Pregenerated sensors for ADA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017697Ensembl transcript IDs: ENSMUST00000017841.4
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTaGCTCCCCAGCCTGACACTCAGCGTAGGGCCCAGGGCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: QQPLWERIASAGKRP*LPSLTLSVGPRAPP Trigger: AGGAGGAGCCCTGGGCCCTACGCTGAGTGTCAGGCTGGGGAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR CCA 90 bp | TTAGAAGGAAGGTTTTCAATTCATGTGCATGATTGTCAAGTCCCCTaGGACCTAGCCAGGATATCCAATCAGAGGACAGACCTGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LEGRFSIHVHDCQVP*DLARISNQRTDLAS Trigger: AGAGGCCAGGTCTGTCCTCTGATTGGATATCCTGGCTAGGTCCCAGGGGACTTGACAATCATGCACATGAATTGAAAACCTTCCTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR GCA 90 bp | TTTCTTAGCATCCTAGCCAGCAGCCCCGAGACCATATTCACCATGTaGTGCAAGATACCAGTCACCAGCTGCTTTATTGAACACCATAAT | + |
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Preference number: 1 (lower is better) Translates to: FLSILASSPETIFTM*CKIPVTSCFIEHHN Trigger: ATTATGGTGTTCAATAAAGCAGCTGGTGACTGGTATCTTGCAGCACATGGTGAATATGGTCTCGGGGCTGCTGGCTAGGATGCTAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR TCA 90 bp | ATCCAATCAGAGGACAGACCTGGCCTCTCCAAGGTCTGGAAGGAATaGAGGTCAATATGTCAGAGTTGTAAAGACTTTATCCACAGGATG | + |
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Preference number: 1 (lower is better) Translates to: IQSEDRPGLSKVWKE*RSICQSCKDFIHRM Trigger: CATCCTGTGGATAAAGTCTTTACAACTCTGACATATTGACCTTCATTCCTTCCAGACCTTGGAGAGGCCAGGTCTGTCCTCTGATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCAGCCTGACACTCAGCGTAGGGCCCAGGGCTCCTCCTTTCTTAGCATCCGATTGTCAAGTCCCCTaGGACCTAGCCAGGATATCC | + |
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Preference number: 2 (lower is better) Translates to: LPSLTLSVGPRAPPFLASDCQVP*DLARIS Trigger: GGATATCCTGGCTAGGTCCCAGGGGACTTGACAATC...GGATGCTAAGAAAGGAGGAGCCCTGGGCCCTACGCTGAGTGTCAGGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATGCAGGAAAGAGACCCTaGCTCCCCAGCCTGACACTC | + |
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Preference number: 2 (lower is better) Translates to: KGAESSGASAPTAPLGKNAGKRP*LPSLTL Trigger: GAGTGTCAGGCTGGGGAGCCAGGGTCTCTTTCCTGC...ATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCACTTTATCCACAGGATaGGGCTCAGAGAAGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SKGLVKGAESSGASAPTATLSTG*GSEKWP Trigger: AGGCCACTTCTCTGAGCCTCATCCTGTGGATAAAGT...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR CCA 90 bp | AATCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGATCAGAGGACAGACCTaGCCTCTCCAAGGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: NPKDWLKGRRVQEHLLQQIRGQT*PLQGLE Trigger: TTCCAGACCTTGGAGAGGCCAGGTCTGTCCTCTGAT...CTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTAAGGTCTGGAAGGAATaGAGGTCAATATGTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: APTAPLGKNRFCRKETLAKVWKE*RSICQS Trigger: ACTCTGACATATTGACCTTCATTCCTTCCAGACCTT...AGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAGGTTTTCAATTCATGTaGATGATTGTCAAGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VQEHLLQQPLWERIASAGGFQFM*MIVKSP Trigger: AGGGGACTTGACAATCATGCACATGAATTGAAAACC...TCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR CCA 72 bp | CTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTaGCTCCCCAGCCTGACACTCAGCGTAGGGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LWERIASAGKRP*LPSLTLSVGPR Trigger: CCTGGGCCCTACGCTGAGTGTCAGGCTGGGGAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR GCA 72 bp | TCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTaGAGGAAAGAGACCCTGGCTCCCCAGCCTGACACT | + |
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Preference number: 3 (lower is better) Translates to: SAPTAPLGKNRF*RKETLAPQPDT Trigger: AGTGTCAGGCTGGGGAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR CCA 72 bp | CGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTaGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RRVQEHLLQQPL*ERIASAGKRPW Trigger: CCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGACCTGGCCTCTCCAAGGTCTGGAAGGAATGAAGGTCAATATGTCAGAGTTCTCAGAGAAGTGGCCTaGCCATCTTCAGGGGACCCG | + |
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Preference number: 3 (lower is better) Translates to: TDLASPRSGRNEGQYVRVLREVA*PSSGDP Trigger: CGGGTCCCCTGAAGATGGCAAGGCCACTTCTCTGAG...AACTCTGACATATTGACCTTCATTCCTTCCAGACCTTGGAGAGGCCAGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR GCA 72 bp | CTAGCCAGCAGCCCCGAGACCATATTCACCATGTGCTaGAAGATACCAGTCACCAGCTGCTTTATTGAACAC | + |
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Preference number: 3 (lower is better) Translates to: LASSPETIFTMC*KIPVTSCFIEH Trigger: GTGTTCAATAAAGCAGCTGGTGACTGGTATCTTGCAGCACATGGTGAATATGGTCTCGGGGCTGCTGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR GCA 72 bp | ATCCTAGCCAGCAGCCCCGAGACCATATTCACCATGTaGTGCAAGATACCAGTCACCAGCTGCTTTATTGAA | + |
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Preference number: 3 (lower is better) Translates to: ILASSPETIFTM*CKIPVTSCFIE Trigger: TTCAATAAAGCAGCTGGTGACTGGTATCTTGCAGCACATGGTGAATATGGTCTCGGGGCTGCTGGCTAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCTCACCAGCTGCTTTATaGAACACCATAATTTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SKGLVKGAESSGASAPTASPAAL*NTIILA Trigger: AGCTAAAATTATGGTGTTCAATAAAGCAGCTGGTGA...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR TCA 72 bp | GAGGACAGACCTGGCCTCTCCAAGGTCTGGAAGGAATaGAGGTCAATATGTCAGAGTTGTAAAGACTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: EDRPGLSKVWKE*RSICQSCKDFI Trigger: GATAAAGTCTTTACAACTCTGACATATTGACCTTCATTCCTTCCAGACCTTGGAGAGGCCAGGTCTGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR TCA 90 bp | CTCCCCAGCCTGACACTCAGCGTAGGGCCCAGGGCTCCTCCTTTCTTAGCATCCCGTAGGCGATCCTCTTaGTGGCCTCTCTGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LPSLTLSVGPRAPPFLASRRRSS*WPLCSP Trigger: CGGGCTGCAGAGAGGCCATCAAGAGGATCGCCTACG...GGATGCTAAGAAAGGAGGAGCCCTGGGCCCTACGCTGAGTGTCAGGCTGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR TCA 90 bp | CTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTCGATCCCAGGCGCCTGTaGGGTAGCTGGACCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LQQPLWERIASAGKRPWLDPRRL*GSWTRG Trigger: GCCCCTGGTCCAGCTACCTCACAGGCGCCTGGGATC...GAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | CTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTCCCTCAAGGGACCAGCTaGGCTGGTGGCGCATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQQPLWERIASAGKRPWLPQGTS*AGGACS Trigger: GCTGCATGCGCCACCAGCCCAGCTGGTCCCTTGAGG...GAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTCTTGGCCAGGAAGCCTaGGAGCGAGAGGGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: APTAPLGKNRFCRKETLALGQEA*EREGLV Trigger: GACAAGCCCCTCTCGCTCCCAGGCTTCCTGGCCAAG...AGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTAGGGACCAGCTGGGCTaGTGGCGCATGCAGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: APTAPLGKNRFCRKETLARDQLG*WRMQHR Trigger: TCTGTGCTGCATGCGCCACCAGCCCAGCTGGTCCCT...AGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | CTCCCCAGCCTGACACTCAGCGTAGGGCCCAGGGCTCCTCCTTTCTTAGCATCCTGTAGTAGTCAAACTTaGCCAGGAAGCCTGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LPSLTLSVGPRAPPFLASCSSQT*PGSLGA Trigger: CGCTCCCAGGCTTCCTGGCCAAGTTTGACTACTACA...GGATGCTAAGAAAGGAGGAGCCCTGGGCCCTACGCTGAGTGTCAGGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATGACCAGCTGGGCTGGTaGCGCATGCAGCACAGAATG | + |
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Preference number: 4 (lower is better) Translates to: KGAESSGASAPTAPLGKNDQLGW*RMQHRM Trigger: CATTCTGTGCTGCATGCGCCACCAGCCCAGCTGGTC...ATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| 3UTR CAA 72 bp | GACTTTATCCACAGGATGAGGCTCAGAGAAGTGGCCTaGCCATCTTCAGGGGACCCGCCCGTCAGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DFIHRMRLREVA*PSSGDPPVSLW Trigger: CCACAGACTGACGGGCGGGTCCCCTGAAGATGGCAAGGCCACTTCTCTGAGCCTCATCCTGTGGATAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | GCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTTGATGCCAAATGCTTaGTCTCCCTCCTGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AESSGASAPTAPLGKNRFLMPNA*SPSCRP Trigger: GGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAA...GAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCGCATTGGGTCCACCTTaGAATTGGCCAGCAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AESSGASAPTAPLGKNRFALGPP*NWPAGV Trigger: CACACCTGCTGGCCAATTCCAAGGTGGACCCAATGC...GAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | CTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTCCCCAGCCTGACACTCTGGTTCCAGGGCATTaGGTCCACCTTGGAATTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGKNRFCRKETLAPQPDTLVPGH*VHLGIG Trigger: GCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAG...AGTGTCAGGCTGGGGAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAATTGGCCAGCAGGTGTaGGCTATAGCGCACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQEHLLQQPLWERIASAGIGQQV*AIAHFH Trigger: GTGGAAGTGCGCTATAGCCCACACCTGCTGGCCAAT...TCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | GAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCGACCTTGATGCCAAATaGTTGCTCTCCCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ESSGASAPTAPLGKNRFCDLDAK*LLSLLQ Trigger: CTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTC...GCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR TCA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCGCCACCACGGTCTTCTaGTTGTACTTCTTACACAGC | + |
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Preference number: 4 (lower is better) Translates to: SKGLVKGAESSGASAPTAATTVF*LYFLHS Trigger: GCTGTGTAAGAAGTACAATCAGAAGACCGTGGTGGC...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAGGCTACTTCCTTCAATaGTCTCATCCCCAGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: VQEHLLQQPLWERIASAGGYFLQ*SHPQPS Trigger: ACTTGGCTGGGGATGAGACCATTGAAGGAAGTAGCC...TCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR TCA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCGTCGTCTGTGTTGAGTaGGTAGTTGGCCTTATCATT | + |
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Preference number: 4 (lower is better) Translates to: SKGLVKGAESSGASAPTAVVCVE*VVGLII Trigger: AATGATAAGGCCAACTACTCACTCAACACAGACGAC...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCCTCCTTTCTTAGCATCCTAGCCAGCAGCCCCGAGACCATATTCACCGGGCAGACCTCAAAGTaGATGTTTTCTTTCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QGSSFLSILASSPETIFTGQTSK*MFSFSS Trigger: ACTACTGAAAGAAAACATGCACTTTGAGGTCTGCCC...GGTGAATATGGTCTCGGGGCTGCTGGCTAGGATGCTAAGAAAGGAGGAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | GAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGCCCATGTCTTTCTTaGTCATCTGGTAGTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ESSGASAPTAPLGKNRFCSPCLS*SSGSQC Trigger: ACACTGACTACCAGATGACCAAGAAAGACATGGGCT...GCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCGATGCCTCTCTTCTTaGCAAAGTATAAGATGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SKGLVKGAESSGASAPTARCLSS*QSIRWF Trigger: AAACCATCTTATACTTTGGCAAGAAGAGAGGCATCG...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | ATAATAAAAATAAATCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATTGGGCTGGTGGCGCATaGAGCACAGAATGGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: IIKINPKDWLKGRRVQEHWAGGA*STEWTG Trigger: TCCGGTCCATTCTGTGCTGCATGCGCCACCAGCCCA...ATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGATTTATTTTTATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | ACAGACCTGGCCTCTCCAAGGTCTGGAAGGAATGAAGGTCAATATGTCAGAGTTGAGCTTCATCCTCGATaGTGTGATAACCATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TDLASPRSGRNEGQYVRVELHPR*CDNHVP Trigger: TGGGACATGGTTATCACACCATCGAGGATGAAGCTC...AACTCTGACATATTGACCTTCATTCCTTCCAGACCTTGGAGAGGCCAGGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR GCA 90 bp | ATAATAAAAATAAATCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATGCTTGCTCTCCCTCCTaGAGGCCCTGGTTCACAAGA | + |
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Preference number: 4 (lower is better) Translates to: IIKINPKDWLKGRRVQEHACSPS*RPWFTR Trigger: TCTTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGC...ATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGATTTATTTTTATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CCA 90 bp | AAGATACCAGTCACCAGCTGCTTTATTGAACACCATAATTTTAGCTTTAGAAGGGGTCCACCTTGGAATTaGCCAGCAGGTGTGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: KIPVTSCFIEHHNFSFRRGPPWN*PAGVGY Trigger: ATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACC...CCTTCTAAAGCTAAAATTATGGTGTTCAATAAAGCAGCTGGTGACTGGTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 90 bp | GCCCACCTCGCCAGCGTGGACGGTCCGATGAATGCCATTCTTTACTaGGCCCTCATAGGCTTCCACGTGGCCTGGGAAGAGGCTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: AHLASVDGPMNAILY*ALIGFHVAWEEATS Trigger: GGAAGTAGCCTCTTCCCAGGCCACGTGGAAGCCTATGAGGGCGCAGTAAAGAATGGCATTCATCGGACCGTCCACGCTGGCGAGGTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 90 bp | CAACCTCAGGAGAGCCCACCTCGCCAGCGTGGACGGTCCGATGAATaGCATTCTTTACTGCGCCCTCATAGGCTTCCACGTGGCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QPQESPPRQRGRSDE*HSLLRPHRLPRGLG Trigger: TCCCAGGCCACGTGGAAGCCTATGAGGGCGCAGTAAAGAATGGCATTCATCGGACCGTCCACGCTGGCGAGGTGGGCTCTCCTGAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 90 bp | ACCAGCTGGGCTGGTGGCGCATGCAGCACAGAATGGACCGGACCTTaGTGCCAAATGCTTGCTCTCCCTCCTGCAGGCCCTGGTTCACAA | + |
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Preference number: 5 (lower is better) Translates to: TSWAGGACSTEWTGP*CQMLALPPAGPGSQ Trigger: TTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTCCGGTCCATTCTGTGCTGCATGCGCCACCAGCCCAGCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | CGTCCCCTTCAGTCTGGTTCCAGGGCATTGGGTCCACCTTGGAATTaGCCAGCAGGTGTGGGCTATAGCGCACTTCCACATAGACCACGC | + |
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Preference number: 5 (lower is better) Translates to: RPLQSGSRALGPPWN*PAGVGYSALPHRPR Trigger: GCGTGGTCTATGTGGAAGTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | AACGTCATCAGGGGTGACGTCCCCTTCAGTCTGGTTCCAGGGCATTaGGTCCACCTTGGAATTGGCCAGCAGGTGTGGGCTATAGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: NVIRGDVPFSLVPGH*VHLGIGQQVWAIAH Trigger: GTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGGACGTCACCCCTGATGACGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCCTCCTTTCTTAGCATCCTAGCCAGCAGCCCCGAGACCATATTCACCGGGTCCACCTTGGAATaGGCCAGCAGGTGTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: QGSSFLSILASSPETIFTGSTLE*ASRCGL Trigger: TAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCC...GGTGAATATGGTCTCGGGGCTGCTGGCTAGGATGCTAAGAAAGGAGGAGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | GCCCGCAATCACAGGCATGTAGTAGTCAAACTTGGCCAGGAAGCCTaGGAGCGAGAGGGGCTTGTCCATGCCGATAATGTTGCGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARNHRHVVVKLGQEA*EREGLVHADNVAQL Trigger: GAGCTGCGCAACATTATCGGCATGGACAAGCCCCTCTCGCTCCCAGGCTTCCTGGCCAAGTTTGACTACTACATGCCTGTGATTGCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | CTGGTTCCAGGGCATTGGGTCCACCTTGGAATTGGCCAGCAGGTGTaGGCTATAGCGCACTTCCACATAGACCACGCCCTCCTTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LVPGHWVHLGIGQQV*AIAHFHIDHALLCL Trigger: AAGGCAAAGGAGGGCGTGGTCTATGTGGAAGTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | GACCGGACCTTGATGCCAAATGCTTGCTCTCCCTCCTGCAGGCCCTaGTTCACAAGATCCACAACGTCATCAGGGGTGACGTCCCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: DRTLMPNACSPSCRP*FTRSTTSSGVTSPS Trigger: TGAAGGGGACGTCACCCCTGATGACGTTGTGGATCTTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTCCGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | TCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCGGCATTGGGTCCACCTaGGAATTGGCCAGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: SKGLVKGAESSGASAPTAGIGST*ELASRC Trigger: ACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCC...GGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | TCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGCCCACCCTCTCTGTCTaGAGGATGTCCACAGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SAPTAPLGKNRFCRKETLPTLSV*RMSTAS Trigger: TGAGGCTGTGGACATCCTCAAGACAGAGAGGGTGGG...CAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 90 bp | CTTCATCCTCGATGGTGTGATAACCATGTCCCACCCTCTCTGTCTTaGGGATGTCCACAGCCTCACGCACAACCTCAGGAGAGCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: LHPRWCDNHVPPSLS*GCPQPHAQPQESPP Trigger: AGGTGGGCTCTCCTGAGGTTGTGCGTGAGGCTGTGGACATCCTCAAGACAGAGAGGGTGGGACATGGTTATCACACCATCGAGGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | TTCACAAGATCCACAACGTCATCAGGGGTGACGTCCCCTTCAGTCTaGTTCCAGGGCATTGGGTCCACCTTGGAATTGGCCAGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FTRSTTSSGVTSPSV*FQGIGSTLELASRC Trigger: ACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGGACGTCACCCCTGATGACGTTGTGGATCTTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | GCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCAAGATGGTTTCTGGCTaGATGGCTCCATCCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: AESSGASAPTAPLGKNRFKMVSG*MAPSRW Trigger: CCACCTGGATGGAGCCATCAAGCCAGAAACCATCTT...GAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | CTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGGAAAGAGACCCTGGCTCAGACCACGCCCTCCTTaGCCTTCATCTCCACAAACT | + |
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Preference number: 5 (lower is better) Translates to: LQQPLWERIASAGKRPWLRPRPP*PSSPQT Trigger: AGTTTGTGGAGATGAAGGCAAAGGAGGGCGTGGTCT...GAGCCAGGGTCTCTTTCCTGCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | AAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATTCTGGTTCCAGGGCATaGGGTCCACCTTGGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: KGAESSGASAPTAPLGKNSGSRA*GPPWNW Trigger: CCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGA...ATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | GAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATCGCTTCTGCAGAATGGACCGGACCTaGATGCCAAATGCTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ESSGASAPTAPLGKNRFCRMDRT*MPNACS Trigger: AGAGCAAGCATTTGGCATCAAGGTCCGGTCCATTCT...GCAGAAGCGATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 90 bp | TCAATGGTCTCATCCCCAGCCAAGTCCATAGCCACCACGGTCTTCTaGTTGTACTTCTTACACAGCTCCAACACCTCAAGGGACCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SMVSSPAKSIATTVF*LYFLHSSNTSRDQL Trigger: CAGCTGGTCCCTTGAGGTGTTGGAGCTGTGTAAGAAGTACAATCAGAAGACCGTGGTGGCTATGGACTTGGCTGGGGATGAGACCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | AAAGGGGCGGAGAGTTCAGGAGCATCTGCTCCAACAGCCCCTCTGGGAAAGAATTTGGCCTTATCATTCTaGAAGCGAACAACCGCATGC | + |
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Preference number: 5 (lower is better) Translates to: KGAESSGASAPTAPLGKNLALSF*KRTTAC Trigger: GCATGCGGTTGTTCGCTTCAAGAATGATAAGGCCAA...ATTCTTTCCCAGAGGGGCTGTTGGAGCAGATGCTCCTGAACTCTCCGCCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 90 bp | TTGCCAAAGTATAAGATGGTTTCTGGCTTGATGGCTCCATCCAGGTaGACGTGTAACTCTACTTTGGGTTTGTTGAATGCGGGTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPKYKMVSGLMAPSR*TCNSTLGLLNAGVW Trigger: CCAGACACCCGCATTCAACAAACCCAAAGTAGAGTTACACGTCCACCTGGATGGAGCCATCAAGCCAGAAACCATCTTATACTTTGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS-3UTR CAA 90 bp | ATAATAAAAATAAATCCAAAGGACTGGTTAAAGGGGCGGAGAGTTCAGGAGCATCTTGATGCCAAATGCTaGCTCTCCCTCCTGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: IIKINPKDWLKGRRVQEHLDAKC*LSLLQA Trigger: GGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAG...ATGCTCCTGAACTCTCCGCCCCTTTAACCAGTCCTTTGGATTTATTTTTATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 72 bp | CCTGGGAGCGAGAGGGGCTTGTCCATGCCGATAATGTaGCGCAGCTCCTCCACTGTATCTGCCGGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PGSERGLSMPIM*RSSSTVSAGRA Trigger: CGCCCTCCCGGCAGATACAGTGGAGGAGCTGCGCAACATTATCGGCATGGACAAGCCCCTCTCGCTCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 90 bp | GCCAGGAAGCCTGGGAGCGAGAGGGGCTTGTCCATGCCGATAATGTaGCGCAGCTCCTCCACTGTATCTGCCGGGAGGGCGATGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ARKPGSERGLSMPIM*RSSSTVSAGRAMPL Trigger: GAGAGGCATCGCCCTCCCGGCAGATACAGTGGAGGAGCTGCGCAACATTATCGGCATGGACAAGCCCCTCTCGCTCCCAGGCTTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 72 bp | GCTGGTGGCGCATGCAGCACAGAATGGACCGGACCTTaGTGCCAAATGCTTGCTCTCCCTCCTGCAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: AGGACSTEWTGP*CQMLALPPAGP Trigger: AGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTCCGGTCCATTCTGTGCTGCATGCGCCACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 72 bp | CAACCGCATGCGTCGTTTTGGGATCCCAGGCGCCTGTaGGGTAGCTGGACCAGGGGCAGACCTCAAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: QPHASFWDPRRL*GSWTRGRPQSA Trigger: TGCACTTTGAGGTCTGCCCCTGGTCCAGCTACCTCACAGGCGCCTGGGATCCCAAAACGACGCATGCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | AGGGGTGACGTCCCCTTCAGTCTGGTTCCAGGGCATTaGGTCCACCTTGGAATTGGCCAGCAGGTGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGDVPFSLVPGH*VHLGIGQQVWA Trigger: AGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGGACGTCACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 72 bp | GCCAGCGTGGACGGTCCGATGAATGCCATTCTTTACTaGGCCCTCATAGGCTTCCACGTGGCCTGGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ASVDGPMNAILY*ALIGFHVAWEE Trigger: CTCTTCCCAGGCCACGTGGAAGCCTATGAGGGCGCAGTAAAGAATGGCATTCATCGGACCGTCCACGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 72 bp | GAGAGCCCACCTCGCCAGCGTGGACGGTCCGATGAATaGCATTCTTTACTGCGCCCTCATAGGCTTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: ESPPRQRGRSDE*HSLLRPHRLPR Trigger: ACGTGGAAGCCTATGAGGGCGCAGTAAAGAATGGCATTCATCGGACCGTCCACGCTGGCGAGGTGGGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | GGGCATTGGGTCCACCTTGGAATTGGCCAGCAGGTGTaGGCTATAGCGCACTTCCACATAGACCACGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GHWVHLGIGQQV*AIAHFHIDHAL Trigger: GAGGGCGTGGTCTATGTGGAAGTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 90 bp | GTGGCGCATGCAGCACAGAATGGACCGGACCTTGATGCCAAATGCTaGCTCTCCCTCCTGCAGGCCCTGGTTCACAAGATCCACAACGTC | + |
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Preference number: 6 (lower is better) Translates to: VAHAAQNGPDLDAKC*LSLLQALVHKIHNV Trigger: GACGTTGTGGATCTTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTCCGGTCCATTCTGTGCTGCATGCGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | CCCCTTCAGTCTGGTTCCAGGGCATTGGGTCCACCTTaGAATTGGCCAGCAGGTGTGGGCTATAGCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: PLQSGSRALGPP*NWPAGVGYSAL Trigger: AAGTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | TCCACAACGTCATCAGGGGTGACGTCCCCTTCAGTCTaGTTCCAGGGCATTGGGTCCACCTTGGAATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: STTSSGVTSPSV*FQGIGSTLELA Trigger: GGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTGAAGGGGACGTCACCCCTGATGACGTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 72 bp | TCAAACTTGGCCAGGAAGCCTGGGAGCGAGAGGGGCTaGTCCATGCCGATAATGTTGCGCAGCTCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SNLARKPGSERG*SMPIMLRSSST Trigger: AGTGGAGGAGCTGCGCAACATTATCGGCATGGACAAGCCCCTCTCGCTCCCAGGCTTCCTGGCCAAGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | CAGTCTGGTTCCAGGGCATTGGGTCCACCTTGGAATTaGCCAGCAGGTGTGGGCTATAGCGCACTTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: QSGSRALGPPWN*PAGVGYSALPH Trigger: ATGTGGAAGTGCGCTATAGCCCACACCTGCTGGCCAATTCCAAGGTGGACCCAATGCCCTGGAACCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 72 bp | CATGCCGATAATGTTGCGCAGCTCCTCCACTGTATCTaGCGGGAGGGCGATGCCTCTCTTCTTGCCAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HADNVAQLLHCI*REGDASLLAKV Trigger: TACTTTGGCAAGAAGAGAGGCATCGCCCTCCCGGCAGATACAGTGGAGGAGCTGCGCAACATTATCGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 72 bp | GACCGGACCTTGATGCCAAATGCTTGCTCTCCCTCCTaGAGGCCCTGGTTCACAAGATCCACAACGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: DRTLMPNACSPS*RPWFTRSTTSS Trigger: TGATGACGTTGTGGATCTTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAAGGTCCGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | TTGATGCCAAATGCTTGCTCTCCCTCCTGCAGGCCCTaGTTCACAAGATCCACAACGTCATCAGGGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: LMPNACSPSCRP*FTRSTTSSGVT Trigger: CGTCACCCCTGATGACGTTGTGGATCTTGTGAACCAGGGCCTGCAGGAGGGAGAGCAAGCATTTGGCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 72 bp | TTGCCTTCATCTCCACAAACTCGTAGGCGATCCTCTTaGTGGCCTCTCTGCAGCCCGCAATCACAGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: LPSSPQTRRRSS*WPLCSPQSQAC Trigger: ACATGCCTGTGATTGCGGGCTGCAGAGAGGCCATCAAGAGGATCGCCTACGAGTTTGTGGAGATGAAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS GCA 72 bp | TGCGCAGCTCCTCCACTGTATCTGCCGGGAGGGCGATaGCTCTCTTCTTGCCAAAGTATAAGATGGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CAAPPLYLPGGR*LSSCQSIRWFL Trigger: CAGAAACCATCTTATACTTTGGCAAGAAGAGAGGCATCGCCCTCCCGGCAGATACAGTGGAGGAGCTGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | CACAGGCATGTAGTAGTCAAACTTGGCCAGGAAGCCTaGGAGCGAGAGGGGCTTGTCCATGCCGATAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: HRHVVVKLGQEA*EREGLVHADNV Trigger: AACATTATCGGCATGGACAAGCCCCTCTCGCTCCCAGGCTTCCTGGCCAAGTTTGACTACTACATGCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 72 bp | GGCTATAGCGCACTTCCACATAGACCACGCCCTCCTTaGCCTTCATCTCCACAAACTCGTAGGCGATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GYSALPHRPRPP*PSSPQTRRRSS Trigger: AGAGGATCGCCTACGAGTTTGTGGAGATGAAGGCAAAGGAGGGCGTGGTCTATGTGGAAGTGCGCTATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 72 bp | TCATCCCCAGCCAAGTCCATAGCCACCACGGTCTTCTaGTTGTACTTCTTACACAGCTCCAACACCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPAKSIATTVF*LYFLHSSNTSR Trigger: CCTTGAGGTGTTGGAGCTGTGTAAGAAGTACAATCAGAAGACCGTGGTGGCTATGGACTTGGCTGGGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CAA 72 bp | AGGAAGCTTGACTTCGCTGCGTTGATGTTCAGTCGCTaGAACTCCTCCTCAGTGAAGCCCATGTCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKLDFAALMFSR*NSSSVKPMSFL Trigger: CAAGAAAGACATGGGCTTCACTGAGGAGGAGTTCAAGCGACTGAACATCAACGCAGCGAAGTCAAGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS TCA 72 bp | GGTGGACTTGAAGATGAGGGGGTCGTCTGTGTTGAGTaGGTAGTTGGCCTTATCATTCTTGAAGCGAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: GGLEDEGVVCVE*VVGLIILEANN Trigger: GTTGTTCGCTTCAAGAATGATAAGGCCAACTACTCACTCAACACAGACGACCCCCTCATCTTCAAGTCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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| CDS CCA 72 bp | TATAAGATGGTTTCTGGCTTGATGGCTCCATCCAGGTaGACGTGTAACTCTACTTTGGGTTTGTTGAATGCG | + |
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Preference number: 6 (lower is better) Translates to: YKMVSGLMAPSR*TCNSTLGLLNA Trigger: CGCATTCAACAAACCCAAAGTAGAGTTACACGTCCACCTGGATGGAGCCATCAAGCCAGAAACCATCTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017841.4 |
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