Pregenerated sensors for ACAD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027710Ensembl transcript IDs: ENSMUST00000011492.15, ENSMUST00000196648.2, ENSMUST00000197588.5
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTAATGGACATTTTCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTaGGGTGGACAACACCAAGATCGCCTGTTAGCCCCAGGTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: SNGHFPQACWHCRQG*GGQHQDRLLAPGPQ Trigger: CTGTGGACCTGGGGCTAACAGGCGATCTTGGTGTTGTCCACCCCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGAAAATGTCCATTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATTGAGTGTATAAGGTaGAGGACCTGTGGAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFSSWVLSLAPTLGALCSIECIR*RTCGTQ Trigger: CTGAGTTCCACAGGTCCTTCACCTTATACACTCAAT...GGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCCAAACAAGACTAAGAACTACTaGGTACTCAGCTCTCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TPGWDSLRMVHPFVLSPNKTKNY*VLSSQW Trigger: CCACTGAGAGCTGAGTACCCAGTAGTTCTTAGTCTT...GTTTGGAGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR CAA 90 bp | CCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTaGCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PVFHLIDDCEHPLLY*PGTGIASQETAISG Trigger: CCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATAAGATGGAACACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR TCA 90 bp | TCTGTATTTGCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCGTAAAAAGGAATTTCTaGCCACAGGCCAGCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SVFARHWHSLSGDSYIRVVKRNF*PQASST Trigger: TGTAGAGCTGGCCTGTGGTCAGAAATTCCTTTTTAC...GACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGCAAATACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR GCA 90 bp | ACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCCAAACTTTAGAAGGAATAGCTaGCCAAATCTTAGTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: TPGWDSLRMVHPFVLSPNFRRNS*PNLSLL Trigger: CAGTAAACTAAGATTTGGGCAGCTATTCCTTCTAAA...GTTTGGAGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTATAGATCTTTCTTCAACGATTTaGCTGGTACTTCCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGTFSSSYIGGPVFHLIDLSSTI*LVLPSF Trigger: GAAGGAAGGAAGTACCAGCCAAATCGTTGAAGAAAG...ATCTATAAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR GCA 90 bp | TGGTCTTCCTTCTTGATTTTCTTATGTAAAAAGGAATTTCTGACCACAGGCCAGGGGGCATATAAAGTTTaGAAGACCAAGGGGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: WSSFLIFLCKKEFLTTGQGAYKV*KTKGPR Trigger: TCTTGGCCCCTTGGTCTTGCAAACTTTATATGCCCC...CTGGCCTGTGGTCAGAAATTCCTTTTTACATAAGAAAATCAAGAAGGAAGACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR TCA 90 bp | AACACTAAGCAAGAGAGGAAGTTAAAACAAACACTACAAAATCAACAGTGGCAATACAGTCCACACAGATaGCCTCAAGGTCTGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTKQERKLKQTLQNQQWQYSPHR*PQGLSC Trigger: ACAAGACAGACCTTGAGGTCATCTGTGTGGACTGTA...TTGCCACTGTTGATTTTGTAGTGTTTGTTTTAACTTCCTCTCTTGCTTAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR TCA 90 bp | GTCCATCCTTTTGTCTTATCTCCAAACTTTGTCTCTGTAACTGCTTCTAGGAGTAATCTTAGTTTACTGTaGGCCTTGTGTCTTAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VHPFVLSPNFVSVTASRSNLSLL*ALCLKG Trigger: GCCTTTAAGACACAAGGCTCACAGTAAACTAAGATT...ACTCCTAGAAGCAGTTACAGAGACAAAGTTTGGAGATAAGACAAAAGGATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTTCTTTCTTCAACGATTTGGCTGGTACTTCCTTCCTTCCAGGAGATGGCCAAAACCTAACTATTaGTTTTGCTCAGAGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: FSFFLQRFGWYFLPSRRWPKPNY*FCSEKK Trigger: TTTCTTCTCTGAGCAAAAGCAATAGTTAGGTTTTGG...CCATCTCCTGGAAGGAAGGAAGTACCAGCCAAATCGTTGAAGAAAGAAAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR-3UTR GCA 90 bp | TGGTCTTCCTTCTTGATTTTCTTATGTAAAAAGGAATTTCTGACCACAGGCCAGCCTAACTATTGCTTTTaGTCAGAGAAGAAAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: WSSFLIFLCKKEFLTTGQPNYCF*SEKKVF Trigger: AAACACTTTCTTCTCTGAGCAAAAGCAATAGTTAGG...CTGGCCTGTGGTCAGAAATTCCTTTTTACATAAGAAAATCAAGAAGGAAGACCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR CCA 72 bp | TCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTGGGGTaGACAACACCAAGATCGCCTGTTAGCCCCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: SSSLLALSPRLG*TTPRSPVSPRS Trigger: GGACCTGGGGCTAACAGGCGATCTTGGTGTTGTCCACCCCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| 3UTR-3UTR CAA 90 bp | GGATGGACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTATCCACTCCCACTTCTaGGCCCTAGTGTTTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: GWTPGWDSLRMVHPFVLSIHSHF*ALVFPL Trigger: CAGGGGAAACACTAGGGCCAAGAAGTGGGAGTGGAT...AGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGTCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR CCA 72 bp | CATTTTCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTaGGGTGGACAACACCAAGATCGCCTGTTAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: HFPQACWHCRQG*GGQHQDRLLAP Trigger: TGGGGCTAACAGGCGATCTTGGTGTTGTCCACCCCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGAAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| 3UTR-3UTR CAA 90 bp | CGCCAAGGCTGGGGTGGACAACACCAAGATCGCCTGTTAGCCCCAGGTCCACAGATGACTGTGGTCACATaGCCACTTTTAAGCTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: RQGWGGQHQDRLLAPGPQMTVVT*PLLSSL Trigger: CAAAGAGCTTAAAAGTGGCAATGTGACCACAGTCAT...CTGTGGACCTGGGGCTAACAGGCGATCTTGGTGTTGTCCACCCCAGCCTTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| 3UTR CCA 72 bp | AATCTTGCTGGCATATGCAATAGTGTCTGCATTTGGTaGCTGATTATGGGATGGACCCCTGGGTGGGACAGT | + |
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Preference number: 3 (lower is better) Translates to: NLAGICNSVCIW*LIMGWTPGWDS Trigger: ACTGTCCCACCCAGGGGTCCATCCCATAATCAGCCACCAAATGCAGACACTATTGCATATGCCAGCAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR CCA 72 bp | CAAAATCTTGCTGGCATATGCAATAGTGTCTGCATTTaGTGGCTGATTATGGGATGGACCCCTGGGTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QNLAGICNSVCI*WLIMGWTPGWD Trigger: GTCCCACCCAGGGGTCCATCCCATAATCAGCCACCAAATGCAGACACTATTGCATATGCCAGCAAGATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR GCA 72 bp | TTTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTaGATTTGGTGGCTGATTATGGGATGGACCCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: FQQNLAGICNSV*IWWLIMGWTPG Trigger: CCCAGGGGTCCATCCCATAATCAGCCACCAAATGCAGACACTATTGCATATGCCAGCAAGATTTTGCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| 3UTR CCA 72 bp | GGTATAGACTCAACTTCTCAGGAGTTTCTTTATACATaGTTTAGAAGGAATAGCTGCCCAAATCTTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: GIDSTSQEFLYT*FRRNSCPNLSL Trigger: TAAACTAAGATTTGGGCAGCTATTCCTTCTAAACCATGTATAAAGAAACTCCTGAGAAGTTGAGTCTATACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | TTAAAGGCGGGCCCATGTCCACTGAGATGTATCATGCAGCCACACACAGGAGCCGCCTCGCTCACACACTaGCAGGCAGCCTCAGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: LKAGPCPLRCIMQPHTGAASLTH*QAASEL Trigger: TAGCTCTGAGGCTGCCTGGCAGTGTGTGAGCGAGGC...GGCTCCTGTGTGTGGCTGCATGATACATCTCAGTGGACATGGGCCCGCCTTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR CCA 90 bp | GGATGGACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTTTGAGGCCGATAGCCTaGTGTGCTGCCAGGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GWTPGWDSLRMVHPFVLSLRPIA*CAARVT Trigger: GGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAA...AGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGTCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | TCGCCAAGGCTGGGGTGGACAACACCAAGATCGCCTGTTAGCCCCAGGTCCACAATGCCTTCTGAGCCATaGGCGCAAACTTTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPRLGWTTPRSPVSPRSTMPSEP*AQTFPG Trigger: TCCAGGAAAAGTTTGCGCTCATGGCTCAGAAGGCAT...TGTGGACCTGGGGCTAACAGGCGATCTTGGTGTTGTCCACCCCAGCCTTGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR TCA 90 bp | TTCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTGGGGTGGACAACACCAAGATCGTCCTTCATGTAGCCTaGGCCCCCAAGGATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLKLVGTVAKAGVDNTKIVLHVA*APKDLQ Trigger: CTGCAGATCCTTGGGGGCTCAGGCTACATGAAGGAC...GATCTTGGTGTTGTCCACCCCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR GCA 90 bp | TTCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTGGGGTGGACAACACCAAGATCCACCTTCACCATGGCTaGCTCGATAGAGCAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: FLKLVGTVAKAGVDNTKIHLHHG*LDRAVG Trigger: CCCGACTGCTCTATCGAGGCAGCCATGGTGAAGGTG...GATCTTGGTGTTGTCCACCCCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR GCA 90 bp | CAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTGCCGATAGCCTGGTGTaGTGCCAGGGTCACCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QLLGTFSSSYIGGPVFHLADSLV*CQGHRD Trigger: ATCACGGTGACCCTGGCAGCACACCAGGCTATCGGC...AAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | CCGGCCAAAGTAATGGACATTTTCCTCAAGCTTGTTGGCACTGTCGCCAAGGCTGCCTCGCTCACACACTaGCAGGCAGCCTCAGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PAKVMDIFLKLVGTVAKAASLTH*QAASEL Trigger: TAGCTCTGAGGCTGCCTGGCAGTGTGTGAGCGAGGC...AGCCTTGGCGACAGTGCCAACAAGCTTGAGGAAAATGTCCATTACTTTGGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR CCA 90 bp | CTATATCCTCCCCGTGGCCCCCTGCTTCCCTACCCATCCACTCCCACTTCTTGGGTTTGGGCAGATACTTaGCCTTCTGTTCCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: LYPPRGPLLPYPSTPTSWVWADT*PSVPHC Trigger: GCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAAC...CCAAGAAGTGGGAGTGGATGGGTAGGGAAGCAGGGGGCCACGGGGAGGATATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | CAAGATCGCCTGTTAGCCCCAGGTCCACAGTTCGGCCCAGAGAATCCCGAAGTTAGGATGCGTCCAGCATaGTGCAGGCCTCAAAGATTA | + |
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Preference number: 4 (lower is better) Translates to: QDRLLAPGPQFGPENPEVRMRPA*CRPQRL Trigger: TAATCTTTGAGGCCTGCAGCATGCTGGACGCATCCT...AACTTCGGGATTCTCTGGGCCGAACTGTGGACCTGGGGCTAACAGGCGATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTCTTTCTTCAACGATTTGGCTGGTACTTCCTTCCTTCCAGGAGATGGAGCAGCTCTGCAGGCTaGTGTGCAGCGGGCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: FSFFLQRFGWYFLPSRRWSSSAG*CAAGGA Trigger: GGCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCT...CCATCTCCTGGAAGGAAGGAAGTACCAGCCAAATCGTTGAAGAAAGAAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR CCA 90 bp | CTATATCCTCCCCGTGGCCCCCTGCTTCCCTACCCATCCACTCCCACTTCTTGGACTGACCTCTGGAAATaGGAAAACTCCTTTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LYPPRGPLLPYPSTPTSWTDLWK*ENSFLL Trigger: GAGCAGAAAGGAGTTTTCCCATTTCCAGAGGTCAGT...CCAAGAAGTGGGAGTGGATGGGTAGGGAAGCAGGGGGCCACGGGGAGGATATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR CCA 90 bp | GCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCCTTTCAGCACCCCAGACGACAGTTTaGGCAGATACTTGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARHWHSLSGDSYIRVLSAPQTTV*ADTWPS Trigger: AGAAGGCCAAGTATCTGCCCAAACTGTCGTCTGGGG...TGCTGAAAGGACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGGTCCACAGTTCGGCCCAGAGAATCCCGAAGTTTCCGACCAATCGTCATTACGTATGCCTTCTaGGCCATGAGCGCAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: SPRSTVRPRESRSFRPIVITYAF*AMSANF Trigger: AAAGTTTGCGCTCATGGCTCAGAAGGCATACGTAAT...GACGATTGGTCGGAAACTTCGGGATTCTCTGGGCCGAACTGTGGACCTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR TCA 90 bp | GTTCGGCCCAGAGAATCCCGAAGTTTCCGACCAATCGTCTCCATGACTGTGGTCCTAGCATCCCTGAAGTaGGGTAAGCCATACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VRPRESRSFRPIVSMTVVLASLK*GKPYSP Trigger: TGGAGAGTATGGCTTACCTCACTTCAGGGATGCTAG...GACCACAGTCATGGAGACGATTGGTCGGAAACTTCGGGATTCTCTGGGCCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR TCA 90 bp | ACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCCAAACGCGTTCTTGTCCAGCTaGGACAGGCTGAAGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: TPGWDSLRMVHPFVLSPNAFLSS*DRLKRF Trigger: GAATCTCTTCAGCCTGTCTCAGCTGGACAAGAACGC...GTTTGGAGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | CTCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCCTTTCTGCTCGATGTTaGCCAGGAAGAGCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFSSWVLSLAPTLGALCSLSARC*PGRAPW Trigger: CCAAGGAGCTCTTCCTGGGCAACATCGAGCAGAAAG...GGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | GCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCCTTTCAGCACTTCTGGGACCTGTATaGCAAAAAGTCCCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ARHWHSLSGDSYIRVLSALLGPV*QKVPGS Trigger: AGAGCCTGGGACTTTTTGGCATACAGGTCCCAGAAG...TGCTGAAAGGACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | CAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTGACCAATCGTCTCCATaGCTGTGGTCACATTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QLLGTFSSSYIGGPVFHLDQSSP*LWSHCH Trigger: GTGGCAATGTGACCACAGTCATGGAGACGATTGGTC...AAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTCTTTCTTCAACGATTTGGCTGGTACTTCCTTCCTTCCAGGAGATGGGCGAACGAGCAGCTCTaGAGGCTGGTGTGCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSFFLQRFGWYFLPSRRWANEQL*RLVCSG Trigger: CCCGCTGCACACCAGCCTGCAGAGCTGCTCGTTCGC...CCATCTCCTGGAAGGAAGGAAGTACCAGCCAAATCGTTGAAGAAAGAAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | AAGTTTCCGACCAATCGTCTCCATGACTGTGGTCACATTGCCACTTTTAAGCTCGAGCCCCCAAGGATCTaGAGAGCCTCGCTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: KFPTNRLHDCGHIATFKLEPPRI*RASLTH Trigger: GTGTGTGAGCGAGGCTCTGCAGATCCTTGGGGGCTC...GAGCTTAAAAGTGGCAATGTGACCACAGTCATGGAGACGATTGGTCGGAAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS-3UTR CCA 90 bp | GCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCCTTTCAGCAGGACCTCACATGTGTTaGAGCCTCGAATGCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: ARHWHSLSGDSYIRVLSAGPHMC*SLECLI Trigger: AATTAGGCATTCGAGGCTCCAACACATGTGAGGTCC...TGCTGAAAGGACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR CCA 90 bp | GCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCCTTTCAGCACCACACAGAACATGTTaGCCAACAGAACCTCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ARHWHSLSGDSYIRVLSAPHRTC*PTEPRD Trigger: ATCACGAGGTTCTGTTGGCCAACATGTTCTGTGTGG...TGCTGAAAGGACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | GGATGGACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTAGTCCACTTCTTCAGTaGAGAATTTTTCCAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: GWTPGWDSLRMVHPFVLSSPLLQ*RIFPAV Trigger: GACCGCTGGAAAAATTCTTCACTGAAGAAGTGGACT...AGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGTCCATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | CAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTCTAGCATCCCTGAAGTaGGGTAAGCCATACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLLGTFSSSYIGGPVFHLLASLK*GKPYSP Trigger: TGGAGAGTATGGCTTACCTCACTTCAGGGATGCTAG...AAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | CTCTTCAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCCCAGCTGAGACAGGCTaGAGAGATTCTGGAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: LFSSWVLSLAPTLGALCSPAETG*RDSGNK Trigger: CTTATTTCCAGAATCTCTTCAGCCTGTCTCAGCTGG...GGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR GCA 90 bp | GGATGGACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCGCTTCTCAAGGATCTaGCGAGACACTTTCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: GWTPGWDSLRMVHPFVLSRFSRI*RDTFLI Trigger: GATTAAGAAAGTGTCTCGGCAGATCCTTGAGAAGCG...AGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGTCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS-3UTR TCA 90 bp | AGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTAATGCCTTCTGAGCCATaGGCGCAAACTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWVLSLAPTLGALCSILMPSEP*AQTFPG Trigger: TCCAGGAAAAGTTTGCGCTCATGGCTCAGAAGGCAT...TAAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | AGTCCGGCCAAAGTAATGGACATTTTCCTCAAGCTTGTTGGCACTGTCGCCAAGACTCTCCATTACGTATaGCTTCTGAGCCATGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAKVMDIFLKLVGTVAKTLHYV*LLSHER Trigger: GCGCTCATGGCTCAGAAGGCATACGTAATGGAGAGT...CTTGGCGACAGTGCCAACAAGCTTGAGGAAAATGTCCATTACTTTGGCCGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
||
| CDS-3UTR TCA 90 bp | CAGCTCTTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTTCACTAAGTTCATGTTaGCTGACCTCTGGAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLGTFSSSYIGGPVFHLSLSSC*LTSGNG Trigger: CCCATTTCCAGAGGTCAGTCAACATGAACTTAGTGA...AAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAAGAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCACTGGCATAGCCTCTCAGGAGACAGCTATATCAGGGTCCTTTCAGCAAGTCTCTTTCTACTATaGATGCGGTCATTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARHWHSLSGDSYIRVLSASLFLL*MRSFCL Trigger: CAGACAAAATGACCGCATTCATAGTAGAAAGAGACT...TGCTGAAAGGACCCTGATATAGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| 3UTR CAA 72 bp | CATCTTATAGATGACTGTGAGCATCCACTTCTGTATTaGCCAGGCACTGGCATAGCCTCTCAGGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLIDDCEHPLLY*PGTGIASQETA Trigger: AGCTGTCTCCTGAGAGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATAAGATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR TCA 90 bp | CTCAAGAAGGGATTTTATTGTTATGGCCCCTCACGGTCATGGACTGAAGAACATCCAGTCCTCCATTGGTaGTCCAAACCTTGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKKGFYCYGPSRSWTEEHPVLHW*SKPWSH Trigger: ATGGCTCCAAGGTTTGGATCACCAATGGAGGACTGG...ATGTTCTTCAGTCCATGACCGTGAGGGGCCATAACAATAAAATCCCTTCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | CGACCAATCGTCTCCATGACTGTGGTCACATTGCCACTTTTAAGCTCTTTGATCATGCGTCCAGCATGCTaGAGGCCTCAAAGATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPIVSMTVVTLPLLSSLIMRPAC*RPQRLG Trigger: TCCTAATCTTTGAGGCCTGCAGCATGCTGGACGCAT...GATCAAAGAGCTTAAAAGTGGCAATGTGACCACAGTCATGGAGACGATTGGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCCAAACCTGGTATTTTCAAAATaGACCTCACATGTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGWDSLRMVHPFVLSPNLVFSK*TSHVLE Trigger: CTCCAACACATGTGAGGTCCATTTTGAAAATACCAG...GTTTGGAGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CCA 90 bp | CTCAAGAAGGGATTTTATTGTTATGGCCCCTCACGGTCATGGACTGAAGAACATTTTCCTCAAGCTTGTTaGCACTGTCGCCAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKGFYCYGPSRSWTEEHFPQAC*HCRQGW Trigger: CCAGCCTTGGCGACAGTGCCAACAAGCTTGAGGAAA...ATGTTCTTCAGTCCATGACCGTGAGGGGCCATAACAATAAAATCCCTTCTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCTAACAAAGGAAGTGGAGGAGCACTACAATTTGAAGTTTAAAACACTCGAGCCCCCAAGGATCTaGAGAGCCTCGCTCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ISLTKEVEEHYNLKFKTLEPPRI*RASLTH Trigger: GTGTGTGAGCGAGGCTCTGCAGATCCTTGGGGGCTC...GAGTGTTTTAAACTTCAAATTGTAGTGCTCCTCCACTTCCTTTGTTAGGCTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR TCA 90 bp | TTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTATAGATAGCGGTCCCACGAACTaGTTGATTTCACTAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTFSSSYIGGPVFHLIDSGPTN*LISLSS Trigger: TGAACTTAGTGAAATCAATCAGTTCGTGGGACCGCT...ATCTATAAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTCCTTCTTGATTTTCTTATGTAAAAAGGAATTTCTGACCACAGGCCAGGATAGCCTGGTGTGCTaGCAGGGTCACCGTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSSFLIFLCKKEFLTTGQDSLVC*QGHRDR Trigger: TCTATCACGGTGACCCTGGCAGCACACCAGGCTATC...CTGGCCTGTGGTCAGAAATTCCTTTTTACATAAGAAAATCAAGAAGGAAGACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCTAACAAAGGAAGTGGAGGAGCACTACAATTTGAAGTTTAAAACACTCCACCTTCACCATGGCTaGCTCGATAGAGCAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLTKEVEEHYNLKFKTLHLHHG*LDRAVG Trigger: CCCGACTGCTCTATCGAGGCAGCCATGGTGAAGGTG...GAGTGTTTTAAACTTCAAATTGTAGTGCTCCTCCACTTCCTTTGTTAGGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR TCA 90 bp | AACACTAAGCAAGAGAGGAAGTTAAAACAAACACTACAAAATCAACAGTGGCAAGTCCTTCATGTAGCCTaGGCCCCCAAGGATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTKQERKLKQTLQNQQWQVLHVA*APKDLQ Trigger: CTGCAGATCCTTGGGGGCTCAGGCTACATGAAGGAC...TTGCCACTGTTGATTTTGTAGTGTTTGTTTTAACTTCCTCTCTTGCTTAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CCA 90 bp | CTCAAGAAGGGATTTTATTGTTATGGCCCCTCACGGTCATGGACTGAAGAACATGGGATTTTTCCCTCCTaGTCAATTTTTCGAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGFYCYGPSRSWTEEHGIFPS*SIFRES Trigger: GGACTCTCGAAAAATTGACCAGGAGGGAAAAATCCC...ATGTTCTTCAGTCCATGACCGTGAGGGGCCATAACAATAAAATCCCTTCTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CCA 90 bp | ATAAGCCTAACAAAGGAAGTGGAGGAGCACTACAATTTGAAGTTTAAAACACTCGAGCATACATCGTGTTaGAGAGGCCCAGGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLTKEVEEHYNLKFKTLEHTSC*RGPGHH Trigger: ATGGTGGCCTGGGCCTCTCCAACACGATGTATGCTC...GAGTGTTTTAAACTTCAAATTGTAGTGCTCCTCCACTTCCTTTGTTAGGCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTCCTTCTTGATTTTCTTATGTAAAAAGGAATTTCTGACCACAGGCCAGACTCTCCATTACGTATaGCTTCTGAGCCATGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WSSFLIFLCKKEFLTTGQTLHYV*LLSHER Trigger: GCGCTCATGGCTCAGAAGGCATACGTAATGGAGAGT...CTGGCCTGTGGTCAGAAATTCCTTTTTACATAAGAAAATCAAGAAGGAAGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR TCA 90 bp | GTCCATCCTTTTGTCTTATCTCCAAACTTTGTCTCTGTAACTGCTTCTAGGAGTATTACGTATGCCTTCTaGGCCATGAGCGCAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHPFVLSPNFVSVTASRSITYAF*AMSANF Trigger: AAAGTTTGCGCTCATGGCTCAGAAGGCATACGTAAT...ACTCCTAGAAGCAGTTACAGAGACAAAGTTTGGAGATAAGACAAAAGGATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR GCA 90 bp | AACACTAAGCAAGAGAGGAAGTTAAAACAAACACTACAAAATCAACAGTGGCAAGACACTTTCTTAATCTaGTCATCCAGGTTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTKQERKLKQTLQNQQWQDTFLI*SSRFSG Trigger: TCCAGAAAACCTGGATGAGCAGATTAAGAAAGTGTC...TTGCCACTGTTGATTTTGTAGTGTTTGTTTTAACTTCCTCTCTTGCTTAGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| 3UTR CAA 72 bp | ACTTTATATACTTTGTTAAATGATTCCGTACGTAGATaGGAAACAGTCTCGGTGAGTGGTATAGACTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLYTLLNDSVRR*ETVSVSGIDST Trigger: AGTTGAGTCTATACCACTCACCGAGACTGTTTCCAATCTACGTACGGAATCATTTAACAAAGTATATAAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS TCA 90 bp | ACGAGCAGCTCTGCAGGCTGGTGTGCAGCGGGCGGCGCCTCGCCGTaGATTCCCTCAGCACCCGGGAAGCTCGCGCCGCAGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSAGWCAAGGASP*IPSAPGKLAPQPPP Trigger: CGGCGGCGGCTGCGGCGCGAGCTTCCCGGGTGCTGAGGGAATTCACGGCGAGGCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCTCGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS CCA 90 bp | ATGGGAAAACTCCTTTCTGCTCGATGTTGCCCAGGAAGAGCTCCTTaGCGAACGAGCAGCTCTGCAGGCTGGTGTGCAGCGGGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MGKLLSARCCPGRAP*RTSSSAGWCAAGGA Trigger: GGCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCTCGTTCGCCAAGGAGCTCTTCCTGGGCAACATCGAGCAGAAAGGAGTTTTCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 90 bp | ATTGCCGACCAAGATAATCCCCTTGAGGCCGATAGCCTGGTGTGCTaGCAGGGTCACCGTGATAGAGGCATCCAGGCTGATGATCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IADQDNPLEADSLVC*QGHRDRGIQADDLP Trigger: GGGGAGATCATCAGCCTGGATGCCTCTATCACGGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | CTATATCCTCCCCGTGGCCCCCTGCTTCCCTACCCATCCACTCCCACTTCTTGGTTGGCCAGTCCTCCATaGGTGATCCAAACCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYPPRGPLLPYPSTPTSWLASPP*VIQTLE Trigger: CTCCAAGGTTTGGATCACCAATGGAGGACTGGCCAA...CCAAGAAGTGGGAGTGGATGGGTAGGGAAGCAGGGGGCCACGGGGAGGATATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS GCA 90 bp | CTCATTGCCGACCAAGATAATCCCCTTGAGGCCGATAGCCTGGTGTaGTGCCAGGGTCACCGTGATAGAGGCATCCAGGCTGATGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LIADQDNPLEADSLV*CQGHRDRGIQADDL Trigger: GAGATCATCAGCCTGGATGCCTCTATCACGGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS GCA 90 bp | TGCTGCAGGCCTCAAAGATTAGGAGAATGCGGGCATCACGCAGCATaGGCTCATAGGGGTAGTCCTTCATGTAGCCTGAGCCCCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CCRPQRLGECGHHAA*AHRGSPSCSLSPQG Trigger: TCCTTGGGGGCTCAGGCTACATGAAGGACTACCCCTATGAGCGCATGCTGCGTGATGCCCGCATTCTCCTAATCTTTGAGGCCTGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
||
| CDS CCA 90 bp | TGTTCCTCATTGCCGACCAAGATAATCCCCTTGAGGCCGATAGCCTaGTGTGCTGCCAGGGTCACCGTGATAGAGGCATCCAGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CSSLPTKIIPLRPIA*CAARVTVIEASRLM Trigger: CATCAGCCTGGATGCCTCTATCACGGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | CTATATCCTCCCCGTGGCCCCCTGCTTCCCTACCCATCCACTCCCACTTCTTGGAAGTTGATGAGGATGTaGGCTACCCGCTTTAACACC | + |
|
Preference number: 5 (lower is better) Translates to: LYPPRGPLLPYPSTPTSWKLMRM*ATRFNT Trigger: GGTGTTAAAGCGGGTAGCCAACATCCTCATCAACTT...CCAAGAAGTGGGAGTGGATGGGTAGGGAAGCAGGGGGCCACGGGGAGGATATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | TTGGGTACTTTCTCTAGCTCCTACATTGGGGGCCCTGTGTTCCATCTTATAGATCGAGCATACATCGTGTaGGAGAGGCCCAGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LGTFSSSYIGGPVFHLIDRAYIV*ERPRPP Trigger: TGGTGGCCTGGGCCTCTCCAACACGATGTATGCTCG...ATCTATAAGATGGAACACAGGGCCCCCAATGTAGGAGCTAGAGAAAGTACCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS GCA 90 bp | TCGTGTTGGAGAGGCCCAGGCCACCATATTCTTCTGGGACCTGTATaGCAAAAAGTCCCAGGCTCTTCAACTTCTCTAAGGTGTCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SCWRGPGHHILLGPV*QKVPGSSTSLRCQL Trigger: CAGTTGACACCTTAGAGAAGTTGAAGAGCCTGGGACTTTTTGGCATACAGGTCCCAGAAGAATATGGTGGCCTGGGCCTCTCCAACACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 90 bp | CCACTTTTAAGCTCTTTGATCCTCGAGGTCAGGATGCGTCCAGCATaGTGCAGGCCTGTCAGGGCAATGAACAACCGAAGAATCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSSLILEVRMRPA*CRPVRAMNNRRISL Trigger: CAATGAGATTCTTCGGTTGTTCATTGCCCTGACAGGCCTGCAGCATGCTGGACGCATCCTGACCTCGAGGATCAAAGAGCTTAAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS GCA 90 bp | CTTTTAAGCTCTTTGATCCTCGAGGTCAGGATGCGTCCAGCATGCTaGAGGCCTGTCAGGGCAATGAACAACCGAAGAATCTCATTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSLILEVRMRPAC*RPVRAMNNRRISLV Trigger: AACCAATGAGATTCTTCGGTTGTTCATTGCCCTGACAGGCCTGCAGCATGCTGGACGCATCCTGACCTCGAGGATCAAAGAGCTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCGGGCCCATGTCCACTGAGATGTATCATGCAGCCACACACAGGAGCCAACACAGTAAAAATATaGGCCAGTCCTCCATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKAGPCPLRCIMQPHTGANTVKI*ASPPLV Trigger: CACCAATGGAGGACTGGCCAATATTTTTACTGTGTT...GGCTCCTGTGTGTGGCTGCATGATACATCTCAGTGGACATGGGCCCGCCTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS TCA 90 bp | GCTCATCCAGGTTTTCTGGAGCGTTCTTGTCCAGCTGAGACAGGCTaGAGAGATTCTGGAAATAAGCTTCCACACAGAACATGTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHPGFLERSCPAETG*RDSGNKLPHRTCWP Trigger: TGGCCAACATGTTCTGTGTGGAAGCTTATTTCCAGAATCTCTTCAGCCTGTCTCAGCTGGACAAGAACGCTCCAGAAAACCTGGATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | ACCCCTGGGTGGGACAGTCTCCGGATGGTCCATCCTTTTGTCTTATCTCCAAACAACCGAAGAATCTCATaGGTTCCCTCAAAGATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPGWDSLRMVHPFVLSPNNRRIS*VPSKIR Trigger: CCTAATCTTTGAGGGAACCAATGAGATTCTTCGGTT...GTTTGGAGATAAGACAAAAGGATGGACCATCCGGAGACTGTCCCACCCAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | GTCCATCCTTTTGTCTTATCTCCAAACTTTGTCTCTGTAACTGCTTCTAGGAGTTTCACTAAGTTCATGTaGACTGACCTCTGGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VHPFVLSPNFVSVTASRSFTKFM*TDLWKW Trigger: CCATTTCCAGAGGTCAGTCAACATGAACTTAGTGAA...ACTCCTAGAAGCAGTTACAGAGACAAAGTTTGGAGATAAGACAAAAGGATGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTTCTTTCTTCAACGATTTGGCTGGTACTTCCTTCCTTCCAGGAGATGGCAAACCTTGGAGCCATaGAGTATGAAGTACTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSFFLQRFGWYFLPSRRWQTLEP*SMKYFL Trigger: TAAGAAGTACTTCATACTCAATGGCTCCAAGGTTTG...CCATCTCCTGGAAGGAAGGAAGTACCAGCCAAATCGTTGAAGAAAGAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | GTCCATCCTTTTGTCTTATCTCCAAACTTTGTCTCTGTAACTGCTTCTAGGAGTATGACTGTGGTCACATaGCCACTTTTAAGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VHPFVLSPNFVSVTASRSMTVVT*PLLSSL Trigger: CAAAGAGCTTAAAAGTGGCAATGTGACCACAGTCAT...ACTCCTAGAAGCAGTTACAGAGACAAAGTTTGGAGATAAGACAAAAGGATGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS-3UTR CAA 90 bp | AACACTAAGCAAGAGAGGAAGTTAAAACAAACACTACAAAATCAACAGTGGCAAATGAATGCGGTCATTTaGTCTGTTTTCGAACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NTKQERKLKQTLQNQQWQMNAVI*SVFEPS Trigger: TGATGGTTCGAAAACAGACAAAATGACCGCATTCAT...TTGCCACTGTTGATTTTGTAGTGTTTGTTTTAACTTCCTCTCTTGCTTAGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
||
| CDS TCA 72 bp | TCTGCAGGCTGGTGTGCAGCGGGCGGCGCCTCGCCGTaGATTCCCTCAGCACCCGGGAAGCTCGCGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGWCAAGGASP*IPSAPGKLAPQ Trigger: CTGCGGCGCGAGCTTCCCGGGTGCTGAGGGAATTCACGGCGAGGCGCCGCCCGCTGCACACCAGCCTGCAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 72 bp | TTGCCCAGGAAGAGCTCCTTGGCGAACGAGCAGCTCTaGAGGCTGGTGTGCAGCGGGCGGCGCCTCGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRKSSLANEQL*RLVCSGRRLAV Trigger: CACGGCGAGGCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCTCGTTCGCCAAGGAGCTCTTCCTGGGCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 72 bp | AGCTCCTTGGCGAACGAGCAGCTCTGCAGGCTGGTGTaGAGCGGGCGGCGCCTCGCCGTGAATTCCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLANEQLCRLV*SGRRLAVNSLS Trigger: GCTGAGGGAATTCACGGCGAGGCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCTCGTTCGCCAAGGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS CAA 90 bp | AATGGGAAAACTCCTTTCTGCTCGATGTTGCCCAGGAAGAGCTCCTaGGCGAACGAGCAGCTCTGCAGGCTGGTGTGCAGCGGGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: NGKTPFCSMLPRKSS*ANEQLCRLVCSGRR Trigger: GCGCCGCCCGCTGCACACCAGCCTGCAGAGCTGCTCGTTCGCCAAGGAGCTCTTCCTGGGCAACATCGAGCAGAAAGGAGTTTTCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 72 bp | GAGCCCCCAAGGATCTGCAGAGCCTCGCTCACACACTaGCAGGCAGCCTCAGAGCTAAACACCTTCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: EPPRICRASLTH*QAASELNTFTM Trigger: CATGGTGAAGGTGTTTAGCTCTGAGGCTGCCTGGCAGTGTGTGAGCGAGGCTCTGCAGATCCTTGGGGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000197588.5 |
||
| CDS CAA 90 bp | GAGGCATCCAGGCTGATGATCTCCCCGAGCCGAGCATACATCGTGTaGGAGAGGCCCAGGCCACCATATTCTTCTGGGACCTGTATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EASRLMISPSRAYIV*ERPRPPYSSGTCMP Trigger: TGGCATACAGGTCCCAGAAGAATATGGTGGCCTGGGCCTCTCCAACACGATGTATGCTCGGCTCGGGGAGATCATCAGCCTGGATGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
||
| CDS GCA 72 bp | GACCAAGATAATCCCCTTGAGGCCGATAGCCTGGTGTaGTGCCAGGGTCACCGTGATAGAGGCATCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DQDNPLEADSLV*CQGHRDRGIQA Trigger: AGCCTGGATGCCTCTATCACGGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | GCCTTCTGTTCCTCATTGCCGACCAAGATAATCCCCTaGAGGCCGATAGCCTGGTGTGCTGCCAGGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: AFCSSLPTKIIP*RPIAWCAARVT Trigger: GGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAGGAACAGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS GCA 72 bp | CCAGGCAGCCTCAGAGCTAAACACCTTCACCATGGCTaGCTCGATAGAGCAGTCGGGAAATCCTGGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PGSLRAKHLHHG*LDRAVGKSWLV Trigger: GACCAACCAGGATTTCCCGACTGCTCTATCGAGGCAGCCATGGTGAAGGTGTTTAGCTCTGAGGCTGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000197588.5 |
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| CDS GCA 72 bp | CGTCCAGCATGCTGCAGGCCTCAAAGATTAGGAGAATaGGGGCATCACGCAGCATGCGCTCATAGGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RPACCRPQRLGE*GHHAACAHRGS Trigger: ACTACCCCTATGAGCGCATGCTGCGTGATGCCCGCATTCTCCTAATCTTTGAGGCCTGCAGCATGCTGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197588.5 |
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| CDS GCA 72 bp | AGCTCTTTGATCCTCGAGGTCAGGATGCGTCCAGCATaGTGCAGGCCTGTCAGGGCAATGAACAACCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSLILEVRMRPA*CRPVRAMNNRR Trigger: TCTTCGGTTGTTCATTGCCCTGACAGGCCTGCAGCATGCTGGACGCATCCTGACCTCGAGGATCAAAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | AGGCAGAAGGCTGCGATGTGTTCCCCAGACGACAGTTaGGGCAGATACTTGGCCTTCTGTTCCTCATTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RQKAAMCSPDDS*GRYLAFCSSLP Trigger: CGGCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAACTGTCGTCTGGGGAACACATCGCAGCCTTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | AGATACTTGGCCTTCTGTTCCTCATTGCCGACCAAGATAATCCCCTaGAGGCCGATAGCCTGGTGTGCTGCCAGGGTCACCGTGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: RYLAFCSSLPTKIIP*RPIAWCAARVTVIE Trigger: CTCTATCACGGTGACCCTGGCAGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAGGAACAGAAGGCCAAGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | TCCCCAGACGACAGTTTGGGCAGATACTTGGCCTTCTGTTCCTCATaGCCGACCAAGATAATCCCCTTGAGGCCGATAGCCTGGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SPDDSLGRYLAFCSS*PTKIIPLRPIAWCA Trigger: AGCACACCAGGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAACTGTCGTCTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS GCA 72 bp | CCTCTGGAAATGGGAAAACTCCTTTCTGCTCGATGTTaGCCAGGAAGAGCTCCTTGGCGAACGAGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLEMGKLLSARC*PGRAPWRTSSS Trigger: AGAGCTGCTCGTTCGCCAAGGAGCTCTTCCTGGGCAACATCGAGCAGAAAGGAGTTTTCCCATTTCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
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| CDS CAA 90 bp | GGCTCTGTTAGGCAGAAGGCTGCGATGTGTTCCCCAGACGACAGTTaGGGCAGATACTTGGCCTTCTGTTCCTCATTGCCGACCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: GSVRQKAAMCSPDDS*GRYLAFCSSLPTKI Trigger: TATCTTGGTCGGCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAACTGTCGTCTGGGGAACACATCGCAGCCTTCTGCCTAACAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS TCA 72 bp | GGATGCGTCCAGCATGCTGCAGGCCTGTCAGGGCAATaGACAACCGAAGAATCTCATTGGTTCCCTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GCVQHAAGLSGQ*TTEESHWFPQR Trigger: TCTTTGAGGGAACCAATGAGATTCTTCGGTTGTTCATTGCCCTGACAGGCCTGCAGCATGCTGGACGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | GACAGTTTGGGCAGATACTTGGCCTTCTGTTCCTCATaGCCGACCAAGATAATCCCCTTGAGGCCGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: DSLGRYLAFCSS*PTKIIPLRPIA Trigger: GGCTATCGGCCTCAAGGGGATTATCTTGGTCGGCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | GCGATGTGTTCCCCAGACGACAGTTTGGGCAGATACTaGGCCTTCTGTTCCTCATTGCCGACCAAGATAATC | + |
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Preference number: 6 (lower is better) Translates to: AMCSPDDSLGRY*AFCSSLPTKII Trigger: GATTATCTTGGTCGGCAATGAGGAACAGAAGGCCAAGTATCTGCCCAAACTGTCGTCTGGGGAACACATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | GAATCCCGAAGTTTCCGACCAATCGTCTCCATGACTGTGGTCACATaGCCACTTTTAAGCTCTTTGATCCTCGAGGTCAGGATGCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ESRSFRPIVSMTVVT*PLLSSLILEVRMRP Trigger: TGGACGCATCCTGACCTCGAGGATCAAAGAGCTTAAAAGTGGCAATGTGACCACAGTCATGGAGACGATTGGTCGGAAACTTCGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS GCA 72 bp | GAAGAATCTCATTGGTTCCCTCAAAGATTAGGAGAATaGGGGCATCACGCAGCATGCGCTCATAGGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: EESHWFPQRLGE*GHHAACAHRGS Trigger: ACTACCCCTATGAGCGCATGCTGCGTGATGCCCGCATTCTCCTAATCTTTGAGGGAACCAATGAGATTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS GCA 72 bp | CGCTTCTCAAGGATCTGCCGAGACACTTTCTTAATCTaGTCATCCAGGTTTTCTGGAGCGTTCTTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RFSRICRDTFLI*SSRFSGAFLSS Trigger: GCTGGACAAGAACGCTCCAGAAAACCTGGATGAGCAGATTAAGAAAGTGTCTCGGCAGATCCTTGAGAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS TCA 72 bp | AGTCGGGAAATCCTGGTTGGTCTAGCATCCCTGAAGTaGGGTAAGCCATACTCTCCATTACGTATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SREILVGLASLK*GKPYSPLRMPS Trigger: AGAAGGCATACGTAATGGAGAGTATGGCTTACCTCACTTCAGGGATGCTAGACCAACCAGGATTTCCCGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000197588.5 |
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| CDS CAA 72 bp | AGGCCTGTCAGGGCAATGAACAACCGAAGAATCTCATaGGTTCCCTCAAAGATTAGGAGAATGCGGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: RPVRAMNNRRIS*VPSKIRRMRAS Trigger: TGATGCCCGCATTCTCCTAATCTTTGAGGGAACCAATGAGATTCTTCGGTTGTTCATTGCCCTGACAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | AGCACAGCAGTCATGCCATACAAGTTGATGAGGATGTaGGCTACCCGCTTTAACACCAGCTGTTCCTCTACA | + |
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Preference number: 6 (lower is better) Translates to: STAVMPYKLMRM*ATRFNTSCSST Trigger: TGTAGAGGAACAGCTGGTGTTAAAGCGGGTAGCCAACATCCTCATCAACTTGTATGGCATGACTGCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | GCTCTCGACAGCACAGCAGTCATGCCATACAAGTTGATGAGGATGTaGGCTACCCGCTTTAACACCAGCTGTTCCTCTACAATGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALDSTAVMPYKLMRM*ATRFNTSCSSTMFF Trigger: AAAGAACATTGTAGAGGAACAGCTGGTGTTAAAGCGGGTAGCCAACATCCTCATCAACTTGTATGGCATGACTGCTGTGCTGTCGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS TCA 72 bp | GGTTTTCTGGAGCGTTCTTGTCCAGCTGAGACAGGCTaGAGAGATTCTGGAAATAAGCTTCCACACAGAACA | + |
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Preference number: 6 (lower is better) Translates to: GFLERSCPAETG*RDSGNKLPHRT Trigger: TGTTCTGTGTGGAAGCTTATTTCCAGAATCTCTTCAGCCTGTCTCAGCTGGACAAGAACGCTCCAGAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | CCGCCGAAGTCTCTTTCTACTATGAATGCGGTCATTTaGTCTGTTTTCGAACCATCAGAATCGACCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: PPKSLSTMNAVI*SVFEPSESTTS Trigger: CGAGGTGGTCGATTCTGATGGTTCGAAAACAGACAAAATGACCGCATTCATAGTAGAAAGAGACTTCGGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | CCATCAGAATCGACCACCTCGGTTTTTGCAAACACAGTAAAAATATaGGCCAGTCCTCCATTGGTGATCCAAACCTTGGAGCCATTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PSESTTSVFANTVKI*ASPPLVIQTLEPLS Trigger: ACTCAATGGCTCCAAGGTTTGGATCACCAATGGAGGACTGGCCAATATTTTTACTGTGTTTGCAAAAACCGAGGTGGTCGATTCTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | TCGACCACCTCGGTTTTTGCAAACACAGTAAAAATATaGGCCAGTCCTCCATTGGTGATCCAAACCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: STTSVFANTVKI*ASPPLVIQTLE Trigger: CTCCAAGGTTTGGATCACCAATGGAGGACTGGCCAATATTTTTACTGTGTTTGCAAAAACCGAGGTGGTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 90 bp | TTTTTCCAGCGGTCCCACGAACTGATTGATTTCACTAAGTTCATGTaGACTGACCTCTGGAAATGGGAAAACTCCTTTCTGCTCGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FFQRSHELIDFTKFM*TDLWKWENSFLLDV Trigger: AACATCGAGCAGAAAGGAGTTTTCCCATTTCCAGAGGTCAGTCAACATGAACTTAGTGAAATCAATCAGTTCGTGGGACCGCTGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011492.15 ENSMUST00000196648.2 |
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| CDS CAA 90 bp | TTAGTGATTCCGCCGAAGTCTCTTTCTACTATGAATGCGGTCATTTaGTCTGTTTTCGAACCATCAGAATCGACCACCTCGGTTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LVIPPKSLSTMNAVI*SVFEPSESTTSVFA Trigger: TGCAAAAACCGAGGTGGTCGATTCTGATGGTTCGAAAACAGACAAAATGACCGCATTCATAGTAGAAAGAGACTTCGGCGGAATCACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CCA 72 bp | GCACTCTGGTATTTTCAAAATGGACCTCACATGTGTTaGAGCCTCGAATGCCTAATTTATCTTCAGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALWYFQNGPHMC*SLECLIYLQVS Trigger: GGAAACCTGAAGATAAATTAGGCATTCGAGGCTCCAACACATGTGAGGTCCATTTTGAAAATACCAGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | GGCACTCTGGTATTTTCAAAATGGACCTCACATGTGTaGGAGCCTCGAATGCCTAATTTATCTTCAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GTLVFSKWTSHV*EPRMPNLSSGF Trigger: GAAACCTGAAGATAAATTAGGCATTCGAGGCTCCAACACATGTGAGGTCCATTTTGAAAATACCAGAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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| CDS CAA 72 bp | TTTGCAAACACAGTAAAAATATTGGCCAGTCCTCCATaGGTGATCCAAACCTTGGAGCCATTGAGTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: FANTVKILASPP*VIQTLEPLSMK Trigger: CTTCATACTCAATGGCTCCAAGGTTTGGATCACCAATGGAGGACTGGCCAATATTTTTACTGTGTTTGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011492.15 |
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