RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZYX (Homo sapiens)

Ensembl gene IDs: ENSG00000159840

Ensembl transcript IDs: ENST00000322764.10, ENST00000354434.8, ENST00000392910.6, ENST00000436448.1, ENST00000446634.1, ENST00000449630.5, ENST00000457235.5, ENST00000468083.1, ENST00000477373.1, ENST00000497119.1, ENST00000642783.1, ENST00000643962.1, ENST00000644767.1, ENST00000644791.1, ENST00000644808.1, ENST00000645428.1, ENST00000645637.1, ENST00000646695.2, ENST00000647126.1, ENST00000647142.1

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAA +
Preference number: 1 (lower is better)
Translates to: GSCIPRPCWVLGQGT*DAREGLEMGGARHQ
Trigger: TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 2 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPALGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGCCGAGGGCGCGGGTaGAGCAGTGAAAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGRGRG*SSESSS
Trigger: GCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGGCCGAGGGCGCGGGTaGAGCAGTGAAAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVGRGRG*SSESSS
Trigger: GCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 2 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPADHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 2 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPALRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGCCGAGGGCGCGGGTaGAGCAGTGAAAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGRGRG*SSESSS
Trigger: GCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 2 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQDHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 2 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GQGTWDAREGLEMGGARHQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 2 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRLGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: QGTWDAREGLEMGGARHQWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCATCAAAACAATAACTaGGGTGGGGGCAGGTGGTCT +
Preference number: 2 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQHQNNN*GGGRWS
Trigger: AGACCACCTGCCCCCACCTCAGTTATTGTTTTGATG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 2 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 2 (lower is better)
Translates to: FVAIATTWQHGGGWECPGDHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCATCAAAACAATAACTaGGGTGGGGGCAGGTGGTCT +
Preference number: 2 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVHQNNN*GGGRWS
Trigger: AGACCACCTGCCCCCACCTCAGTTATTGTTTTGATG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: FVAIATTWQHGGGWECPGQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 2 (lower is better)
Translates to: FVAIATTWQHGGGWECPGVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 2 (lower is better)
Translates to: FVAIATTWQHGGGWECPGGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR CCA 72 bp GGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: GGDPASLDHVGS*VRAPGMLGRGW
Trigger: CCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
3UTR CCA 72 bp ATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: IPRPCWVLGQGT*DAREGLEMGGA
Trigger: AGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWARARG*WHRPQS
Trigger: ACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGCCGAGGGCGCGGGTaGAGCAGTGAAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGRGRG*SSESSS
Trigger: GCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGACCTGGTTTTGGTTCTaGGCCGGTGGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGTWFWF*AGGGTG
Trigger: CCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGGT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAARARG*WHRPQS
Trigger: ACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTGGCCTGGTCCACGATaGAGGAGGTGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGWPGPR*RRCPPG
Trigger: CCCTGGAGGGCACCTCCTTCATCGTGGACCAGGCCA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGTGGCCTGGTCCACGATaGAGGAGGTGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWWPGPR*RRCPPG
Trigger: CCCTGGAGGGCACCTCCTTCATCGTGGACCAGGCCA...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTGGCCCTGGAGCTGCTaGGCACACTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGWPWSC*AHWWQV
Trigger: CACCTGCCACCAGTGTGCGCAGCAGCTCCAGGGCCA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGCGGGTGATAGGCCTTaGCCGTGGCCCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWAGDRP*PWPSAC
Trigger: GCATGCTGAGGGCCACGGGCAAGGCCTATCACCCGC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGGCTGGAGCCGGAGATaGGGCTGGGGGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVGWSRR*GWGPSG
Trigger: CCCCGAGGGCCCCCAGCCTCATCTCCGGCTCCAGCC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQARARG*WHRPQS
Trigger: ACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGTCCCAGAGCACCCTCTaGATCGTCGCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWSQSTL*IVAIPS
Trigger: GCTGGGGATGGCGACGATGCAGAGGGTGCTCTGGGA...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGAMWNS*PRARTA
Trigger: AGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTGGGGCCGGTTGGCCTaGTCCACGATGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGWGRLA*STMKEV
Trigger: CACCTCCTTCATCGTGGACCAGGCCAACCGGCCCCA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGCTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGCGCAGACCACACAGGTaGAGCAGTGCGGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWRRPHR*SSAGDR
Trigger: CCTATCACCCGCACTGCTTCACCTGTGTGGTCTGCG...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTGCTGTGCCCCCGGCTaGAGGCTTGGTACTGGACTT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGCCAPG*RLGTGL
Trigger: AAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGCGGGTGATAGGCCTTaGCCGTGGCCCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEAGDRP*PWPSAC
Trigger: GCATGCTGAGGGCCACGGGCAAGGCCTATCACCCGC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCGGGTGATAGGCCTTaGCCGTGGCCCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAGDRP*PWPSAC
Trigger: GCATGCTGAGGGCCACGGGCAAGGCCTATCACCCGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGAGGGGAAGATTCGTaGCCCACATTCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGGEDS*PTFPTP
Trigger: GGGAGTCGGGAATGTGGGGCACGAATCTTCCCCTCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGAGCGCACCCGGCCTaGCTGCTGCTGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGAHPA*LLLSSP
Trigger: GGGGCTGCTCAGCAGCAGGCAGGCCGGGTGCGCTCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGTGCTGCGCACACTGGTaGCAGGTGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWCCAHW*QVKQAM
Trigger: CATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCA...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCAGCATGGGGGAGGGTaGGAATGTCCTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGQHGGG*ECPGGS
Trigger: AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCAGGCGCAGGGGGAAATaGTTCCTCGATCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPARRRGK*FLDRGR
Trigger: CCTCCCCCGATCGAGGAATCATTTCCCCCTGCGCCT...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATACCTGGTTTTGGTTCTaGGCCGGTGGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHTWFWF*AGGGTG
Trigger: CCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGGT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGCCGCAGAGTTCGTTaGCAGCCACATTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGRRVR*QPHSAS
Trigger: AGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGCCGCAGAGTTCGTTaGCAGCCACATTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGRRVR*QPHSAS
Trigger: AGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKARARG*WHRPQS
Trigger: ACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCACACTGGTGGCAGGTaGAGCAGGCGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGHTGGR*SRRCGT
Trigger: TGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTGGCCTGGTCCACGATaGAGGAGGTGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHWPGPR*RRCPPG
Trigger: CCCTGGAGGGCACCTCCTTCATCGTGGACCAGGCCA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCACATATCCAGATaGCACCTGTGGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGHISR*HLWWGR
Trigger: CCGCCCCCACCACAGGTGTCATCTGGATATGTGCCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354434.8
ENST00000643962.1
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCACCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAMWNS*PRARTA
Trigger: AGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWETVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCTGCTCACCTTCTCCCTaGGCTGTGGTGGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPACSPSP*AVVGAV
Trigger: TACCGCCCCCACCACAGCCCAGGGAGAAGGTGAGCA...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGACTTGGAACTGAATaGAGTGGCCACTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGLGTE*SGHWWG
Trigger: CCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWESCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGTGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATAGGCGCAGGGGGAAATaGTTCCTCGATCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHRRRGK*FLDRGR
Trigger: CCTCCCCCGATCGAGGAATCATTTCCCCCTGCGCCT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPALGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCACCCTGGTTTTGGTTCTaGGCCGGTGGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPPWFWF*AGGGTG
Trigger: CCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGGG...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTCCCAGAGCACCCTCTaGATCGTCGCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHSQSTL*IVAIPS
Trigger: GCTGGGGATGGCGACGATGCAGAGGGTGCTCTGGGA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGTGGGGGCACGGGGTaGTGCTTCTCCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGGGTG*CFSCTR
Trigger: CCGAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGATGCTCCATGTCCTaGATTAGCTGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGCSMS*ISCWVS
Trigger: GCTGACCCAGCAGCTAATGCAGGACATGGAGCATCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQAMWNS*PRARTA
Trigger: AGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGGCCCTGGAGCTGCTaGGCACACTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQWPWSC*AHWWQV
Trigger: CACCTGCCACCAGTGTGCGCAGCAGCTCCAGGGCCA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGCGGGTGATAGGCCTTaGCCGTGGCCCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQAGDRP*PWPSAC
Trigger: GCATGCTGAGGGCCACGGGCAAGGCCTATCACCCGC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGCCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGCCGAGGGCGCGGGTaGAGCAGTGAAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGRGRG*SSESSS
Trigger: GCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGATTCACTTTGGGCTTTaGGGCCACCACAGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGIHFGL*GHHRAE
Trigger: TTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAAT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTGCTCACCTTCTCCCTaGGCTGTGGTGGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHCSPSP*AVVGAV
Trigger: TACCGCCCCCACCACAGCCCAGGGAGAAGGTGAGCA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGAATGGAGTGGCCACTaGTGGGGGCACATATCCAGA +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWEWSGH*WGHISR
Trigger: TCTGGATATGTGCCCCCACCAGTGGCCACTCCATTC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGTTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGTGCTGCGCACACTGGTaGCAGGTGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWECCAHW*QVKQAM
Trigger: CATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCA...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHSCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQLGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEDHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWELRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCAGCATGGGGGAGGGTaGGAATGTCCTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAQHGGG*ECPGGS
Trigger: AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTACAACTTGGCAGCATaGGGGAGGGTGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGYNLAA*GRVGMS
Trigger: GGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGTACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCACCTGGTTTTGGTTCTaGGCCGGTGGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVTWFWF*AGGGTG
Trigger: CCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGGT...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGCCGCAGAGTTCGTTaGCAGCCACATTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGRRVR*QPHSAS
Trigger: AGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCACACTGGTGGCAGGTaGAGCAGGCGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAHTGGR*SRRCGT
Trigger: TGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCGCAGACCACACAGGTaGAGCAGTGCGGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHRRPHR*SSAGDR
Trigger: CCTATCACCCGCACTGCTTCACCTGTGTGGTCTGCG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTGGCCTGGTCCACGATaGAGGAGGTGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSWPGPR*RRCPPG
Trigger: CCCTGGAGGGCACCTCCTTCATCGTGGACCAGGCCA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATGGCCTGGTCCACGATaGAGGAGGTGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKWPGPR*RRCPPG
Trigger: CCCTGGAGGGCACCTCCTTCATCGTGGACCAGGCCA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTGCTGTGCCCCCGGCTaGAGGCTTGGTACTGGACTT +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHCCAPG*RLGTGL
Trigger: AAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGTGCTGTGCCCCCGGCTaGAGGCTTGGTACTGGACTT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQCCAPG*RLGTGL
Trigger: AAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCA...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGCCCTGGAGCTGCTaGGCACACTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVWPWSC*AHWWQV
Trigger: CACCTGCCACCAGTGTGCGCAGCAGCTCCAGGGCCA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAACGGTGGGCAATCCCTaGAGGATGGGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQTVGNP*RMGEDQ
Trigger: CTGGTCCTCGCCCATCCTGCAGGGATTGCCCACCGT...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGACTGCCGAGGAGTGGTaGAGCTCCCGTTACACTTCG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWETAEEW*SSRYTS
Trigger: CGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGT...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAAAGGCCGGGCGCACTaGCGAGGAGTGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSKGRAH*RGVVQL
Trigger: GAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAAAAGGCCGGGCGCACTaGCGAGGAGTGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKKGRAH*RGVVQL
Trigger: GAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTT...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGCTCACCTTCTCCCTaGGCTGTGGTGGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQCSPSP*AVVGAV
Trigger: TACCGCCCCCACCACAGCCCAGGGAGAAGGTGAGCA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCCAAAGACACAGGCTaGGTCTGGGACTGGACATGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAKDTG*VWDWTW
Trigger: CCATGTCCAGTCCCAGACCCAGCCTGTGTCTTTGGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGCCAAAGACACAGGCTaGGTCTGGGACTGGACATGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEAKDTG*VWDWTW
Trigger: CCATGTCCAGTCCCAGACCCAGCCTGTGTCTTTGGC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQSCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGGGGCCGGTTGGCCTaGTCCACGATGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQWGRLA*STMKEV
Trigger: CACCTCCTTCATCGTGGACCAGGCCAACCGGCCCCA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCTGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGTGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGTCCTCACTCAGGTCTaGGCTCTAGCAGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAVLTQV*ALAVWH
Trigger: GTGCCACACTGCTAGAGCCCAGACCTGAGTGAGGAC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQLGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCGCACTGCCGAGGAGTaGTGCAGCTCCCGTTACACT +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHRTAEE*CSSRYT
Trigger: AGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAGGCGCAGGGGGAAATaGTTCCTCGATCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSRRRGK*FLDRGR
Trigger: CCTCCCCCGATCGAGGAATCATTTCCCCCTGCGCCT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGCTGGGGCTGGGGCTaGACATGGAACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGWGWG*TWNCVW
Trigger: CCAGACACAGTTCCATGTTCAGCCCCAGCCCCAGCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGARARG*WHRPQS
Trigger: ACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCACACTGGTGGCAGGTaGAGCAGGCGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQHTGGR*SRRCGT
Trigger: TGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTCCCAGAGCACCCTCTaGATCGTCGCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSSQSTL*IVAIPS
Trigger: GCTGGGGATGGCGACGATGCAGAGGGTGCTCTGGGA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATGCTGTGCCCCCGGCTaGAGGCTTGGTACTGGACTT +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQCCAPG*RLGTGL
Trigger: AAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACCAAGGAGGCAGGGGTaGTGTGCCCCCGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGPRRQG*CAPGCR
Trigger: CCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSAMWNS*PRARTA
Trigger: AGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCT +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVAMWNS*PRARTA
Trigger: AGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTGGCCCTGGAGCTGCTaGGCACACTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRWPWSC*AHWWQV
Trigger: CACCTGCCACCAGTGTGCGCAGCAGCTCCAGGGCCA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGACTGCCGAGGAGTGGTaGAGCTCCCGTTACACTTCG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQTAEEW*SSRYTS
Trigger: CGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGT...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGTGGTGGGGGCGGTATaGGGGCCTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGVVGAV*GPQALP
Trigger: AGGGAGGGCCTGAGGCCCCCATACCGCCCCCACCAC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCTCACCTTCTCCCTaGGCTGTGGTGGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVCSPSP*AVVGAV
Trigger: TACCGCCCCCACCACAGCCCAGGGAGAAGGTGAGCA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGAATGGAGTGGCCACTaGTGGGGGCACATATCCAGA +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEEWSGH*WGHISR
Trigger: TCTGGATATGTGCCCCCACCAGTGGCCACTCCATTC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGACTTGGAACTGAATaGAGTGGCCACTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGLGTE*SGHWWG
Trigger: CCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCCGGAGCCGGAACCTaGGGCAGAGGCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAGAGT*GRGWEL
Trigger: CAGCTCCCAGCCTCTGCCCCAGGTTCCGGCTCCGGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATGCCAAAGACACAGGCTaGGTCTGGGACTGGACATGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHAKDTG*VWDWTW
Trigger: CCATGTCCAGTCCCAGACCCAGCCTGTGTCTTTGGC...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCATTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSSCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVSCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTGGGGCCGGTTGGCCTaGTCCACGATGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSWGRLA*STMKEV
Trigger: CACCTCCTTCATCGTGGACCAGGCCAACCGGCCCCA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGTCCTCACTCAGGTCTaGGCTCTAGCAGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQVLTQV*ALAVWH
Trigger: GTGCCACACTGCTAGAGCCCAGACCTGAGTGAGGAC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVLGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCTATAGCTACAACTTaGCAGCATGGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAIATT*QHGGGW
Trigger: CCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGATGACACCCGGGCTTTaGAAGGATCATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWMTPGL*KDHSWS
Trigger: TGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCAT...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGTACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCACTGGGGCTCCAGGACTaGACTTGGAAGCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPLGLQD*TWKPQE
Trigger: CTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAG...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCGCAGACCACACAGGTaGAGCAGTGCGGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSRRPHR*SSAGDR
Trigger: CCTATCACCCGCACTGCTTCACCTGTGTGGTCTGCG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGGCACATATCCAGATaGCACCTGTGGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGHISR*HLWWGR
Trigger: CCGCCCCCACCACAGGTGTCATCTGGATATGTGCCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354434.8
ENST00000643962.1
CDS-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTCCCAGAGCACCCTCTaGATCGTCGCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRSQSTL*IVAIPS
Trigger: GCTGGGGATGGCGACGATGCAGAGGGTGCTCTGGGA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGGTGCTGCTTCTCCTaGACTCGGGGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGCCFS*TRGFSL
Trigger: GAGGGAGAAGCCCCGAGTGCAGGAGAAGCAGCACCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGATGCTCCATGTCCTaGATTAGCTGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGCSMS*ISCWVS
Trigger: GCTGACCCAGCAGCTAATGCAGGACATGGAGCATCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAACCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGAGGGGAAGATTCGTaGCCCACATTCCCGACTCCC +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGGEDS*PTFPTP
Trigger: GGGAGTCGGGAATGTGGGGCACGAATCTTCCCCTCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGATTCACTTTGGGCTTTaGGGCCACCACAGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQIHFGL*GHHRAE
Trigger: TTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAAT...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCAGAGGCTGGGAGCTaGAAGGGGACTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPAEAGS*KGTSKE
Trigger: CTCCTTGGAAGTCCCCTTCCAGCTCCCAGCCTCTGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTGCTGCGCACACTGGTaGCAGGTGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSCCAHW*QVKQAM
Trigger: CATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCTGCGCACACTGGTaGCAGGTGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVCCAHW*QVKQAM
Trigger: CATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTGGGGCCGGTTGGCCTaGTCCACGATGAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRWGRLA*STMKEV
Trigger: CACCTCCTTCATCGTGGACCAGGCCAACCGGCCCCA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGTCCTCACTCAGGTCTaGGCTCTAGCAGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQVLTQV*ALAVWH
Trigger: GTGCCACACTGCTAGAGCCCAGACCTGAGTGAGGAC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVDHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGACCATGTTGGGTCCTaGGTCAGGGCACCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKDHVGS*VRAPGM
Trigger: CATCCCAGGTGCCCTGACCCAGGACCCAACATGGTC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAACTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAACAGCATGGGGGAGGGTaGGAATGTCCTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKQHGGG*ECPGGS
Trigger: AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTG...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCATGTCATCCAGCAGTaGGGACAGAGAGTCGATCTC +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQHVIQQ*GQRVDL
Trigger: GAGATCGACTCTCTGTCCTCACTGCTGGATGACATG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGTTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAACCTGGTTTTGGTTCTaGGCCGGTGGGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGTWFWF*AGGGTG
Trigger: CCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGGT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGCCGCAGAGTTCGTTaGCAGCCACATTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGRRVR*QPHSAS
Trigger: AGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGCCGCAGAGTTCGTTaGCAGCCACATTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGRRVR*QPHSAS
Trigger: AGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCACACTGGTGGCAGGTaGAGCAGGCGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSHTGGR*SRRCGT
Trigger: TGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTGCTGTGCCCCCGGCTaGAGGCTTGGTACTGGACTT +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRCCAPG*RLGTGL
Trigger: AAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCGGGTGATAGGCCTTaGCCGTGGCCCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAGDRP*PWPSAC
Trigger: GCATGCTGAGGGCCACGGGCAAGGCCTATCACCCGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGCAGCCATTGTCATCTaGCTCAATCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQAAIVI*LNRQGL
Trigger: AAGCCCCTGTCGATTGAGGCAGATGACAATGGCTGC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCAATGGGGCATGGACTaGGGTCTGAAGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSQWGMD*GLKRAC
Trigger: ACAGGCCCTCTTCAGACCGCAGTCCATGCCCCATTG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGACTTGGAACTGAATaGAGTGGCCACTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGLGTE*SGHWWG
Trigger: CCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCCAAAGACACAGGCTaGGTCTGGGACTGGACATGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPAKDTG*VWDWTW
Trigger: CCATGTCCAGTCCCAGACCCAGCCTGTGTCTTTGGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGTCCTCACTCAGGTCTaGGCTCTAGCAGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKVLTQV*ALAVWH
Trigger: GTGCCACACTGCTAGAGCCCAGACCTGAGTGAGGAC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGTCCTCACTCAGGTCTaGGCTCTAGCAGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVVLTQV*ALAVWH
Trigger: GTGCCACACTGCTAGAGCCCAGACCTGAGTGAGGAC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGTGTCTGGAAGACGGTaGGCAATCCCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKVSGRR*AIPAGW
Trigger: CCATCCTGCAGGGATTGCCCACCGTCTTCCAGACAC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCAGCATGGGGGAGGGTaGGAATGTCCTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRQHGGG*ECPGGS
Trigger: AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATACAACTTGGCAGCATaGGGGAGGGTGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQYNLAA*GRVGMS
Trigger: GGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGATGACACCCGGGCTTTaGAAGGATCATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEMTPGL*KDHSWS
Trigger: TGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCAT...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCACACTGGTGGCAGGTaGAGCAGGCGATGTGGAACA +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRHTGGR*SRRCGT
Trigger: TGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCATCAAAACAATAACTaGGGTGGGGGCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHHQNNN*GGGRWS
Trigger: AGACCACCTGCCCCCACCTCAGTTATTGTTTTGATG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATCCCAGAGCACCCTCTaGATCGTCGCCATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGSQSTL*IVAIPS
Trigger: GCTGGGGATGGCGACGATGCAGAGGGTGCTCTGGGA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCTCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPASPNQY*SPSPWA
Trigger: AGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGA...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAATGTCCTGCATTAGCTaGTGGGTCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKMSCIS*WVSCSS
Trigger: GCTGGAGCAGCTGACCCAGCAGCTAATGCAGGACAT...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGATGCTCCATGTCCTaGATTAGCTGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGCSMS*ISCWVS
Trigger: GCTGACCCAGCAGCTAATGCAGGACATGGAGCATCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTATTCACTTTGGGCTTTaGGGCCACCACAGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSIHFGL*GHHRAE
Trigger: TTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAAT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGAATGGAGTGGCCACTaGTGGGGGCACATATCCAGA +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVEWSGH*WGHISR
Trigger: TCTGGATATGTGCCCCCACCAGTGGCCACTCCATTC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGAATGGAGTGGCCACTaGTGGGGGCACATATCCAGA +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSEWSGH*WGHISR
Trigger: TCTGGATATGTGCCCCCACCAGTGGCCACTCCATTC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGACTTGGAACTGAATaGAGTGGCCACTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGLGTE*SGHWWG
Trigger: CCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGCCAAAGACACAGGCTaGGTCTGGGACTGGACATGG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRAKDTG*VWDWTW
Trigger: CCATGTCCAGTCCCAGACCCAGCCTGTGTCTTTGGC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGGCCCTCGGGGCTaGGTGTTAGCCAAAGACACA +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGGGPRG*VLAKDT
Trigger: TGTGTCTTTGGCTAACACCCAGCCCCGAGGGCCCCC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATTGGTTCTGAGCCGGTaGGGGCACGGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGLVLSR*GHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRVKQAM*NSCPRA
Trigger: CGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCAC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAAGCTGCTGCGCACACTaGTGGCAGGTGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGSCCAH*WQVKQA
Trigger: CGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTGGGCTCTAGCAGTGTaGCACTTCCGACAGAGCACG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRWALAV*HFRQST
Trigger: CGTGCTCTGTCGGAAGTGCCACACTGCTAGAGCCCA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACTGGGTCAGGGCACCTaGGATGCTAGGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGLGQGT*DAREGL
Trigger: CAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTACAACTTGGCAGCATaGGGGAGGGTGGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVYNLAA*GRVGMS
Trigger: GGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCTATAGCTACAACTTaGCAGCATGGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSAIATT*QHGGGW
Trigger: CCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGATGACACCCGGGCTTTaGAAGGATCATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQMTPGL*KDHSWS
Trigger: TGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCAT...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACATCAAAACAATAACTaGGGTGGGGGCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QGTWDAREGLEMGGARHQHQNNN*GGGRWS
Trigger: AGACCACCTGCCCCCACCTCAGTTATTGTTTTGATG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGCAGCCATTGTCATCTaGCTCAATCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVAAIVI*LNRQGL
Trigger: AAGCCCCTGTCGATTGAGGCAGATGACAATGGCTGC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCAGCCATTGTCATCTaGCTCAATCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSAAIVI*LNRQGL
Trigger: AAGCCCCTGTCGATTGAGGCAGATGACAATGGCTGC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGCAGCCATTGTCATCTaGCTCAATCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKAAIVI*LNRQGL
Trigger: AAGCCCCTGTCGATTGAGGCAGATGACAATGGCTGC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACCAGGGCGGGGATCCTaGATCCCTAGACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGPGRGS*IPRPCW
Trigger: CCAACATGGTCTAGGGATGCAGGATCCCCGCCCTGG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACTCAGGTGGGGTGTCTaGAAGACGGTGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGLRWGV*KTVGNP
Trigger: GGGATTGCCCACCGTCTTCCAGACACCCCACCTGAG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGACAGCATGGGGGAGGGTaGGAATGTCCTGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGQHGGG*ECPGGS
Trigger: AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTG...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGCTATAGCTACAACTTaGCAGCATGGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRAIATT*QHGGGW
Trigger: CCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCATGTCATCCAGCAGTaGGGACAGAGAGTCGATCTC +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRHVIQQ*GQRVDL
Trigger: GAGATCGACTCTCTGTCCTCACTGCTGGATGACATG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCATTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGATFCL*GCSMSC
Trigger: GCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCATCAAAACAATAACTaGGGTGGGGGCAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSHQNNN*GGGRWS
Trigger: AGACCACCTGCCCCCACCTCAGTTATTGTTTTGATG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGTTGAGGGGAGCCTGTaGCAGCAGAAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGVEGSL*QQKELR
Trigger: CCGAAGCTCTTTCTGCTGGCACAGGCTCCCCTCAAC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQGTWDAREGLEMGGARHKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGGAGGGGTTGGAAATaGGAGGGGCTAGACATCAAA +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGRGWK*EGLDIK
Trigger: TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAATCCCTAGACCATGTTaGGTCCTGGGTCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGIPRPC*VLGQGT
Trigger: GGTGCCCTGACCCAGGACCCAACATGGTCTAGGGAT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTTTTTGATTTGGTTGTaGCCCAGATCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRFLIWL*PRSTWG
Trigger: GCCCCAGGTGGATCTGGGTCACAACCAAATCAAAAA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR TCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSSPNQY*SPSPWA
Trigger: AGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGATGCTCCATGTCCTaGATTAGCTGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGGCSMS*ISCWVS
Trigger: GCTGACCCAGCAGCTAATGCAGGACATGGAGCATCC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAATTCACTTTGGGCTTTaGGGCCACCACAGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGIHFGL*GHHRAE
Trigger: TTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAAT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGAAGGGATTCACTTTaGGCTTTGGGGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGGRDSL*ALGPPQ
Trigger: CTGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATGGTCTCAGTGTGGGTaGTCCACAATGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGWSQCG*STMGHG
Trigger: TCCATGCCCCATTGTGGACCACCCACACTGAGACCA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCTATAGCTACAACTTaGCAGCATGGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAIATT*QHGGGW
Trigger: CCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATACTGGACTTGGAACTaGATGGAGTGGCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGYWTWN*MEWPLV
Trigger: CACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGGTGCCCCAATTTTTaGTTTGGTTGTGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGCPNF*FGCDPD
Trigger: ATCTGGGTCACAACCAAATCAAAAATTGGGGCACCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRSPNQY*SPSPWA
Trigger: AGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCAGCCATTGTCATCTaGCTCAATCGACAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAAIVI*LNRQGL
Trigger: AAGCCCCTGTCGATTGAGGCAGATGACAATGGCTGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SASEDAPCPALAAGSAAPKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CCA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AIATTWQHGGGWECPGGSKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR TCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAATGACACCCGGGCTTTaGAAGGATCATTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGMTPGL*KDHSWS
Trigger: TGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCAT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR GCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGSPNQY*SPSPWA
Trigger: AGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CCA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAAAACTTAGGAGTCACTaGAGAAAACTTAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVAIATTWQHGGGWECPGKLRSH*RKLRGW
Trigger: CCAGCCCCTAAGTTTTCTCCAGTGACTCCTAAGTTT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS GCA 90 bp GCGCCGCGTCTCGGGTGGCCGCCTCGGCGCCGGGTCCGCAGACTCTaGGTCCCGGTCCGGAGCAGCCTCCAGCCGGGCGGGGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: APRLGWPPRRRVRRL*VPVRSSLQPGGEGH
Trigger: GTGTCCCTCCCCGCCCGGCTGGAGGCTGCTCCGGACCGGGACGCAGAGTCTGCGGACCCGGCGCCGAGGCGGCCACCCGAGACGCGGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449630.5
ENST00000647126.1
CDS CCA 90 bp GGCAGGGGAAAGTCGCAGGCCGGAGCGTGCGCGCCGCGTCTCGGGTaGCCGCCTCGGCGCCGGGTCCGCAGACTCTGCGTCCCGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GRGKSQAGACAPRLG*PPRRRVRRLCVPVR
Trigger: CCGGACCGGGACGCAGAGTCTGCGGACCCGGCGCCGAGGCGGCCACCCGAGACGCGGCGCGCACGCTCCGGCCTGCGACTTTCCCCTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449630.5
ENST00000647126.1
CDS CCA 90 bp CCCTGGAGCTGCTGCGCACACTGGTGGCAGGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCGCGGACGGCTGGCTGCGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PWSCCAHWWQVKQAM*NSCPRARTAGCARA
Trigger: GGCCCGGGCGCAGCCAGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCAGCTCCAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS-3UTR CAA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGCGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWRPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGRPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS TCA 90 bp AGCTGCCCTAGAGCGCGGACGGCTGGCTGCGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGTTCGTTGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SCPRARTAGCARARG*WHRPQSSLTATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCGCAGCCAGCCGTCCGCGCTCTAGGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000497119.1
ENST00000643962.1
ENST00000644808.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPARPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQRPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHRPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCCCCCGGCTGCAGGCTaGGTACTGGACTTGGAACTG +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGPPAAG*VLDLEL
Trigger: CAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACGCCCGGGCCAGGGGTaGATGGCATCGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQRPGQG*MASAAE
Trigger: CTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGACACAGTGGGGCCGGTaGGCCTGGTCCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGTQWGR*AWSTMK
Trigger: CTTCATCGTGGACCAGGCCAACCGGCCCCACTGTGT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGATTCACTTTGGGCTTaGGGGCCACCACAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGDSLWA*GPPQGR
Trigger: TCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGGAGCGCACCTGGTTTaGGTTCTGAGCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAGAHLV*VLSRWG
Trigger: CCCCCACCGGCTCAGAACCAAAACCAGGTGCGCTCC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGRPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGCGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWRPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATCCCAGGCGGGGGACTaGGAACGGTCCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQSQAGD*ERSQEP
Trigger: GGGCTCCTGGGACCGTTCCAAGTCCCCCGCCTGGGA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS GCA 90 bp GAGGTGGAGGCAGGGGAAAGTCAGGTCAGGAAAGGCCGGGCGCACTaGCGAGGAGTGGTGCAGCTCCCGTTACACTTCGGAAAACGGACC +
Preference number: 5 (lower is better)
Translates to: EVEAGESQVRKGRAH*RGVVQLPLHFGKRT
Trigger: GGTCCGTTTTCCGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTTCCTGACCTGACTTTCCCCTGCCTCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATCCCAGGCGGGGGACTaGGAACGGTCCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKSQAGD*ERSQEP
Trigger: GGGCTCCTGGGACCGTTCCAAGTCCCCCGCCTGGGA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS GCA 90 bp GGGAAAGTCAGGTCAGGAAAGGCCGGGCGCACTGCCGAGGAGTGGTaGAGCTCCCGTTACACTTCGGAAAACGGACCCGGAGGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GKVRSGKAGRTAEEW*SSRYTSENGPGGED
Trigger: ATCTTCCCCTCCGGGTCCGTTTTCCGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTTCCTGACCTGACTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS-3UTR CAA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWGLVLD*ELNGVA
Trigger: GGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCCCCCGGCTGCAGGCTaGGTACTGGACTTGGAACTG +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHPPAAG*VLDLEL
Trigger: CAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGG...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCCCGGCTGCAGGCTaGGTACTGGACTTGGAACTG +
Preference number: 5 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQPPAAG*VLDLEL
Trigger: CAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPARPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGTTCATGTGGAAGTTCTaGTCCAGGGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGFMWKF*SRATTR
Trigger: GCGAGTGGTCGCCCTGGACAAGAACTTCCACATGAA...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGAGGGGGAAGCAGCCATaGTCATCTGCCTCAATCGAC +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGRGKQP*SSASID
Trigger: GTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCT...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS TCA 90 bp TGCCTCCAAGAACCTTCCCAGGCCAGCCTACCCGGCTTCTTCCGATaGGGCTTAGCTCCCAGCTCGTGTCCCAGATGCTCAGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: CLQEPSQASLPGFFR*GLAPSSCPRCSGLT
Trigger: GGTCAAGCCTGAGCATCTGGGACACGAGCTGGGAGCTAAGCCTCATCGGAAGAAGCCGGGTAGGCTGGCCTGGGAAGGTTCTTGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCCGGAAGGGATTCACTTaGGGCTTTGGGGCCACCACA +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPARKGFT*GFGATT
Trigger: TGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCG...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGAGCGCACCTGGTTTaGGTTCTGAGCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGAHLV*VLSRWG
Trigger: CCCCCACCGGCTCAGAACCAAAACCAGGTGCGCTCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGAGCGCACCTGGTTTaGGTTCTGAGCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGAHLV*VLSRWG
Trigger: CCCCCACCGGCTCAGAACCAAAACCAGGTGCGCTCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SYNLAAWGRVGMSWRVSQRPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...CTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAACACAGTGGGGCCGGTaGGCCTGGTCCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQTQWGR*AWSTMK
Trigger: CTTCATCGTGGACCAGGCCAACCGGCCCCACTGTGT...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGAGCAGCCCCTGGTTTaGGTTCTGAGCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SASEDAPCPALAAGSAAPEQPLV*VLSRWG
Trigger: CCCCCACCGGCTCAGAACCAAAACCAGGGGCTGCTC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CAA 90 bp GGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGGATGACACCCGGGCTTaGAAAGGATCATTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GSWVRAPGMLGRGWKWEGDDTRA*KGSFLV
Trigger: GACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATC...CCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAGLVLD*ELNGVA
Trigger: GGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCCCGGCTGCAGGCTaGGTACTGGACTTGGAACTG +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSPPAAG*VLDLEL
Trigger: CAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGG...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGAGCGCACCTGGTTTaGGTTCTGAGCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGAHLV*VLSRWG
Trigger: CCCCCACCGGCTCAGAACCAAAACCAGGTGCGCTCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAACGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQRPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCACACAGTGGGGCCGGTaGGCCTGGTCCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVTQWGR*AWSTMK
Trigger: CTTCATCGTGGACCAGGCCAACCGGCCCCACTGTGT...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCTTCATGTGGAAGTTCTaGTCCAGGGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAFMWKF*SRATTR
Trigger: GCGAGTGGTCGCCCTGGACAAGAACTTCCACATGAA...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWESYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPASYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS GCA 90 bp GCGCACCTGCAATCCCAACATTTTCCTCACACTCTAGAGGGCTGCTaGCTCCAAGAACCTTCCCAGGCCAGCCTACCCGGCTTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: AHLQSQHFPHTLEGC*LQEPSQASLPGFFR
Trigger: TCGGAAGAAGCCGGGTAGGCTGGCCTGGGAAGGTTCTTGGAGGCAGCAGCCCTCTAGAGTGTGAGGAAAATGTTGGGATTGCAGGTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS GCA 90 bp GGAGCGCACCTGCAATCCCAACATTTTCCTCACACTCTAGAGGGCTaGTGCCTCCAAGAACCTTCCCAGGCCAGCCTACCCGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GAHLQSQHFPHTLEG*CLQEPSQASLPGFF
Trigger: GAAGAAGCCGGGTAGGCTGGCCTGGGAAGGTTCTTGGAGGCAGCAGCCCTCTAGAGTGTGAGGAAAATGTTGGGATTGCAGGTGCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGATTCACTTTGGGCTTaGGGGCCACCACAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSDSLWA*GPPQGR
Trigger: TCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGATTCACTTTGGGCTTaGGGGCCACCACAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKDSLWA*GPPQGR
Trigger: TCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCCCCCGGCTGCAGGCTaGGTACTGGACTTGGAACTG +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRPPAAG*VLDLEL
Trigger: CAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SASEDAPCPALAAGSAAPGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CAA 90 bp GGGCGGGGATCCTGCATCCCTAGACCATGTTGGGTCCTGGGTCAGGGCACCTGGGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: GRGSCIPRPCWVLGQGTWAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...CCAGGTGCCCTGACCCAGGACCCAACATGGTCTAGGGATGCAGGATCCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCCGGCCGCAGAGTTCGTaGACAGCCACATTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SYSYNLAAWGRVGMSWRVRPQSS*TATFCL
Trigger: GAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG...GACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATAGGGGGAAGCAGCCATaGTCATCTGCCTCAATCGAC +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHRGKQP*SSASID
Trigger: GTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHSYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS CCA 90 bp CCGGCCTGCCTGCTGCTGAGCAGCCCAGGATTCTGCAAAGCTCACTaGCCCTTGGCATTTCTTCCTATGCTGTGTCCGAGTGTAGGTAGA +
Preference number: 5 (lower is better)
Translates to: PACLLLSSPGFCKAH*PLAFLPMLCPSVGR
Trigger: TCTACCTACACTCGGACACAGCATAGGAAGAAATGCCAAGGGCCAGTGAGCTTTGCAGAATCCTGGGCTGCTCAGCAGCAGGCAGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGATGACACCCGGGCTTaGAAAGGATCATTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPADDTRA*KGSFLV
Trigger: GACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATTCATGTGGAAGTTCTaGTCCAGGGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQFMWKF*SRATTR
Trigger: GCGAGTGGTCGCCCTGGACAAGAACTTCCACATGAA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGGGGAAGCAGCCATaGTCATCTGCCTCAATCGAC +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQRGKQP*SSASID
Trigger: GTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCT...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS GCA 90 bp GGACCTAAGCCTGGATCTCGTACAGCAAGACATTTCCACCCACTCTaGCCAAACCCCCTGAGCAGTCACAGACAGGCCAGAATGACTGGG +
Preference number: 5 (lower is better)
Translates to: GPKPGSRTARHFHPL*PNPLSSHRQARMTG
Trigger: CCCAGTCATTCTGGCCTGTCTGTGACTGCTCAGGGGGTTTGGGCAGAGTGGGTGGAAATGTCTTGCTGTACGAGATCCAGGCTTAGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGCGGAAGGGATTCACTTaGGGCTTTGGGGCCACCACA +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRRKGFT*GFGATT
Trigger: TGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCG...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000643962.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKGLVLD*ELNGVA
Trigger: GGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSGLVLD*ELNGVA
Trigger: GGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQAPGLN*EATGVN
Trigger: GTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGC...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GTTGGGTCCTGGGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: VGSWVRAPGMLGRGWKWEAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...CTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACCCAGGACCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTCCCAGCCGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: LQLGSMGEGGNVLEGLPAAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...GGCTGGGAGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAACACAGTGGGGCCGGTaGGCCTGGTCCACGATGAAG +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGTQWGR*AWSTMK
Trigger: CTTCATCGTGGACCAGGCCAACCGGCCCCACTGTGT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATTCATGTGGAAGTTCTaGTCCAGGGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKFMWKF*SRATTR
Trigger: GCGAGTGGTCGCCCTGGACAAGAACTTCCACATGAA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTTTCATGTGGAAGTTCTaGTCCAGGGCGACCACTCGC +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSFMWKF*SRATTR
Trigger: GCGAGTGGTCGCCCTGGACAAGAACTTCCACATGAA...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAGGGGGAAGCAGCCATaGTCATCTGCCTCAATCGAC +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSRGKQP*SSASID
Trigger: GTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKSYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSSYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRGLVLD*ELNGVA
Trigger: GGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGACTGGACATGGAGTaGGACCTGAGGCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGGLDME*DLRLGL
Trigger: CAGCCCAAGCCTCAGGTCCAACTCCATGTCCAGTCC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSAPGLN*EATGVN
Trigger: GTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: SASEDAPCPALAAGSAAPAPGLN*EATGVN
Trigger: GTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CAA 90 bp GGTCAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: GQGTWDAREGLEMGGARHAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...ATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp GCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGTCTGATGACACCCGGGCTTaGAAAGGATCATTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AIATTWQHGGGWECPGGSDDTRA*KGSFLV
Trigger: GACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATC...AGACCCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAAGATGACACCCGGGCTTaGAAAGGATCATTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKDDTRA*KGSFLV
Trigger: GACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATC...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRAPGLN*EATGVN
Trigger: GTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGC...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS GCA 90 bp TGTCATCCAGCAGTGAGGACAGAGAGTCGATCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCTAGAGGGTCAGAGGTCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: CHPAVRTESRSPNQY*SPSPWARGSEVRAP
Trigger: AGGTGCTCTGACCTCTGACCCTCTAGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGATCGACTCTCTGTCCTCACTGCTGGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468083.1
ENST00000644791.1
CDS-3UTR CAA 90 bp TCTGCCTCTGAGGATGCTCCATGTCCTGCATTAGCTGCTGGGTCAGCTGCTCCAGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: SASEDAPCPALAAGSAAPAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...TGGAGCAGCTGACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436448.1
ENST00000644767.1
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAAGGGGGAAGCAGCCATaGTCATCTGCCTCAATCGAC +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGRGKQP*SSASID
Trigger: GTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAAGCTATAGCTACAACTaGGCAGCATGGGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGSYSYN*AAWGRV
Trigger: CACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCT...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp CAGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAATTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: QGTWDAREGLEMGGARHQLKGSF*VMSSSS
Trigger: ACTGCTGGATGACATGACCAAGAATGATCCTTTCAA...TTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAPGLN*EATGVN
Trigger: GTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS CCA 90 bp AGGACAGAGAGTCGATCTCCAAATCAATACTGCTCACCTTCTCCCTaGGCTAGAGGGTCAGAGGTCAGAGCACCTATTCCATGCCTCTAT +
Preference number: 5 (lower is better)
Translates to: RTESRSPNQYCSPSP*ARGSEVRAPIPCLY
Trigger: ATAGAGGCATGGAATAGGTGCTCTGACCTCTGACCCTCTAGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGATCGACTCTCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468083.1
ENST00000644791.1
CDS-3UTR CAA 90 bp AGGGCACCTGGGATGCTAGGGAGGGGTTGGAAATGGGAGGGGCTAGACATCAAATTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: RAPGMLGRGWKWEGLDIKLKGSF*VMSSSS
Trigger: ACTGCTGGATGACATGACCAAGAATGATCCTTTCAA...TTTGATGTCTAGCCCCTCCCATTTCCAACCCCTCCCTAGCATCCCAGGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGGTTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: CSYSYNLAAWGRVGMSWRLKGSF*VMSSSS
Trigger: ACTGCTGGATGACATGACCAAGAATGATCCTTTCAA...CCTCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGAGCCCCAATTTTTGATTaGGTTGTGACCCAGATCCAC +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGAPIFD*VVTQIH
Trigger: GTGGATCTGGGTCACAACCAAATCAAAAATTGGGGC...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000643962.1
ENST00000645637.1
ENST00000646695.2
CDS TCA 90 bp CACCCGGGCTTTGAAAGGATCATTCTTGGTCATGTCATCCAGCAGTaGGGACAGAGAGTCGATCTCCAAATCAATACTGCTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: HPGFERIILGHVIQQ*GQRVDLQINTAHLL
Trigger: GAGAAGGTGAGCAGTATTGATTTGGAGATCGACTCTCTGTCCTCACTGCTGGATGACATGACCAAGAATGATCCTTTCAAAGCCCGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000644791.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS-3UTR CAA 90 bp TTTGTAGCTATAGCTACAACTTGGCAGCATGGGGGAGGGTGGGAATGTCCTGGATTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: FVAIATTWQHGGGWECPGLKGSF*VMSSSS
Trigger: ACTGCTGGATGACATGACCAAGAATGATCCTTTCAA...TCCAGGACATTCCCACCCTCCCCCATGCTGCCAAGTTGTAGCTATAGCTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000645637.1
ENST00000646695.2
CDS TCA 90 bp GGTAGACATCAACACTATCAGTGGACTCTGGATGCTTGGACTAGATaGCCATCAGGGTCATCTTCGTCACCAGAAATTGGACGATCTTAT +
Preference number: 5 (lower is better)
Translates to: GRHQHYQWTLDAWTR*PSGSSSSPEIGRSY
Trigger: ATAAGATCGTCCAATTTCTGGTGACGAAGATGACCCTGATGGTCATCTAGTCCAAGCATCCAGAGTCCACTGATAGTGTTGATGTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS GCA 72 bp CACTGGTGGCAGGTGAAGCAGGCGATGTGGAACAGCTaGCCTAGAGCGCGGACGGCTGGCTGCGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: HWWQVKQAMWNS*PRARTAGCARA
Trigger: GGCCCGGGCGCAGCCAGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCACCTGCCACCAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000497119.1
ENST00000643962.1
ENST00000644808.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS TCA 72 bp AGAGCGCGGACGGCTGGCTGCGCCCGGGCCAGGGGTTaGTGGCATCGGCCGCAGAGTTCGTTGACAGCCACA +
Preference number: 6 (lower is better)
Translates to: RARTAGCARARG*WHRPQSSLTAT
Trigger: TGTGGCTGTCAACGAACTCTGCGGCCGATGCCATCAACCCCTGGCCCGGGCGCAGCCAGCCGTCCGCGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000497119.1
ENST00000643962.1
ENST00000644808.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS CCA 72 bp GCTGTCCCCGGGCCGGAAGGGATTCACTTTGGGCTTTaGGGCCACCACAGGGCCGAACTTCTTCTGCGGGGC +
Preference number: 6 (lower is better)
Translates to: AVPGPEGIHFGL*GHHRAELLLRG
Trigger: GCCCCGCAGAAGAAGTTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCGGCCCGGGGACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000457235.5
ENST00000468083.1
ENST00000642783.1
ENST00000643962.1
ENST00000644791.1
ENST00000646695.2
CDS CCA 72 bp TGCTGCGCACACTGGTGGCAGGTGAAGCAGGCGATGTaGAACAGCTGCCCTAGAGCGCGGACGGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: CCAHWWQVKQAM*NSCPRARTAGC
Trigger: GCAGCCAGCCGTCCGCGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCACCTGCCACCAGTGTGCGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000497119.1
ENST00000643962.1
ENST00000644808.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS CAA 72 bp CGCTGTCCCCGGGCCGGAAGGGATTCACTTTGGGCTTaGGGGCCACCACAGGGCCGAACTTCTTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: RCPRAGRDSLWA*GPPQGRTSSAG
Trigger: CCCCGCAGAAGAAGTTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCGGCCCGGGGACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000457235.5
ENST00000468083.1
ENST00000642783.1
ENST00000643962.1
ENST00000644791.1
ENST00000646695.2
CDS CAA 72 bp GGAGGCTCGCTGTCCCCGGGCCGGAAGGGATTCACTTaGGGCTTTGGGGCCACCACAGGGCCGAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: GGSLSPGRKGFT*GFGATTGPNFF
Trigger: GAAGAAGTTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCGGCCCGGGGACAGCGAGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000457235.5
ENST00000468083.1
ENST00000642783.1
ENST00000643962.1
ENST00000644791.1
ENST00000646695.2
CDS GCA 72 bp TACACTTCGGAAAACGGACCCGGAGGGGAAGATTCGTaGCCCACATTCCCGACTCCCACTCCCAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: YTSENGPGGEDS*PTFPTPTPRRG
Trigger: CCCCCGCCTGGGAGTGGGAGTCGGGAATGTGGGGCACGAATCTTCCCCTCCGGGTCCGTTTTCCGAAGTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS GCA 72 bp AGGTCAGGAAAGGCCGGGCGCACTGCCGAGGAGTGGTaGAGCTCCCGTTACACTTCGGAAAACGGACCCGGA +
Preference number: 6 (lower is better)
Translates to: RSGKAGRTAEEW*SSRYTSENGPG
Trigger: TCCGGGTCCGTTTTCCGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTTCCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS GCA 72 bp GCAGGGGAAAGTCAGGTCAGGAAAGGCCGGGCGCACTaGCGAGGAGTGGTGCAGCTCCCGTTACACTTCGGA +
Preference number: 6 (lower is better)
Translates to: AGESQVRKGRAH*RGVVQLPLHFG
Trigger: TCCGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTTCCTGACCTGACTTTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS CCA 72 bp GAGGCTCGCTGTCCCCGGGCCGGAAGGGATTCACTTTaGGCTTTGGGGCCACCACAGGGCCGAACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: EARCPRAGRDSL*ALGPPQGRTSS
Trigger: AGAAGAAGTTCGGCCCTGTGGTGGCCCCAAAGCCCAAAGTGAATCCCTTCCGGCCCGGGGACAGCGAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000457235.5
ENST00000468083.1
ENST00000642783.1
ENST00000643962.1
ENST00000644791.1
ENST00000646695.2
CDS CCA 72 bp GTCAGGTCAGGAAAGGCCGGGCGCACTGCCGAGGAGTaGTGCAGCTCCCGTTACACTTCGGAAAACGGACCC +
Preference number: 6 (lower is better)
Translates to: VRSGKAGRTAEE*CSSRYTSENGP
Trigger: GGGTCCGTTTTCCGAAGTGTAACGGGAGCTGCACCACTCCTCGGCAGTGCGCCCGGCCTTTCCTGACCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392910.6
ENST00000645637.1
CDS CCA 72 bp AAACCCCCTGAGCAGTCACAGACAGGCCAGAATGACTaGGCGGACGGAGGCCACGCACACAGCAGCTCGGGT +
Preference number: 6 (lower is better)
Translates to: KPPEQSQTGQND*ADGGHAHSSSG
Trigger: ACCCGAGCTGCTGTGTGCGTGGCCTCCGTCCGCCCAGTCATTCTGGCCTGTCTGTGACTGCTCAGGGGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS CAA 72 bp GGTGCTGTGCCCCCGGCTGCAGGCTTGGTACTGGACTaGGAACTGAATGGAGTGGCCACTGGTGGGGGCACA +
Preference number: 6 (lower is better)
Translates to: GAVPPAAGLVLD*ELNGVATGGGT
Trigger: TGTGCCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000477373.1
ENST00000643962.1
ENST00000644791.1
ENST00000645428.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS TCA 72 bp TGCCCCCGGCTGCAGGCTTGGTACTGGACTTGGAACTaGATGGAGTGGCCACTGGTGGGGGCACATATCCAG +
Preference number: 6 (lower is better)
Translates to: CPRLQAWYWTWN*MEWPLVGAHIQ
Trigger: CTGGATATGTGCCCCCACCAGTGGCCACTCCATTCAGTTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000477373.1
ENST00000643962.1
ENST00000644791.1
ENST00000645428.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS TCA 72 bp GAACCTTCCCAGGCCAGCCTACCCGGCTTCTTCCGATaGGGCTTAGCTCCCAGCTCGTGTCCCAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: EPSQASLPGFFR*GLAPSSCPRCS
Trigger: TGAGCATCTGGGACACGAGCTGGGAGCTAAGCCTCATCGGAAGAAGCCGGGTAGGCTGGCCTGGGAAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS CAA 72 bp GGCTTAGCTCCCAGCTCGTGTCCCAGATGCTCAGGCTaGACCCTTAAAGCTTCTCCCTCGTCCCCCTACCCC +
Preference number: 6 (lower is better)
Translates to: GLAPSSCPRCSG*TLKASPSSPYP
Trigger: GGGGTAGGGGGACGAGGGAGAAGCTTTAAGGGTCAAGCCTGAGCATCTGGGACACGAGCTGGGAGCTAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS TCA 72 bp CGGCCGCAGAGTTCGTTGACAGCCACATTCTGCCTCTaGGGATGCTCCATGTCCTGCATTAGCTGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RPQSSLTATFCL*GCSMSCISCWV
Trigger: GACCCAGCAGCTAATGCAGGACATGGAGCATCCTCAGAGGCAGAATGTGGCTGTCAACGAACTCTGCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000446634.1
ENST00000497119.1
ENST00000643962.1
ENST00000644808.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS GCA 72 bp GCAGTGAGGACAGAGAGTCGATCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCTGTGGTGGGGGCGGTA +
Preference number: 6 (lower is better)
Translates to: AVRTESRSPNQY*SPSPWAVVGAV
Trigger: TACCGCCCCCACCACAGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGATCGACTCTCTGTCCTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000449630.5
ENST00000457235.5
ENST00000642783.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS GCA 72 bp CCTGGATCTCGTACAGCAAGACATTTCCACCCACTCTaGCCAAACCCCCTGAGCAGTCACAGACAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PGSRTARHFHPL*PNPLSSHRQAR
Trigger: TCTGGCCTGTCTGTGACTGCTCAGGGGGTTTGGGCAGAGTGGGTGGAAATGTCTTGCTGTACGAGATCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS GCA 72 bp CTGCAATCCCAACATTTTCCTCACACTCTAGAGGGCTaGTGCCTCCAAGAACCTTCCCAGGCCAGCCTACCC +
Preference number: 6 (lower is better)
Translates to: LQSQHFPHTLEG*CLQEPSQASLP
Trigger: GGGTAGGCTGGCCTGGGAAGGTTCTTGGAGGCAGCAGCCCTCTAGAGTGTGAGGAAAATGTTGGGATTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497119.1
ENST00000644808.1
CDS CCA 72 bp CTGCTGCTGAGCAGCCCAGGATTCTGCAAAGCTCACTaGCCCTTGGCATTTCTTCCTATGCTGTGTCCGAGT +
Preference number: 6 (lower is better)
Translates to: LLLSSPGFCKAH*PLAFLPMLCPS
Trigger: ACTCGGACACAGCATAGGAAGAAATGCCAAGGGCCAGTGAGCTTTGCAGAATCCTGGGCTGCTCAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS GCA 72 bp GCAGTGAGGACAGAGAGTCGATCTCCAAATCAATACTaGTCACCTTCTCCCTGGGCTAGAGGGTCAGAGGTC +
Preference number: 6 (lower is better)
Translates to: AVRTESRSPNQY*SPSPWARGSEV
Trigger: GACCTCTGACCCTCTAGCCCAGGGAGAAGGTGAGCAGTATTGATTTGGAGATCGACTCTCTGTCCTCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468083.1
ENST00000644791.1
CDS CAA 72 bp TGTGACCCAGATCCACCTGGGGCTCCAGGACTGAACTaGGAAGCCACAGGAGTAAACTTAGGAGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: CDPDPPGAPGLN*EATGVNLGVTG
Trigger: TCCAGTGACTCCTAAGTTTACTCCTGTGGCTTCCAAGTTCAGTCCTGGAGCCCCAGGTGGATCTGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000322764.10
ENST00000354434.8
ENST00000392910.6
ENST00000436448.1
ENST00000446634.1
ENST00000468083.1
ENST00000477373.1
ENST00000643962.1
ENST00000644767.1
ENST00000644791.1
ENST00000645428.1
ENST00000645637.1
ENST00000646695.2
ENST00000647142.1
CDS CAA 72 bp CTGAGCAGCCCAGGATTCTGCAAAGCTCACTGGCCCTaGGCATTTCTTCCTATGCTGTGTCCGAGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: LSSPGFCKAHWP*AFLPMLCPSVG
Trigger: ACCTACACTCGGACACAGCATAGGAAGAAATGCCAAGGGCCAGTGAGCTTTGCAGAATCCTGGGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS CAA 72 bp ACCAGAAATTGGACGATCTTATTTCCTGAACTGGTTTaGGTTCTGAGCCGGTGGGGGCACGGGGTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: TRNWTILFPELV*VLSRWGHGVLL
Trigger: AAGCAGCACCCCGTGCCCCCACCGGCTCAGAACCAAAACCAGTTCAGGAAATAAGATCGTCCAATTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS CAA 90 bp GGGGGCACATATCCAGATGACACCCGGGCTTTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGTGAGGACAGAGAGTCGATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: GGTYPDDTRALKGSF*VMSSSSEDRESISK
Trigger: TTTGGAGATCGACTCTCTGTCCTCACTGCTGGATGACATGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATCTGGATATGTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000644791.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS TCA 72 bp CATCTTCGTCACCAGAAATTGGACGATCTTATTTCCTaGACTGGTTTTGGTTCTGAGCCGGTGGGGGCACGG +
Preference number: 6 (lower is better)
Translates to: HLRHQKLDDLIS*TGFGSEPVGAR
Trigger: CCGTGCCCCCACCGGCTCAGAACCAAAACCAGTTCAGGAAATAAGATCGTCCAATTTCTGGTGACGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS CAA 72 bp TATCCAGATGACACCCGGGCTTTGAAAGGATCATTCTaGGTCATGTCATCCAGCAGTGAGGACAGAGAGTCG +
Preference number: 6 (lower is better)
Translates to: YPDDTRALKGSF*VMSSSSEDRES
Trigger: CGACTCTCTGTCCTCACTGCTGGATGACATGACCAAGAATGATCCTTTCAAAGCCCGGGTGTCATCTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000644791.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1
CDS TCA 72 bp CAACACTATCAGTGGACTCTGGATGCTTGGACTAGATaGCCATCAGGGTCATCTTCGTCACCAGAAATTGGA +
Preference number: 6 (lower is better)
Translates to: QHYQWTLDAWTR*PSGSSSSPEIG
Trigger: TCCAATTTCTGGTGACGAAGATGACCCTGATGGTCATCTAGTCCAAGCATCCAGAGTCCACTGATAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446634.1
ENST00000647142.1
CDS TCA 72 bp TTTGAAAGGATCATTCTTGGTCATGTCATCCAGCAGTaGGGACAGAGAGTCGATCTCCAAATCAATACTGCT +
Preference number: 6 (lower is better)
Translates to: FERIILGHVIQQ*GQRVDLQINTA
Trigger: AGCAGTATTGATTTGGAGATCGACTCTCTGTCCTCACTGCTGGATGACATGACCAAGAATGATCCTTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322764.10
ENST00000392910.6
ENST00000449630.5
ENST00000468083.1
ENST00000644791.1
ENST00000645637.1
ENST00000646695.2
ENST00000647126.1