RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACTL9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000092519

Ensembl transcript IDs: ENSMUST00000174088.3

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTATCACATTCCGGGCCACATGAGGCCGTAGCTCCTGAGGCACCTTaGGGAGGCTCTGTTCAGCCATGGCTGGGAGGCCGATGGGCGACA +
Preference number: 5 (lower is better)
Translates to: VSHSGPHEAVAPEAP*GGSVQPWLGGRWAT
Trigger: TGTCGCCCATCGGCCTCCCAGCCATGGCTGAACAGAGCCTCCTCAAGGTGCCTCAGGAGCTACGGCCTCATGTGGCCCGGAATGTGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 90 bp GGCCGGGAGCGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTaGTCCTTGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: GRERAASPIKVSSSD*SLVACFLGWQPRMV
Trigger: CACCATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCGCTCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 90 bp CCTGTTTCTTGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTaGGTTGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PVSWAGNPGWWPPCR*VGTVLQSLPYRCLC
Trigger: GCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 90 bp TTGGGGTGTGCCATCACCACTACGTGGTCCTCAGGGGATAGAGAATaGAGTAGCTCTGCCCTGAAGCGACCCTCCAGGCCGGTGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LGCAITTTWSSGDRE*SSSALKRPSRPVKS
Trigger: ACTCTTCACCGGCCTGGAGGGTCGCTTCAGGGCAGAGCTACTGCATTCTCTATCCCCTGAGGACCACGTAGTGGTGATGGCACACCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 90 bp GCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTTGGGACTGTCCTaGAAAGCCTACCTTACAGGTGCCTGTGCCCATGTCAATAACCAC +
Preference number: 5 (lower is better)
Translates to: ATQDGGHRVGGLGLS*KAYLTGACAHVNNH
Trigger: GTGGTTATTGACATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 90 bp GAGAAGCCAGAGCCCAGGAGCATCTCTGCTAGGAAGGCAGTAAGATaGTTTCCTGCCAGGTCCAAGCGTTGGATGGCATGGGGTAGGTTG +
Preference number: 5 (lower is better)
Translates to: EKPEPRSISARKAVR*FPARSKRWMAWGRL
Trigger: CAACCTACCCCATGCCATCCAACGCTTGGACCTGGCAGGAAACCATCTTACTGCCTTCCTAGCAGAGATGCTCCTGGGCTCTGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 90 bp TCCTTTCCCAGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATTaGTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCT +
Preference number: 5 (lower is better)
Translates to: SFPRVTVRPSGSFRD*LHSSSGRACSFWKS
Trigger: AGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS TCA 90 bp GATGGAATAGGAGCTCTGGGCACTGGAATAACTCCTTTCCCAGAGTaGCAGTCCGTCCATCAGGAAGCTTCAGGGATTGCTTGCACTCCT +
Preference number: 5 (lower is better)
Translates to: DGIGALGTGITPFPE*QSVHQEASGIACTP
Trigger: AGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGAGTTATTCCAGTGCCCAGAGCTCCTATTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 90 bp TTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCTaGGGCCAAATAGCAGTAATGATGTTTGATGTTCTCCACCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLALLIWAGLFLLEI*GQIAVMMFDVLHQV
Trigger: GACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS TCA 90 bp CCTGTTCCTTTTGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTaGTGTTCTCCACCAAGTCCAGGTCCTCCTGTTGCAACGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PVPFGNLGPNSSNDV*CSPPSPGPPVATRS
Trigger: GCTTCTCGTTGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 90 bp GAGCGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTGGTCCTaGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATGGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: ERAASPIKVSSSDWS*VACFLGWQPRMVAT
Trigger: GGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 72 bp GCCATCACCACTACGTGGTCCTCAGGGGATAGAGAATaGAGTAGCTCTGCCCTGAAGCGACCCTCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: AITTTWSSGDRE*SSSALKRPSRP
Trigger: CGGCCTGGAGGGTCGCTTCAGGGCAGAGCTACTGCATTCTCTATCCCCTGAGGACCACGTAGTGGTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp TGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTaGGTTGGGACTGTCCTGCAAAGCCTACCTTACAGG +
Preference number: 6 (lower is better)
Translates to: WAGNPGWWPPCR*VGTVLQSLPYR
Trigger: CCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 72 bp CTGGCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTaGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: LATQDGGHRVGG*GLSCKAYLTGA
Trigger: GGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 72 bp GATGGTGGCCACCGTGTAGGTGGGTTGGGACTGTCCTaGAAAGCCTACCTTACAGGTGCCTGTGCCCATGTC +
Preference number: 6 (lower is better)
Translates to: DGGHRVGGLGLS*KAYLTGACAHV
Trigger: GACATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp CGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTaGTCCTTGGTAGCCTGTTTCTTGGGCTGGCAACCC +
Preference number: 6 (lower is better)
Translates to: RAASPIKVSSSD*SLVACFLGWQP
Trigger: GGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp GAATGGAGCCCCCAATCCACACAGAGAGGTTCCTGTTaGGGTGTGCCATCACCACTACGTGGTCCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: EWSPQSTQRGSC*GVPSPLRGPQG
Trigger: CCCCTGAGGACCACGTAGTGGTGATGGCACACCCCAACAGGAACCTCTCTGTGTGGATTGGGGGCTCCATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 90 bp TTTCTTGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTaGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCCTGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: FLGLATQDGGHRVGG*GLSCKAYLTGACAH
Trigger: ATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 90 bp TGTCTCCATATTAGTTCCGCAGCTTCCCAGTCCACCACAATGCCATaGCGAATAGGCTTCACCAACCTCAGTTCTGGCCGGGAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: CLHISSAASQSTTMP*RIGFTNLSSGRERA
Trigger: CGCCCGCTCCCGGCCAGAACTGAGGTTGGTGAAGCCTATTCGCAATGGCATTGTGGTGGACTGGGAAGCTGCGGAACTAATATGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 72 bp AGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATTaGTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: RVTVRPSGSFRD*LHSSSGRACSF
Trigger: AAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp TGTACTAGAGGTCAGGGGAAGAGGCCCATCAGTCTCTaGGGAGGGCTGGAACTTTGGGTGTCCATTGACATC +
Preference number: 6 (lower is better)
Translates to: CTRGQGKRPISL*GGLELWVSIDI
Trigger: GATGTCAATGGACACCCAAAGTTCCAGCCCTCCCCAGAGACTGATGGGCCTCTTCCCCTGACCTCTAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 72 bp GCCTCCCCAATAAAAGTTTCCAGCTCCGACTGGTCCTaGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATG +
Preference number: 6 (lower is better)
Translates to: ASPIKVSSSDWS*VACFLGWQPRM
Trigger: CATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 90 bp CTCCTTTCCCAGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATaGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATC +
Preference number: 6 (lower is better)
Translates to: LLSQSDSPSIRKLQG*LALLIWAGLFLLEI
Trigger: GATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 72 bp ATTAGTTCCGCAGCTTCCCAGTCCACCACAATGCCATaGCGAATAGGCTTCACCAACCTCAGTTCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: ISSAASQSTTMP*RIGFTNLSSGR
Trigger: CCGGCCAGAACTGAGGTTGGTGAAGCCTATTCGCAATGGCATTGTGGTGGACTGGGAAGCTGCGGAACTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 72 bp ATGTTTGATGTTCTCCACCAAGTCCAGGTCCTCCTGTaGCAACGAGAAGCCAGAGCCCAGGAGCATCTCTGC +
Preference number: 6 (lower is better)
Translates to: MFDVLHQVQVLL*QREARAQEHLC
Trigger: GCAGAGATGCTCCTGGGCTCTGGCTTCTCGTTGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS GCA 72 bp GGTGGGAGCCTGTCTCCCACCATACTGAGGGAATCTTaGTGTAGACTCTTGCTCACCATGAGTGTACTAGAG +
Preference number: 6 (lower is better)
Translates to: GGSLSPTILRES*CRLLLTMSVLE
Trigger: CTCTAGTACACTCATGGTGAGCAAGAGTCTACAGCAAGATTCCCTCAGTATGGTGGGAGACAGGCTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp TGTGCCCATGTCAATAACCACAGCACCAGTTTTTGGTaGGAGCCTGTCTCCCACCATACTGAGGGAATCTTG +
Preference number: 6 (lower is better)
Translates to: CAHVNNHSTSFW*EPVSHHTEGIL
Trigger: CAAGATTCCCTCAGTATGGTGGGAGACAGGCTCCCACCAAAAACTGGTGCTGTGGTTATTGACATGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp AGGGTGGATCTGAAAACAGTAGAGGGTGCTCATGGGTaGCTACTTGGAGATCATGTTCCAAGATGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: RVDLKTVEGAHG*LLGDHVPRCVS
Trigger: GGAGACACATCTTGGAACATGATCTCCAAGTAGCCACCCATGAGCACCCTCTACTGTTTTCAGATCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp CTTTCTTCATATTGTTCCCGTAGGACCCAACAGGACTaGAAAGCATGCAATGAGGCTAGAATGGAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: LSSYCSRRTQQD*KACNEARMEPP
Trigger: TGGGGGCTCCATTCTAGCCTCATTGCATGCTTTCCAGTCCTGTTGGGTCCTACGGGAACAATATGAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 90 bp CTTCAGGGATTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTaGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTGATGTTCTC +
Preference number: 6 (lower is better)
Translates to: LQGLLALLIWAGLFL*EIWGQIAVMMFDVL
Trigger: GAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp CTGAAGGGTGGATCTGAAAACAGTAGAGGGTGCTCATaGGTGGCTACTTGGAGATCATGTTCCAAGATGTGT +
Preference number: 6 (lower is better)
Translates to: LKGGSENSRGCS*VATWRSCSKMC
Trigger: ACACATCTTGGAACATGATCTCCAAGTAGCCACCCATGAGCACCCTCTACTGTTTTCAGATCCACCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CCA 72 bp CTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCTaGGGCCAAATAGCAGTAATGATGTTTGATGTTCTC +
Preference number: 6 (lower is better)
Translates to: LLIWAGLFLLEI*GQIAVMMFDVL
Trigger: GAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS CAA 72 bp TTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTaGGAAATCTGGGGCCAAATAGCAGTAATGATGTTT +
Preference number: 6 (lower is better)
Translates to: LLALLIWAGLFL*EIWGQIAVMMF
Trigger: AAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3
CDS TCA 72 bp TTTGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTaGTGTTCTCCACCAAGTCCAGGTCCTCCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: FGNLGPNSSNDV*CSPPSPGPPVA
Trigger: TGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174088.3