger: ACGAAATTCACTGTCATACCAGAATTCATCTTTGAG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CCA 90 bp ATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTACTTTCTTTCTCAAAGATGAATTCTaGTATGACAGTGAATTTCGT +
Preference number: 4 (lower is better)
Translates to: IIIQPEASSCRLFLSTFFLKDEF*YDSEFR
Trigger: ACGAAATTCACTGTCATACCAGAATTCATCTTTGAG...AAAGAAAGTAGAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CCA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCATAGAAATCCTAAATaGCTTGACAATGTTATGGCT +
Preference number: 4 (lower is better)
Translates to: GITHGIGLGAKINMAFAFHRNPK*LDNVMA
Trigger: AGCCATAACATTGTCAAGCCATTTAGGATTTCTATG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
3UTR CAA 72 bp AAGGGTAAACCAAAACAAACCTTTTTCTCCCGTAAGTaGCTTTCATCCATGTGTCTTACTACAGCAATGAGA +
Preference number: 4 (lower is better)
Translates to: KGKPKQTFFSRK*LSSMCLTTAMR
Trigger: TCTCATTGCTGTAGTAAGACACATGGATGAAAGCAACTTACGGGAGAAAAAGGTTTGTTTTGGTTTACCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
3UTR CAA 72 bp ATGCACAGACCCTACGTGTTTCTGTCTTTTACAACTTaGGATGCGATGTTTATTTCATGGTTTCATTTAGAA +
Preference number: 4 (lower is better)
Translates to: MHRPYVFLSFTT*DAMFISWFHLE
Trigger: TTCTAAATGAAACCATGAAATAAACATCGCATCCAAAGTTGTAAAAGACAGAAACACGTAGGGTCTGTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS TCA 90 bp AGGCCCTTGACTCCTCCTTCCACTGGGTGCCCACACATTTGTAAGTaGCAGTCCCGCCGATGGCCTGTCCAGGGCTTCCGTAAACACCTG +
Preference number: 5 (lower is better)
Translates to: RPLTPPSTGCPHICK*QSRRWPVQGFRKHL
Trigger: CAGGTGTTTACGGAAGCCCTGGACAGGCCATCGGCGGGACTGTCACTTACAAATGTGTGGGCACCCAGTGGAAGGAGGAGTCAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS GCA 90 bp GACCATCCTGGCTCTACCCGTGTCAGCGTGGGATTGGTACCTGGCTaGTCCTGGGGTTTACTTGTTTCTAGGCTGTTCCCGGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: DHPGSTRVSVGLVPG*SWGLLVSRLFPVVL
Trigger: GAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCCAGGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CAA 90 bp GGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCTCCTCATCGTGTCAGCGTGGGATaGGTACCTGGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GGGLHHQHRLCSILIPPHRVSVG*VPGCSW
Trigger: CCAGGAGCAGCCAGGTACCAATCCCACGCTGACACG...ATGAGGAGGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CCA 90 bp ACAGGGACAGCAACACGGACCATCCTGGCTCTACCCGTGTCAGCGTaGGATTGGTACCTGGCTGCTCCTGGGGTTTACTTGTTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: TGTATRTILALPVSA*DWYLAAPGVYLFLG
Trigger: GCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCCAGGATGGTCCGTGTTGCTGTCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS-3UTR CAA 90 bp CAACGGCCCCAGCCTCTCCTGGTGCTGAGCTTCCAAGACGTCCATGTTGCCTTGACCTTTCTCTCCTCCTaGGCCAAAATCCGGATGGGA +
Preference number: 5 (lower is better)
Translates to: QRPQPLLVLSFQDVHVALTFLSS*AKIRMG
Trigger: TCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGGT...CAAGGCAACATGGACGTCTTGGAAGCTCAGCACCAGGAGAGGCTGGGGCCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS CCA 90 bp AGCTTCTGGTCCTGGGTGGGGCTCTTGATCAAAGCCTTGGCCACCTaGAGCAAACCATTGATTGGAGCTGAGATGCAGGCCCTTGACTCC +
Preference number: 5 (lower is better)
Translates to: SFWSWVGLLIKALAT*SKPLIGAEMQALDS
Trigger: GGAGTCAAGGGCCTGCATCTCAGCTCCAATCAATGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp TTCCCAGCACTAACAGAAAGGTCCCTCAGGTATGTAGGGAGCTTCTaGTCCTGGGTGGGGCTCTTGATCAAAGCCTTGGCCACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: FPALTERSLRYVGSF*SWVGLLIKALATWS
Trigger: GCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATACCTGAGGGACCTTTCTGTTAGTGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACTCTCGGGTGGAGGTCTTCACCATCAGCACCGACTCTGCTCCATCCTGATACCGCTCCTGGGGTTTACTaGTTTCTAGGCTGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: TLGWRSSPSAPTLLHPDTAPGVY*FLGCSR
Trigger: CCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGC...GGTATCAGGATGGAGCAGAGTCGGTGCTGATGGTGAAGACCTCCACCCGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS TCA 90 bp AGTGACAGTCCCGCCGATGGCCTGTCCAGGGCTTCCGTAAACACCTaGGAACTGGCACAGCTTCTGAATGACTTTCCCAGGATCCCCAAT +
Preference number: 5 (lower is better)
Translates to: SDSPADGLSRASVNT*ELAQLLNDFPRIPN
Trigger: ATTGGGGATCCTGGGAAAGTCATTCAGAAGCTGTGCCAGTTCTCAGGTGTTTACGGAAGCCCTGGACAGGCCATCGGCGGGACTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp GCACTAACAGAAAGGTCCCTCAGGTATGTAGGGAGCTTCTGGTCCTaGGTGGGGCTCTTGATCAAAGCCTTGGCCACCTGGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: ALTERSLRYVGSFWS*VGLLIKALATWSKP
Trigger: TGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATACCTGAGGGACCTTTCTGTTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTTCCTGGGTGGGGCTCTaGATCAAAGCCTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSSWVGL*IKALAT
Trigger: GGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGA...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGTCTTGCTTGCCTGGCTaGTCCCCAATGGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKSCLPG*SPMEGL
Trigger: GAGGCCCTCCATTGGGGACAAGCCAGGCAAGCAAGA...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS TCA 90 bp AACTGCAGTAGCCGCCTGGCAGGGCACTGTCATAGTCTTGACAAGTaGGAGAGTGGAGACACCTTTCCTCAGACCACTGGTAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: NCSSRLAGHCHSLDK*ESGDTFPQTTGSLS
Trigger: AGAAAGGCTACCAGTGGTCTGAGGAAAGGTGTCTCCACTCTCTCACTTGTCAAGACTATGACAGTGCCCTGCCAGGCGGCTACTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS TCA 90 bp CCTCGGGCACTTCCCCTTTGTAGCTGGCATTATCTCCTACAGAGGTaGAGGTCACAGCTATGTTCTTACTGCCTCTGGCTCCATAGGCAC +
Preference number: 5 (lower is better)
Translates to: PRALPLCSWHYLLQR*RSQLCSYCLWLHRH
Trigger: GTGCCTATGGAGCCAGAGGCAGTAAGAACATAGCTGTGACCTTCACCTCTGTAGGAGATAATGCCAGCTACAAAGGGGAAGTGCCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225004.2
ENSMUST00000225962.2
CDS TCA 90 bp TGCTCCTGGGGTTTACTTGTTTCTAGGCTGTTCCCGGTGGTGCTCTaGACTGTACTCACTTCCATCACATGCCTTAGGACCTCGGGCACT +
Preference number: 5 (lower is better)
Translates to: CSWGLLVSRLFPVVL*TVLTSITCLRTSGT
Trigger: AGTGCCCGAGGTCCTAAGGCATGTGATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225004.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCCTGAGATGCAGGCCCTaGACTCCTCCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFLRCRP*TPPSTG
Trigger: CCCAGTGGAAGGAGGAGTCAAGGGCCTGCATCTCAG...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCTCTTGCTTGCCTGGCTaGTCCCCAATGGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: ACKYYYPARSILVPTLPFSCLPG*SPMEGL
Trigger: GAGGCCCTCCATTGGGGACAAGCCAGGCAAGCAAGA...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTCTTGCTTGCCTGGCTaGTCCCCAATGGAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSCLPG*SPMEGL
Trigger: GAGGCCCTCCATTGGGGACAAGCCAGGCAAGCAAGA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 90 bp ACTGGTACACAGACCACTGGCTTCCAAAGGATCCATCATGATGTCTaGCACCAGAGGCAGCGGGTGAACGGTGACATCTTTGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: TGTQTTGFQRIHHDV*HQRQRVNGDIFGGN
Trigger: ATTGCCACCAAAGATGTCACCGTTCACCCGCTGCCTCTGGTGTCAGACATCATGATGGATCCTTTGGAAGCCAGTGGTCTGTGTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 90 bp GTAGCATGCTTGCTTGCCGATAACTTCTCTTTCAGCGGGAAAGGATaGGGAGTCCACGTGGAAAGTCACAGCGTACTCTTCCCCTGCATC +
Preference number: 5 (lower is better)
Translates to: VACLLADNFSFSGKG*GVHVESHSVLFPCI
Trigger: GATGCAGGGGAAGAGTACGCTGTGACTTTCCACGTGGACTCCTCATCCTTTCCCGCTGAAAGAGAAGTTATCGGCAAGCAAGCATGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp TTCATAGATGGGCTCCGGACTGAGCTGTTGGCTGCATTGGTGAAGTaGCAGAACACTGCGATGTCTTTGGGACATCGAGGTAAGTTCGCT +
Preference number: 5 (lower is better)
Translates to: FIDGLRTELLAALVK*QNTAMSLGHRGKFA
Trigger: AGCGAACTTACCTCGATGTCCCAAAGACATCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTCTTGATCAAAGCCTaGGCCACCTGGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSLLIKA*ATWSKP
Trigger: TGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTCCCAGCTGGAGGGCTaGGGAAAACCTTTCCACGGA +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSQLEG*GKPFHG
Trigger: TCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGGA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTGGCACTGTCATAGTCTaGACAAGTGAGAGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSGTVIV*TSERVE
Trigger: CTCCACTCTCTCACTTGTCAAGACTATGACAGTGCC...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGGAGCTGTTGGCTGCATaGGTGAAGTGGCAGAACACT +
Preference number: 5 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKELLAA*VKWQNT
Trigger: AGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTC...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAACTGAGATGCAGGCCCTaGACTCCTCCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKLRCRP*TPPSTG
Trigger: CCCAGTGGAAGGAGGAGTCAAGGGCCTGCATCTCAG...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS TCA 90 bp ACAGCGTACTCTTCCCCTGCATCCTCTTCTACGCAGCATTTGAATTaGTGGGAACTGGTACACAGACCACTGGCTTCCAAAGGATCCATC +
Preference number: 5 (lower is better)
Translates to: TAYSSPASSSTQHLN*WELVHRPLASKGSI
Trigger: GATGGATCCTTTGGAAGCCAGTGGTCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 90 bp ATTCTCCCTTGGAATAAGTTTGAGCTTCATAGATGGGCTCCGGACTaGGCTGTTGGCTGCATTGGTGAAGTGGCAGAACACTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: ILPWNKFELHRWAPD*AVGCIGEVAEHCDV
Trigger: GACATCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTCAAACTTATTCCAAGGGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp CTCCAGTTTGCAATATTCTCGCTGCAGCAGTTCAGCGATATAGGATaGTTGTCACACACCACCTTTCTCTCCTCCTTGGCCAAAATCCGG +
Preference number: 5 (lower is better)
Translates to: LQFAIFSLQQFSDIG*LSHTTFLSSLAKIR
Trigger: CCGGATTTTGGCCAAGGAGGAGAGAAAGGTGGTGTGTGACAACCATCCTATATCGCTGAACTGCTGCAGCGAGAATATTGCAAACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCACCTTTCTCTCCTCCTaGGCCAAAATCCGGATGGGA +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFTFLSS*AKIRMG
Trigger: TCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGGT...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGAGCTGTTGGCTGCATaGGTGAAGTGGCAGAACACT +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFELLAA*VKWQNT
Trigger: AGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCTGAGATGCAGGCCCTaGACTCCTCCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFLRCRP*TPPSTG
Trigger: CCCAGTGGAAGGAGGAGTCAAGGGCCTGCATCTCAG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCTCCTGGGTGGGGCTCTaGATCAAAGCCTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLSWVGL*IKALAT
Trigger: GGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGA...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTTCCTGGGTGGGGCTCTaGATCAAAGCCTTGGCCACC +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFSWVGL*IKALAT
Trigger: GGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGA...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TGCCCTTCCGCTATGAAGAACGGAGAAGCAGAAATAGACTTCAAGCTTAGAACTTCCCAGCTGGAGGGCTaGGGAAAACCTTTCCACGGA +
Preference number: 5 (lower is better)
Translates to: CPSAMKNGEAEIDFKLRTSQLEG*GKPFHG
Trigger: TCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGGA...AGTTCTAAGCTTGAAGTCTATTTCTGCTTCTCCGTTCTTCATAGCGGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCTCCCAGCTGGAGGGCTaGGGAAAACCTTTCCACGGA +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCSQLEG*GKPFHG
Trigger: TCCGTGGAAAGGTTTTCCCAAGCCCTCCAGCTGGGA...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTCCCAGCCCCCTGTATaGTTGGCAAGACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSQPPV*LARLKF
Trigger: GAACTTCAGTCTTGCCAACAATACAGGGGGCTGGGA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TGGCCTAGGAACTTAGAAGGCTGGGAAGGGATAGAACACAGCAATACAGACAGCATGTGGAACACAGCATaGCTTCCCTGGATCACTGTG +
Preference number: 5 (lower is better)
Translates to: WPRNLEGWEGIEHSNTDSMWNTA*LPWITV
Trigger: CACAGTGATCCAGGGAAGCAATGCTGTGTTCCACAT...GCTGTCTGTATTGCTGTGTTCTATCCCTTCCCAGCCTTCTAAGTTCCTAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGAGCCCCTGGAAGGCATaGAGGAGAGTAAATATGATG +
Preference number: 5 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLSPWKA*RRVNMM
Trigger: CATCATATTTACTCTCCTCAATGCCTTCCAGGGGCT...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS TCA 90 bp AAGTCACAGCGTACTCTTCCCCTGCATCCTCTTCTACGCAGCATTTaGATTGATGGGAACTGGTACACAGACCACTGGCTTCCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: KSQRTLPLHPLLRSI*IDGNWYTDHWLPKD
Trigger: ATCCTTTGGAAGCCAGTGGTCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCTGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS GCA 90 bp CTGTATGACTTGTTCATTGGCTTTATGAATAGATCCAGGCAGTGGTaGCGATGTAACCCGGACTACGTAGTTCACAACCACGCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LYDLFIGFMNRSRQW*RCNPDYVVHNHAAL
Trigger: AAGGGCAGCGTGGTTGTGAACTACGTAGTCCGGGTTACATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS CCA 90 bp CTTCCCCGGCTAGCTCATGTTCTTGGAGAATTGAAGGTTGAACAATaGGCTCTGTTGGTGTGCTCAGCGCAGCTTCTGAAGAACAAATCA +
Preference number: 5 (lower is better)
Translates to: LPRLAHVLGELKVEQ*ALLVCSAQLLKNKS
Trigger: TGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAGCCGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CCA 90 bp GTTCTGTATGACTTGTTCATTGGCTTTATGAATAGATCCAGGCAGTaGTGCCGATGTAACCCGGACTACGTAGTTCACAACCACGCTGCC +
Preference number: 5 (lower is better)
Translates to: VLYDLFIGFMNRSRQ*CRCNPDYVVHNHAA
Trigger: GGCAGCGTGGTTGTGAACTACGTAGTCCGGGTTACATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTCATACAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGCACTCCAGAGTCACATaGTCTCCCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLHSRVT*SPSKMN
Trigger: ATTCATCTTTGAGGGAGACAATGTGACTCTGGAGTG...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTAGCGATATAGGATGGTaGTCACACACCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTSDIGW*SHTTFL
Trigger: GAGAAAGGTGGTGTGTGACAACCATCCTATATCGCT...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCCGGGTTATTGTTAGGTaGGCTACAGAGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFRVIVR*ATEVKV
Trigger: GACCTTCACCTCTGTAGCCAACCTAACAATAACCCG...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CAGAGTGGCTGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGTACGCAGCATTTGAATaGATGGGAACTGGTACACAG +
Preference number: 5 (lower is better)
Translates to: QSGCHTCSACSLCFAQTLYAAFE*MGTGTQ
Trigger: CTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTA...CAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACAGCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp ATGTCAGACCTCAGACTCTTCTATCTTGTCTTTCCCAACGAAGGACCCACACAGGAAGATAAACTGCTGTaGGTAGATTTGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: MSDLRLFYLVFPNEGPTQEDKLL*VDLGVA
Trigger: GGCCACCCCCAAATCTACCAACAGCAGTTTATCTTC...CTGTGTGGGTCCTTCGTTGGGAAAGACAAGATAGAAGAGTCTGAGGTCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCGAAGATAAACTGCTGTaGGTAGATTTGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFEDKLL*VDLGVA
Trigger: GGCCACCCCCAAATCTACCAACAGCAGTTTATCTTC...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CTGCTCCCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCACAGGTCAGAGTCTTaGAAGATAAACTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LLPEVCRESTLPIDLDGSHRSES*KINCCW
Trigger: CCAACAGCAGTTTATCTTCAAAGACTCTGACCTGTG...AGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCATGTGGAACACAGCATaGCTTCCCTGGATCACTGTG +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFMWNTA*LPWITV
Trigger: CACAGTGATCCAGGGAAGCAATGCTGTGTTCCACAT...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TCTGCGATTTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAGCCCCTGGAAGGCATaGAGGAGAGTAAATATGATG +
Preference number: 5 (lower is better)
Translates to: SAICLSSQVLFLLPSGCKSPWKA*RRVNMM
Trigger: CATCATATTTACTCTCCTCAATGCCTTCCAGGGGCT...CTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAAATCGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCAGCGATATAGGATGGTaGTCACACACCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSDIGW*SHTTFL
Trigger: GAGAAAGGTGGTGTGTGACAACCATCCTATATCGCT...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAAGAGCTGTTGGCTGCATaGGTGAAGTGGCAGAACACT +
Preference number: 5 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKELLAA*VKWQNT
Trigger: AGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTC...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCTCTTGATCAAAGCCTaGGCCACCTGGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCLLIKA*ATWSKP
Trigger: TGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACATGTGGGAATGTGGGCAGTAGGTGGCGCTCTCTTAGCAAAGTGAACATGACTCACAGGTCAGAGTCTTaGAAGATAAACTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: TCGNVGSRWRSLSKVNMTHRSES*KINCCW
Trigger: CCAACAGCAGTTTATCTTCAAAGACTCTGACCTGTG...AGTCATGTTCACTTTGCTAAGAGAGCGCCACCTACTGCCCACATTCCCACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGCTCCTGGGGTTTACTaGTTTCTAGGCTGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLAPGVY*FLGCSR
Trigger: CCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
CDS TCA 90 bp ATGTCAGCTTCGGTCCCTCGAATTGGAAAACTGAGGTTGTTCAAGTaGGCTCTGATGGACTCCAGGAAGGAGACATTTTCAAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: MSASVPRIGKLRLFK*ALMDSRKETFSKLI
Trigger: GATCAGCTTTGAAAATGTCTCCTTCCTGGAGTCCATCAGAGCTCACTTGAACAACCTCAGTTTTCCAATTCGAGGGACCGAAGCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000224278.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCACCTTTCTCTCCTCCTaGGCCAAAATCCGGATGGGA +
Preference number: 5 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLTFLSS*AKIRMG
Trigger: TCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGGT...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCACCTCAGAAACAGAAATaGGGTCCCGGGTTATTGTTA +
Preference number: 5 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPPQKQK*GPGLLL
Trigger: TAACAATAACCCGGGACCCAATTTCTGTTTCTGAGG...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp TTGCTTATCGAGCCAGGTCCTTTTTCTCCTTCCAAGTGGCTGCAAGAAACACCATACGCAGCATTTGAATaGATGGGAACTGGTACACAG +
Preference number: 5 (lower is better)
Translates to: LLIEPGPFSPSKWLQETPYAAFE*MGTGTQ
Trigger: CTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTA...TGGTGTTTCTTGCAGCCACTTGGAAGGAGAAAAAGGACCTGGCTCGATAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CCAGAAGTCTGCAGAGAGAGCACGTTACCCATAGATTTGGATGGGTCTCTTTTCTCCCTTGGAATAAGTTaGAGCTTCATAGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: PEVCRESTLPIDLDGSLFSLGIS*SFIDGL
Trigger: GAGCCCATCTATGAAGCTCAAACTTATTCCAAGGGA...GAAAAGAGACCCATCCAAATCTATGGGTAACGTGCTCTCTCTGCAGACTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCTCCCAGCCCCCTGTATaGTTGGCAAGACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLSQPPV*LARLKF
Trigger: GAACTTCAGTCTTGCCAACAATACAGGGGGCTGGGA...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTTCCCAGCCCCCTGTATaGTTGGCAAGACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFSQPPV*LARLKF
Trigger: GAACTTCAGTCTTGCCAACAATACAGGGGGCTGGGA...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCATGTGGAACACAGCATaGCTTCCCTGGATCACTGTG +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCMWNTA*LPWITV
Trigger: CACAGTGATCCAGGGAAGCAATGCTGTGTTCCACAT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp AGTTTCACACTCCAGAGTCACATTGTCTCCCTCAAAGATGAATTCTaGTATGACAGTGAATTTCGTCTCATTGCTCGGGGTTCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SFTLQSHIVSLKDEF*YDSEFRLIARGSLE
Trigger: TTCCAGGGAACCCCGAGCAATGAGACGAAATTCACTGTCATACCAGAATTCATCTTTGAGGGAGACAATGTGACTCTGGAGTGTGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp GCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGTGCCGACTCTTCCTTTCCATGTTCTTGGAGAATaGAAGGTTGAACAATGGGCT +
Preference number: 5 (lower is better)
Translates to: ACKYYYPARSILVPTLPFHVLGE*KVEQWA
Trigger: AGCCCATTGTTCAACCTTCAATTCTCCAAGAACATG...GAAAGGAAGAGTCGGCACGAGGATGCTTCTGGCTGGATAATAATATTTGCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGGCACTGTCATAGTCTaGACAAGTGAGAGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLGTVIV*TSERVE
Trigger: CTCCACTCTCTCACTTGTCAAGACTATGACAGTGCC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAACGGGTTATTGTTAGGTaGGCTACAGAGGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKRVIVR*ATEVKV
Trigger: GACCTTCACCTCTGTAGCCAACCTAACAATAACCCG...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAAGAAGATAAACTGCTGTaGGTAGATTTGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKEDKLL*VDLGVA
Trigger: GGCCACCCCCAAATCTACCAACAGCAGTTTATCTTC...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp CCTCCACACTGGCTGCTGCTGTACTCTCTCTCATCTTTGTGTGTATTTTCTCCCGAAATCCTAAATGGCTaGACAATGTTATGGCTGACA +
Preference number: 5 (lower is better)
Translates to: PPHWLLLYSLSSLCVFSPEILNG*TMLWLT
Trigger: TGTCAGCCATAACATTGTCAAGCCATTTAGGATTTC...GGGAGAAAATACACACAAAGATGAGAGAGAGTACAGCAGCAGCCAGTGTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCAGCCCCTGGAAGGCATaGAGGAGAGTAAATATGATG +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCSPWKA*RRVNMM
Trigger: CATCATATTTACTCTCCTCAATGCCTTCCAGGGGCT...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 90 bp ACGTTAATGGTAGCAAGTATGTCTCTCATCATTTCTGAATTCACTTaGGTGGGAACCGTTGAGAGCAAGTCAAGGATGCTGATGATGGCT +
Preference number: 5 (lower is better)
Translates to: TLMVASMSLIISEFT*VGTVESKSRMLMMA
Trigger: AGCCATCATCAGCATCCTTGACTTGCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAATGATGAGAGACATACTTGCTACCATTAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCACTCCAGAGTCACATaGTCTCCCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCHSRVT*SPSKMN
Trigger: ATTCATCTTTGAGGGAGACAATGTGACTCTGGAGTG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TGTCATACGTGCTCTGCATGTTCACTGTGCTTTGCTCAGACCTTGACATACAAATCCCTTGGAATAAGTTaGAGCTTCATAGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: CHTCSACSLCFAQTLTYKSLGIS*SFIDGL
Trigger: GAGCCCATCTATGAAGCTCAAACTTATTCCAAGGGA...TTTGTATGTCAAGGTCTGAGCAAAGCACAGTGAACATGCAGAGCACGTATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS GCA 90 bp AATGCTTATCTTCCCTTCCTGTTTCCATTCAATACTGCTCCAGTTTaGAATATTCTCGCTGCAGCAGTTCAGCGATATAGGATGGTTGTC +
Preference number: 5 (lower is better)
Translates to: NAYLPFLFPFNTAPV*NILAAAVQRYRMVV
Trigger: GACAACCATCCTATATCGCTGAACTGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATTGAATGGAAACAGGAAGGGAAGATAAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TACTTTCCCGCCTCTCTCTTTTATCCTTTTAGCTGGGAAAGATCAGGAACTTGCCATGTTCTTGGAGAATaGAAGGTTGAACAATGGGCT +
Preference number: 5 (lower is better)
Translates to: YFPASLFYPFSWERSGTCHVLGE*KVEQWA
Trigger: AGCCCATTGTTCAACCTTCAATTCTCCAAGAACATG...GCAAGTTCCTGATCTTTCCCAGCTAAAAGGATAAAAGAGAGAGGCGGGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCACTCCAGAGTCACATaGTCTCCCTCAAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFHSRVT*SPSKMN
Trigger: ATTCATCTTTGAGGGAGACAATGTGACTCTGGAGTG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCCTCAGAAACAGAAATaGGGTCCCGGGTTATTGTTA +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLPQKQK*GPGLLL
Trigger: TAACAATAACCCGGGACCCAATTTCTGTTTCTGAGG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTTACGCAGCATTTGAATaGATGGGAACTGGTACACAG +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFYAAFE*MGTGTQ
Trigger: CTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTA...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGTCCCTTGGAATAAGTTaGAGCTTCATAGATGGGCTC +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLSLGIS*SFIDGL
Trigger: GAGCCCATCTATGAAGCTCAAACTTATTCCAAGGGA...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGCACAGGTCAGAGTCTTaGAAGATAAACTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLHRSES*KINCCW
Trigger: CCAACAGCAGTTTATCTTCAAAGACTCTGACCTGTG...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp TGTCTCCTTGGGTGCATTGCCTGCAAATATTATTATCCAGCCAGAAGCATCCTCGAAATCCTAAATGGCTaGACAATGTTATGGCTGACA +
Preference number: 5 (lower is better)
Translates to: CLLGCIACKYYYPARSILEILNG*TMLWLT
Trigger: TGTCAGCCATAACATTGTCAAGCCATTTAGGATTTC...GAGGATGCTTCTGGCTGGATAATAATATTTGCAGGCAATGCACCCAAGGAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp ATCATGAGAGATGAACCTTTCTTGAATCTTACAGAGTGGCTGTCATACGTGCTCCTATGGATGTTGACTTaGAGTGTTGAGAAGACCACC +
Preference number: 5 (lower is better)
Translates to: IMRDEPFLNLTEWLSYVLLWMLT*SVEKTT
Trigger: GGTGGTCTTCTCAACACTCAAAGTCAACATCCATAG...GAGCACGTATGACAGCCACTCTGTAAGATTCAAGAAAGGTTCATCTCTCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAACTATGGATGTTGACTTaGAGTGTTGAGAAGACCACC +
Preference number: 5 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKLWMLT*SVEKTT
Trigger: GGTGGTCTTCTCAACACTCAAAGTCAACATCCATAG...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
CDS-3UTR CAA 90 bp GGCATTACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTCTATGGATGTTGACTTaGAGTGTTGAGAAGACCACC +
Preference number: 5 (lower is better)
Translates to: GITHGIGLGAKINMAFAFLWMLT*SVEKTT
Trigger: GGTGGTCTTCTCAACACTCAAAGTCAACATCCATAG...AAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACATGGGATAGGGCTAGGAGCAAAAATAAACATGGCCTTTGCTTTTAGTCTGGAAATCCTAAATGGCTaGACAATGTTATGGCTGACA +
Preference number: 5 (lower is better)
Translates to: THGIGLGAKINMAFAFSLEILNG*TMLWLT
Trigger: TGTCAGCCATAACATTGTCAAGCCATTTAGGATTTC...CAGACTAAAAGCAAAGGCCATGTTTATTTTTGCTCCTAGCCCTATCCCATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS-3UTR CAA 90 bp ACACCAAGGGCTGTCATCACCACAGTCACAATGAAGTCACGAGTACAAAATAAAGAGGTTCTGTATGACTaGTTCATTGGCTTTATGAAT +
Preference number: 5 (lower is better)
Translates to: TPRAVITTVTMKSRVQNKEVLYD*FIGFMN
Trigger: ATTCATAAAGCCAATGAACAAGTCATACAGAACCTC...TTTATTTTGTACTCGTGACTTCATTGTGACTGTGGTGATGACAGCCCTTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113599.2
CDS CCA 72 bp GCAACACGGACCATCCTGGCTCTACCCGTGTCAGCGTaGGATTGGTACCTGGCTGCTCCTGGGGTTTACTTG +
Preference number: 6 (lower is better)
Translates to: ATRTILALPVSA*DWYLAAPGVYL
Trigger: CAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCCAGGATGGTCCGTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS GCA 72 bp GGCTCTACCCGTGTCAGCGTGGGATTGGTACCTGGCTaGTCCTGGGGTTTACTTGTTTCTAGGCTGTTCCCG +
Preference number: 6 (lower is better)
Translates to: GSTRVSVGLVPG*SWGLLVSRLFP
Trigger: CGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CCA 72 bp GAAAGGTCCCTCAGGTATGTAGGGAGCTTCTGGTCCTaGGTGGGGCTCTTGATCAAAGCCTTGGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: ERSLRYVGSFWS*VGLLIKALATW
Trigger: CCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATACCTGAGGGACCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp CATGCTCTTCATCTGAACGTTAGGGTGGGCGAGGAATaGAGGAGTGCTGTCTCCCAGCTGGAGGGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: HALHLNVRVGEE*RSAVSQLEGLG
Trigger: TCCCAAGCCCTCCAGCTGGGAGACAGCACTCCTCCATTCCTCGCCCACCCTAACGTTCAGATGAAGAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp ACCCGTGTCAGCGTGGGATTGGTACCTGGCTGCTCCTaGGGTTTACTTGTTTCTAGGCTGTTCCCGGTGGTG +
Preference number: 6 (lower is better)
Translates to: TRVSVGLVPGCS*GLLVSRLFPVV
Trigger: CACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CCA 72 bp TCCTGGGTGGGGCTCTTGATCAAAGCCTTGGCCACCTaGAGCAAACCATTGATTGGAGCTGAGATGCAGGCC +
Preference number: 6 (lower is better)
Translates to: SWVGLLIKALAT*SKPLIGAEMQA
Trigger: GGCCTGCATCTCAGCTCCAATCAATGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp CGGACCATCCTGGCTCTACCCGTGTCAGCGTGGGATTaGTACCTGGCTGCTCCTGGGGTTTACTTGTTTCTA +
Preference number: 6 (lower is better)
Translates to: RTILALPVSAWD*YLAAPGVYLFL
Trigger: TAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCCAGGATGGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CAA 72 bp GCGTGGGATTGGTACCTGGCTGCTCCTGGGGTTTACTaGTTTCTAGGCTGTTCCCGGTGGTGCTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: AWDWYLAAPGVY*FLGCSRWCSEL
Trigger: CAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CAA 72 bp ACGGACCATCCTGGCTCTACCCGTGTCAGCGTGGGATaGGTACCTGGCTGCTCCTGGGGTTTACTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: TDHPGSTRVSVG*VPGCSWGLLVS
Trigger: AGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGGTAGAGCCAGGATGGTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS CAA 90 bp AGGTCCCTCAGGTATGTAGGGAGCTTCTGGTCCTGGGTGGGGCTCTaGATCAAAGCCTTGGCCACCTGGAGCAAACCATTGATTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RSLRYVGSFWSWVGL*IKALATWSKPLIGA
Trigger: AGCTCCAATCAATGGTTTGCTCCAGGTGGCCAAGGCTTTGATCAAGAGCCCCACCCAGGACCAGAAGCTCCCTACATACCTGAGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp CCCGTGTCAGCGTGGGATTGGTACCTGGCTGCTCCTGGGGTTTACTaGTTTCTAGGCTGTTCCCGGTGGTGCTCTGAACTGTACTCACTT +
Preference number: 6 (lower is better)
Translates to: PVSAWDWYLAAPGVY*FLGCSRWCSELYSL
Trigger: AAGTGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGGTACCAATCCCACGCTGACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225004.2
CDS TCA 72 bp AGCCGCCTGGCAGGGCACTGTCATAGTCTTGACAAGTaGGAGAGTGGAGACACCTTTCCTCAGACCACTGGT +
Preference number: 6 (lower is better)
Translates to: SRLAGHCHSLDK*ESGDTFPQTTG
Trigger: ACCAGTGGTCTGAGGAAAGGTGTCTCCACTCTCTCACTTGTCAAGACTATGACAGTGCCCTGCCAGGCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS GCA 72 bp AGAAAGGTCCCTGGGGAGGAAGTCCTTTCAGACAACTaGAGTAGCCGCCTGGCAGGGCACTGTCATAGTCTT +
Preference number: 6 (lower is better)
Translates to: RKVPGEEVLSDN*SSRLAGHCHSL
Trigger: AAGACTATGACAGTGCCCTGCCAGGCGGCTACTGCAGTTGTCTGAAAGGACTTCCTCCCCAGGGACCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS TCA 72 bp TCCCCGGCTAGCTCATGTTCTTGGAGAATTGAAGGTTaGACAATGGGCTCTGTTGGTGTGCTCAGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: SPASSCSWRIEG*TMGSVGVLSAA
Trigger: AGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAGCCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS TCA 72 bp CAGACCACTGGCTTCCAAAGGATCCATCATGATGTCTaGCACCAGAGGCAGCGGGTGAACGGTGACATCTTT +
Preference number: 6 (lower is better)
Translates to: QTTGFQRIHHDV*HQRQRVNGDIF
Trigger: AAAGATGTCACCGTTCACCCGCTGCCTCTGGTGTCAGACATCATGATGGATCCTTTGGAAGCCAGTGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp GCTCCTGGGGTTTACTTGTTTCTAGGCTGTTCCCGGTaGTGCTCTGAACTGTACTCACTTCCATCACATGCC +
Preference number: 6 (lower is better)
Translates to: APGVYLFLGCSR*CSELYSLPSHA
Trigger: GGCATGTGATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225004.2
ENSMUST00000225962.2
CDS CAA 72 bp AGTTTGAGCTTCATAGATGGGCTCCGGACTGAGCTGTaGGCTGCATTGGTGAAGTGGCAGAACACTGCGATG +
Preference number: 6 (lower is better)
Translates to: SLSFIDGLRTEL*AALVKWQNTAM
Trigger: CATCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp TTGGCCTCAGTAGCTCTTCCCCGGCTAGCTCATGTTCTTGGAGAATaGAAGGTTGAACAATGGGCTCTGTTGGTGTGCTCAGCGCAGCTT +
Preference number: 6 (lower is better)
Translates to: LASVALPRLAHVLGE*KVEQWALLVCSAQL
Trigger: AAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAGCCGGGGAAGAGCTACTGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CAA 90 bp CCCTGGAAGGCATTGAGGAGAGTAAATATGATGTGGAACACAGCATaGCTTCCCTGGATCACTGTGGCAAGACCGAAACCCCAAGTGAGC +
Preference number: 6 (lower is better)
Translates to: PWKALRRVNMMWNTA*LPWITVARPKPQVS
Trigger: GCTCACTTGGGGTTTCGGTCTTGCCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACATCATATTTACTCTCCTCAATGCCTTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp TTGGGTCCCGGGTTATTGTTAGGTTGGCTACAGAGGTaGAGGTCACAGCTATGTTCTTACTGCCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LGPGLLLGWLQR*RSQLCSYCLWL
Trigger: GAGCCAGAGGCAGTAAGAACATAGCTGTGACCTTCACCTCTGTAGCCAACCTAACAATAACCCGGGACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS TCA 72 bp GGATCCATCATGATGTCTGACACCAGAGGCAGCGGGTaGACGGTGACATCTTTGGTGGCAATGCTGTATGAA +
Preference number: 6 (lower is better)
Translates to: GSIMMSDTRGSG*TVTSLVAMLYE
Trigger: TTCATACAGCATTGCCACCAAAGATGTCACCGTTCACCCGCTGCCTCTGGTGTCAGACATCATGATGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp GCTGCATTGGTGAAGTGGCAGAACACTGCGATGTCTTaGGGACATCGAGGTAAGTTCGCTGGGAGACTGTAT +
Preference number: 6 (lower is better)
Translates to: AALVKWQNTAMS*GHRGKFAGRLY
Trigger: ATACAGTCTCCCAGCGAACTTACCTCGATGTCCCAAAGACATCGCAGTGTTCTGCCACTTCACCAATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp GTCAGGTGGTTACACTTGCAGAAGACTCTGTCCCTATaGTCCCTACCATCATCTTCCACAGAGCACCCACTG +
Preference number: 6 (lower is better)
Translates to: VRWLHLQKTLSL*SLPSSSTEHPL
Trigger: CAGTGGGTGCTCTGTGGAAGATGATGGTAGGGACAATAGGGACAGAGTCTTCTGCAAGTGTAACCACCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp TTATTGTTAGGTTGGCTGGCTGCTCCTGGGGTTTACTaGTTTCTAGGCTGTTCCCGGTGGTGCTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: LLLGWLAAPGVY*FLGCSRWCSEL
Trigger: CAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGGAGCAGCCAGCCAACCTAACAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
CDS CAA 90 bp CACAGCGTACTCTTCCCCTGCATCCTCTTCTACGCAGCATTTGAATaGATGGGAACTGGTACACAGACCACTGGCTTCCAAAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: HSVLFPCILFYAAFE*MGTGTQTTGFQRIH
Trigger: ATGGATCCTTTGGAAGCCAGTGGTCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTAGAAGAGGATGCAGGGGAAGAGTACGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp CTTGGAATAAGTTTGAGCTTCATAGATGGGCTCCGGACTGAGCTGTaGGCTGCATTGGTGAAGTGGCAGAACACTGCGATGTCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LGISLSFIDGLRTEL*AALVKWQNTAMSLG
Trigger: TCCCAAAGACATCGCAGTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTCAAACTTATTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp CCAATGATGGGATCCTGGCATGTGACATTCTCCCTTGGAATAAGTTaGAGCTTCATAGATGGGCTCCGGACTGAGCTGTTGGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: PMMGSWHVTFSLGIS*SFIDGLRTELLAAL
Trigger: CAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTCAAACTTATTCCAAGGGAGAATGTCACATGCCAGGATCCCATCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp TTGCTTGCCGATAACTTCTCTTTCAGCGGGAAAGGATaGGGAGTCCACGTGGAAAGTCACAGCGTACTCTTC +
Preference number: 6 (lower is better)
Translates to: LLADNFSFSGKG*GVHVESHSVLF
Trigger: GAAGAGTACGCTGTGACTTTCCACGTGGACTCCTCATCCTTTCCCGCTGAAAGAGAAGTTATCGGCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp TGGAATAAGTTTGAGCTTCATAGATGGGCTCCGGACTaGGCTGTTGGCTGCATTGGTGAAGTGGCAGAACAC +
Preference number: 6 (lower is better)
Translates to: WNKFELHRWAPD*AVGCIGEVAEH
Trigger: GTGTTCTGCCACTTCACCAATGCAGCCAACAGCTCAGTCCGGAGCCCATCTATGAAGCTCAAACTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp GGTTTACTTGTTTCTAGGCTGTTCCCGGTGGTGCTCTaGACTGTACTCACTTCCATCACATGCCTTAGGACC +
Preference number: 6 (lower is better)
Translates to: GLLVSRLFPVVL*TVLTSITCLRT
Trigger: GGTCCTAAGGCATGTGATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225004.2
ENSMUST00000225962.2
CDS TCA 72 bp GGCGGAGGAAATGACTGCAGGTTTAGCTTTACTCACTaGAGGTTGAACAATGGGCTCTGTTGGTGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: GGGNDCRFSFTH*RLNNGLCWCAQ
Trigger: CTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAGTGAGTAAAGCTAAACCTGCAGTCATTTCCTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224278.2
CDS GCA 72 bp CCTGGGGTTTACTTGTTTCTAGGCTGTTCCCGGTGGTaGTCTGAACTGTACTCACTTCCATCACATGCCTTA +
Preference number: 6 (lower is better)
Translates to: PGVYLFLGCSRW*SELYSLPSHAL
Trigger: TAAGGCATGTGATGGAAGTGAGTACAGTTCAGAGCACCACCGGGAACAGCCTAGAAACAAGTAAACCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225004.2
ENSMUST00000225962.2
CDS CAA 72 bp GTAGCTCTTCCCCGGCTAGCTCATGTTCTTGGAGAATaGAAGGTTGAACAATGGGCTCTGTTGGTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: VALPRLAHVLGE*KVEQWALLVCS
Trigger: TGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAGCCGGGGAAGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CAA 72 bp TTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATaGTTAGGTTGGCTGGCTGCTCCTGGGGTTTACTTG +
Preference number: 6 (lower is better)
Translates to: FVPQKQKLGPGL*LGWLAAPGVYL
Trigger: CAAGTAAACCCCAGGAGCAGCCAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225962.2
CDS CAA 90 bp CAGTTTGCAATATTCTCGCTGCAGCAGTTCAGCGATATAGGATGGTaGTCACACACCACCTTTCTCTCCTCCTTGGCCAAAATCCGGATG +
Preference number: 6 (lower is better)
Translates to: QFAIFSLQQFSDIGW*SHTTFLSSLAKIRM
Trigger: CATCCGGATTTTGGCCAAGGAGGAGAGAAAGGTGGTGTGTGACAACCATCCTATATCGCTGAACTGCTGCAGCGAGAATATTGCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp TCTTCCCCTGCATCCTCTTCTACGCAGCATTTGAATTaGTGGGAACTGGTACACAGACCACTGGCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SSPASSSTQHLN*WELVHRPLASK
Trigger: TTTGGAAGCCAGTGGTCTGTGTACCAGTTCCCATCAATTCAAATGCTGCGTAGAAGAGGATGCAGGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS TCA 72 bp GAAATGACTGCAGGTTTAGCTTTACTCACTGAAGGTTaGACAATGGGCTCTGTTGGTGTGCTCAGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: EMTAGLALLTEG*TMGSVGVLSAA
Trigger: AGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAGTGAGTAAAGCTAAACCTGCAGTCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224278.2
CDS CCA 72 bp CTAGCTCATGTTCTTGGAGAATTGAAGGTTGAACAATaGGCTCTGTTGGTGTGCTCAGCGCAGCTTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LAHVLGELKVEQ*ALLVCSAQLLK
Trigger: CTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CCA 72 bp ACTTTCCCAGGATCCCCAATGCCAATGATGGGATCCTaGCATGTGACATTCTCCCTTGGAATAAGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: TFPGSPMPMMGS*HVTFSLGISLS
Trigger: GCTCAAACTTATTCCAAGGGAGAATGTCACATGCCAGGATCCCATCATTGGCATTGGGGATCCTGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp AGAGTAAATATGATGTGGAACACAGCATTGCTTCCCTaGATCACTGTGGCAAGACCGAAACCCCAAGTGAGC +
Preference number: 6 (lower is better)
Translates to: RVNMMWNTALLP*ITVARPKPQVS
Trigger: GCTCACTTGGGGTTTCGGTCTTGCCACAGTGATCCAGGGAAGCAATGCTGTGTTCCACATCATATTTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp ATATTCTCGCTGCAGCAGTTCAGCGATATAGGATGGTaGTCACACACCACCTTTCTCTCCTCCTTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: IFSLQQFSDIGW*SHTTFLSSLAK
Trigger: TTTGGCCAAGGAGGAGAGAAAGGTGGTGTGTGACAACCATCCTATATCGCTGAACTGCTGCAGCGAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp CTTTGTCCCTCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTaGGCTACAGAGGTGAAGGTCACAGCTATGTTCTTACTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LCPSETEIGSRVIVR*ATEVKVTAMFLLPL
Trigger: CAGAGGCAGTAAGAACATAGCTGTGACCTTCACCTCTGTAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGAGGGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS TCA 72 bp AACAATGGGCTCTGTTGGTGTGCTCAGCGCAGCTTCTaGAGAACAAATCACAAGAAGCAGGAAGTAGAACGT +
Preference number: 6 (lower is better)
Translates to: NNGLCWCAQRSF*RTNHKKQEVER
Trigger: ACGTTCTACTTCCTGCTTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113599.2
ENSMUST00000224278.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS GCA 72 bp GAGGTCATTTCCAGCAGGAGTGCAGACTGTAGTCATTaGTATGTTCAAAATGTCAGCTTCGGTCCCTCGAAT +
Preference number: 6 (lower is better)
Translates to: EVISSRSADCSH*YVQNVSFGPSN
Trigger: ATTCGAGGGACCGAAGCTGACATTTTGAACATAGCAATGACTACAGTCTGCACTCCTGCTGGAAATGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000224278.2
ENSMUST00000226087.2
CDS GCA 72 bp TTGTTCATTGGCTTTATGAATAGATCCAGGCAGTGGTaGCGATGTAACCCGGACTACGTAGTTCACAACCAC +
Preference number: 6 (lower is better)
Translates to: LFIGFMNRSRQW*RCNPDYVVHNH
Trigger: GTGGTTGTGAACTACGTAGTCCGGGTTACATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS CCA 72 bp GACTTGTTCATTGGCTTTATGAATAGATCCAGGCAGTaGTGCCGATGTAACCCGGACTACGTAGTTCACAAC +
Preference number: 6 (lower is better)
Translates to: DLFIGFMNRSRQ*CRCNPDYVVHN
Trigger: GTTGTGAACTACGTAGTCCGGGTTACATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS CCA 72 bp TGTCAGAGCGTTTTTCTCCATAGTACCAAGACGTGTTaGAGGTCACGAACTCAGTTTCACACTCCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: CQSVFLHSTKTC*RSRTQFHTPES
Trigger: TGACTCTGGAGTGTGAAACTGAGTTCGTGACCTCCAACACGTCTTGGTACTATGGAGAAAAACGCTCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CCA 72 bp AGCTCATGTTCTTGGAGAATCGGGAAATCAAAGACCTaGGCGGAGGAAATGACTGCAGGTTTAGCTTTACTC +
Preference number: 6 (lower is better)
Translates to: SSCSWRIGKSKT*AEEMTAGLALL
Trigger: GAGTAAAGCTAAACCTGCAGTCATTTCCTCCGCCCAGGTCTTTGATTTCCCGATTCTCCAAGAACATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224278.2
CDS CAA 90 bp CTAGCTCATGTTCTTGGAGAATTGAAGGTTGAACAATGGGCTCTGTaGGTGTGCTCAGCGCAGCTTCTGAAGAACAAATCACAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: LAHVLGELKVEQWAL*VCSAQLLKNKSQEA
Trigger: TGCTTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAACATGAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CAA 90 bp TTCAGCGATATAGGATGGTTGTCACACACCACCTTTCTCTCCTCCTaGGCCAAAATCCGGATGGGAGTGACATCTAATTTTCTGACTGTT +
Preference number: 6 (lower is better)
Translates to: FSDIGWLSHTTFLSS*AKIRMGVTSNFLTV
Trigger: AACAGTCAGAAAATTAGATGTCACTCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGGTGGTGTGTGACAACCATCCTATATCGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS GCA 72 bp GGAGAATTGAAGGTTGAACAATGGGCTCTGTTGGTGTaGTCAGCGCAGCTTCTGAAGAACAAATCACAAGAA +
Preference number: 6 (lower is better)
Translates to: GELKVEQWALLV*SAQLLKNKSQE
Trigger: TTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS GCA 72 bp CTTCCCTTCCTGTTTCCATTCAATACTGCTCCAGTTTaGAATATTCTCGCTGCAGCAGTTCAGCGATATAGG +
Preference number: 6 (lower is better)
Translates to: LPFLFPFNTAPV*NILAAAVQRYR
Trigger: CCTATATCGCTGAACTGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATTGAATGGAAACAGGAAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS GCA 72 bp TACTCACTGAAGGTTGAACAATGGGCTCTGTTGGTGTaGTCAGCGCAGCTTCTGAAGAACAAATCACAAGAA +
Preference number: 6 (lower is better)
Translates to: YSLKVEQWALLV*SAQLLKNKSQE
Trigger: TTCTTGTGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAGTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224278.2
CDS CCA 72 bp GTAGCAAGTATGTCTCTCATCATTTCTGAATTCACTTaGGTGGGAACCGTTGAGAGCAAGTCAAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: VASMSLIISEFT*VGTVESKSRML
Trigger: CAGCATCCTTGACTTGCTCTCAACGGTTCCCACCCAAGTGAATTCAGAAATGATGAGAGACATACTTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp GTTCTTGGAGAATTGAAGGTTGAACAATGGGCTCTGTaGGTGTGCTCAGCGCAGCTTCTGAAGAACAAATCA +
Preference number: 6 (lower is better)
Translates to: VLGELKVEQWAL*VCSAQLLKNKS
Trigger: TGATTTGTTCTTCAGAAGCTGCGCTGAGCACACCAACAGAGCCCATTGTTCAACCTTCAATTCTCCAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225466.2
ENSMUST00000226087.2
CDS CAA 72 bp ATAGGATGGTTGTCACACACCACCTTTCTCTCCTCCTaGGCCAAAATCCGGATGGGAGTGACATCTAATTTT +
Preference number: 6 (lower is better)
Translates to: IGWLSHTTFLSS*AKIRMGVTSNF
Trigger: AAAATTAGATGTCACTCCCATCCGGATTTTGGCCAAGGAGGAGAGAAAGGTGGTGTGTGACAACCATCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp TCAGAAACAGAAATTGGGTCCCGGGTTATTGTTAGGTaGGCTACAGAGGTGAAGGTCACAGCTATGTTCTTA +
Preference number: 6 (lower is better)
Translates to: SETEIGSRVIVR*ATEVKVTAMFL
Trigger: TAAGAACATAGCTGTGACCTTCACCTCTGTAGCCAACCTAACAATAACCCGGGACCCAATTTCTGTTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS CAA 72 bp GTCAGAGTCTTTGAAGATAAACTGCTGTTGGTAGATTaGGGGGTGGCCACGTTTTATCACCATGCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: VRVFEDKLLLVD*GVATFYHHALH
Trigger: ATGAAGAGCATGGTGATAAAACGTGGCCACCCCCAAATCTACCAACAGCAGTTTATCTTCAAAGACTCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS GCA 72 bp GAATGCTTATCTTCCCTTCCTGTTTCCATTCAATACTaGTCCAGTTTGCAATATTCTCGCTGCAGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: ECLSSLPVSIQY*SSLQYSRCSSS
Trigger: TGAACTGCTGCAGCGAGAATATTGCAAACTGGAGCAGTATTGAATGGAAACAGGAAGGGAAGATAAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113599.2
ENSMUST00000225004.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 90 bp GGAGTTGTAGTCCATTTTGTAAGTATGGTTGAGGTTCTGTATGACTaGTTCATTGGCTTTATGAATAGATCCAGGCAGTGGTGCCGATGT +
Preference number: 6 (lower is better)
Translates to: GVVVHFVSMVEVLYD*FIGFMNRSRQWCRC
Trigger: ACATCGGCACCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTCATACAGAACCTCAACCATACTTACAAAATGGACTACAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2
CDS CAA 72 bp CTGACTGTTCCATATTCAAAAATATCCAATGTCACATaGCAACCATACATGCCCGCATCATGCTGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: LTVPYSKISNVT*QPYMPASCCVK
Trigger: CTTCACACAGCATGATGCGGGCATGTATGGTTGCAATGTGACATTGGATATTTTTGAATATGGAACAGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113599.2
ENSMUST00000225962.2
ENSMUST00000226087.2
CDS CAA 72 bp GTCCATTTTGTAAGTATGGTTGAGGTTCTGTATGACTaGTTCATTGGCTTTATGAATAGATCCAGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: VHFVSMVEVLYD*FIGFMNRSRQW
Trigger: CCACTGCCTGGATCTATTCATAAAGCCAATGAACAAGTCATACAGAACCTCAACCATACTTACAAAATGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113599.2
ENSMUST00000226087.2