RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZYG11B (Homo sapiens)

Ensembl gene IDs: ENSG00000162378

Ensembl transcript IDs: ENST00000294353.7, ENST00000545132.5

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGTGTCAGAAATCAGGTCAACAGCTTATGTGAAGCTGCAAATTaGTTGGAAGGGACTCTGAGATCAGAAAAGTCTGGCCTAAGGGTT +
Preference number: 1 (lower is better)
Translates to: SSVRNQVNSLCEAAN*LEGTLRSEKSGLRV
Trigger: AACCCTTAGGCCAGACTTTTCTGATCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACATAAGCTGTTGACCTGATTTCTGACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 90 bp AACATCCATTATCCACAAACTCATTTGAAACTACTACCATGGATTTaGGAGGGAAACCAAAAGTTTGCAAACCTCTCTGGGAGCTGTGTC +
Preference number: 1 (lower is better)
Translates to: NIHYPQTHLKLLPWI*EGNQKFANLSGSCV
Trigger: GACACAGCTCCCAGAGAGGTTTGCAAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTTTCAAATGAGTTTGTGGATAATGGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 90 bp AATTTACAACTGAAGCAGTGTCAGAAATCAGGTCAACAGCTTATGTaGAGCTGCAAATTGATTGGAAGGGACTCTGAGATCAGAAAAGTC +
Preference number: 1 (lower is better)
Translates to: NLQLKQCQKSGQQLM*SCKLIGRDSEIRKV
Trigger: GACTTTTCTGATCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACATAAGCTGTTGACCTGATTTCTGACACTGCTTCAGTTGTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTaGCTACGACTCAATGTCCAAGCTTGTTCACCTCTGGATATTAAA +
Preference number: 1 (lower is better)
Translates to: HFKIAECKSSSREFL*LRLNVQACSPLDIK
Trigger: TTTAATATCCAGAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR GCA 90 bp ATCCACTGTATTTTAGCCAGATTCAGGACCTTACACACAATTCTGTaGCTTAATTCTATACGCAATTTTAGGAACCATCCCAACTGCAAA +
Preference number: 1 (lower is better)
Translates to: IHCILARFRTLHTIL*LNSIRNFRNHPNCK
Trigger: TTTGCAGTTGGGATGGTTCCTAAAATTGCGTATAGAATTAAGGCACAGAATTGTGTGTAAGGTCCTGAATCTGGCTAAAATACAGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 90 bp AGAGAAGAAAGGCATTTTATACAGAAGCAGTATAAAATTTACAACTaGAGCAGTGTCAGAAATCAGGTCAACAGCTTATGTGAAGCTGCA +
Preference number: 1 (lower is better)
Translates to: REERHFIQKQYKIYN*SSVRNQVNSLCEAA
Trigger: TGCAGCTTCACATAAGCTGTTGACCTGATTTCTGACACTGCTTCAGTTGTAAATTTTATACTGCTTCTGTATAAAATGCCTTTCTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTTGTCCAGGCTGGAGTaGAGTGGCACGATCTTAGCT +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSLSRLE*SGTILA
Trigger: AGCTAAGATCGTGCCACTGCACTCCAGCCTGGACAA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGCACCTCTAGCCACTaGGAGATAACACTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSTSSH*EITLKG
Trigger: GCCTTTGAGTGTTATCTCTCAGTGGCTAGAGGTGCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGCTGCAGTGAGGTATaGTTGTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGCSEV*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCATACCTCACTGCAGCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGCCCACCAATGATTTaGACAATGAGTGGTTCAACC +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSPPMI*TMSGST
Trigger: GGTTGAACCACTCATTGTTCAAATCATTGGTGGGCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTGGAGGACAAGCTTCTaGTCACCGCCTCAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRWRTSF*SPPQER
Trigger: CCTCTCTTGAGGCGGTGAGCAGAAGCTTGTCCTCCA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCCGTTTCAGATGACCTaGGCCAACTTCTGTATCAAA +
Preference number: 2 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHPFQMT*ANFCIK
Trigger: TTTGATACAGAAGTTGGCTCAGGTCATCTGAAACGG...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR TCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACAGCTGCAAAGTAACTaGCTTCCACTTCCACACTGT +
Preference number: 2 (lower is better)
Translates to: KSSSREFLWLRLNVQACSQLQSN*LPLPHC
Trigger: ACAGTGTGGAAGTGGAAGTCAGTTACTTTGCAGCTG...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCTCTGTTTCCCAGGTaGCACCACACCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRALFPR*HHTQLI
Trigger: AATTAGCTGGGTGTGGTGGCACCTGGGAAACAGAGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp AAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTTCTTTCCGTTTCAGATaGCCTGAGCCAACTTCTGTA +
Preference number: 2 (lower is better)
Translates to: KDLYATISHSGVGHFKIASFRFR*PEPTSV
Trigger: TACAGAAGTTGGCTCAGGTCATCTGAAACGGAAAGA...AGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTATAACCGGCAGTCTGTaGAGGAACCAGCAGTCCACA +
Preference number: 2 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSITGSL*RNQQST
Trigger: TGTGGACTGCTGGTTCCTGCACAGACTGCCGGTTAT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACGGCAATAATTCCAGCTaGAAAGTAACTGACTTCCAC +
Preference number: 2 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHGNNSS*KVTDFH
Trigger: GTGGAAGTCAGTTACTTTGCAGCTGGAATTATTGCC...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCAACCTCCACTTCCTaGGTTCAAGTGATTCTCGTG +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRATSTS*VQVILV
Trigger: CACGAGAATCACTTGAACCCAGGAAGTGGAGGTTGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGACTCAGAAGTATCTaGCCACTACTGATGTTTACA +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSRLRSI*PLLMFT
Trigger: TGTAAACATCAGTAGTGGCCAGATACTTCTGAGTCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGGAAGAGACCCTTCTTaGCTCATAAGTTTAAAATCA +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSGRDPS*LISLKS
Trigger: TGATTTTAAACTTATGAGTCAAGAAGGGTCTCTTCC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGAAGGGATAGGAAGATaGCCCGGTGTTATGTTGATG +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHREGIGR*PGVMLM
Trigger: CATCAACATAACACCGGGCCATCTTCCTATCCCTTC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAAATATGTGCTGTTATaGACTGCGAGTAGAATCATT +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSKYVLL*TASRII
Trigger: AATGATTCTACTCGCAGTGCATAACAGCACATATTT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGATACTGGCTACTTATaGCTCATAATTCCAATACAT +
Preference number: 2 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSDTGYL*LIIPIH
Trigger: ATGTATTGGAATTATGAGGCATAAGTAGCCAGTATC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGAGATCAGAAAAGTCTaGCCTAAGGGTTCGTGCAAA +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHREIRKV*PKGSCK
Trigger: TTTGCACGAACCCTTAGGCCAGACTTTTCTGATCTC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CCA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACAGGAGACTACTGATGTaGTCTATAAAATCTTTCCAC +
Preference number: 2 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHRRLLM*SIKSFH
Trigger: GTGGAAAGATTTTATAGACCACATCAGTAGTCTCCT...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTGTGAAGCTGCAAATTaGTTGGAAGGGACTCTGAGA +
Preference number: 2 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSCEAAN*LEGTLR
Trigger: TCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCACTACGCCCACCCTTaGTTTTACATATTTTGGATG +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRHYAHP*FYIFWM
Trigger: CATCCAAAATATGTAAAAGCAAGGGTGGGCGTAGTG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CAA 90 bp AAACATCCATTATCCACAAACTCATTTGAAACTACTACCATGGATTaGAGAGGGAAACCAAAAGTTTGCAAACCTCTCTGGGAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: KHPLSTNSFETTTMD*RGKPKVCKPLWELC
Trigger: ACACAGCTCCCAGAGAGGTTTGCAAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTTTCAAATGAGTTTGTGGATAATGGATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGGTCAACAGCTTATGTaGAGCTGCAAATTGATTGGA +
Preference number: 2 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSGQQLM*SCKLIG
Trigger: TCCAATCAATTTGCAGCTTCACATAAGCTGTTGACC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTAAAACCTATACCATaGAACCAATTCCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLKPIP*NQFPVP
Trigger: AGGAACTGGGAATTGGTTTCATGGTATAGGTTTTAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTCAAAGTTAGTATTCTaGAGCCCTAGCAATACAAAG +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSKLVF*SPSNTK
Trigger: CTTTGTATTGCTAGGGCTTCAGAATACTAACTTTGA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTGGCCTAAGGGTTCGTaGAAACTTTACCATAAAACT +
Preference number: 2 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSWPKGS*KLYHKT
Trigger: AGTTTTATGGTAAAGTTTGCACGAACCCTTAGGCCA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCTTTTTAACCTTGGGTaGAGCTGTACATTGTTCTAT +
Preference number: 2 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLFNLG*SCTLFY
Trigger: ATAGAACAATGTACAGCTGCACCCAAGGTTAAAAAG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTTATACTGTGGTGCTTaGGGAAATATTCCTAGTGAA +
Preference number: 2 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSLYCGA*GNIPSE
Trigger: TTCACTAGGAATATTTCCCCAAGCACCACAGTATAA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCCACTACGCCCACCCTaGCTTTTACATATTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSPLRPP*LLHILD
Trigger: ATCCAAAATATGTAAAAGCAAGGGTGGGCGTAGTGG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTGCAGTGGCATGATATaGGCTCACCACAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRCSGMI*AHHNLH
Trigger: GTGGAGGTTGTGGTGAGCCAATATCATGCCACTGCA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CCA 72 bp ATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTaGCTACGACTCAATGTCCAAGCTTGTTCACCTCTG +
Preference number: 3 (lower is better)
Translates to: IAECKSSSREFL*LRLNVQACSPL
Trigger: CAGAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR TCA 72 bp CTGAAGCAGTGTCAGAAATCAGGTCAACAGCTTATGTaGAGCTGCAAATTGATTGGAAGGGACTCTGAGATC +
Preference number: 3 (lower is better)
Translates to: LKQCQKSGQQLM*SCKLIGRDSEI
Trigger: GATCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACATAAGCTGTTGACCTGATTTCTGACACTGCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGGAAGAGACCCTTCTaGACTCATAAGTTTAAAATC +
Preference number: 3 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSRKRPF*THKFKI
Trigger: GATTTTAAACTTATGAGTCAAGAAGGGTCTCTTCCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTATTTAGATATTTATTaGAGTCAGCGTCTCGCTCTG +
Preference number: 3 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSYLDIY*SQRLAL
Trigger: CAGAGCGAGACGCTGACTCAAATAAATATCTAAATA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGAGCCCACCAATGATTaGAACAATGAGTGGTTCAAC +
Preference number: 3 (lower is better)
Translates to: HLKHDEQILLSYGYSHHREPTND*NNEWFN
Trigger: GTTGAACCACTCATTGTTCAAATCATTGGTGGGCTC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGGTGCAGCTGTACATaGTTCTATAGGGGTATTGTT +
Preference number: 3 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGCSCT*FYRGIV
Trigger: AACAATACCCCTATAGAACAATGTACAGCTGCACCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp AAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTTGTACTTCAGCTATATaGTTCTTTCCGTTTCAGATG +
Preference number: 3 (lower is better)
Translates to: KDLYATISHSGVGHFKIACTSAI*FFPFQM
Trigger: CATCTGAAACGGAAAGAACAATATAGCTGAAGTACA...AGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
3UTR-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAAGTTTCTTGGTGACTaGCTATCTCTCAAGTGCTAT +
Preference number: 3 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRKFLGD*LSLKCY
Trigger: ATAGCACTTGAGAGATAGCAAGTCACCAAGAAACTT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGACTACTACCATGGATTaGAGAGGGAAACCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRTTTMD*RGKPKV
Trigger: AACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp TATCCACAAACTCATTTGAAACTACTACCATGGATTTaGGAGGGAAACCAAAAGTTTGCAAACCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: YPQTHLKLLPWI*EGNQKFANLSG
Trigger: CCCAGAGAGGTTTGCAAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTTTCAAATGAGTTTGTGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CCA 72 bp AAATTGATTGGAAGGGACTCTGAGATCAGAAAAGTCTaGCCTAAGGGTTCGTGCAAACTTTACCATAAAACT +
Preference number: 3 (lower is better)
Translates to: KLIGRDSEIRKV*PKGSCKLYHKT
Trigger: AGTTTTATGGTAAAGTTTGCACGAACCCTTAGGCCAGACTTTTCTGATCTCAGAGTCCCTTCCAATCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp GGCCATAGTGAGAACAGTGCCTTCAGTCCAGATAATTaGGAGTCTTTGAAATATACACACTTTCCAATGAAT +
Preference number: 3 (lower is better)
Translates to: GHSENSAFSPDN*ESLKYTHFPMN
Trigger: ATTCATTGGAAAGTGTGTATATTTCAAAGACTCTCAATTATCTGGACTGAAGGCACTGTTCTCACTATGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp GATAACTTCTCTCACACTCATAAGTCAGTGAGAATTTaGCAGTGGGAATTCTACAAAAGTCAGGGATTTCTT +
Preference number: 3 (lower is better)
Translates to: DNFSHTHKSVRI*QWEFYKSQGFL
Trigger: AAGAAATCCCTGACTTTTGTAGAATTCCCACTGTCAAATTCTCACTGACTTATGAGTGTGAGAGAAGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp AAACAAAAGATAACTTCTCTCACACTCATAAGTCAGTaGGAATTTGACAGTGGGAATTCTACAAAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: KQKITSLTLISQ*EFDSGNSTKVR
Trigger: CCTGACTTTTGTAGAATTCCCACTGTCAAATTCTCACTGACTTATGAGTGTGAGAGAAGTTATCTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp AGGCATTTTATACAGAAGCAGTATAAAATTTACAACTaGAGCAGTGTCAGAAATCAGGTCAACAGCTTATGT +
Preference number: 3 (lower is better)
Translates to: RHFIQKQYKIYN*SSVRNQVNSLC
Trigger: ACATAAGCTGTTGACCTGATTTCTGACACTGCTTCAGTTGTAAATTTTATACTGCTTCTGTATAAAATGCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR TCA 72 bp TATGGCAAAATTTACTGGTGTCAATTGTATTTTAATTaGGAGGTTAACACCATGTTGCTGTCTCTATTCCAC +
Preference number: 3 (lower is better)
Translates to: YGKIYWCQLYFN*EVNTMLLSLFH
Trigger: GTGGAATAGAGACAGCAACATGGTGTTAACCTCTCAATTAAAATACAATTGACACCAGTAAATTTTGCCATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCATGCAGCCTCCGTCCTaGGTGCGGCGGCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTMQPPS*VRRRAG
Trigger: TCCGGCCCGCCGCCGCACCCAGGACGGAGGCTGCAT...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp AAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTCGCCTCCTCCATGGCTaGGCCGGCCTGGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KDLYATISHSGVGHFKIARLLHG*AGLVLG
Trigger: CCCGAGGACCAGGCCGGCGCAGCCATGGAGGAGGCG...AGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCATGGCTGCGCCGGCCTaGTCCTCGGGCATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSMAAPA*SSGMQP
Trigger: AGGCTGCATGCCCGAGGACCAGGCCGGCGCAGCCAT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGAGACGCCTCCTCCATaGCTGCGCCGGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSETPPP*LRRPGP
Trigger: AGGACCAGGCCGGCGCAGCCATGGAGGAGGCGTCTC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATCGGCGGCTCCGGGCTTaGCCCAGGCCTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KNGLKDLYATISHSGVGHRRLRA*PRPRPL
Trigger: AAGAGGCCGAGGCCTGGGCCAAGCCCGGAGCCGCCG...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGATGCAGCCTCCGTCCTaGGTGCGGCGGCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRMQPPS*VRRRAG
Trigger: TCCGGCCCGCCGCCGCACCCAGGACGGAGGCTGCAT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCAGAGACGCCTCCTCCATaGCTGCGCCGGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPETPPP*LRRPGP
Trigger: AGGACCAGGCCGGCGCAGCCATGGAGGAGGCGTCTC...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCGCCTCCTCCATGGCTaGGCCGGCCTGGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRLLHG*AGLVLG
Trigger: CCCGAGGACCAGGCCGGCGCAGCCATGGAGGAGGCG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCGGCGGCTCCGGGCTTaGCCCAGGCCTCGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRRLRA*PRPRPL
Trigger: AAGAGGCCGAGGCCTGGGCCAAGCCCGGAGCCGCCG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCCTGGTCCTCGGGCATaGAGCCTCCGTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRPGPRA*SLRPGC
Trigger: GCACCCAGGACGGAGGCTGCATGCCCGAGGACCAGG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCAGGCCAGAAAGCCGGCTaGAGCAGCGCTCGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: KSSSREFLWLRLNVQACSGQKAG*SSARKD
Trigger: ATCCTTACGAGCGCTGCTTCAGCCGGCTTTCTGGCC...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCCCAAGAGGCTGCAGTaGGGTATGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSPKRLQ*GMIVPL
Trigger: CAGTGGCACAATCATACCTCACTGCAGCCTCTTGGG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTCGGACAGGCATCCCTaGAGCAAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSDRHP*SKILLG
Trigger: ACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTGGAGGACAAGCTTCTaGTCACCGCCTCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSWRTSF*SPPQER
Trigger: CCTCTCTTGAGGCGGTGAGCAGAAGCTTGTCCTCCA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCGCATGGTTAGAGACTTaGGTCGGTCTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTAWLET*VGLCRP
Trigger: TGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGC...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGCGCTTGCAGCCAGTTaGACTGGCAAATTCATAGGG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSALAAS*TGKFIG
Trigger: CCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCTGCAGACATGTTGCATaGCCCAAACTGCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLCRHVA*PKLPIA
Trigger: AGCTATGGGCAGTTTGGGCCATGCAACATGTCTGCA...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGGAGGTGGCCTCCCATaGCGCACAATGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSGGGLP*RTMCFS
Trigger: AGAAAAACACATTGTGCGCCATGGGAGGCCACCTCC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGCCAGAAAGCCGGCTaGAGCAGCGCTCGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGQKAG*SSARKD
Trigger: ATCCTTACGAGCGCTGCTTCAGCCGGCTTTCTGGCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCACCTGGTCCTCGGGCATaGAGCCTCCGTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSPGPRA*SLRPGC
Trigger: GCACCCAGGACGGAGGCTGCATGCCCGAGGACCAGG...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTAAATACACAGGCGCTTaGAGCCAGTTGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPKYTGA*SQLHWQ
Trigger: TTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTT...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCCGCTTTAAGCGCATCTaGTTGCCCCTAAAAATACCC +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLRFKRI*LPLKIP
Trigger: GGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCG...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTTCAGCACCAGGCACTaGAGATTCTGCTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSFSTRH*RFCWIH
Trigger: ATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTTTGGGAAGCTGAGGTaGGAAAGTCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSFGKLR*ESHLRP
Trigger: TGGCCTCAAGTGACTTTCCCACCTCAGCTTCCCAAA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTCCATCTTGTCTGGCTaGACAGAACTTCTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSILSG*TELLKV
Trigger: CACCTTGAGAAGTTCTGTTCAGCCAGACAAGATGGA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAATGTCCTTCGCCTGTaGGGAATTCAGAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSNVLRL*GIQSNQ
Trigger: CTGGTTACTCTGAATTCCTCACAGGCGAAGGACATT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCAATGTCCTTCGCCTGTaGGGAATTCAGAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTNVLRL*GIQSNQ
Trigger: CTGGTTACTCTGAATTCCTCACAGGCGAAGGACATT...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTAGTGCTTCTGCAATCTaGGTTTCATTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPSASAI*VSLASP
Trigger: TGGGGAAGCCAATGAAACTCAGATTGCAGAAGCACT...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCCTAGAACTTTCTGCTaGATGGATGACTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSPRTFC*MDDSVG
Trigger: CCCAACTGAGTCATCCATTCAGCAGAAAGTTCTAGG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCAGCTGCAAAGTAACTaGCTTCCACTTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPQLQSN*LPLPHC
Trigger: ACAGTGTGGAAGTGGAAGTCAGTTACTTTGCAGCTG...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGAACTCCTGGTGTTGTaGAACAGCCAAGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSELLVL*NSQVMG
Trigger: TCCCATTACTTGGCTGTTTCACAACACCAGGAGTTC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCTCTTTCCGTTTCAGATaGCCTGAGCCAACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLSFRFR*PEPTSV
Trigger: TACAGAAGTTGGCTCAGGTCATCTGAAACGGAAAGA...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTCTTTGCTTTGCGAATaGAGGCTCGCTTTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSLLCE*RLALSA
Trigger: TGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCCAGAGATCTTTGCTTTaGGAATGCAGGCTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLQRSLL*ECRLAL
Trigger: TAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTG...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAGCGCTTGCAGCCAGTTaGACTGGCAAATTCATAGGG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKALAAS*TGKFIG
Trigger: CCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGC...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTCGGACAGGCATCCCTaGAGCAAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KNGLKDLYATISHSGVGHSDRHP*SKILLG
Trigger: ACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGA...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCGGCAAATTCATAGGGTaGTTTCTCATCCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLGKFIG*FLIPVT
Trigger: GGTTACTGGGATGAGAAACCACCCTATGAATTTGCC...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCAGCAGAGAATTCCTCTaGCTACGACTCAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLSREFL*LRLNVQ
Trigger: TTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCT...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAATGTTCCATGGCTTTaGGCAGCAAATGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSNVPWL*AANGSH
Trigger: ATGTGACCCATTTGCTGCTCAAAGCCATGGAACATT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAACCGGTCACTGCAAAGTaGAAGGAGGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKPVTAK*KEAILL
Trigger: CAGAAGAATTGCCTCCTTTCACTTTGCAGTGACCGG...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTGTGAAGCTGCAAATTaGTTGGAAGGGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSCEAAN*LEGTLR
Trigger: TCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGTGGTCTCGAACTCCTaGTCTCAAGTGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRVVSNS*SQVICP
Trigger: CGGGCAGATCACTTGAGATCAGGAGTTCGAGACCAC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTGCTTTATCTGTCACGTaGTTTCTCCCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPALSVT*FLPETS
Trigger: GGATGTTTCTGGGAGAAAGCACGTGACAGATAAAGC...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCACGCTTCAGTGCTTCTaGAATCTGAGTTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTTLQCF*NLSFIG
Trigger: GCCAATGAAACTCAGATTGCAGAAGCACTGAAGCGT...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTTTCCCGAACAAAGAATaGCCGTTCACTGTAACGCTT +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPFPNKE*PFTVTL
Trigger: AAGCGTTACAGTGAACGGGCATTCTTTGTTCGGGAA...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATGGTTGCAAAGCCACTaGATGACAAGCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKWLQSH*MTSLAA
Trigger: AGCAGCCAAGCTTGTCATGCAGTGGCTTTGCAACCA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCAGCATTCACACCTGTaGCATCAAGTTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSQHSHL*HQVPLT
Trigger: AGTTAGTGGAACTTGATGCCACAGGTGTGAATGCTG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCACTGGAGATTCTGCTaGATCCATTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSHWRFC*IHLLLP
Trigger: TGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATTCAGCACCAGGCACTaGAGATTCTGCTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKFSTRH*RFCWIH
Trigger: ATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGCAGAGAATTCCTCTaGCTACGACTCAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSREFL*LRLNVQ
Trigger: TTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGAGATCAGAAAAGTCTaGCCTAAGGGTTCGTGCAAA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSEIRKV*PKGSCK
Trigger: TTTGCACGAACCCTTAGGCCAGACTTTTCTGATCTC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATCCATCTTGTCTGGCTaGACAGAACTTCTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKSILSG*TELLKV
Trigger: CACCTTGAGAAGTTCTGTTCAGCCAGACAAGATGGA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCATGGTTAGAGACTTaGGTCGGTCTTTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRAWLET*VGLCRP
Trigger: TGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGATGATTCAGATGTTTaGGTTCCCGAACTACATCCA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSDDSDV*VPELHP
Trigger: TGGATGTAGTTCGGGAACTCAAACATCTGAATCATC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAACCTAGAACTTTCTGCTaGATGGATGACTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKPRTFC*MDDSVG
Trigger: CCCAACTGAGTCATCCATTCAGCAGAAAGTTCTAGG...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATCTTTGCTTTGCGAATaGAGGCTCGCTTTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKSLLCE*RLALSA
Trigger: TGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCAGAAGGATCCGGTCACTaGAAAGTGAAAGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPEGSGH*KVKGGN
Trigger: ATTGCCTCCTTTCACTTTGCAGTGACCGGATCCTTC...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTATTAAAGGACCTGTATaGTACCATCTCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: SSSREFLWLRLNVQACSPIKGPV*YHLTLW
Trigger: CCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAAT...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGATAACCGGCAGTCTGTaGAGGAACCAGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRITGSL*RNQQST
Trigger: TGTGGACTGCTGGTTCCTGCACAGACTGCCGGTTAT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTGTCCAGGCTGGAGTaGAGTGGCACGATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLSRLE*SGTILA
Trigger: AGCTAAGATCGTGCCACTGCACTCCAGCCTGGACAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCAACATACGATTCTTGCTaGAGACATGTTGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPTYDSC*RHVAWP
Trigger: GGGCCATGCAACATGTCTGCAGCAAGAATCGTATGT...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATGACCATGAAAAGCCATaGTCCGAAGCAGTCGATCAG +
Preference number: 4 (lower is better)
Translates to: KNGLKDLYATISHSGVGHDHEKP*SEAVDQ
Trigger: CTGATCGACTGCTTCGGACCATGGCTTTTCATGGTC...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAAGTTCCACTAACTTGTaGTGGCAGAAAGCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKSSTNL*WQKAFR
Trigger: CCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACT...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATGCTTTGAGCAGCAAATaGGTCACATCAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KNGLKDLYATISHSGVGHALSSK*VTSARS
Trigger: ACTCCTGGCTGATGTGACCCATTTGCTGCTCAAAGC...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCAAATGTTCCATGGCTTTaGGCAGCAAATGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPNVPWL*AANGSH
Trigger: ATGTGACCCATTTGCTGCTCAAAGCCATGGAACATT...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGATGCAAAGCCACTGCATaGCAAGCTTGGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRCKATA*QAWLLQ
Trigger: TTGAAGCAGCCAAGCTTGTCATGCAGTGGCTTTGCA...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGTATCTGGCCACTACTaGTGTTTACAAAGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSVSGHY*CLQSRK
Trigger: TTTCCTACTTTGTAAACATCAGTAGTGGCCAGATAC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCAGCAAACCTACAAATTaGATGCTTGGACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTSKPTN*MLGRCC
Trigger: ACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCT...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAAATACACAGGCGCTTaGAGCCAGTTGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRKYTGA*SQLHWQ
Trigger: TTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTGGTTGCAAAGCCACTaGATGACAAGCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRWLQSH*MTSLAA
Trigger: AGCAGCCAAGCTTGTCATGCAGTGGCTTTGCAACCA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCTTCTTCAATCAGCATaGTGCAATACCTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSLLQSA*CNTLKD
Trigger: ATCCTTCAAGGTATTGCAGCATGCTGATTGAAGAAG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGCTCTGTTTCCCAGGTaGCACCACACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSALFPR*HHTQLI
Trigger: AATTAGCTGGGTGTGGTGGCACCTGGGAAACAGAGC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp AAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTTCCACTAACTTGTGGTaGCAGAAAGCTTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: KDLYATISHSGVGHFKIASTNLW*QKAFRK
Trigger: TTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGA...AGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACAGCATTCACACCTGTaGCATCAAGTTCCACTAACT +
Preference number: 4 (lower is better)
Translates to: KSSSREFLWLRLNVQACSQHSHL*HQVPLT
Trigger: AGTTAGTGGAACTTGATGCCACAGGTGTGAATGCTG...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp AAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTCACTGGAGATTCTGCTaGATCCATTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: KDLYATISHSGVGHFKIAHWRFC*IHLLLP
Trigger: TGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTG...AGCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCCTCTGGATATTAAATaGGCAATAATTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSPLDIK*AIIPAA
Trigger: TGCAGCTGGAATTATTGCCCATTTAATATCCAGAGG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTACCATCTCACACTCTaGAGTTGGCCATTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSYHLTL*SWPFQN
Trigger: ATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTGCAGACATGTTGCATaGCCCAAACTGCCCATAGCT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRCRHVA*PKLPIA
Trigger: AGCTATGGGCAGTTTGGGCCATGCAACATGTCTGCA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp AAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCGATGATTCAGATGTTTaGGTTCCCGAACTACATCCA +
Preference number: 4 (lower is better)
Translates to: KGPVCYHLTLWSWPFQNSDDSDV*VPELHP
Trigger: TGGATGTAGTTCGGGAACTCAAACATCTGAATCATC...GCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGTGCTTCTGCAATCTaGGTTTCATTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSASAI*VSLASP
Trigger: TGGGGAAGCCAATGAAACTCAGATTGCAGAAGCACT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATTCTGTAACTGCTGGTaGTTGGGAAAATGTTCCATG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKFCNCW*LGKCSM
Trigger: CATGGAACATTTTCCCAATCACCAGCAGTTACAGAA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCCGGTCACTGCAAAGTaGAAGGAGGCAATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSPVTAK*KEAILL
Trigger: CAGAAGAATTGCCTCCTTTCACTTTGCAGTGACCGG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCATTAAATGGAACATCTTaGAGGATCCGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KSSSREFLWLRLNVQACSLNGTS*RIRSLQ
Trigger: TTGCAGTGACCGGATCCTTCAAGATGTTCCATTTAA...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTGCAAAGCCACTGCATaGCAAGCTTGGCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSCKATA*QAWLLQ
Trigger: TTGAAGCAGCCAAGCTTGTCATGCAGTGGCTTTGCA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTTAAAACCTATACCATaGAACCAATTCCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSLKPIP*NQFPVP
Trigger: AGGAACTGGGAATTGGTTTCATGGTATAGGTTTTAA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTCAAAGTTAGTATTCTaGAGCCCTAGCAATACAAAG +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSKLVF*SPSNTK
Trigger: CTTTGTATTGCTAGGGCTTCAGAATACTAACTTTGA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp AAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCACTGTAACGCTTCAGTaGTTCTGCAATCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KGPVCYHLTLWSWPFQNSTVTLQ*FCNLSF
Trigger: GAAACTCAGATTGCAGAAGCACTGAAGCGTTACAGT...GCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCCTGCAGCAAGATCCTaGTTGGTTAAGTTAAATACA +
Preference number: 4 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHPAARS*LVKLNT
Trigger: TGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGG...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGAAGGATCCGGTCACTaGAAAGTGAAAGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHREGSGH*KVKGGN
Trigger: ATTGCCTCCTTTCACTTTGCAGTGACCGGATCCTTC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCAGAAATGATAGCAACTaGCATCCTTTGCATGTTTTG +
Preference number: 4 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTRNDSN*HPLHVL
Trigger: CAAAACATGCAAAGGATGGCAGTTGCTATCATTTCT...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACTCAGTACCAAGCTGTaGAGTTTGTTCTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: KSSSREFLWLRLNVQACSLSTKL*SLFCRK
Trigger: CTTTCTACAGAACAAACTGCACAGCTTGGTACTGAG...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTCTGTCAAAAATATGTaGTGTTATGCACTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSVKNM*CYALRV
Trigger: TACTCGCAGTGCATAACAGCACATATTTTTGACAGA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGTTTCTTGGTGACTTaGTATCTCTCAAGTGCTATT +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSSFLVT*YLSSAI
Trigger: AATAGCACTTGAGAGATAGCAAGTCACCAAGAAACT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGGAAACCAAAAGTTTaGAAACCTCTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGKPKV*KPLWEL
Trigger: CAGCTCCCAGAGAGGTTTGCAAACTTTTGGTTTCCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTGTAAAGTTAGGCTGTaGTATCCAAAAGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSCKVRL*YPKELY
Trigger: GTAAAGCTCTTTTGGATAGCACAGCCTAACTTTACA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGACCATGAAAAGCCATaGTCCGAAGCAGTCGATCAG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSDHEKP*SEAVDQ
Trigger: CTGATCGACTGCTTCGGACCATGGCTTTTCATGGTC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCGCTTTAAGCGCATCTaGTTGCCCCTAAAAATACCC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRRFKRI*LPLKIP
Trigger: GGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGCTTTGAGCAGCAAATaGGTCACATCAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSALSSK*VTSARS
Trigger: ACTCCTGGCTGATGTGACCCATTTGCTGCTCAAAGC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCAGGAGACTACTGATGTaGTCTATAAAATCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSRRLLM*SIKSFH
Trigger: GTGGAAAGATTTTATAGACCACATCAGTAGTCTCCT...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCCACAGCAATCTGTTaGACATGGGGATCAGTATGT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRATAIC*TWGSVC
Trigger: ACATACTGATCCCCATGTCCAACAGATTGCTGTGGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGCAACCTCCACTTCCTaGGTTCAAGTGATTCTCGTG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSATSTS*VQVILV
Trigger: CACGAGAATCACTTGAACCCAGGAAGTGGAGGTTGC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTCATTCAATAGACCATaGAAAGCCATGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSFNRP*KAMVRS
Trigger: GCTTCGGACCATGGCTTTTCATGGTCTATTGAATGA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAGCTGCAAAGTAACTaGCTTCCACTTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQLQSN*LPLPHC
Trigger: ACAGTGTGGAAGTGGAAGTCAGTTACTTTGCAGCTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAAACTGCCCATAGCTaGACTCCTGGTGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQTAHS*TPGVVK
Trigger: TTTCACAACACCAGGAGTTCAGCTATGGGCAGTTTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGACCGTTTCAGATGACCTaGGCCAACTTCTGTATCAAA +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRPFQMT*ANFCIK
Trigger: TTTGATACAGAAGTTGGCTCAGGTCATCTGAAACGG...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCAGAGATCTTTGCTTTaGGAATGCAGGCTCGCTTTA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRQRSLL*ECRLAL
Trigger: TAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAACAGCAGAGATCTTTaGTTTGCGAATGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSNSRDL*FANAGS
Trigger: CGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGGCACTGGAGATTCTaGTGGATCCATTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRRHWRF*WIHLLL
Trigger: CAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGAAGGCACTGGAGATTCTaGTGGATCCATTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRRHWRF*WIHLLL
Trigger: CAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCT...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCTTTATCTGTCACGTaGTTTCTCCCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRALSVT*FLPETS
Trigger: GGATGTTTCTGGGAGAAAGCACGTGACAGATAAAGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGACGCTTCAGTGCTTCTaGAATCTGAGTTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRTLQCF*NLSFIG
Trigger: GCCAATGAAACTCAGATTGCAGAAGCACTGAAGCGT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTCCACTAACTTGTGGTaGCAGAAAGCTTTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSTNLW*QKAFRK
Trigger: TTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAGTTCCACTAACTTGTaGTGGCAGAAAGCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSSSTNL*WQKAFR
Trigger: CCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTGCAGCCAGTTGCACTaGCAAATTCATAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSCSQLH*QIHRVV
Trigger: AACCACCCTATGAATTTGCCAGTGCAACTGGCTGCA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCACCTCTGGATATTAAATaGGCAATAATTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPPLDIK*AIIPAA
Trigger: TGCAGCTGGAATTATTGCCCATTTAATATCCAGAGG...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATACCATCTCACACTCTaGAGTTGGCCATTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPYHLTL*SWPFQN
Trigger: ATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTA...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGAAGGGATAGGAAGATaGCCCGGTGTTATGTTGATG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSEGIGR*PGVMLM
Trigger: CATCAACATAACACCGGGCCATCTTCCTATCCCTTC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CAA 72 bp AACTACTACCATGGATTTGAGAGGGAAACCAAAAGTTaGCAAACCTCTCTGGGAGCTGTGTCAAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: NYYHGFERETKS*QTSLGAVSKLV
Trigger: TACTAACTTTGACACAGCTCCCAGAGAGGTTTGCAAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCAAGTGATGTCTGTGATTaGGGTGTTAGAAATATCCAA +
Preference number: 4 (lower is better)
Translates to: KSSSREFLWLRLNVQACSSDVCD*GVRNIQ
Trigger: TTGGATATTTCTAACACCTCAATCACAGACATCACT...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATCTGAGATATCAAGATaGTTCAGATGTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKSEISR*FRCLSS
Trigger: GGAACTCAAACATCTGAATCATCTTGATATCTCAGA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCACAATGTAGTGTCCACTaGATTTTGATTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPQCSVH*ILIGFL
Trigger: CAGAAAACCAATCAAAATTCAGTGGACACTACATTG...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGTCAACAGCTTATGTaGAGCTGCAAATTGATTGGA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGQQLM*SCKLIG
Trigger: TCCAATCAATTTGCAGCTTCACATAAGCTGTTGACC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCATGAGAAGCAGCACTaGTCTTTGCAAAACTTACCC +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSHEKQH*SLQNLP
Trigger: GGGTAAGTTTTGCAAAGATCAGTGCTGCTTCTCATG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAATACTCCAGGTTCCTaGAGACACAATGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRNTPGS*RHNVPS
Trigger: AGATGGAACATTGTGTCTGCAGGAACCTGGAGTATT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGACTGTAACGCTTCAGTaGTTCTGCAATCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRTVTLQ*FCNLSF
Trigger: GAAACTCAGATTGCAGAAGCACTGAAGCGTTACAGT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTTCCCGAACAAAGAATaGCCGTTCACTGTAACGCTT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSFPNKE*PFTVTL
Trigger: AAGCGTTACAGTGAACGGGCATTCTTTGTTCGGGAA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCATGACAAGCTTGGCTaGTTCAAACCTGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRHDKLG*FKPVKW
Trigger: CCATTTAACAGGTTTGAAGCAGCCAAGCTTGTCATG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGACATGACAAGCTTGGCTaGTTCAAACCTGTTAAATGG +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRHDKLG*FKPVKW
Trigger: CCATTTAACAGGTTTGAAGCAGCCAAGCTTGTCATG...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCTCAGTACCAAGCTGTaGAGTTTGTTCTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLSTKL*SLFCRK
Trigger: CTTTCTACAGAACAAACTGCACAGCTTGGTACTGAG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGCAATAATTCCAGCTaGAAAGTAACTGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGNNSS*KVTDFH
Trigger: GTGGAAGTCAGTTACTTTGCAGCTGGAATTATTGCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGAGGCAATAATTCCAGCTaGAAAGTAACTGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRGNNSS*KVTDFH
Trigger: GTGGAAGTCAGTTACTTTGCAGCTGGAATTATTGCC...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAATCTGAGTTTCATTaGCTTCCCCAGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQSEFH*LPQTPS
Trigger: TGAAGGTGTCTGGGGAAGCCAATGAAACTCAGATTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGGCAAATTCATAGGGTaGTTTCTCATCCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSGKFIG*FLIPVT
Trigger: GGTTACTGGGATGAGAAACCACCCTATGAATTTGCC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAATTCAAACCTGTTAAATaGAACATCTTGAAGGATCCG +
Preference number: 4 (lower is better)
Translates to: GLKDLYATISHSGVGHFKFKPVK*NILKDP
Trigger: CGGATCCTTCAAGATGTTCCATTTAACAGGTTTGAA...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGTGTCTACAAGTGGTTaGAGATTCATCTGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRVSTSG*RFICEV
Trigger: AACCTCACAGATGAATCTCCAACCACTTGTAGACAC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGAGTCAGACTAAAAAGATaGAATAGAGCTTCCCGAACA +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRVRLKR*NRASRT
Trigger: TGTTCGGGAAGCTCTATTTCATCTTTTTAGTCTGAC...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTTCTGTAACTGCTGGTaGTTGGGAAAATGTTCCATG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSFCNCW*LGKCSM
Trigger: CATGGAACATTTTCCCAATCACCAGCAGTTACAGAA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTTAAATGGAACATCTTaGAGGATCCGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSLNGTS*RIRSLQ
Trigger: TTGCAGTGACCGGATCCTTCAAGATGTTCCATTTAA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTCTGCTTCACTATTTaGAGAAGTTGCCTGACAATG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRFCFTI*RSCLTM
Trigger: CATTGTCAGGCAACTTCTTCAAATAGTGAAGCAGAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCAGAACTCCTGGTGTTGTaGAACAGCCAAGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSELLVL*NSQVMG
Trigger: TCCCATTACTTGGCTGTTTCACAACACCAGGAGTTC...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCACAAACTGCCCATAGCTaGACTCCTGGTGTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSQTAHS*TPGVVK
Trigger: TTTCACAACACCAGGAGTTCAGCTATGGGCAGTTTG...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTTATACTCAATTCCTaGAACTGGGGGTCTGATATG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRFILNS*NWGSDM
Trigger: CATATCAGACCCCCAGTTTCAGGAATTGAGTATAAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCTACTACCATGGATTTaGGAGGGAAACCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLLPWI*EGNQKF
Trigger: AAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGACACTCATAAGTCAGTaGGAATTTGACAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRTLISQ*EFDSGN
Trigger: ATTCCCACTGTCAAATTCTCACTGACTTATGAGTGT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCAAACAGCAGAGATCTTTaGTTTGCGAATGCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSNSRDL*FANAGS
Trigger: CGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTT...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGCAAACCTACAAATTaGATGCTTGGACGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSKPTN*MLGRCC
Trigger: ACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCCTGCAGCAAGATCCTaGTTGGTTAAGTTAAATACA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRPAARS*LVKLNT
Trigger: TGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp GAAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTCAAAATAGCTGAATaGAAATCATCCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: EKWIKGPVCYHLTLWSWPFKIAE*KSSSRE
Trigger: TTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAA...TGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTATTAAAGGACCTGTATaGTACCATCTCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSIKGPV*YHLTLW
Trigger: CCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAAT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCTTCAATCAGCATGCTaGAATACCTTGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLQSAC*NTLKDS
Trigger: AGAATCCTTCAAGGTATTGCAGCATGCTGATTGAAG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGAATGTTCCATCTTGTCTaGCTGAACAGAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRMFHLV*LNRTSQ
Trigger: TTGAGAAGTTCTGTTCAGCCAGACAAGATGGAACAT...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATGCAGCCAGTTGCACTaGCAAATTCATAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSCSQLH*QIHRVV
Trigger: AACCACCCTATGAATTTGCCAGTGCAACTGGCTGCA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAGAACTTCTCAAGGTaGGTAGTCAAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQNFSR*VVKKFK
Trigger: CTTGAATTTCTTGACTACTCACCTTGAGAAGTTCTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGTGATGTCTGTGATTaGGGTGTTAGAAATATCCAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSDVCD*GVRNIQ
Trigger: TTGGATATTTCTAACACCTCAATCACAGACATCACT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGTCAGACTAAAAAGATaGAATAGAGCTTCCCGAACA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSVRLKR*NRASRT
Trigger: TGTTCGGGAAGCTCTATTTCATCTTTTTAGTCTGAC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGCAATGTAGTGTCCACTaGATTTTGATTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRQCSVH*ILIGFL
Trigger: CAGAAAACCAATCAAAATTCAGTGGACACTACATTG...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGATTACTGTCCCAGGGTaGCAAGAAGCAATATTTATA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRITVPG*QEAIFI
Trigger: TATAAATATTGCTTCTTGTCACCCTGGGACAGTAAT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAAGTCAGTGAGAATTTaGCAGTGGGAATTCTACAAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRKSVRI*QWEFYK
Trigger: TTTGTAGAATTCCCACTGTCAAATTCTCACTGACTT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAAACATTTCAAGTGGTaGATGGTTAGAGACTTGAGT +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRKHFKW*MVRDLS
Trigger: ACTCAAGTCTCTAACCATGCACCACTTGAAATGTTT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGAAAACATTTCAAGTGGTaGATGGTTAGAGACTTGAGT +
Preference number: 4 (lower is better)
Translates to: HFKIAECKSSSREFLWLRKHFKW*MVRDLS
Trigger: ACTCAAGTCTCTAACCATGCACCACTTGAAATGTTT...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAGGTTAACACCATGTTaGTGTCTCTATTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRLTPC*CLYSTE
Trigger: TTCAGTGGAATAGAGACAGCAACATGGTGTTAACCT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAGGAACCATCCCAACTaGAAAGGCACTCAAATTTTT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRNHPN*KGTQIF
Trigger: AAAAATTTGAGTGCCTTTGCAGTTGGGATGGTTCCT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTATGTTCCATCTTGTCTaGCTGAACAGAACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSMFHLV*LNRTSQ
Trigger: TTGAGAAGTTCTGTTCAGCCAGACAAGATGGAACAT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCACAATCTGAGTTTCATTaGCTTCCCCAGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSQSEFH*LPQTPS
Trigger: TGAAGGTGTCTGGGGAAGCCAATGAAACTCAGATTG...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTCAAACCTGTTAAATaGAACATCTTGAAGGATCCG +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRFKPVK*NILKDP
Trigger: CGGATCCTTCAAGATGTTCCATTTAACAGGTTTGAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTATACTGTGGTGCTTaGGGAAATATTCCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLYCGA*GNIPSE
Trigger: TTCACTAGGAATATTTCCCCAAGCACCACAGTATAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAGACTCAGAAGTATCTaGCCACTACTGATGTTTACA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRLRSI*PLLMFT
Trigger: TGTAAACATCAGTAGTGGCCAGATACTTCTGAGTCT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTCACCGGACGAAGGTTaGTTTTGCATTATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSSPDEG*FCIIPK
Trigger: TTTAGGAATAATGCAAAACCAACCTTCGTCCGGTGA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
3UTR CAA 72 bp TTATCCACAAACTCATTTGAAACTACTACCATGGATTaGAGAGGGAAACCAAAAGTTTGCAAACCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSTNSFETTTMD*RGKPKVCKPLW
Trigger: CCAGAGAGGTTTGCAAACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTTTCAAATGAGTTTGTGGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTCTGAGATATCAAGATaGTTCAGATGTTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSSEISR*FRCLSS
Trigger: GGAACTCAAACATCTGAATCATCTTGATATCTCAGA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTAGAAATGATAGCAACTaGCATCCTTTGCATGTTTTG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSRNDSN*HPLHVL
Trigger: CAAAACATGCAAAGGATGGCAGTTGCTATCATTTCT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTCAAAATAGCTGAATaGAAATCATCCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRFKIAE*KSSSRE
Trigger: TTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGATGTTGTATAAATGCTaGAATCCTCCTTCTTCAATC +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRMLYKC*NPPSSI
Trigger: GATTGAAGAAGGAGGATTGCAGCATTTATACAACAT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR GCA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTGATGTTGTATAAATaGTGCAATCCTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLMLYK*CNPPSS
Trigger: TGAAGAAGGAGGATTGCAGCATTTATACAACATCAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTACAAATTGCATGCTTaGACGTTGTTGTATAAAGGC +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSYKLHA*TLLYKG
Trigger: GCCTTTATACAACAACGTCCAAGCATGCAATTTGTA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCAGTGTCTACAAGTGGTTaGAGATTCATCTGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSVSTSG*RFICEV
Trigger: AACCTCACAGATGAATCTCCAACCACTTGTAGACAC...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAACACTACAACATATaGAGATGTAGACAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQHYNI*RCRQLV
Trigger: GACTAACTGTCTACATCTCCATATGTTGTAGTGTTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR TCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCACAGAACTTCTCAAGGTaGGTAGTCAAGAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSQNFSR*VVKKFK
Trigger: CTTGAATTTCTTGACTACTCACCTTGAGAAGTTCTG...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR TCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATTCTGCTTCACTATTTaGAGAAGTTGCCTGACAATG +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSFCFTI*RSCLTM
Trigger: CATTGTCAGGCAACTTCTTCAAATAGTGAAGCAGAA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR GCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGATACTGGCTACTTATaGCTCATAATTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSDTGYL*LIIPIH
Trigger: ATGTATTGGAATTATGAGGCATAAGTAGCCAGTATC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTTTAAACATTTCAAGTaGTGCATGGTTAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSFKHFK*CMVRDL
Trigger: CAAGTCTCTAACCATGCACCACTTGAAATGTTTAAA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGATTTGAACAATGAGTaGTTCAACCCTAGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSDLNNE*FNPSLN
Trigger: ATTTAGACTAGGGTTGAACCACTCATTGTTCAAATC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATACAAATTGCATGCTTaGACGTTGTTGTATAAAGGC +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSYKLHA*TLLYKG
Trigger: GCCTTTATACAACAACGTCCAAGCATGCAATTTGTA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CCA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATTTAAACATTTCAAGTaGTGCATGGTTAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSFKHFK*CMVRDL
Trigger: CAAGTCTCTAACCATGCACCACTTGAAATGTTTAAA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS CCA 90 bp TCCATGGCTGCGCCGGCCTGGTCCTCGGGCATGCAGCCTCCGTCCTaGGTGCGGCGGCGGGCCGGACCGGAGCCCGCCCCCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SMAAPAWSSGMQPPS*VRRRAGPEPAPRLS
Trigger: GCTCAGCCTGGGGGCGGGCTCCGGTCCGGCCCGCCGCCGCACCCAGGACGGAGGCTGCATGCCCGAGGACCAGGCCGGCGCAGCCATGGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 90 bp AGGGAGACGCCTCCTCCATGGCTGCGCCGGCCTGGTCCTCGGGCATaGAGCCTCCGTCCTGGGTGCGGCGGCGGGCCGGACCGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RETPPPWLRRPGPRA*SLRPGCGGGPDRSP
Trigger: CGGGCTCCGGTCCGGCCCGCCGCCGCACCCAGGACGGAGGCTGCATGCCCGAGGACCAGGCCGGCGCAGCCATGGAGGAGGCGTCTCCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 90 bp GTCACATCAGCCAGGAGTCGGACAGGCATCCCTGCAGCAAGATCCTaGTTGGTTAAGTTAAATACACAGGCGCTTGCAGCCAGTTGCACT +
Preference number: 5 (lower is better)
Translates to: VTSARSRTGIPAARS*LVKLNTQALAASCT
Trigger: AGTGCAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGACTCCTGGCTGATGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 90 bp CGAAGCAGTCGATCAGCCACCTCCTGTGGGAATACTCCAGGTTCCTaGAGACACAATGTTCCATCTTGTCTGGCTGAACAGAACTTCTCA +
Preference number: 5 (lower is better)
Translates to: RSSRSATSCGNTPGS*RHNVPSCLAEQNFS
Trigger: TGAGAAGTTCTGTTCAGCCAGACAAGATGGAACATTGTGTCTGCAGGAACCTGGAGTATTCCCACAGGAGGTGGCTGATCGACTGCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTGACTTGAGTCGGTCTTaGCAGGCCAGTAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SSSREFLWLRLNVQACSPDLSRS*QASRAV
Trigger: CACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTC...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACGGCGCTTGCAGCCAGTaGCACTGGCAAATTCATAGG +
Preference number: 5 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHGACSQ*HWQIHR
Trigger: CCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCC...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGGCCACAGCAATCTGTaGGACATGGGGATCAGTATG +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSGHSNL*DMGISM
Trigger: CATACTGATCCCCATGTCCAACAGATTGCTGTGGCC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACTGCATGGTTAGAGACTaGAGTCGGTCTTTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHCMVRD*SRSLQA
Trigger: GGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCA...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS CCA 90 bp GTGGCCTCCCATGGCGCACAATGTGTTTTTCTAAGCTATCCAGAATaGCCACAGCAATCTGTTGGACATGGGGATCAGTATGTTCATGAT +
Preference number: 5 (lower is better)
Translates to: VASHGAQCVFLSYPE*PQQSVGHGDQYVHD
Trigger: ATCATGAACATACTGATCCCCATGTCCAACAGATTGCTGTGGCCATTCTGGATAGCTTAGAAAAACACATTGTGCGCCATGGGAGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTCTCAAGTTCCACTAACTaGTGGTGGCAGAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: HPAENSSGYDSMSKLVHLSSSTN*WWQKAF
Trigger: GAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGA...GAGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCCAAGCTCTCTAATCTaGGCAATGAGGCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSPSSLI*AMRQLQ
Trigger: CTGAAGTTGCCTCATTGCCAAGATTAGAGAGCTTGG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCCCAAGCTCTCTAATCTaGGCAATGAGGCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTPSSLI*AMRQLQ
Trigger: CTGAAGTTGCCTCATTGCCAAGATTAGAGAGCTTGG...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCATGCTTGGACGTTGTaGTATAAAGGCTTCAACGGC +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSHAWTL*YKGFNG
Trigger: GCCGTTGAAGCCTTTATACAACAACGTCCAAGCATG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp ATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCCATGCTTGGACGTTGTaGTATAAAGGCTTCAACGGC +
Preference number: 5 (lower is better)
Translates to: IIQQRIPLATTQCPSLFTHAWTL*YKGFNG
Trigger: GCCGTTGAAGCCTTTATACAACAACGTCCAAGCATG...GGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCACTGCATGACAAGCTaGGCTGCTTCAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSHCMTS*AASNLL
Trigger: TAACAGGTTTGAAGCAGCCAAGCTTGTCATGCAGTG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTACCAAGCTGTGCAGTTaGTTCTGTAGAAAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SSSREFLWLRLNVQACSPTKLCS*FCRKLG
Trigger: GCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGT...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCGCATGCTGCAATACCTaGAAGGATTCTTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSACCNT*KDSCCR
Trigger: TCTGCAGCAAGAATCCTTCAAGGTATTGCAGCATGC...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS GCA 90 bp TCGAGGGAGAGAGTTAATGAATTCAGCACCAGGCACTGGAGATTCTaGTGGATCCATTTGTTACTGCCAAGCCCACTGATAATGTCTGTA +
Preference number: 5 (lower is better)
Translates to: SRERVNEFSTRHWRF*WIHLLLPSPLIMSV
Trigger: TACAGACATTATCAGTGGGCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAATTCATTAACTCTCTCCCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 90 bp AGATCCTGCTTGGTTAAGTTAAATACACAGGCGCTTGCAGCCAGTTaGACTGGCAAATTCATAGGGTGGTTTCTCATCCCAGTAACCACA +
Preference number: 5 (lower is better)
Translates to: RSCLVKLNTQALAAS*TGKFIGWFLIPVTT
Trigger: TGTGGTTACTGGGATGAGAAACCACCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 90 bp GCAGAGATCTTTGCTTTGCGAATGCAGGCTCGCTTTAAGCGCATCTaGTTGCCCCTAAAAATACCCACAGTTCCATCATTCAATAGACCA +
Preference number: 5 (lower is better)
Translates to: AEIFALRMQARFKRI*LPLKIPTVPSFNRP
Trigger: TGGTCTATTGAATGATGGAACTGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 90 bp GTGATATCAGCATTCACACCTGTGGCATCAAGTTCCACTAACTTGTaGTGGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VISAFTPVASSSTNL*WQKAFRKATAEIFA
Trigger: AGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAATGCTGATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTTTAAGCGCATCTGGTaGCCCCTAAAAATACCCACA +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSFKRIW*PLKIPT
Trigger: TGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AAATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCAGCAGAGATCTTTGCTTaGCGAATGCAGGCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: KSSSREFLWLRLNVQACSAEIFA*RMQARF
Trigger: AAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGC...TGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGACTTGAGTCGGTCTTaGCAGGCCAGTAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRDLSRS*QASRAV
Trigger: CACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGGCGCTTGCAGCCAGTaGCACTGGCAAATTCATAGG +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRGACSQ*HWQIHR
Trigger: CCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCACTGCATGACAAGCTaGGCTGCTTCAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHHCMTS*AASNLL
Trigger: TAACAGGTTTGAAGCAGCCAAGCTTGTCATGCAGTG...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGGTGGGAAAGTCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRRWESH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGACTTTCCCACCT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS CCA 90 bp ATATCAGCATTCACACCTGTGGCATCAAGTTCCACTAACTTGTGGTaGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ISAFTPVASSSTNLW*QKAFRKATAEIFAL
Trigger: CAAAGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAATGCTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 90 bp AGGGAGAGAGTTAATGAATTCAGCACCAGGCACTGGAGATTCTGCTaGATCCATTTGTTACTGCCAAGCCCACTGATAATGTCTGTAATC +
Preference number: 5 (lower is better)
Translates to: RERVNEFSTRHWRFC*IHLLLPSPLIMSVI
Trigger: GATTACAGACATTATCAGTGGGCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAATTCATTAACTCTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp TCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACCTGCAGCAAGATCCTGCTaGGTTAAGTTAAATACACAG +
Preference number: 5 (lower is better)
Translates to: SSSREFLWLRLNVQACSPAARSC*VKLNTQ
Trigger: CTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGC...AGGTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCCATCCTTTGCATGTTTaGATCCTCATGGTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSHPLHV*ILMVAK
Trigger: CTTTGCAACCATGAGGATCAAAACATGCAAAGGATG...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACAGCAACTGCCATCCTTaGCATGTTTTGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHSNCHP*HVLILM
Trigger: CATGAGGATCAAAACATGCAAAGGATGGCAGTTGCT...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CTTAAGGTGACTAGTGCCACTATAAGGCATTACTGTCCCAGGGTGACAAGAAGCTACCTCTTTTTAACCTaGGGTGCAGCTGTACATTGT +
Preference number: 5 (lower is better)
Translates to: LKVTSATIRHYCPRVTRSYLFLT*GAAVHC
Trigger: ACAATGTACAGCTGCACCCAAGGTTAAAAAGAGGTA...GCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS GCA 90 bp CTTGGACGTTGTTGTATAAAGGCTTCAACGGCTTTATCTGTCACGTaGTTTCTCCCAGAAACATCCAGAGAAACAAGGTTAGGTAGGATG +
Preference number: 5 (lower is better)
Translates to: LGRCCIKASTALSVT*FLPETSRETRLGRM
Trigger: CATCCTACCTAACCTTGTTTCTCTGGATGTTTCTGGGAGAAAGCACGTGACAGATAAAGCCGTTGAAGCCTTTATACAACAACGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 90 bp TTGTTCTGTAGAAAGCTTGGCAGCCAGGATAGAAATGATAGCAACTaGCATCCTTTGCATGTTTTGATCCTCATGGTTGCAAAGCCACTG +
Preference number: 5 (lower is better)
Translates to: LFCRKLGSQDRNDSN*HPLHVLILMVAKPL
Trigger: CAGTGGCTTTGCAACCATGAGGATCAAAACATGCAAAGGATGGCAGTTGCTATCATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 90 bp AATACACAGGCGCTTGCAGCCAGTTGCACTGGCAAATTCATAGGGTaGTTTCTCATCCCAGTAACCACAAGCTTTAAAATTTCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: NTQALAASCTGKFIG*FLIPVTTSFKISGF
Trigger: AAAGCCAGAAATTTTAAAGCTTGTGGTTACTGGGATGAGAAACCACCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCAGAGATCTTTGCTTaGCGAATGCAGGCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRAEIFA*RMQARF
Trigger: AAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTGCATGGTTAGAGACTaGAGTCGGTCTTTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSCMVRD*SRSLQA
Trigger: GGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp GGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAAAATGTTCCATGGCTTaGAGCAGCAAATGGGTCACA +
Preference number: 5 (lower is better)
Translates to: GLKDLYATISHSGVGHFKKCSMA*SSKWVT
Trigger: TGTGACCCATTTGCTGCTCAAAGCCATGGAACATTT...TTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS TCA 90 bp GAATACTCCAGGTTCCTGCAGACACAATGTTCCATCTTGTCTGGCTaGACAGAACTTCTCAAGGTGAGTAGTCAAGAAATTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: EYSRFLQTQCSILSG*TELLKVSSQEIQAD
Trigger: ATCTGCTTGAATTTCTTGACTACTCACCTTGAGAAGTTCTGTTCAGCCAGACAAGATGGAACATTGTGTCTGCAGGAACCTGGAGTATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTCAACAGCAGAGATCTTaGCTTTGCGAATGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSQQQRS*LCECRL
Trigger: GAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTTG...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATGTTAAATGGAACATCTaGAAGGATCCGGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: KNGLKDLYATISHSGVGHVKWNI*KDPVTA
Trigger: TGCAGTGACCGGATCCTTCAAGATGTTCCATTTAAC...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGACCAAGCTGTGCAGTTaGTTCTGTAGAAAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRTKLCS*FCRKLG
Trigger: GCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGGGAAACCAAAAGTTaGCAAACCTCTCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRRETKS*QTSLGA
Trigger: AGCTCCCAGAGAGGTTTGCAAACTTTTGGTTTCCCT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS TCA 90 bp CCACAGCAATCTGTTGGACATGGGGATCAGTATGTTCATGATCTTTaGTGTTGTATAAATGCTGCAATCCTCCTTCTTCAATCAGCATGC +
Preference number: 5 (lower is better)
Translates to: PQQSVGHGDQYVHDL*CCINAAILLLQSAC
Trigger: GCATGCTGATTGAAGAAGGAGGATTGCAGCATTTATACAACATCAAAGATCATGAACATACTGATCCCCATGTCCAACAGATTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS GCA 90 bp TATTTGAAGAAGTTGCCTGACAATGAAGAGCTCAGTACCAAGCTGTaGAGTTTGTTCTGTAGAAAGCTTGGCAGCCAGGATAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: YLKKLPDNEELSTKL*SLFCRKLGSQDRND
Trigger: ATCATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGTACTGAGCTCTTCATTGTCAGGCAACTTCTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp AAAAATGGATTAAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTGCATGCTTGGACGTaGTTGTATAAAGGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KNGLKDLYATISHSGVGHLHAWT*LYKGFN
Trigger: GTTGAAGCCTTTATACAACAACGTCCAAGCATGCAA...ATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTTAATCCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAAATGTTCCATGGCTTaGAGCAGCAAATGGGTCACA +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRKCSMA*SSKWVT
Trigger: TGTGACCCATTTGCTGCTCAAAGCCATGGAACATTT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGTTAAATGGAACATCTaGAAGGATCCGGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRVKWNI*KDPVTA
Trigger: TGCAGTGACCGGATCCTTCAAGATGTTCCATTTAAC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGAGCAACTGCCATCCTTaGCATGTTTTGATCCTCATG +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRSNCHP*HVLILM
Trigger: CATGAGGATCAAAACATGCAAAGGATGGCAGTTGCT...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTGTTCTGTAGAAAGCTaGGCAGCCAGGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRCSVES*AARIEM
Trigger: CATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp AATCATCCAGCAGAGAATTCCTCTGGCTACGACTCAATGTCCAAGCTTGTTCACTGTACTTCAGCTATATaGTTCTTTCCGTTTCAGATG +
Preference number: 5 (lower is better)
Translates to: NHPAENSSGYDSMSKLVHCTSAI*FFPFQM
Trigger: CATCTGAAACGGAAAGAACAATATAGCTGAAGTACA...GTGAACAAGCTTGGACATTGAGTCGTAGCCAGAGGAATTCTCTGCTGGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS TCA 90 bp AGAATGGCCACAGCAATCTGTTGGACATGGGGATCAGTATGTTCATaGTCTTTGATGTTGTATAAATGCTGCAATCCTCCTTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: RMATAICWTWGSVCS*SLMLYKCCNPPSSI
Trigger: GATTGAAGAAGGAGGATTGCAGCATTTATACAACATCAAAGATCATGAACATACTGATCCCCATGTCCAACAGATTGCTGTGGCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS CCA 90 bp TCAGTTGGGAAAGACTCTAGAACCCTCATGAAGAGTTCTAACCCTTaGTTTTCAATAAAGTGTCTACAAGTGGTTGGAGATTCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SVGKDSRTLMKSSNP*FSIKCLQVVGDSSV
Trigger: CACAGATGAATCTCCAACCACTTGTAGACACTTTATTGAAAACCAAGGGTTAGAACTCTTCATGAGGGTTCTAGAGTCTTTCCCAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTCAAGTTCCACTAACTaGTGGTGGCAGAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSSSSTN*WWQKAF
Trigger: GAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTGCATGCTTGGACGTaGTTGTATAAAGGCTTCAAC +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRLHAWT*LYKGFN
Trigger: GTTGAAGCCTTTATACAACAACGTCCAAGCATGCAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGGCAGCAAGATCCTGCTaGGTTAAGTTAAATACACAG +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRAARSC*VKLNTQ
Trigger: CTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGC...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CATTTCAAAATAGCTGAATGCAAATCATCCAGCAGAGAATTCCTCTGGCTACGACATCCTTTGCATGTTTaGATCCTCATGGTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: HFKIAECKSSSREFLWLRHPLHV*ILMVAK
Trigger: CTTTGCAACCATGAGGATCAAAACATGCAAAGGATG...TCGTAGCCAGAGGAATTCTCTGCTGGATGATTTGCATTCAGCTATTTTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp AAAGGACCTGTATGCTACCATCTCACACTCTGGAGTTGGCCATTTCAAAATAGCTTTCTGCTTCACTATTaGAAGAAGTTGCCTGACAAT +
Preference number: 5 (lower is better)
Translates to: KGPVCYHLTLWSWPFQNSFLLHY*KKLPDN
Trigger: ATTGTCAGGCAACTTCTTCAAATAGTGAAGCAGAAA...GCTATTTTGAAATGGCCAACTCCAGAGTGTGAGATGGTAGCATACAGGTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTGAGCCCACCAATGATTaGAACAATGAGTGGTTCAAC +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSEPTND*NNEWFN
Trigger: GTTGAACCACTCATTGTTCAAATCATTGGTGGGCTC...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS TCA 90 bp TCTTGTACTTCAGCTATATTGTTCAAAAGTCCTAGAACTTTCTGCTaGATGGATGACTCAGTTGGGAAAGACTCTAGAACCCTCATGAAG +
Preference number: 5 (lower is better)
Translates to: SCTSAILFKSPRTFC*MDDSVGKDSRTLMK
Trigger: CTTCATGAGGGTTCTAGAGTCTTTCCCAACTGAGTCATCCATTCAGCAGAAAGTTCTAGGACTTTTGAACAATATAGCTGAAGTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATTTAAGCGCATCTGGTaGCCCCTAAAAATACCCACA +
Preference number: 5 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSFKRIW*PLKIPT
Trigger: TGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp ACACTGTGTAGGAGACTACTGATGTGGTCTATAAAATCTTTCCACATTAATTCATGTTCTGTAGAAAGCTaGGCAGCCAGGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: TLCRRLLMWSIKSFHINSCSVES*AARIEM
Trigger: CATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACA...TGAATTAATGTGGAAAGATTTTATAGACCACATCAGTAGTCTCCTACACAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545132.5
CDS-3UTR CAA 90 bp CATTTAAAGCACGATGAGCAAATTCTCTTATCATACGGCTATTCTCATCACCGGTTTCTGCTTCACTATTaGAAGAAGTTGCCTGACAAT +
Preference number: 5 (lower is better)
Translates to: HLKHDEQILLSYGYSHHRFLLHY*KKLPDN
Trigger: ATTGTCAGGCAACTTCTTCAAATAGTGAAGCAGAAA...CCGGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTACTACTACCATGGATTaGAGAGGGAAACCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSTTTMD*RGKPKV
Trigger: AACTTTTGGTTTCCCTCTCAAATCCATGGTAGTAGT...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS TCA 90 bp AGAGCTATGTCTGATGTAAACTGTTTATCATCTGAGATATCAAGATaGTTCAGATGTTTGAGTTCCCGAACTACATCCAGTATCTGGGTA +
Preference number: 5 (lower is better)
Translates to: RAMSDVNCLSSEISR*FRCLSSRTTSSIWV
Trigger: TACCCAGATACTGGATGTAGTTCGGGAACTCAAACATCTGAATCATCTTGATATCTCAGATGATAAACAGTTTACATCAGACATAGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS-3UTR CAA 90 bp CACTACAACATATGGAGATGTAGACAGTTAGTCTTTAACACAGAGTGCTGTAGTTATTTAGATATTTATTaGAGTCAGCGTCTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: HYNIWRCRQLVFNTECCSYLDIY*SQRLAL
Trigger: CAGAGCGAGACGCTGACTCAAATAAATATCTAAATA...ACTACAGCACTCTGTGTTAAAGACTAACTGTCTACATCTCCATATGTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS TCA 90 bp GAGGTTCCAAAGTGCACTCAAAGTAAATTTCAATGTAGTGTCCACTaGATTTTGATTGGTTTTCTGCTTCACTATTTGAAGAAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: EVPKCTQSKFQCSVH*ILIGFLLHYLKKLP
Trigger: AGGCAACTTCTTCAAATAGTGAAGCAGAAAACCAATCAAAATTCAGTGGACACTACATTGAAATTTACTTTGAGTGCACTTTGGAACCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS TCA 90 bp GAGGGTAAGATATTCCAAATGGACCAATCACAAAAAGGATTCCTGTaGTTCAACTATCCAATACTTATGGCTATCAATTTAGTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: EGKIFQMDQSQKGFL*FNYPILMAINLVWL
Trigger: AAGCCAGACTAAATTGATAGCCATAAGTATTGGATAGTTGAATCACAGGAATCCTTTTTGTGATTGGTCCATTTGGAATATCTTACCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS GCA 72 bp CCTCCTCCATGGCTGCGCCGGCCTGGTCCTCGGGCATaGAGCCTCCGTCCTGGGTGCGGCGGCGGGCCGGAC +
Preference number: 6 (lower is better)
Translates to: PPPWLRRPGPRA*SLRPGCGGGPD
Trigger: GTCCGGCCCGCCGCCGCACCCAGGACGGAGGCTGCATGCCCGAGGACCAGGCCGGCGCAGCCATGGAGGAGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp CGGCGCGGAGGCTCCAGGAGGCTCCGGCGAGCGGCGGCTCCGGGCTaGGCCCAGGCCTCGGCCTCTTTCCCTCAAGCTAGGAGCGTAGCA +
Preference number: 6 (lower is better)
Translates to: RRGGSRRLRRAAAPG*AQASASFPQARSVA
Trigger: TGCTACGCTCCTAGCTTGAGGGAAAGAGGCCGAGGCCTGGGCCAAGCCCGGAGCCGCCGCTCGCCGGAGCCTCCTGGAGCCTCCGCGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp GCCAGGAGTCGGACAGGCATCCCTGCAGCAAGATCCTaGTTGGTTAAGTTAAATACACAGGCGCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ARSRTGIPAARS*LVKLNTQALAA
Trigger: GGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGACTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp ACATCAGCCAGGAGTCGGACAGGCATCCCTGCAGCAAGATCCTGCTaGGTTAAGTTAAATACACAGGCGCTTGCAGCCAGTTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: TSARSRTGIPAARSC*VKLNTQALAASCTG
Trigger: GCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGACTCCTGGCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp CGATCAGCCACCTCCTGTGGGAATACTCCAGGTTCCTaGAGACACAATGTTCCATCTTGTCTGGCTGAACAG +
Preference number: 6 (lower is better)
Translates to: RSATSCGNTPGS*RHNVPSCLAEQ
Trigger: CTGTTCAGCCAGACAAGATGGAACATTGTGTCTGCAGGAACCTGGAGTATTCCCACAGGAGGTGGCTGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp AGGAGTCGGACAGGCATCCCTGCAGCAAGATCCTGCTaGGTTAAGTTAAATACACAGGCGCTTGCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: RSRTGIPAARSC*VKLNTQALAAS
Trigger: ACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCAGGATCTTGCTGCAGGGATGCCTGTCCGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp ACTTGTGGTGGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTaGCTTTGCGAATGCAGGCTCGCTTTAAGCGCATCTGGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: TCGGRKLSGKQQQRS*LCECRLALSASGCP
Trigger: GGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp TGGTGGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTTGCTTaGCGAATGCAGGCTCGCTTTAAGCGCATCTGGTTGCCCCTAAAA +
Preference number: 6 (lower is better)
Translates to: WWQKAFRKATAEIFA*RMQARFKRIWLPLK
Trigger: TTTTAGGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp GCATTCACACCTGTGGCATCAAGTTCCACTAACTTGTaGTGGCAGAAAGCTTTCCGGAAAGCAACAGCAGAG +
Preference number: 6 (lower is better)
Translates to: AFTPVASSSTNL*WQKAFRKATAE
Trigger: CTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp GGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTaGCTTTGCGAATGCAGGCTCGCTTTAAGCGCATCT +
Preference number: 6 (lower is better)
Translates to: GRKLSGKQQQRS*LCECRLALSAS
Trigger: AGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp CCGAACAAAGAATGCCCGTTCACTGTAACGCTTCAGTaGTTCTGCAATCTGAGTTTCATTGGCTTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: PNKECPFTVTLQ*FCNLSFIGFPR
Trigger: TCTGGGGAAGCCAATGAAACTCAGATTGCAGAAGCACTGAAGCGTTACAGTGAACGGGCATTCTTTGTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp TTCACACCTGTGGCATCAAGTTCCACTAACTTGTGGTaGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATC +
Preference number: 6 (lower is better)
Translates to: FTPVASSSTNLW*QKAFRKATAEI
Trigger: GATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp TCGAGGGAGAGAGTTAATGAATTCAGCACCAGGCACTaGAGATTCTGCTGGATCCATTTGTTACTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: SRERVNEFSTRH*RFCWIHLLLPS
Trigger: GCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAATTCATTAACTCTCTCCCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp AAAGCTTTCCGGAAAGCAACAGCAGAGATCTTTGCTTaGCGAATGCAGGCTCGCTTTAAGCGCATCTGGTTG +
Preference number: 6 (lower is better)
Translates to: KAFRKATAEIFA*RMQARFKRIWL
Trigger: CAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp TTCAAGTGGTGCATGGTTAGAGACTTGAGTCGGTCTTaGCAGGCCAGTAGAGCAGTGATGTCTGTGATTGAG +
Preference number: 6 (lower is better)
Translates to: FKWCMVRDLSRS*QASRAVMSVIE
Trigger: CTCAATCACAGACATCACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCACCACTTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp AAGTTGCCTGACAATGAAGAGCTCAGTACCAAGCTGTaGAGTTTGTTCTGTAGAAAGCTTGGCAGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: KLPDNEELSTKL*SLFCRKLGSQD
Trigger: ATCCTGGCTGCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGTACTGAGCTCTTCATTGTCAGGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp TTTGCTTTGCGAATGCAGGCTCGCTTTAAGCGCATCTaGTTGCCCCTAAAAATACCCACAGTTCCATCATTC +
Preference number: 6 (lower is better)
Translates to: FALRMQARFKRI*LPLKIPTVPSF
Trigger: GAATGATGGAACTGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp GCTTTGCGAATGCAGGCTCGCTTTAAGCGCATCTGGTaGCCCCTAAAAATACCCACAGTTCCATCATTCAAT +
Preference number: 6 (lower is better)
Translates to: ALRMQARFKRIW*PLKIPTVPSFN
Trigger: ATTGAATGATGGAACTGTGGGTATTTTTAGGGGCAACCAGATGCGCTTAAAGCGAGCCTGCATTCGCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp GGCAGCCAGGATAGAAATGATAGCAACTGCCATCCTTaGCATGTTTTGATCCTCATGGTTGCAAAGCCACTG +
Preference number: 6 (lower is better)
Translates to: GSQDRNDSNCHP*HVLILMVAKPL
Trigger: CAGTGGCTTTGCAACCATGAGGATCAAAACATGCAAAGGATGGCAGTTGCTATCATTTCTATCCTGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp ATCGTGATATCAGCATTCACACCTGTGGCATCAAGTTCCACTAACTaGTGGTGGCAGAAAGCTTTCCGGAAAGCAACAGCAGAGATCTTT +
Preference number: 6 (lower is better)
Translates to: IVISAFTPVASSSTN*WWQKAFRKATAEIF
Trigger: AAAGATCTCTGCTGTTGCTTTCCGGAAAGCTTTCTGCCACCACAAGTTAGTGGAACTTGATGCCACAGGTGTGAATGCTGATATCACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp AGAAAGCTTGGCAGCCAGGATAGAAATGATAGCAACTGCCATCCTTaGCATGTTTTGATCCTCATGGTTGCAAAGCCACTGCATGACAAG +
Preference number: 6 (lower is better)
Translates to: RKLGSQDRNDSNCHP*HVLILMVAKPLHDK
Trigger: CTTGTCATGCAGTGGCTTTGCAACCATGAGGATCAAAACATGCAAAGGATGGCAGTTGCTATCATTTCTATCCTGGCTGCCAAGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp AGAGTTAATGAATTCAGCACCAGGCACTGGAGATTCTaGTGGATCCATTTGTTACTGCCAAGCCCACTGATA +
Preference number: 6 (lower is better)
Translates to: RVNEFSTRHWRF*WIHLLLPSPLI
Trigger: TATCAGTGGGCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAATTCATTAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp TTGGTTAAGTTAAATACACAGGCGCTTGCAGCCAGTTaGACTGGCAAATTCATAGGGTGGTTTCTCATCCCA +
Preference number: 6 (lower is better)
Translates to: LVKLNTQALAAS*TGKFIGWFLIP
Trigger: TGGGATGAGAAACCACCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp GTTAATGAATTCAGCACCAGGCACTGGAGATTCTGCTaGATCCATTTGTTACTGCCAAGCCCACTGATAATG +
Preference number: 6 (lower is better)
Translates to: VNEFSTRHWRFC*IHLLLPSPLIM
Trigger: CATTATCAGTGGGCTTGGCAGTAACAAATGGATCCAGCAGAATCTCCAGTGCCTGGTGCTGAATTCATTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CCA 72 bp GCGCTTGCAGCCAGTTGCACTGGCAAATTCATAGGGTaGTTTCTCATCCCAGTAACCACAAGCTTTAAAATT +
Preference number: 6 (lower is better)
Translates to: ALAASCTGKFIG*FLIPVTTSFKI
Trigger: AATTTTAAAGCTTGTGGTTACTGGGATGAGAAACCACCCTATGAATTTGCCAGTGCAACTGGCTGCAAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp CCTGACAATGAAGAGCTCAGTACCAAGCTGTGCAGTTaGTTCTGTAGAAAGCTTGGCAGCCAGGATAGAAAT +
Preference number: 6 (lower is better)
Translates to: PDNEELSTKLCS*FCRKLGSQDRN
Trigger: ATTTCTATCCTGGCTGCCAAGCTTTCTACAGAACAAACTGCACAGCTTGGTACTGAGCTCTTCATTGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp AGAAAGCTTGGCAGCCAGGATAGAAATGATAGCAACTaGCATCCTTTGCATGTTTTGATCCTCATGGTTGCA +
Preference number: 6 (lower is better)
Translates to: RKLGSQDRNDSN*HPLHVLILMVA
Trigger: TGCAACCATGAGGATCAAAACATGCAAAGGATGGCAGTTGCTATCATTTCTATCCTGGCTGCCAAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp AGCCAGCAAACCTACAAATTGCATGCTTGGACGTTGTaGTATAAAGGCTTCAACGGCTTTATCTGTCACGTG +
Preference number: 6 (lower is better)
Translates to: SQQTYKLHAWTL*YKGFNGFICHV
Trigger: CACGTGACAGATAAAGCCGTTGAAGCCTTTATACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp TTTAAACATTTCAAGTGGTGCATGGTTAGAGACTTGAGTCGGTCTTaGCAGGCCAGTAGAGCAGTGATGTCTGTGATTGAGGTGTTAGAA +
Preference number: 6 (lower is better)
Translates to: FKHFKWCMVRDLSRS*QASRAVMSVIEVLE
Trigger: TTCTAACACCTCAATCACAGACATCACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCACCACTTGAAATGTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp GAGGAATTCAGAGTAACCAGCATCAGTAGCCAGCAAACCTACAAATaGCATGCTTGGACGTTGTTGTATAAAGGCTTCAACGGCTTTATC +
Preference number: 6 (lower is better)
Translates to: EEFRVTSISSQQTYK*HAWTLLYKGFNGFI
Trigger: GATAAAGCCGTTGAAGCCTTTATACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCTGGCTACTGATGCTGGTTACTCTGAATTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp ATTTTTAAACATTTCAAGTGGTGCATGGTTAGAGACTaGAGTCGGTCTTTGCAGGCCAGTAGAGCAGTGATG +
Preference number: 6 (lower is better)
Translates to: IFKHFKWCMVRD*SRSLQASRAVM
Trigger: CATCACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCACCACTTGAAATGTTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 72 bp AGAGTAACCAGCATCAGTAGCCAGCAAACCTACAAATaGCATGCTTGGACGTTGTTGTATAAAGGCTTCAAC +
Preference number: 6 (lower is better)
Translates to: RVTSISSQQTYK*HAWTLLYKGFN
Trigger: GTTGAAGCCTTTATACAACAACGTCCAAGCATGCAATTTGTAGGTTTGCTGGCTACTGATGCTGGTTACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS CAA 90 bp GTAGTTGTCATTTTTAAACATTTCAAGTGGTGCATGGTTAGAGACTaGAGTCGGTCTTTGCAGGCCAGTAGAGCAGTGATGTCTGTGATT +
Preference number: 6 (lower is better)
Translates to: VVVIFKHFKWCMVRD*SRSLQASRAVMSVI
Trigger: AATCACAGACATCACTGCTCTACTGGCCTGCAAAGACCGACTCAAGTCTCTAACCATGCACCACTTGAAATGTTTAAAAATGACAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS GCA 72 bp TGTTGTATAAAGGCTTCAACGGCTTTATCTGTCACGTaGTTTCTCCCAGAAACATCCAGAGAAACAAGGTTA +
Preference number: 6 (lower is better)
Translates to: CCIKASTALSVT*FLPETSRETRL
Trigger: TAACCTTGTTTCTCTGGATGTTTCTGGGAGAAAGCACGTGACAGATAAAGCCGTTGAAGCCTTTATACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5
CDS TCA 72 bp ACAGCAATCTGTTGGACATGGGGATCAGTATGTTCATaGTCTTTGATGTTGTATAAATGCTGCAATCCTCCT +
Preference number: 6 (lower is better)
Translates to: TAICWTWGSVCS*SLMLYKCCNPP
Trigger: AGGAGGATTGCAGCATTTATACAACATCAAAGATCATGAACATACTGATCCCCATGTCCAACAGATTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS TCA 72 bp TCTGTTGGACATGGGGATCAGTATGTTCATGATCTTTaGTGTTGTATAAATGCTGCAATCCTCCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: SVGHGDQYVHDL*CCINAAILLLQ
Trigger: TTGAAGAAGGAGGATTGCAGCATTTATACAACATCAAAGATCATGAACATACTGATCCCCATGTCCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294353.7
CDS CCA 72 bp AAAGACTCTAGAACCCTCATGAAGAGTTCTAACCCTTaGTTTTCAATAAAGTGTCTACAAGTGGTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: KDSRTLMKSSNP*FSIKCLQVVGD
Trigger: ATCTCCAACCACTTGTAGACACTTTATTGAAAACCAAGGGTTAGAACTCTTCATGAGGGTTCTAGAGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294353.7
ENST00000545132.5