Pregenerated sensors for ACTL9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092519Ensembl transcript IDs: ENSMUST00000174088.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | GTATCACATTCCGGGCCACATGAGGCCGTAGCTCCTGAGGCACCTTaGGGAGGCTCTGTTCAGCCATGGCTGGGAGGCCGATGGGCGACA | + |
Preference number: 5 (lower is better) Translates to: VSHSGPHEAVAPEAP*GGSVQPWLGGRWAT Trigger: TGTCGCCCATCGGCCTCCCAGCCATGGCTGAACAGAGCCTCCTCAAGGTGCCTCAGGAGCTACGGCCTCATGTGGCCCGGAATGTGATAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 90 bp | GGCCGGGAGCGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTaGTCCTTGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATGGTG | + |
Preference number: 5 (lower is better) Translates to: GRERAASPIKVSSSD*SLVACFLGWQPRMV Trigger: CACCATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCGCTCCCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 90 bp | CCTGTTTCTTGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTaGGTTGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCCTGTGC | + |
Preference number: 5 (lower is better) Translates to: PVSWAGNPGWWPPCR*VGTVLQSLPYRCLC Trigger: GCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 90 bp | TTGGGGTGTGCCATCACCACTACGTGGTCCTCAGGGGATAGAGAATaGAGTAGCTCTGCCCTGAAGCGACCCTCCAGGCCGGTGAAGAGT | + |
Preference number: 5 (lower is better) Translates to: LGCAITTTWSSGDRE*SSSALKRPSRPVKS Trigger: ACTCTTCACCGGCCTGGAGGGTCGCTTCAGGGCAGAGCTACTGCATTCTCTATCCCCTGAGGACCACGTAGTGGTGATGGCACACCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 90 bp | GCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTTGGGACTGTCCTaGAAAGCCTACCTTACAGGTGCCTGTGCCCATGTCAATAACCAC | + |
Preference number: 5 (lower is better) Translates to: ATQDGGHRVGGLGLS*KAYLTGACAHVNNH Trigger: GTGGTTATTGACATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 90 bp | GAGAAGCCAGAGCCCAGGAGCATCTCTGCTAGGAAGGCAGTAAGATaGTTTCCTGCCAGGTCCAAGCGTTGGATGGCATGGGGTAGGTTG | + |
Preference number: 5 (lower is better) Translates to: EKPEPRSISARKAVR*FPARSKRWMAWGRL Trigger: CAACCTACCCCATGCCATCCAACGCTTGGACCTGGCAGGAAACCATCTTACTGCCTTCCTAGCAGAGATGCTCCTGGGCTCTGGCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 90 bp | TCCTTTCCCAGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATTaGTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCT | + |
Preference number: 5 (lower is better) Translates to: SFPRVTVRPSGSFRD*LHSSSGRACSFWKS Trigger: AGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS TCA 90 bp | GATGGAATAGGAGCTCTGGGCACTGGAATAACTCCTTTCCCAGAGTaGCAGTCCGTCCATCAGGAAGCTTCAGGGATTGCTTGCACTCCT | + |
Preference number: 5 (lower is better) Translates to: DGIGALGTGITPFPE*QSVHQEASGIACTP Trigger: AGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGAGTTATTCCAGTGCCCAGAGCTCCTATTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 90 bp | TTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCTaGGGCCAAATAGCAGTAATGATGTTTGATGTTCTCCACCAAGTC | + |
Preference number: 5 (lower is better) Translates to: LLALLIWAGLFLLEI*GQIAVMMFDVLHQV Trigger: GACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS TCA 90 bp | CCTGTTCCTTTTGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTaGTGTTCTCCACCAAGTCCAGGTCCTCCTGTTGCAACGAGAAGC | + |
Preference number: 5 (lower is better) Translates to: PVPFGNLGPNSSNDV*CSPPSPGPPVATRS Trigger: GCTTCTCGTTGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 90 bp | GAGCGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTGGTCCTaGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATGGTGGCCACC | + |
Preference number: 6 (lower is better) Translates to: ERAASPIKVSSSDWS*VACFLGWQPRMVAT Trigger: GGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 72 bp | GCCATCACCACTACGTGGTCCTCAGGGGATAGAGAATaGAGTAGCTCTGCCCTGAAGCGACCCTCCAGGCCG | + |
Preference number: 6 (lower is better) Translates to: AITTTWSSGDRE*SSSALKRPSRP Trigger: CGGCCTGGAGGGTCGCTTCAGGGCAGAGCTACTGCATTCTCTATCCCCTGAGGACCACGTAGTGGTGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | TGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTaGGTTGGGACTGTCCTGCAAAGCCTACCTTACAGG | + |
Preference number: 6 (lower is better) Translates to: WAGNPGWWPPCR*VGTVLQSLPYR Trigger: CCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 72 bp | CTGGCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTaGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCC | + |
Preference number: 6 (lower is better) Translates to: LATQDGGHRVGG*GLSCKAYLTGA Trigger: GGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 72 bp | GATGGTGGCCACCGTGTAGGTGGGTTGGGACTGTCCTaGAAAGCCTACCTTACAGGTGCCTGTGCCCATGTC | + |
Preference number: 6 (lower is better) Translates to: DGGHRVGGLGLS*KAYLTGACAHV Trigger: GACATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | CGGGCGGCCTCCCCAATAAAAGTTTCCAGCTCCGACTaGTCCTTGGTAGCCTGTTTCTTGGGCTGGCAACCC | + |
Preference number: 6 (lower is better) Translates to: RAASPIKVSSSD*SLVACFLGWQP Trigger: GGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGCCGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | GAATGGAGCCCCCAATCCACACAGAGAGGTTCCTGTTaGGGTGTGCCATCACCACTACGTGGTCCTCAGGGG | + |
Preference number: 6 (lower is better) Translates to: EWSPQSTQRGSC*GVPSPLRGPQG Trigger: CCCCTGAGGACCACGTAGTGGTGATGGCACACCCCAACAGGAACCTCTCTGTGTGGATTGGGGGCTCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 90 bp | TTTCTTGGGCTGGCAACCCAGGATGGTGGCCACCGTGTAGGTGGGTaGGGACTGTCCTGCAAAGCCTACCTTACAGGTGCCTGTGCCCAT | + |
Preference number: 6 (lower is better) Translates to: FLGLATQDGGHRVGG*GLSCKAYLTGACAH Trigger: ATGGGCACAGGCACCTGTAAGGTAGGCTTTGCAGGACAGTCCCAACCCACCTACACGGTGGCCACCATCCTGGGTTGCCAGCCCAAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 90 bp | TGTCTCCATATTAGTTCCGCAGCTTCCCAGTCCACCACAATGCCATaGCGAATAGGCTTCACCAACCTCAGTTCTGGCCGGGAGCGGGCG | + |
Preference number: 6 (lower is better) Translates to: CLHISSAASQSTTMP*RIGFTNLSSGRERA Trigger: CGCCCGCTCCCGGCCAGAACTGAGGTTGGTGAAGCCTATTCGCAATGGCATTGTGGTGGACTGGGAAGCTGCGGAACTAATATGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 72 bp | AGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATTaGTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTT | + |
Preference number: 6 (lower is better) Translates to: RVTVRPSGSFRD*LHSSSGRACSF Trigger: AAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | TGTACTAGAGGTCAGGGGAAGAGGCCCATCAGTCTCTaGGGAGGGCTGGAACTTTGGGTGTCCATTGACATC | + |
Preference number: 6 (lower is better) Translates to: CTRGQGKRPISL*GGLELWVSIDI Trigger: GATGTCAATGGACACCCAAAGTTCCAGCCCTCCCCAGAGACTGATGGGCCTCTTCCCCTGACCTCTAGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 72 bp | GCCTCCCCAATAAAAGTTTCCAGCTCCGACTGGTCCTaGGTAGCCTGTTTCTTGGGCTGGCAACCCAGGATG | + |
Preference number: 6 (lower is better) Translates to: ASPIKVSSSDWS*VACFLGWQPRM Trigger: CATCCTGGGTTGCCAGCCCAAGAAACAGGCTACCAAGGACCAGTCGGAGCTGGAAACTTTTATTGGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 90 bp | CTCCTTTCCCAGAGTGACAGTCCGTCCATCAGGAAGCTTCAGGGATaGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATC | + |
Preference number: 6 (lower is better) Translates to: LLSQSDSPSIRKLQG*LALLIWAGLFLLEI Trigger: GATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAGCTTCCTGATGGACGGACTGTCACTCTGGGAAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 72 bp | ATTAGTTCCGCAGCTTCCCAGTCCACCACAATGCCATaGCGAATAGGCTTCACCAACCTCAGTTCTGGCCGG | + |
Preference number: 6 (lower is better) Translates to: ISSAASQSTTMP*RIGFTNLSSGR Trigger: CCGGCCAGAACTGAGGTTGGTGAAGCCTATTCGCAATGGCATTGTGGTGGACTGGGAAGCTGCGGAACTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 72 bp | ATGTTTGATGTTCTCCACCAAGTCCAGGTCCTCCTGTaGCAACGAGAAGCCAGAGCCCAGGAGCATCTCTGC | + |
Preference number: 6 (lower is better) Translates to: MFDVLHQVQVLL*QREARAQEHLC Trigger: GCAGAGATGCTCCTGGGCTCTGGCTTCTCGTTGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS GCA 72 bp | GGTGGGAGCCTGTCTCCCACCATACTGAGGGAATCTTaGTGTAGACTCTTGCTCACCATGAGTGTACTAGAG | + |
Preference number: 6 (lower is better) Translates to: GGSLSPTILRES*CRLLLTMSVLE Trigger: CTCTAGTACACTCATGGTGAGCAAGAGTCTACAGCAAGATTCCCTCAGTATGGTGGGAGACAGGCTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | TGTGCCCATGTCAATAACCACAGCACCAGTTTTTGGTaGGAGCCTGTCTCCCACCATACTGAGGGAATCTTG | + |
Preference number: 6 (lower is better) Translates to: CAHVNNHSTSFW*EPVSHHTEGIL Trigger: CAAGATTCCCTCAGTATGGTGGGAGACAGGCTCCCACCAAAAACTGGTGCTGTGGTTATTGACATGGGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | AGGGTGGATCTGAAAACAGTAGAGGGTGCTCATGGGTaGCTACTTGGAGATCATGTTCCAAGATGTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: RVDLKTVEGAHG*LLGDHVPRCVS Trigger: GGAGACACATCTTGGAACATGATCTCCAAGTAGCCACCCATGAGCACCCTCTACTGTTTTCAGATCCACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | CTTTCTTCATATTGTTCCCGTAGGACCCAACAGGACTaGAAAGCATGCAATGAGGCTAGAATGGAGCCCCCA | + |
Preference number: 6 (lower is better) Translates to: LSSYCSRRTQQD*KACNEARMEPP Trigger: TGGGGGCTCCATTCTAGCCTCATTGCATGCTTTCCAGTCCTGTTGGGTCCTACGGGAACAATATGAAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 90 bp | CTTCAGGGATTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTaGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTGATGTTCTC | + |
Preference number: 6 (lower is better) Translates to: LQGLLALLIWAGLFL*EIWGQIAVMMFDVL Trigger: GAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAATCCCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | CTGAAGGGTGGATCTGAAAACAGTAGAGGGTGCTCATaGGTGGCTACTTGGAGATCATGTTCCAAGATGTGT | + |
Preference number: 6 (lower is better) Translates to: LKGGSENSRGCS*VATWRSCSKMC Trigger: ACACATCTTGGAACATGATCTCCAAGTAGCCACCCATGAGCACCCTCTACTGTTTTCAGATCCACCCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CCA 72 bp | CTCCTCATCTGGGCGGGCCTGTTCCTTTTGGAAATCTaGGGCCAAATAGCAGTAATGATGTTTGATGTTCTC | + |
Preference number: 6 (lower is better) Translates to: LLIWAGLFLLEI*GQIAVMMFDVL Trigger: GAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS CAA 72 bp | TTGCTTGCACTCCTCATCTGGGCGGGCCTGTTCCTTTaGGAAATCTGGGGCCAAATAGCAGTAATGATGTTT | + |
Preference number: 6 (lower is better) Translates to: LLALLIWAGLFL*EIWGQIAVMMF Trigger: AAACATCATTACTGCTATTTGGCCCCAGATTTCCAAAAGGAACAGGCCCGCCCAGATGAGGAGTGCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |
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CDS TCA 72 bp | TTTGGAAATCTGGGGCCAAATAGCAGTAATGATGTTTaGTGTTCTCCACCAAGTCCAGGTCCTCCTGTTGCA | + |
Preference number: 6 (lower is better) Translates to: FGNLGPNSSNDV*CSPPSPGPPVA Trigger: TGCAACAGGAGGACCTGGACTTGGTGGAGAACATCAAACATCATTACTGCTATTTGGCCCCAGATTTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174088.3 |