Pregenerated sensors for ABCG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029802Ensembl transcript IDs: ENSMUST00000031822.13, ENSMUST00000114294.8, ENSMUST00000143752.8, ENSMUST00000145161.8, ENSMUST00000145685.2, ENSMUST00000203146.3, ENSMUST00000204948.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACTTAGGGAAATCCAGATGGAGCTAACCTGGAAGCCTTGTGCGTaGGGACTGACTTTTATTGTATCTCAAAGTATTGCCAAGAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: GLREIQMELTWKPCA*GLTFIVSQSIAKRV Trigger: TACTCTCTTGGCAATACTTTGAGATACAATAAAAGTCAGTCCTCACGCACAAGGCTTCCAGGTTAGCTCCATCTGGATTTCCCTAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR CCA 90 bp | TACAATCCAACCACTATATCAAATGATAAAGAGAACACTGGAAAATaGAGGGCAGAAAGACTGTTAGAGACAGAGAACCATGACATCTGC | + |
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Preference number: 1 (lower is better) Translates to: YNPTTISNDKENTGK*RAERLLETENHDIC Trigger: GCAGATGTCATGGTTCTCTGTCTCTAACAGTCTTTCTGCCCTCCATTTTCCAGTGTTCTCTTTATCATTTGATATAGTGGTTGGATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGCCTACAATCTGCTTCTaGCTCCTAAGTGCCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: TGSKQASTYNLLLPPKCQPTICF*LLSART Trigger: AGTCCTGGCACTTAGGAGGCAGAAGCAGATTGTAGG...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| 3UTR CAA 90 bp | GAGCATGTATGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTaGGCAATAGCCACACTGAAGGGTGTCCAAGTGCCGGTGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: EHVCVQEHKAELPSA*AIATLKGVQVPVQN Trigger: GTTCTGCACCGGCACTTGGACACCCTTCAGTGTGGCTATTGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACATACATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR TCA 90 bp | TATGAGCATGTATGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTTGGCAAGCCATGCAGACAGATaGGGTGTAGCTGAGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: YEHVCVQEHKAELPSALASHADR*GVAERG Trigger: GCCCCTCTCAGCTACACCTCATCTGTCTGCATGGCT...TGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACATACATGCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGTCCAAGTGCCGGTGCAGAACAAGCCATGCAGACAGATGAGGTGTAGCTATAATTTCACTGGCTaGAAACGACTGGGAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: KGVQVPVQNKPCRQMRCSYNFTG*KRLGIC Trigger: GCAAATTCCCAGTCGTTTCCAGCCAGTGAAATTATA...GCTACACCTCATCTGTCTGCATGGCTTGTTCTGCACCGGCACTTGGACACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTACCTCGACCTACAATCTaGTTCTGCCTCCTAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PAVGKVMNSKGEFTIATLPRPTI*FCLLSA Trigger: GGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGG...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGGTGCCCATATTTAATTaGAGTACAATTAATAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: TGSKQASTYNLLLPPKCQVPIFN*STINSP Trigger: CGGACTATTAATTGTACTCCAATTAAATATGGGCAC...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTAACGGCTGTTAGGAGATaGAGGATCAGCCTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PAVGKVMNSKGEFTIATLTAVRR*RISLLQ Trigger: CTGGAGAAGGCTGATCCTCCATCTCCTAACAGCCGT...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | TATGAGCATGTATGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTTGGCAGGCATGAGGAACTCTTaGATGTTGTGTTCCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: YEHVCVQEHKAELPSALAGMRNS*MLCSIS Trigger: GGAAATGGAACACAACATGCAAGAGTTCCTCATGCC...TGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACATACATGCTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACCGTTACATTGAATCCTaGACAAAACTCTTGTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: STVPKVTVRCPDLSSTRYRYIES*TKLLSQ Trigger: TTGGGACAAGAGTTTTGTCCAGGATTCAATGTAACG...GTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTACAGCCTTCTCCAGGGTaGATGTATATGCATTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PAVGKVMNSKGEFTIATLQPSPG*MYMHLS Trigger: GCTCAAATGCATATACATTCACCCTGGAGAAGGCTG...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTAAGCAGCAACAGTAGCTaGACAGGGGTCTTCAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: PAVGKVMNSKGEFTIATLSSNSS*TGVFSL Trigger: TAAACTGAAGACCCCTGTGCAGCTACTGTTGCTGCT...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTAACGGTAGATTTCTTTaGAGTGTAGATGCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: GGEGHGRNDKNTVVMNGINGRFL*SVDAGP Trigger: AGGTCCTGCATCTACACTGCAAAGAAATCTACCGTT...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CCA 90 bp | ACATCCGTATTTATTGTTGCCCTATTTATGATGGCAAGGAAATTAAGCCAGTCTAGACAGCATGCACTTTaGACCCAGGACTTAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TSVFIVALFMMARKLSQSRQHAL*TQDLGK Trigger: TTTCCCTAAGTCCTGGGTCCAAAGTGCATGCTGTCT...AGACTGGCTTAATTTCCTTGCCATCATAAATAGGGCAACAATAAATACGGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTCAGATTTTATATCCCTaGGCTATGCCAAAGATGTTA | + |
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Preference number: 2 (lower is better) Translates to: GGEGHGRNDKNTVVMNGIQILYP*AMPKML Trigger: TAACATCTTTGGCATAGCTCAGGGATATAAAATCTG...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTTGTTTTAAAATGAAATaGGAAGCAAGGACGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: GGEGHGRNDKNTVVMNGICFKMK*EARTRV Trigger: AACTCTCGTCCTTGCTTCGCATTTCATTTTAAAACA...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR CAA 90 bp | TTATTAAACCAGGGTAAATTCCAGTTGCATTGTAAACATCTATCATaGTATCTAGAGATACGGGAAGCTCTCACACCTTGTAAAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLNQGKFQLHCKHLS*YLEIREALTPCKRS Trigger: GCTTCTTTTACAAGGTGTGAGAGCTTCCCGTATCTCTAGATACAATGATAGATGTTTACAATGCAACTGGAATTTACCCTGGTTTAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR CAA 90 bp | GGAGAATTCACTATTGCCACATTATTAAACCAGGGTAAATTCCAGTaGCATTGTAAACATCTATCATTGTATCTAGAGATACGGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GEFTIATLLNQGKFQ*HCKHLSLYLEIREA Trigger: AGCTTCCCGTATCTCTAGATACAATGATAGATGTTTACAATGCAACTGGAATTTACCCTGGTTTAATAATGTGGCAATAGTGAATTCTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR TCA 90 bp | ACATCCGTATTTATTGTTGCCCTATTTATGATGGCAAGGAAATTAAGCCAGTCTGATGAGTTCAGTATGTaGCAGATAATGTCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: TSVFIVALFMMARKLSQSDEFSM*QIMSLV Trigger: AACTAAGGACATTATCTGTCACATACTGAACTCATC...AGACTGGCTTAATTTCCTTGCCATCATAAATAGGGCAACAATAAATACGGATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR TCA 90 bp | AAACAACAATTTCAGGTAGGCAATTGTGAGGAAGATAATAATCATACAAGCCAGTGTTGTCCGTTACATTaGATCCTGGACAAAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: KQQFQVGNCEEDNNHTSQCCPLH*ILDKTL Trigger: AAGAGTTTTGTCCAGGATTCAATGTAACGGACAACA...CTGGCTTGTATGATTATTATCTTCCTCACAATTGCCTACCTGAAATTGTTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCCGTATTTATTGTTGCCCTATTTATGATGGCAAGGAAATTAAGCCAGTCTCACAACTTGTCAAAATaGAGAGAACAACTGTCGATT | + |
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Preference number: 2 (lower is better) Translates to: TSVFIVALFMMARKLSQSHNLSK*REQLSI Trigger: AATCGACAGTTGTTCTCTCCATTTTGACAAGTTGTG...AGACTGGCTTAATTTCCTTGCCATCATAAATAGGGCAACAATAAATACGGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR TCA 90 bp | AAACAACAATTTCAGGTAGGCAATTGTGAGGAAGATAATAATCATACAAGCCAGGATGAGTTCAGTATGTaGCAGATAATGTCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: KQQFQVGNCEEDNNHTSQDEFSM*QIMSLV Trigger: AACTAAGGACATTATCTGTCACATACTGAACTCATC...CTGGCTTGTATGATTATTATCTTCCTCACAATTGCCTACCTGAAATTGTTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
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| 3UTR GCA 72 bp | CAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTaGCTCCTAAGTGCCAGGACTACTAGGGATGCCATC | + |
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Preference number: 3 (lower is better) Translates to: QGPNKPRPTICF*LLSARTTRDAI Trigger: GATGGCATCCCTAGTAGTCCTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| 3UTR TCA 72 bp | GTGCAGAACAAGCCATGCAGACAGATGAGGTGTAGCTaGGAGGGGCATGAGGAACTCTTGCATGTTGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: VQNKPCRQMRCS*EGHEELLHVVF Trigger: GAACACAACATGCAAGAGTTCCTCATGCCCCTCTCAGCTACACCTCATCTGTCTGCATGGCTTGTTCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR GCA 72 bp | TTAATACAGGGTCCAAACAAGCCTCGACCTACAATCTaGTTCTGCCTCCTAAGTGCCAGGACTACTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LIQGPNKPRPTI*FCLLSARTTRD Trigger: ATCCCTAGTAGTCCTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGTATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| 3UTR TCA 72 bp | CAGTGTCCTCTATATATGACAGGGAAGCTGCACACTTaGGATCTCAACAATATGGTTGCCTCAGTAAGACCT | + |
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Preference number: 3 (lower is better) Translates to: QCPLYMTGKLHT*DLNNMVASVRP Trigger: AGGTCTTACTGAGGCAACCATATTGTTGAGATCTCAAGTGTGCAGCTTCCCTGTCATATATAGAGGACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR TCA 72 bp | GAAATCCAGATGGAGCTAACCTGGAAGCCTTGTGCGTaGGGACTGACTTTTATTGTATCTCAAAGTATTGCC | + |
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Preference number: 3 (lower is better) Translates to: EIQMELTWKPCA*GLTFIVSQSIA Trigger: GGCAATACTTTGAGATACAATAAAAGTCAGTCCTCACGCACAAGGCTTCCAGGTTAGCTCCATCTGGATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR TCA 72 bp | TTCTTCCACAGTCCCCAAGGTGACAGTTCGATGCCCTaGTTTATCAAGTACTCGTTACCAGTACATATTGCA | + |
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Preference number: 3 (lower is better) Translates to: FFHSPQGDSSMP*FIKYSLPVHIA Trigger: TGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
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| 3UTR TCA 72 bp | AGCAACAGTAGCTGCACAGGGGTCTTCAGTTTACAGTaGTTCCTTGAACTCTACCTTATCTTGTCTTTTACC | + |
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Preference number: 3 (lower is better) Translates to: SNSSCTGVFSLQ*FLELYLILSFT Trigger: GGTAAAAGACAAGATAAGGTAGAGTTCAAGGAATCACTGTAAACTGAAGACCCCTGTGCAGCTACTGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR GCA 72 bp | GCAGAAAGACTGTTAGAGACAGAGAACCATGACATCTaGTATGAGACAGTGTCCTCTATATATGACAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: AERLLETENHDI*YETVSSIYDRE Trigger: TTCCCTGTCATATATAGAGGACACTGTCTCATAGCAGATGTCATGGTTCTCTGTCTCTAACAGTCTTTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTAAGGGAAGCTGCACACTaGAGATCTCAACAATATGGT | + |
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Preference number: 3 (lower is better) Translates to: PAVGKVMNSKGEFTIATLREAAH*RSQQYG Trigger: ACCATATTGTTGAGATCTCAAGTGTGCAGCTTCCCT...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR TCA 72 bp | GGGGAAAGAACAACCCTCATTCACTGTTGGTGGGAGTaGAAATTAACCCAGCCATTATACAAATTAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GERTTLIHCWWE*KLTQPLYKLVW Trigger: CCAAACTAATTTGTATAATGGCTGGGTTAATTTTCACTCCCACCAACAGTGAATGAGGGTTGTTCTTTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR-3UTR CAA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTTCCTGGACAAAACTCTaGTCCCAAGAATTCATTATA | + |
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Preference number: 3 (lower is better) Translates to: LFKYHSPLPYLITLITDISWTKL*SQEFII Trigger: TATAATGAATTCTTGGGACAAGAGTTTTGTCCAGGA...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
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| 3UTR TCA 72 bp | TTCTCAAAAGACTCTGATACTCAGATTTTATATCCCTaGGCTATGCCAAAGATGTTAAGGGACCGTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: FSKDSDTQILYP*AMPKMLRDRSG Trigger: TCCTGAACGGTCCCTTAACATCTTTGGCATAGCTCAGGGATATAAAATCTGAGTATCAGAGTCTTTTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR TCA 72 bp | AGGGGGACAAACATGTCCATACATCAAAACACTTACTaGACTGTAGTGTATAATTTCACTGGCTGGAAACGA | + |
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Preference number: 3 (lower is better) Translates to: RGTNMSIHQNTY*TVVYNFTGWKR Trigger: TCGTTTCCAGCCAGTGAAATTATACACTACAGTTCAGTAAGTGTTTTGATGTATGGACATGTTTGTCCCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| 3UTR GCA 72 bp | ACAAAAGAACTCCATTGGTACATCCGTATTTATTGTTaGCCTATTTATGATGGCAAGGAAATTAAGCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: TKELHWYIRIYC*PIYDGKEIKPV Trigger: GACTGGCTTAATTTCCTTGCCATCATAAATAGGGCAACAATAAATACGGATGTACCAATGGAGTTCTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGACAGTGGTAACCTGCTaGTGCAAAGTACTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQTVVTC*CKVLQG Trigger: GCCTTGGAGTACTTTGCATCAGCAGGTTACCACTGT...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGAACCTGAACAGCATTTaGAATGGGCAGGTTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQNLNSI*NGQVEV Trigger: CACCTCAACCTGCCCATTTCAAATGCTGTTCAGGTT...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| 3UTR CAA 72 bp | TGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTaGGCAATAGCCACACTGAAGGGTGTCCAAGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: CVQEHKAELPSA*AIATLKGVQVP Trigger: CGGCACTTGGACACCCTTCAGTGTGGCTATTGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR TCA 90 bp | TCCACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACAAGGCCCAATGGTTCTaGGATTCACCAAGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: STVPKVTVRCPDLSSTRYKAQWF*DSPRGQ Trigger: CTGGCCTCTTGGTGAATCTCAGAACCATTGGGCCTT...GTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
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| CDS-3UTR CCA 90 bp | ACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACCAGTTCTGTGCTGGCCCATaGAACACGAGTTTCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: TVPKVTVRCPDLSSTRYQFCAGP*NTSFPE Trigger: TTCCGGGAAACTCGTGTTCCATGGGCCAGCACAGAA...CTGGTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGTTGAACCACATAACCTaGACAGCATTTGAAATGGGC | + |
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Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQLNHIT*TAFEMG Trigger: GCCCATTTCAAATGCTGTTCAGGTTATGTGGTTCAA...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGCAAAAGCGATTGTCATaGGAAGTGTTGCTACAGACA | + |
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Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQQKRLS*EVLLQT Trigger: TGTCTGTAGCAACACTTCTCATGACAATCGCTTTTG...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGTGTCATGAGAAGTGTTaGTACAGACACCACACTTTG | + |
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Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQCHEKC*YRHHTL Trigger: CAAAGTGTGGTGTCTGTAGCAACACTTCTCATGACA...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTCCACACTTTGGCCTGTaGCTATGGCCAGTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GGEGHGRNDKNTVVMNGIPHFGL*LWPVPW Trigger: CCATGGCACTGGCCATAGCCACAGGCCAAAGTGTGG...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR TCA 90 bp | TATGAGCATGTATGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTTGGCAAAGGCCCAATGGTTCTaGGATTCACCAAGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YEHVCVQEHKAELPSALAKAQWF*DSPRGQ Trigger: CTGGCCTCTTGGTGAATCTCAGAACCATTGGGCCTT...TGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACATACATGCTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | TTAATACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTCTGGCTTCTCTCCCTTaGAAGGCTCTTCAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQGPNKPRPTICFCLLSLASLP*KALQSC Trigger: ACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAG...ACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGTATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGACACTGGAAAAACACTaGTTGGTAGTCAGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGSKQASTYNLLLPPKCQTLEKH*LVVRKN Trigger: GTTTTTCCTGACTACCAACCAGTGTTTTTCCAGTGT...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTGGAATGCTAAAGTACTaGAGCCAGGACAGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGHGRNDKNTVVMNGIGMLKY*SQDSQG Trigger: GCCTTGGCTGTCCTGGCTTCAGTACTTTAGCATTCC...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR GCA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACCTAGCAACGAAGACTTaGCTCCGCCTGTGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDLATKT*LRLWVP Trigger: TGGGACCCACAGGCGGAGGCAAGTCTTCGTTGCTAG...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACCAGTACATACTGGCTTCTCTCCCTTaGAAGGCTCTTCAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKVTVRCPDLSSTRYQYILASLP*KALQSC Trigger: ACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAG...TATGTACTGGTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTCTATGGCCAGTGCCATaGAACTGGCCGTATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGEGHGRNDKNTVVMNGILWPVP*NWPYKP Trigger: TGGCTTATACGGCCAGTTCCATGGCACTGGCCATAG...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | GATGCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACCCACACTTTGGCCTGTaGCTATGGCCAGTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DALIYQVLVTSTYCIAVNPHFGL*LWPVPW Trigger: CCATGGCACTGGCCATAGCCACAGGCCAAAGTGTGG...GTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| 3UTR CAA 72 bp | AAATCTAAGACCCTACTGCTGAAGACAGCATGCACTTaGGACCCAGGACTTAGGGAAATCCAGATGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSKTLLLKTACT*DPGLREIQMEL Trigger: TAGCTCCATCTGGATTTCCCTAAGTCCTGGGTCCAAAGTGCATGCTGTCTTCAGCAGTAGGGTCTTAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTTGGTAAGGTCATGAACTCTAAAGGAGAATTCACTATTGCCACATTATTCTGTGCTGGCCCATaGAACACGAGTTTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAVGKVMNSKGEFTIATLFCAGP*NTSFPE Trigger: TTCCGGGAAACTCGTGTTCCATGGGCCAGCACAGAA...TAATGTGGCAATAGTGAATTCTCCTTTAGAGTTCATGACCTTACCAACAGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTCCAGTGCCATGGAACTaGCCGTATAAGCCACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKYHSPLPYLITLITDIPVPWN*PYKPPL Trigger: TAATGGTGGCTTATACGGCCAGTTCCATGGCACTGG...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTAACCTGAACAGCATTTaGAATGGGCAGGTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFKYHSPLPYLITLITDINLNSI*NGQVEV Trigger: CACCTCAACCTGCCCATTTCAAATGCTGTTCAGGTT...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTCCCCAACCAGAAAGATAATACATTTTACAATAGGTTCCAGACTTCTACAAGCCAGGGCCACATaGTTCTTCCACAGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKSPTRKIIHFTIGSRLLQARAT*FFHSPQ Trigger: TTGGGGACTGTGGAAGAATCATGTGGCCCTGGCTTG...TAGAAGTCTGGAACCTATTGTAAAATGTATTATCTTTCTGGTTGGGGACTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCTTTGGCCTGTGGCTATaGCCAGTGCCATGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPFGLWL*PVPWNW Trigger: CCAGTTCCATGGCACTGGCCATAGCCACAGGCCAAA...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | TTAATACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTCTTTCACTCGATAGGTaGTGTGATGAAAACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LIQGPNKPRPTICFCLLSLSLDR*CDENST Trigger: TGTTGAGTTTTCATCACATCACCTATCGAGTGAAAG...ACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAACAGTGGTAACCTGCTaGTGCAAAGTACTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALIYQVLVTSTYCIAVNTTVVTC*CKVLQG Trigger: GCCTTGGAGTACTTTGCATCAGCAGGTTACCACTGT...TGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCATGTATGTGTACAAGAACATAAAGCTGAGCTCCCGAGTGCTTTGGCAAGTGAATATAACACTTaGCAAGAACCTCATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YEHVCVQEHKAELPSALASEYNT*QEPHGE Trigger: CTCCCCATGAGGTTCTTGCCAAGTGTTATATTCACT...TGCCAAAGCACTCGGGAGCTCAGCTTTATGTTCTTGTACACATACATGCTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCCTATGGCCAGTGCCATaGAACTGGCCGTATAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPLWPVP*NWPYKP Trigger: TGGCTTATACGGCCAGTTCCATGGCACTGGCCATAG...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAAGTGCTTTTGGCCTGTGGCTATaGCCAGTGCCATGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYQVLVTSTYCIAVNTSAFGLWL*PVPWNW Trigger: CCAGTTCCATGGCACTGGCCATAGCCACAGGCCAAA...AGCACTTGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | TTAATACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTCGTTACATTGAATCCTaGACAAAACTCTTGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIQGPNKPRPTICFCLLSRYIES*TKLLSQ Trigger: TTGGGACAAGAGTTTTGTCCAGGATTCAATGTAACG...ACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR TCA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCGAACAGCTCCACAGCTaGCACACTGGAAAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPEQLHS*HTGKTL Trigger: CAGTGTTTTTCCAGTGTGTCAGCTGTGGAGCTGTTC...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTCTTTCACTCGATAGGTaGTGTGATGAAAACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LFKYHSPLPYLITLITDILSLDR*CDENST Trigger: TGTTGAGTTTTCATCACATCACCTATCGAGTGAAAG...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACAATTTCAGGTAGGCAATTGTGAGGAAGATAATAATCATACAAGCCAGGAACAGCTCCACAGCTaGCACACTGGAAAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KQQFQVGNCEEDNNHTSQEQLHS*HTGKTL Trigger: CAGTGTTTTTCCAGTGTGTCAGCTGTGGAGCTGTTC...CTGGCTTGTATGATTATTATCTTCCTCACAATTGCCTACCTGAAATTGTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR TCA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTTGTTGTCCGTTACATTaGATCCTGGACAAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFKYHSPLPYLITLITDICCPLH*ILDKTL Trigger: AAGAGTTTTGTCCAGGATTCAATGTAACGGACAACA...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTCTCTTCAGTCTTGTTTaGTTCATTGTCTTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGEGHGRNDKNTVVMNGILFSLV*FIVLFL Trigger: GAGGAACAAGACAATGAAGCAAACAAGACTGAAGAG...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CCA 90 bp | AAACAACAATTTCAGGTAGGCAATTGTGAGGAAGATAATAATCATACAAGCCAGCTGGCTTCTCTCCCTTaGAAGGCTCTTCAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQFQVGNCEEDNNHTSQLASLP*KALQSC Trigger: ACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAG...CTGGCTTGTATGATTATTATCTTCCTCACAATTGCCTACCTGAAATTGTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
||
| CDS-3UTR GCA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACTGTCATGAGAAGTGTTaGTACAGACACCACACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDCHEKC*YRHHTL Trigger: CAAAGTGTGGTGTCTGTAGCAACACTTCTCATGACA...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAAGTGAATATAACACTTaGCAAGAACCTCATGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALIYQVLVTSTYCIAVNTSEYNT*QEPHGE Trigger: CTCCCCATGAGGTTCTTGCCAAGTGTTATATTCACT...TGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| 3UTR CAA 72 bp | CAGGGTAAATTCCAGTTGCATTGTAAACATCTATCATaGTATCTAGAGATACGGGAAGCTCTCACACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGKFQLHCKHLS*YLEIREALTPC Trigger: ACAAGGTGTGAGAGCTTCCCGTATCTCTAGATACAATGATAGATGTTTACAATGCAACTGGAATTTACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| 3UTR CAA 72 bp | GCTGTTGTCCGTTACATTGAATCCTGGACAAAACTCTaGTCCCAAGAATTCATTATACTGCAAAGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVVRYIESWTKL*SQEFIILQSCE Trigger: TTCACAGCTTTGCAGTATAATGAATTCTTGGGACAAGAGTTTTGTCCAGGATTCAATGTAACGGACAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAAGTCTCTTCAGTCTTGTTTaGTTCATTGTCTTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIYQVLVTSTYCIAVNTSLFSLV*FIVLFL Trigger: GAGGAACAAGACAATGAAGCAAACAAGACTGAAGAG...ACTTGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAAGTACACTGGAAAAACACTaGTTGGTAGTCAGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIYQVLVTSTYCIAVNTSTLEKH*LVVRKN Trigger: GTTTTTCCTGACTACCAACCAGTGTTTTTCCAGTGT...ACTTGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGGCTCCATCCCTATGCTaGTCCTTTTTCTTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGSKQASTYNLLLPPKCQAPSLC*SFFFLL Trigger: GAGGAGAAAGAAAAAGGACAAGCATAGGGATGGAGC...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTTCTAGCAACGAAGACTaGCCTCCGCCTGTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFKYHSPLPYLITLITDISSNED*PPPVGP Trigger: GGGACCCACAGGCGGAGGCAAGTCTTCGTTGCTAGA...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTCCAAACAAGCCTCGACCTACAATCTGCTTCTGCCTCCTAAGTGCCAGCCTTTGGATCTTTCCTaGCTGCTAAGACATCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSKQASTYNLLLPPKCQPLDLS*LLRHLA Trigger: TGCTAGATGTCTTAGCAGCAAGGAAAGATCCAAAGG...CTGGCACTTAGGAGGCAGAAGCAGATTGTAGGTCGAGGCTTGTTTGGACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACCAGACTGGCTTCTCTCCCTaGGAAGGCTCTTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVPKVTVRCPDLSSTRYQTGFSP*EGSSVL Trigger: CAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGT...CTGGTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
||
| CDS-3UTR CAA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCTCTAGCAACGAAGACTaGCCTCCGCCTGTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPSSNED*PPPVGP Trigger: GGGACCCACAGGCGGAGGCAAGTCTTCGTTGCTAGA...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACCAGAACTCCAGCTCTATTTaGCATTCCAGCGGCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: TVPKVTVRCPDLSSTRYQNSSSI*HSSGII Trigger: TATGATGCCGCTGGAATGCAAAATAGAGCTGGAGTT...CTGGTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
||
| CDS-3UTR CAA 90 bp | GATGCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACCAGCATTCGCTGTGCTaGAGTCCAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DALIYQVLVTSTYCIAVNQHSLC*SPNQSW Trigger: CCACGACTGGTTTGGACTCAAGCACAGCGAATGCTG...GTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | TCCACAGTCCCCAAGGTGACAGTTCGATGCCCTGATTTATCAAGTACTCGTTACGCTCTTCAGTCTTGTTaGCTTCATTGTCTTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STVPKVTVRCPDLSSTRYALQSC*LHCLVP Trigger: AGGAACAAGACAATGAAGCAAACAAGACTGAAGAGC...GTAACGAGTACTTGATAAATCAGGGCATCGAACTGTCACCTTGGGGACTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCCAGCATTCGCTGTGCTaGAGTCCAAACCAGTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPQHSLC*SPNQSW Trigger: CCACGACTGGTTTGGACTCAAGCACAGCGAATGCTG...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAACTGGCTTCTCTCCCTaGGAAGGCTCTTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALIYQVLVTSTYCIAVNTTGFSP*EGSSVL Trigger: CAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGT...TGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTCCTTTGGATCTTTCCTaGCTGCTAAGACATCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGEGHGRNDKNTVVMNGIPLDLS*LLRHLA Trigger: TGCTAGATGTCTTAGCAGCAAGGAAAGATCCAAAGG...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
||
| CDS-3UTR CAA 90 bp | TATCGAATAATAGAAGGCTATAAATTCACAGACTATTCAAGTACCACTCTCCCCACTGGCTTCTCTCCCTaGGAAGGCTCTTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRIIEGYKFTDYSSTTLPTGFSP*EGSSVL Trigger: CAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGT...GGGGAGAGTGGTACTTGAATAGTCTGTGAATTTATAGCCTTCTATTATTCGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | CTATTCAAGTACCACTCTCCCCTCCCCTACCTGATTACCTTGATTACTGATATTAACTCCAGCTCTATTTaGCATTCCAGCGGCATCATA | + |
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Preference number: 5 (lower is better) Translates to: LFKYHSPLPYLITLITDINSSSI*HSSGII Trigger: TATGATGCCGCTGGAATGCAAAATAGAGCTGGAGTT...AATATCAGTAATCAAGGTAATCAGGTAGGGGAGGGGAGAGTGGTACTTGAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | GGAGGAGAGGGGCATGGGAGAAATGACAAAAATACAGTAGTCATGAATGGAATTGATCTAATTCAGCTTTaGTTTCTCCATAGATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GGEGHGRNDKNTVVMNGIDLIQL*FLHRWQ Trigger: CTGCCATCTATGGAGAAACAAAAGCTGAATTAGATC...AATTCCATTCATGACTACTGTATTTTTGTCATTTCTCCCATGCCCCTCTCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR CAA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACAACTCCAGCTCTATTTaGCATTCCAGCGGCATCATA | + |
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Preference number: 5 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDNSSSI*HSSGII Trigger: TATGATGCCGCTGGAATGCAAAATAGAGCTGGAGTT...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACGCTCTTCAGTCTTGTTaGCTTCATTGTCTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDALQSC*LHCLVP Trigger: AGGAACAAGACAATGAAGCAAACAAGACTGAAGAGC...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACGATCTAATTCAGCTTTaGTTTCTCCATAGATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDDLIQL*FLHRWQ Trigger: CTGCCATCTATGGAGAAACAAAAGCTGAATTAGATC...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031822.13 ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAGTCTTGTTTGCTTCATaGTCTTGTTCCTCTCTATTT | + |
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Preference number: 5 (lower is better) Translates to: ALIYQVLVTSTYCIAVNTVLFAS*SCSSLF Trigger: AAATAGAGAGGAACAAGACAATGAAGCAAACAAGAC...TGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAGGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143752.8 |
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| CDS-3UTR CAA 90 bp | TATCTAGAATTCAAGTCTCTCTCCCTTTTTCAAACTAGAAAGTCTGCCCATGACTCCTGGACAAAACTCTaGTCCCAAGAATTCATTATA | + |
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Preference number: 5 (lower is better) Translates to: YLEFKSLSLFQTRKSAHDSWTKL*SQEFII Trigger: TATAATGAATTCTTGGGACAAGAGTTTTGTCCAGGA...GTCATGGGCAGACTTTCTAGTTTGAAAAAGGGAGAGAGACTTGAATTCTAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR CAA 90 bp | CCAAAGTCCCCAACCAGAAAGATAATACATTTTACAATAGGTTCCAGACTTCTAGTCTTGTTTGCTTCATaGTCTTGTTCCTCTCTATTT | + |
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Preference number: 5 (lower is better) Translates to: PKSPTRKIIHFTIGSRLLVLFAS*SCSSLF Trigger: AAATAGAGAGGAACAAGACAATGAAGCAAACAAGAC...TAGAAGTCTGGAACCTATTGTAAAATGTATTATCTTTCTGGTTGGGGACTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031822.13 |
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| CDS-3UTR CAA 90 bp | CTGATTTATCAAGTACTCGTTACCAGTACATATTGCATAGCTGTTAACACAAGTGATCTAATTCAGCTTTaGTTTCTCCATAGATGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LIYQVLVTSTYCIAVNTSDLIQL*FLHRWQ Trigger: CTGCCATCTATGGAGAAACAAAAGCTGAATTAGATC...ACTTGTGTTAACAGCTATGCAATATGTACTGGTAACGAGTACTTGATAAATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143752.8 ENSMUST00000145685.2 |
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| CDS TCA 72 bp | CGCAGGGTTGTTGTAGGGCTCACAGTGGTAACCTGCTaGTGCAAAGTACTCCAAGGCCTTCTGTGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRVVVGLTVVTC*CKVLQGLLCWP Trigger: GGGCCAGCACAGAAGGCCTTGGAGTACTTTGCATCAGCAGGTTACCACTGTGAGCCCTACAACAACCCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS TCA 72 bp | GGTGCCCATCACAACGTCATCTTGAACCACATAACCTaGACAGCATTTGAAATGGGCAGGTTGAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAHHNVILNHIT*TAFEMGRLRCS Trigger: GGAGCACCTCAACCTGCCCATTTCAAATGCTGTTCAGGTTATGTGGTTCAAGATGACGTTGTGATGGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 ENSMUST00000145161.8 ENSMUST00000204948.2 |
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| CDS TCA 72 bp | AACAGAAGCTTGAGGGTTCCCGAGCAAGTTTTTAAATaGGCGCCTGGCAATCCATCGGAGCTGGTGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: NRSLRVPEQVFK*APGNPSELVTE Trigger: TTCTGTCACCAGCTCCGATGGATTGCCAGGCGCTCATTTAAAAACTTGCTCGGGAACCCTCAAGCTTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 ENSMUST00000145685.2 |
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| CDS TCA 72 bp | AAAGCTGTGAAGCCATATCGAGGAATGCTAAAGTACTaGAGCCAGGACAGCCAAGGCCCAATGGTTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KAVKPYRGMLKY*SQDSQGPMVLR Trigger: TCTCAGAACCATTGGGCCTTGGCTGTCCTGGCTTCAGTACTTTAGCATTCCTCGATATGGCTTCACAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000203146.3 |
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| CDS TCA 72 bp | CACCAAGAGGCCAGAAAAGAGTTGAACCACATAACCTaGACAGCATTTGAAATGGGCAGGTTGAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HQEARKELNHIT*TAFEMGRLRCS Trigger: GGAGCACCTCAACCTGCCCATTTCAAATGCTGTTCAGGTTATGTGGTTCAACTCTTTTCTGGCCTCTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203146.3 |
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| CDS TCA 72 bp | GAAGAGTTTCTTCTCCACTACGAACAGCTCCACAGCTaGCACACTGGAAAAACACTGGTTGGTAGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EEFLLHYEQLHS*HTGKTLVGSQE Trigger: TTCCTGACTACCAACCAGTGTTTTTCCAGTGTGTCAGCTGTGGAGCTGTTCGTAGTGGAGAAGAAACTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 72 bp | CTGGCTTCTCTCCCTTGGAAGGCTCTTCAGTCTTGTTaGCTTCATTGTCTTGTTCCTCTCTATTTAACATCA | + |
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Preference number: 6 (lower is better) Translates to: LASLPWKALQSC*LHCLVPLYLTS Trigger: TGATGTTAAATAGAGAGGAACAAGACAATGAAGCAAACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 72 bp | TCTCCCTTGGAAGGCTCTTCAGTCTTGTTTGCTTCATaGTCTTGTTCCTCTCTATTTAACATCACAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SPLEGSSVLFAS*SCSSLFNITAE Trigger: TTCTGCTGTGATGTTAAATAGAGAGGAACAAGACAATGAAGCAAACAAGACTGAAGAGCCTTCCAAGGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 72 bp | ATTACTGGCTTCTCTCCCTTGGAAGGCTCTTCAGTCTaGTTTGCTTCATTGTCTTGTTCCTCTCTATTTAAC | + |
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Preference number: 6 (lower is better) Translates to: ITGFSPLEGSSV*FASLSCSSLFN Trigger: GTTAAATAGAGAGGAACAAGACAATGAAGCAAACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 90 bp | AAATTTTCTATTACTGGCTTCTCTCCCTTGGAAGGCTCTTCAGTCTaGTTTGCTTCATTGTCTTGTTCCTCTCTATTTAACATCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: KFSITGFSPLEGSSV*FASLSCSSLFNITA Trigger: TGCTGTGATGTTAAATAGAGAGGAACAAGACAATGAAGCAAACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGTAATAGAAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 72 bp | AACTCAGATAAATTTTCTATTACTGGCTTCTCTCCCTaGGAAGGCTCTTCAGTCTTGTTTGCTTCATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: NSDKFSITGFSP*EGSSVLFASLS Trigger: AGACAATGAAGCAAACAAGACTGAAGAGCCTTCCAAGGGAGAGAAGCCAGTAATAGAAAATTTATCTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 |
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| CDS CAA 72 bp | GTTGGTAGTCAGGAAAAACAAAACTCCAGCTCTATTTaGCATTCCAGCGGCATCATATTTCAGATCAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VGSQEKQNSSSI*HSSGIIFQIKV Trigger: TACTTTGATCTGAAATATGATGCCGCTGGAATGCAAAATAGAGCTGGAGTTTTGTTTTTCCTGACTACCAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031822.13 ENSMUST00000114294.8 ENSMUST00000143752.8 ENSMUST00000145685.2 |
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