RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZYG11A (Homo sapiens)

Ensembl gene IDs: ENSG00000203995

Ensembl transcript IDs: ENST00000371528.2, ENST00000371532.5, ENST00000612017.4

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATTTATCATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCCTACAAGCTCACTCACATACACAGC +
Preference number: 1 (lower is better)
Translates to: DLSLHVIFHLNTVCK*LSPTTPYKLTHIHS
Trigger: GCTGTGTATGTGAGTGAGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAATGATAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR TCA 90 bp GAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATCATACAAATCCAACCTTTTGTAACA +
Preference number: 1 (lower is better)
Translates to: ESSKLLLKGCRMSPT*LGITAIIQIQPFVT
Trigger: TGTTACAAAAGGTTGGATTTGTATGATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR GCA 90 bp GATTCAGATTTATCATTACATGTAATCTTTCATCTAAACACTGTCTaGAAATGCCTAAGTCCCACCACGCCCTACAAGCTCACTCACATA +
Preference number: 1 (lower is better)
Translates to: DSDLSLHVIFHLNTV*KCLSPTTPYKLTHI
Trigger: TATGTGAGTGAGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAATGATAAATCTGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR CCA 90 bp GCAAAGTCTCTTTCTGGCCTTTCGTCTTCCTACCATTTTTGGTCATaGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATCATTACA +
Preference number: 1 (lower is better)
Translates to: AKSLSGLSSSYHFWS*FHPNKMEGFRFIIT
Trigger: TGTAATGATAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAGACGAAAGGCCAGAAAGAGACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 2 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCC +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKNTVCK*LSPTTP
Trigger: GGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAACTCCAATGACAACTaGTGTGCAATTACTGCCAGG +
Preference number: 2 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLNSNDN*CAITAR
Trigger: CCTGGCAGTAATTGCACATCAGTTGTCATTGGAGTT...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCAGGTCCCACTCCCATaGCAAGCTCCCAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKQVPLP*QAPKGK
Trigger: TTTCCCTTTGGGAGCTTGTCATGGGAGTGGGACCTG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCTGATCTCGAACTCCTaGGTTCAGACAATCCACCTG +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKLISNS*VQTIHL
Trigger: CAGGTGGATTGTCTGAACTCAGGAGTTCGAGATCAG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 2 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAACTCCAATGACAACTaGTGTGCAATTACTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKNSNDN*CAITAR
Trigger: CCTGGCAGTAATTGCACATCAGTTGTCATTGGAGTT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 2 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGGTAAGAAAACTCCGTaGACTCTCTGGCAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYGKKTP*TLWQSL
Trigger: GAGACTTTGCCAGAGAGTTCACGGAGTTTTCTTACC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGACTCACAAACTCCAATaGCAACTGATGTGCAATTAC +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKTHKLQ*QLMCNY
Trigger: GTAATTGCACATCAGTTGTCATTGGAGTTTGTGAGT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 2 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCC +
Preference number: 2 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDNTVCK*LSPTTP
Trigger: GGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTCTTCCTACCATTTTTaGTCATGGTTCCACCCAAAT +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKSSYHF*SWFHPN
Trigger: ATTTGGGTGGAACCATGACCAAAAATGGTAGGAAGA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATC +
Preference number: 2 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLRMSPT*LGITAI
Trigger: GATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGATACACAGCATGTCATaGTCACATAACAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKIHSMS*SHNRKH
Trigger: ATGTTTCCTGTTATGTGAGCATGACATGCTGTGTAT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGACTCACAAACTCCAATaGCAACTGATGTGCAATTAC +
Preference number: 2 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKTHKLQ*QLMCNY
Trigger: GTAATTGCACATCAGTTGTCATTGGAGTTTGTGAGT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCCAGAGTCCACGGTTTaGGTCTTCAAAATTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDPESTV*VFKIAA
Trigger: AGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACTGATCTCGAACTCCTaGGTTCAGACAATCCACCTG +
Preference number: 2 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLLISNS*VQTIHL
Trigger: CAGGTGGATTGTCTGAACTCAGGAGTTCGAGATCAG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACAACTCCAATGACAACTaGTGTGCAATTACTGCCAGG +
Preference number: 2 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDNSNDN*CAITAR
Trigger: CCTGGCAGTAATTGCACATCAGTTGTCATTGGAGTT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 2 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 2 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATC +
Preference number: 2 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDRMSPT*LGITAI
Trigger: GATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACACCCCTCTATTCATTTaGGATGAGGTCTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHTPLFI*DEVSLC
Trigger: ACAGAGTGAGACCTCATCTCAAATGAATAGAGGGGT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAACCCCTCTATTCATTTaGGATGAGGTCTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLTPLFI*DEVSLC
Trigger: ACAGAGTGAGACCTCATCTCAAATGAATAGAGGGGT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCTCCAACAGGGGTTCTaGCTTCTAAACACTACATTT +
Preference number: 2 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDLQQGF*LLNTTF
Trigger: AAATGTAGTGTTTAGAAGGCAGAACCCCTGTTGGAG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATC +
Preference number: 2 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLRMSPT*LGITAI
Trigger: GATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR GCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACTCCAACAGGGGTTCTaGCTTCTAAACACTACATTT +
Preference number: 2 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLLQQGF*LLNTTF
Trigger: AAATGTAGTGTTTAGAAGGCAGAACCCCTGTTGGAG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGCAGAACACCTGACATaGAGGAAGAGCACACACCTC +
Preference number: 3 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYAEHLT*RKSTHL
Trigger: GAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCGGAGTTTTACCACGTaGGCAAGGCTGATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKRSFTT*ARLISN
Trigger: GTTCGAGATCAGCCTTGCCAACGTGGTAAAACTCCG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACTGTAATCCCAGCACTTaGGGAGGCCGAGACGGGTGG +
Preference number: 3 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDCNPST*GGRDGW
Trigger: CCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTACA...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCCCAGAGTCCACGGTTaGAGTCTTCAAAATTGCTGC +
Preference number: 3 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYPRVHG*SLQNCC
Trigger: GCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCCCAGAGTCCACGGTTaGAGTCTTCAAAATTGCTGC +
Preference number: 3 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLPRVHG*SLQNCC
Trigger: GCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTGTAATCCCAGCACTTaGGGAGGCCGAGACGGGTGG +
Preference number: 3 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHCNPST*GGRDGW
Trigger: CCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTACA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGCAGAACACCTGACATaGAGGAAGAGCACACACCTC +
Preference number: 3 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDAEHLT*RKSTHL
Trigger: GAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR GCA 72 bp ACGCCCTACAAGCTCACTCACATACACAGCATGTCATaGTCACATAACAGGAAACATGCCAAAGATAGACAC +
Preference number: 3 (lower is better)
Translates to: TPYKLTHIHSMS*SHNRKHAKDRH
Trigger: GTGTCTATCTTTGGCATGTTTCCTGTTATGTGAGCATGACATGCTGTGTATGTGAGTGAGCTTGTAGGGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCAGAATGAGTCCAACTaGACTTGGGATTACAGCTAT +
Preference number: 3 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLQNESN*TWDYSY
Trigger: ATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGTTTGAGTCTTCAAAATaGCTGCTGAAAGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKFESSK*LLKGCR
Trigger: TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAA...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCGGAGTTTTACCACGTaGGCAAGGCTGATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHRSFTT*ARLISN
Trigger: GTTCGAGATCAGCCTTGCCAACGTGGTAAAACTCCG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR GCA 72 bp TTACATGTAATCTTTCATCTAAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCCTACAAGCTCACTCAC +
Preference number: 3 (lower is better)
Translates to: LHVIFHLNTVCK*LSPTTPYKLTH
Trigger: GTGAGTGAGCTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR CCA 72 bp AGAAAACTCCGTGAACTCTCTGGCAAAGTCTCTTTCTaGCCTTTCGTCTTCCTACCATTTTTGGTCATGGTT +
Preference number: 3 (lower is better)
Translates to: RKLRELSGKVSF*PFVFLPFLVMV
Trigger: AACCATGACCAAAAATGGTAGGAAGACGAAAGGCCAGAAAGAGACTTTGCCAGAGAGTTCACGGAGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAGCAGAACACCTGACATaGAGGAAGAGCACACACCTC +
Preference number: 3 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGAEHLT*RKSTHL
Trigger: GAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGC...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTCTAAACACTACATTTaGAAGCATATGCTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYSKHYI*KHMLPK
Trigger: CTTGGGAAGCATATGCTTCAAAATGTAGTGTTTAGA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGTCTTCCTACCATTTTaGGTCATGGTTCCACCCAAA +
Preference number: 3 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDVFLPF*VMVPPK
Trigger: TTTGGGTGGAACCATGACCAAAAATGGTAGGAAGAC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR TCA 72 bp AAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATCATACAAATCCAACCT +
Preference number: 3 (lower is better)
Translates to: KLLLKGCRMSPT*LGITAIIQIQP
Trigger: AGGTTGGATTTGTATGATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCAGAATGAGTCCAACTaGACTTGGGATTACAGCTAT +
Preference number: 3 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDQNESN*TWDYSY
Trigger: ATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACTTTGAGTCTTCAAAATaGCTGCTGAAAGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDFESSK*LLKGCR
Trigger: TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAA...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATTTGAGTCTTCAAAATaGCTGCTGAAAGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGFESSK*LLKGCR
Trigger: TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGCGCGCCCACCACGCCTaGGAGGCACACGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLRAHHA*EAHGAS
Trigger: GCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCG...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCTGCCGGCGAGCTTTTaGAATGCCCGGCGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLLPASF*NARRGD
Trigger: GTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGGCGAGCTTTTGAAATaGCCGGCGAGGCGACGCGCA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLGELLK*PARRRA
Trigger: TGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGCTAGCGCCGCGCCCTaGCGGCGAGCTTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLASAAP*RRAFEM
Trigger: CATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGCAAGAAATGAACCATaGCAACCCCGGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLARNEP*QPRRRG
Trigger: GCCCCGCCGCCGGGGTTGCCATGGTTCATTTCTTGC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCCCTTGGCCAGGCCCTaGCGTGTTAGGTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLPLARP*RVRLRA
Trigger: CGCTCTCAACCTAACACGCCAGGGCCTGGCCAAGGG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGAACCAAGCGGGCGGCTaGCAGGACGCGCCCACCACG +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLNQAGG*QDAPTT
Trigger: CGTGGTGGGCGCGTCCTGGCAGCCGCCCGCTTGGTT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCTCCCCAGACCAACCTaGCACGACCCAGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKLPRPT*HDPAAH
Trigger: GTGAGCGGCTGGGTCGTGGCAGGTTGGTCTGGGGAG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCCTCCGACACGCCGCTaGCGGGGCCAACCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDPPTRR*RGQPFS
Trigger: GGAGAACGGTTGGCCCCGGCAGCGGCGTGTCGGAGG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGGCTAGCGCCGCGCCCTaGCGGCGAGCTTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKASAAP*RRAFEM
Trigger: CATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGC...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCAGGTCCCACTCCCATaGCAAGCTCCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLQVPLP*QAPKGK
Trigger: TTTCCCTTTGGGAGCTTGTCATGGGAGTGGGACCTG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAGCTACTCAGGAGGCTaGGGCAGGAGAATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLSYSGG*GRRIAG
Trigger: TCCAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371528.2
ENST00000371532.5
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCTGCCGGCGAGCTTTTaGAATGCCCGGCGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYLPASF*NARRGD
Trigger: GTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCTCCCCAGACCAACCTaGCACGACCCAGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYLPRPT*HDPAAH
Trigger: GTGAGCGGCTGGGTCGTGGCAGGTTGGTCTGGGGAG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCCCGGGTGCAAGAAATaGACCATGGCAACCCCGGCG +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKPGCKK*TMATPA
Trigger: CGCCGGGGTTGCCATGGTTCATTTCTTGCACCCGGG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACGCTCGGCTACTTCCTaGGGGAAACTCCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRRSATS*GKLQCS
Trigger: GGAGCATTGGAGTTTCCCTCAGGAAGTAGCCGAGCG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGCAGGTCCCACTCCCATaGCAAGCTCCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLQVPLP*QAPKGK
Trigger: TTTCCCTTTGGGAGCTTGTCATGGGAGTGGGACCTG...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCGCGCCCACCACGCCTaGGAGGCACACGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDRAHHA*EAHGAS
Trigger: GCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGCACTGGCTGTGAACTaGACTCGCAAATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLALAVN*TRKSNG
Trigger: CCCATTGGATTTGCGAGTGCAGTTCACAGCCAGTGC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTGCTCAGGTGAGAGCTaGAGAGCCAGAATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLCSGES*RARIEV
Trigger: CACCTCTATTCTGGCTCTGCAGCTCTCACCTGAGCA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCCTCCGACACGCCGCTaGCGGGGCCAACCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDPPTRR*RGQPFS
Trigger: GGAGAACGGTTGGCCCCGGCAGCGGCGTGTCGGAGG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGGCGAGCTTTTGAAATaGCCGGCGAGGCGACGCGCA +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYGELLK*PARRRA
Trigger: TGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCCCTTGGCCAGGCCCTaGCGTGTTAGGTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLPLARP*RVRLRA
Trigger: CGCTCTCAACCTAACACGCCAGGGCCTGGCCAAGGG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRVIPAL*EAETGG
Trigger: TCCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKVIPAL*EAETGG
Trigger: TCCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGGCCAAGTCATCACCCTaGGAAATCGCTCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLAKSSP*EIARLL
Trigger: AAGTAGCCGAGCGATTTCTCAGGGTGATGACTTGGC...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTCGGCTCAGTGCTTCTaGAATCTGACTCATACTGGC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLSAQCF*NLTHTG
Trigger: GCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAAACCAAGCGGGCGGCTaGCAGGACGCGCCCACCACG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLNQAGG*QDAPTT
Trigger: CGTGGTGGGCGCGTCCTGGCAGCCGCCCGCTTGGTT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGGTTGCCTCGGAAAATaGTGGCTGTTCTGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLGCLGK*WLFCQS
Trigger: TGACTGACAGAACAGCCAGCATTTTCCGAGGCAACC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGGCACTGGCTGTGAACTaGACTCGCAAATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLALAVN*TRKSNG
Trigger: CCCATTGGATTTGCGAGTGCAGTTCACAGCCAGTGC...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGGGGTTGCCTCACTGTaGTCCTGGATATCACACAAA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLGVASL*SWISHK
Trigger: TTTGTGTGATATCCAGGAGCACAGTGAGGCAACCCC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGATCCAGAATGGAGGCTaGAATCTGCTGTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLIQNGG*NLLCFG
Trigger: CCCAAAGCACAGCAGATTGCAGCCTCCATTCTGGAT...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGCAAGAAATGAACCATaGCAACCCCGGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDARNEP*QPRRRG
Trigger: GCCCCGCCGCCGGGGTTGCCATGGTTCATTTCTTGC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGTTGCATGCAGATCTTaGAGAAGAGTACGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLVACRS*RRVRLW
Trigger: CCAGAGGCGTACTCTTCTCCAAGATCTGCATGCAAC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCGCTCGGCTACTTCCTaGGGGAAACTCCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKRSATS*GKLQCS
Trigger: GGAGCATTGGAGTTTCCCTCAGGAAGTAGCCGAGCG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCCTGGCGTGTTAGGTTaGGAGCGCAAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDPGVLG*ERKHWL
Trigger: CAGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACGCGCCCACCACGCCTaGGAGGCACACGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGRAHHA*EAHGAS
Trigger: GCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGACTGGGAGGTCAGCGTaGACTGCAGTAGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKTGRSA*TAVAFS
Trigger: ACTGAATGCTACTGCAGTGCACGCTGACCTCCCAGT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATGCTCAGGTGAGAGCTaGAGAGCCAGAATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRCSGES*RARIEV
Trigger: CACCTCTATTCTGGCTCTGCAGCTCTCACCTGAGCA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTGCTCAGGTGAGAGCTaGAGAGCCAGAATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKCSGES*RARIEV
Trigger: CACCTCTATTCTGGCTCTGCAGCTCTCACCTGAGCA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTCAAGCTGTGCCGTTTaGTCAGGTGAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKSSCAV*SGESCR
Trigger: TCTGCAGCTCTCACCTGAGCAAACGGCACAGCTTGA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAATCTGACTCATACTaGCTCCTCCAGCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLKSDSY*LLQQPS
Trigger: TGAGGGTTGCTGGAGGAGCCAGTATGAGTCAGATTT...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTCTGTGAACAGCCTGTaGAGGGCTTCCTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLSVNSL*RASFTK
Trigger: TTTTGTGAAGGAAGCCCTCCACAGGCTGTTCACAGA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCCCGGGTGCAAGAAATaGACCATGGCAACCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDPGCKK*TMATPA
Trigger: CGCCGGGGTTGCCATGGTTCATTTCTTGCACCCGGG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCCCAGGGCATCCTTCTaGGCGTCAGGAGGGACGATG +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDPRASF*ASGGTM
Trigger: CATCGTCCCTCCTGACGCTCAGAAGGATGCCCTGGG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTGCAGAGTCCACTTATaGTGTCTGGAACTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKCRVHL*CLELGG
Trigger: ACCTCCCAGTTCCAGACATCATAAGTGGACTCTGCA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCGCAAGCACTGGCTGTaGACTGCACTCGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKRKHWL*TALANP
Trigger: TGGATTTGCGAGTGCAGTTCACAGCCAGTGCTTGCG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCGCAAGCACTGGCTGTaGACTGCACTCGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLRKHWL*TALANP
Trigger: TGGATTTGCGAGTGCAGTTCACAGCCAGTGCTTGCG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTGCCGTTTGCTCAGGTaGGAGCTGCAGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYCRLLR*ELQSQN
Trigger: ATTCTGGCTCTGCAGCTCTCACCTGAGCAAACGGCA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGCTGATAACAATGCTCTaGGGTACTAGAACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLLITML*GTRTQV
Trigger: GACCTGGGTTCTAGTACCTCAGAGCATTGTTATCAG...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACAAAGTGTAGGGAGATaGCTCTTCCTGTACCACGCA +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRQSVGR*LFLYHA
Trigger: TGCGTGGTACAGGAAGAGGCATCTCCCTACACTTTG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTCAGTCAGCTTGCCTTaGCAAGTCATCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKSVSLP*QVITLR
Trigger: TCTCAGGGTGATGACTTGGCAAGGCAAGCTGACTGA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGTGGGCTATGATACCTaGAGCAAAATAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLVGYDT*SKIADF
Trigger: GAAGTCAGCTATTTTGCTGCAGGTATCATAGCCCAC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCTGTGCTTTGGGGGTTaGCTCACTGTGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLLCFGG*LTVLLD
Trigger: ATCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCATCTAAACACTGTCTaGAAATGCCTAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLHLNTV*KCLSPT
Trigger: GGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGCAAGAAATGAACCATaGCAACCCCGGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDARNEP*QPRRRG
Trigger: GCCCCGCCGCCGGGGTTGCCATGGTTCATTTCTTGC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGGTTGCATGCAGATCTTaGAGAAGAGTACGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKVACRS*RRVRLW
Trigger: CCAGAGGCGTACTCTTCTCCAAGATCTGCATGCAAC...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCCAGAGCTGAACCTCTaGTTGAGAGAAGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKPELNL*LREVAK
Trigger: CTTGGCAACTTCTCTCAACCAGAGGTTCAGCTCTGG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACCCGGGTGCAAGAAATaGACCATGGCAACCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLPGCKK*TMATPA
Trigger: CGCCGGGGTTGCCATGGTTCATTTCTTGCACCCGGG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCCCAGGGCATCCTTCTaGGCGTCAGGAGGGACGATG +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHPRASF*ASGGTM
Trigger: CATCGTCCCTCCTGACGCTCAGAAGGATGCCCTGGG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGCCAAGTCATCACCCTaGGAAATCGCTCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKAKSSP*EIARLL
Trigger: AAGTAGCCGAGCGATTTCTCAGGGTGATGACTTGGC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCCTGGCGTGTTAGGTTaGGAGCGCAAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDPGVLG*ERKHWL
Trigger: CAGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGTGGAAGAGAGCTCTCTaGCTTCTGCTATGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLWKRAL*LLLCCS
Trigger: TGAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCA...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGCGGGAAAAATGTCTTaGAAGATCTATAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLAGKMS*KIYRSP
Trigger: TGGTGACCTATAGATCTTTCAAGACATTTTTCCCGC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCCAGAGTCCACGGTTTaGGTCTTCAAAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKPESTV*VFKIAA
Trigger: AGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATAGCTACTCAGGAGGCTaGGGCAGGAGAATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDSYSGG*GRRIAG
Trigger: TCCAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371528.2
ENST00000371532.5
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAGACACTGGAGGTTTTaGTGGATCCACCTATTGCTG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKRHWRF*WIHLLL
Trigger: CAGCAATAGGTGGATCCAGCAAAACCTCCAGTGTCT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAGAGGTGACACTCACTaGCATTGTTTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKRGDTH*HCLHLG
Trigger: CCCAAGATGCAAACAATGGCAGTGAGTGTCACCTCT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGAGCTCTCTGACTTCTaGTATGTTGTTCAAAAGACC +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLELSDF*YVVQKT
Trigger: GGTCTTTTGAACAACATAGCAGAAGTCAGAGAGCTC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYNTVCK*LSPTTP
Trigger: GGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAAGAGCCAGCATCCGTaGCCAATAGTCCCACAAATT +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKKSQHP*PIVPQI
Trigger: AATTTGTGGGACTATTGGCCACGGATGCTGGCTCTT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTCTGTGAACAGCCTGTaGAGGGCTTCCTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKSVNSL*RASFTK
Trigger: TTTTGTGAAGGAAGCCCTCCACAGGCTGTTCACAGA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGCACTCGCAAATCCAATaGGTGATTCCTCATTCCTAT +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLHSQIQ*VIPHSY
Trigger: ATAGGAATGAGGAATCACCCATTGGATTTGCGAGTG...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCCCTTGGCCAGGCCCTaGCGTGTTAGGTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHPLARP*RVRLRA
Trigger: CGCTCTCAACCTAACACGCCAGGGCCTGGCCAAGGG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGAACAGGCATCCCCTTaGCCAGGCCCTGGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDEQASP*PGPGVL
Trigger: TAACACGCCAGGGCCTGGCCAAGGGGATGCCTGTTC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAATCTGCTGTGCTTTaGGGGTTGCCTCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYQSAVL*GLPHCA
Trigger: AGCACAGTGAGGCAACCCCCAAAGCACAGCAGATTG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGTCGGCTCAGTGCTTCTaGAATCTGACTCATACTGGC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKSAQCF*NLTHTG
Trigger: GCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGA...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTCGGCTCAGTGCTTCTaGAATCTGACTCATACTGGC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYSAQCF*NLTHTG
Trigger: GCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAACCCCTCTATTCATTTaGGATGAGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRTPLFI*DEVSLC
Trigger: ACAGAGTGAGACCTCATCTCAAATGAATAGAGGGGT...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCAAAGTGTAGGGAGATaGCTCTTCCTGTACCACGCA +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLQSVGR*LFLYHA
Trigger: TGCGTGGTACAGGAAGAGGCATCTCCCTACACTTTG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGCACTGGCTGTGAACTaGACTCGCAAATCCAATGGG +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDALAVN*TRKSNG
Trigger: CCCATTGGATTTGCGAGTGCAGTTCACAGCCAGTGC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACTCACTGCCATTGTTTaGATCTTGGGGTTTTCATGC +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRLTAIV*ILGFSC
Trigger: GCATGAAAACCCCAAGATGCAAACAATGGCAGTGAG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATTCAAGCTGTGCCGTTTaGTCAGGTGAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDSSCAV*SGESCR
Trigger: TCTGCAGCTCTCACCTGAGCAAACGGCACAGCTTGA...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGGAGCTCTCTGACTTCTaGTATGTTGTTCAAAAGACC +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLELSDF*YVVQKT
Trigger: GGTCTTTTGAACAACATAGCAGAAGTCAGAGAGCTC...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGCTCCAACAGGGGTTCTaGCTTCTAAACACTACATTT +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLLQQGF*LLNTTF
Trigger: AAATGTAGTGTTTAGAAGGCAGAACCCCTGTTGGAG...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTGCCTCGGAAAATGCTaGCTGTTCTGTCAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYCLGKC*LFCQSA
Trigger: AGCTGACTGACAGAACAGCCAGCATTTTCCGAGGCA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGTCCACTTATGATGTCTaGAACTGGGAGGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLSTYDV*NWEVSV
Trigger: CACGCTGACCTCCCAGTTCCAGACATCATAAGTGGA...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAGAACAGGCATCCCCTTaGCCAGGCCCTGGCGTGTTA +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLEQASP*PGPGVL
Trigger: TAACACGCCAGGGCCTGGCCAAGGGGATGCCTGTTC...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGTTGCATGCAGATCTTaGAGAAGAGTACGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKVACRS*RRVRLW
Trigger: CCAGAGGCGTACTCTTCTCCAAGATCTGCATGCAAC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCCAGAGCTGAACCTCTaGTTGAGAGAAGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKPELNL*LREVAK
Trigger: CTTGGCAACTTCTCTCAACCAGAGGTTCAGCTCTGG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTCTTCCTACCATTTTTaGTCATGGTTCCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLSSYHF*SWFHPN
Trigger: ATTTGGGTGGAACCATGACCAAAAATGGTAGGAAGA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTTCTGCTTATCTGGTTaGACTCTGGTAATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLFCLSG*TLVIVW
Trigger: CCAAACTATTACCAGAGTCCAACCAGATAAGCAGAA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCGCTCGGCTACTTCCTaGGGGAAACTCCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHRSATS*GKLQCS
Trigger: GGAGCATTGGAGTTTCCCTCAGGAAGTAGCCGAGCG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCTACAGCTTCATCAGTaGTGCAATTGCCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKLQLHQ*CNCPQK
Trigger: TTTCTGGGGGCAATTGCATCACTGATGAAGCTGTAG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKSASEI*LILAPP
Trigger: TGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATTCCTTCACAAAACATaGTCTGTTCCTGTATCGGCT +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRFLHKT*SVPVSA
Trigger: AGCCGATACAGGAACAGATCATGTTTTGTGAAGGAA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACCTGGCGTGTTAGGTTaGGAGCGCAAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGPGVLG*ERKHWL
Trigger: CAGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTGCCGTTTGCTCAGGTaGGAGCTGCAGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDCRLLR*ELQSQN
Trigger: ATTCTGGCTCTGCAGCTCTCACCTGAGCAAACGGCA...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATATGTCAGGTGGGCTATaGTACCTGCAGCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYMSGGL*YLQQNS
Trigger: GCTATTTTGCTGCAGGTATCATAGCCCACCTGACAT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGATGTCAGGTGGGCTATaGTACCTGCAGCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKMSGGL*YLQQNS
Trigger: GCTATTTTGCTGCAGGTATCATAGCCCACCTGACAT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCTGATCTCGAACTCCTaGGTTCAGACAATCCACCTG +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDLISNS*VQTIHL
Trigger: CAGGTGGATTGTCTGAACTCAGGAGTTCGAGATCAG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGGTAAGAAAACTCCGTaGACTCTCTGGCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKGKKTP*TLWQSL
Trigger: GAGACTTTGCCAGAGAGTTCACGGAGTTTTCTTACC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGGGTAAGAAAACTCCGTaGACTCTCTGGCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLGKKTP*TLWQSL
Trigger: GAGACTTTGCCAGAGAGTTCACGGAGTTTTCTTACC...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCTGATAACAATGCTCTaGGGTACTAGAACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKLITML*GTRTQV
Trigger: GACCTGGGTTCTAGTACCTCAGAGCATTGTTATCAG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGAGAGGTGACACTCACTaGCATTGTTTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKRGDTH*HCLHLG
Trigger: CCCAAGATGCAAACAATGGCAGTGAGTGTCACCTCT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCCAATTCTGTATGGTTaGATGCAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKPILYG*MQILEK
Trigger: CTTCTCCAAGATCTGCATGCAACCATACAGAATTGG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCTGGTTGAGAGAAGTTaGCAAGGAGCGGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKLVERS*QGAGKM
Trigger: CATTTTTCCCGCTCCTTGGCAACTTCTCTCAACCAG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCTGTGCTTTGGGGGTTaGCTCACTGTGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDLCFGG*LTVLLD
Trigger: ATCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACTCCAACAGGGGTTCTaGCTTCTAAACACTACATTT +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRLQQGF*LLNTTF
Trigger: AAATGTAGTGTTTAGAAGGCAGAACCCCTGTTGGAG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAGAAGAGTACGCCTCTaGAAGTCACGGGATATCCAA +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYRRVRL*KSRDIQ
Trigger: TTGGATATCCCGTGACTTCCAGAGGCGTACTCTTCT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGAGAAGAGTACGCCTCTaGAAGTCACGGGATATCCAA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKRRVRL*KSRDIQ
Trigger: TTGGATATCCCGTGACTTCCAGAGGCGTACTCTTCT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGTAATCCCAGCACTTTaGGAGGCCGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHVIPAL*EAETGG
Trigger: TCCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTAC...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGTCTTCCTACCATTTTTaGTCATGGTTCCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLSSYHF*SWFHPN
Trigger: ATTTGGGTGGAACCATGACCAAAAATGGTAGGAAGA...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAAATCTGACTCATACTaGCTCCTCCAGCAACCTTGC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYKSDSY*LLQQPC
Trigger: GCAAGGTTGCTGGAGGAGCCAGTATGAGTCAGATTT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCGCAAATCCAATGGGTaGTTCCTCATTCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDRKSNG*FLIPIA
Trigger: GGCTATAGGAATGAGGAATCACCCATTGGATTTGCG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACGCAAGCACTGGCTGTaGACTGCACTCGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLRKHWL*TALANP
Trigger: TGGATTTGCGAGTGCAGTTCACAGCCAGTGCTTGCG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATCTCCAAGACTTGGATaGAGATTTGCAATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRSPRLG*RFAILD
Trigger: ATCAAGGATTGCAAATCTTCATCCAAGTCTTGGAGA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTGGAAGAGAGCTCTCTaGCTTCTGCTATGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYWKRAL*LLLCCS
Trigger: TGAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGTACAGAGTAAACTGTTaGTATGCTTCAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLYRVNC*YASAHL
Trigger: AAGATGTGCTGAAGCATATCAACAGTTTACTCTGTA...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCTGCAGCAAAATAGCTaGCTTCCATTTCCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDLQQNS*LPFPCY
Trigger: GTAGCAGGGAAATGGAAGTCAGCTATTTTGCTGCAG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAACTCACAAACTCCAATaGCAACTGATGTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRTHKLQ*QLMCNY
Trigger: GTAATTGCACATCAGTTGTCATTGGAGTTTGTGAGT...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCCAGAGTCCACGGTTTaGGTCTTCAAAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDPESTV*VFKIAA
Trigger: AGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCAGGTCCCACTCCCATaGCAAGCTCCCAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHQVPLP*QAPKGK
Trigger: TTTCCCTTTGGGAGCTTGTCATGGGAGTGGGACCTG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATACCCCTCTATTCATTTaGGATGAGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYTPLFI*DEVSLC
Trigger: ACAGAGTGAGACCTCATCTCAAATGAATAGAGGGGT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTCAGTTTCATTTGGTTaGCTCGGAAAATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYSVSFG*LGKCWL
Trigger: CAGCCAGCATTTTCCGAGGCAACCAAATGAAACTGA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCTCACTGCCATTGTTTaGATCTTGGGGTTTTCATGC +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLLTAIV*ILGFSC
Trigger: GCATGAAAACCCCAAGATGCAAACAATGGCAGTGAG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCTGTGCTTTGGGGGTTaGCTCACTGTGCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHLCFGG*LTVLLD
Trigger: ATCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDNTVCK*LSPTTP
Trigger: GGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCTCCTCCAGCAACCTTaGCAAGTCATCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDLLQQP*QVITLR
Trigger: TCTCAGGGTGATGACTTGGCAAGGTTGCTGGAGGAG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACTATGATGTCTGGAACTaGGAGGTCAGCGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDYDVWN*EVSVHC
Trigger: GCAGTGCACGCTGACCTCCCAGTTCCAGACATCATA...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAAAGGTCTCCAAGACTTaGATGAAGATTTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRKVSKT*MKICNP
Trigger: AGGATTGCAAATCTTCATCCAAGTCTTGGAGACCTT...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATAGAAGAGTACGCCTCTaGAAGTCACGGGATATCCAA +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDRRVRL*KSRDIQ
Trigger: TTGGATATCCCGTGACTTCCAGAGGCGTACTCTTCT...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCAATCTGCTGTGCTTTaGGGGTTGCCTCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDQSAVL*GLPHCA
Trigger: AGCACAGTGAGGCAACCCCCAAAGCACAGCAGATTG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATTCTGCTTATCTGGTTaGACTCTGGTAATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRFCLSG*TLVIVW
Trigger: CCAAACTATTACCAGAGTCCAACCAGATAAGCAGAA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCAAGTCATCACCCTaGGAAATCGCTCGGCTACTT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHAKSSP*EIARLL
Trigger: AAGTAGCCGAGCGATTTCTCAGGGTGATGACTTGGC...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCCCAGAAATATCCAATaGCACAACATTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDPRNIQ*HNIGQD
Trigger: ATCCTGCCCAATGTTGTGTCATTGGATATTTCTGGG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGCGGGAAAAATGTCTTaGAAGATCTATAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKAGKMS*KIYRSP
Trigger: TGGTGACCTATAGATCTTTCAAGACATTTTTCCCGC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGAAGAGCACACACCTCTaGAATTCCTTAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKKSTHL*NSLGSE
Trigger: TTCTGAACCTAAGGAATTTCAGAGGTGTGTGCTCTT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGAAGAGCACACACCTCTaGAATTCCTTAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLKSTHL*NSLGSE
Trigger: TTCTGAACCTAAGGAATTTCAGAGGTGTGTGCTCTT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYRMSPT*LGITAI
Trigger: GATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCAAAGTGTAGGGAGATaGCTCTTCCTGTACCACGCA +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDQSVGR*LFLYHA
Trigger: TGCGTGGTACAGGAAGAGGCATCTCCCTACACTTTG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGATCTTGGGGTTTTCATaGTTACAGAGCCATCTCATG +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLILGFS*LQSHLM
Trigger: CATGAGATGGCTCTGTAAGCATGAAAACCCCAAGAT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTCAAGCTGTGCCGTTTaGTCAGGTGAGAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHSSCAV*SGESCR
Trigger: TCTGCAGCTCTCACCTGAGCAAACGGCACAGCTTGA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGTGGGCTATGATACCTaGAGCAAAATAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDVGYDT*SKIADF
Trigger: GAAGTCAGCTATTTTGCTGCAGGTATCATAGCCCAC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCCAATTCTGTATGGTTaGATGCAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLPILYG*MQILEK
Trigger: CTTCTCCAAGATCTGCATGCAACCATACAGAATTGG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGACATTTTGCAGTATTTaGTGGGATTTTTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLTFCSI*WDFYCR
Trigger: TCTGCAGTAAAAATCCCAGCAAATACTGCAAAATGT...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATGGGGTTGCCTCACTGTaGTCCTGGATATCACACAAA +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDGVASL*SWISHK
Trigger: TTTGTGTGATATCCAGGAGCACAGTGAGGCAACCCC...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACATCCAGAATGGAGGCTaGAATCTGCTGTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDIQNGG*NLLCFG
Trigger: CCCAAAGCACAGCAGATTGCAGCCTCCATTCTGGAT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACAACACTGTCTGCAAATaGCTAAGTCCCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHNTVCK*LSPTTP
Trigger: GGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCATCTAAACACTGTCTaGAAATGCCTAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDHLNTV*KCLSPT
Trigger: GGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCTCCTCCAGCAACCTTaGCAAGTCATCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHLLQQP*QVITLR
Trigger: TCTCAGGGTGATGACTTGGCAAGGTTGCTGGAGGAG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCACTCGCAAATCCAATaGGTGATTCCTCATTCCTAT +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLHSQIQ*VIPHSY
Trigger: ATAGGAATGAGGAATCACCCATTGGATTTGCGAGTG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCCAGAGCTGAACCTCTaGTTGAGAGAAGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDPELNL*LREVAK
Trigger: CTTGGCAACTTCTCTCAACCAGAGGTTCAGCTCTGG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGCAAATTCTGCTTATCTaGTTGGACTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKQILLI*LDSGNS
Trigger: ACTATTACCAGAGTCCAACCAGATAAGCAGAATTTG...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATTCAGATAGTGCATTGTaGGAGACTTCAATCGATCCT +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDSDSAL*ETSIDP
Trigger: AGGATCGATTGAAGTCTCTCACAATGCACTATCTGA...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGACTGCAAGAATTTGTaGTTTGGTCATGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDDCKNL*FGHGQA
Trigger: TGCCTGGCCATGACCAAATCACAAATTCTTGCAGTC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCGCAAATCCAATGGGTaGTTCCTCATTCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDRKSNG*FLIPIA
Trigger: GGCTATAGGAATGAGGAATCACCCATTGGATTTGCG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGTCTCCAAGACTTGGATaGAGATTTGCAATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKSPRLG*RFAILD
Trigger: ATCAAGGATTGCAAATCTTCATCCAAGTCTTGGAGA...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGTCTCCAAGACTTGGATaGAGATTTGCAATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLSPRLG*RFAILD
Trigger: ATCAAGGATTGCAAATCTTCATCCAAGTCTTGGAGA...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGACTCACAAACTCCAATaGCAACTGATGTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLTHKLQ*QLMCNY
Trigger: GTAATTGCACATCAGTTGTCATTGGAGTTTGTGAGT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCTGATCTCGAACTCCTaGGTTCAGACAATCCACCTG +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHLISNS*VQTIHL
Trigger: CAGGTGGATTGTCTGAACTCAGGAGTTCGAGATCAG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCTGATAACAATGCTCTaGGGTACTAGAACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDLITML*GTRTQV
Trigger: GACCTGGGTTCTAGTACCTCAGAGCATTGTTATCAG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACAATAGTCCCACAAATTaGATGGCAGGCCGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHNSPTN*MAGRSR
Trigger: ACGACTGCGGCCTGCCATGCAATTTGTGGGACTATT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGCAACCCTCAAGCCTTaGTTTGTAGTAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDATLKP*FVVKKS
Trigger: TGACTTCTTTACTACAAAGCAAGGCTTGAGGGTTGC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAGAGGTGACACTCACTaGCATTGTTTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDRGDTH*HCLHLG
Trigger: CCCAAGATGCAAACAATGGCAGTGAGTGTCACCTCT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAGTAAACTGTTGATATaGTTCAGCACATCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYSKLLI*FSTSSV
Trigger: GACCGAAGATGTGCTGAAGCATATCAACAGTTTACT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGAGTAAACTGTTGATATaGTTCAGCACATCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKSKLLI*FSTSSV
Trigger: GACCGAAGATGTGCTGAAGCATATCAACAGTTTACT...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCTGGTTGAGAGAAGTTaGCAAGGAGCGGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDLVERS*QGAGKM
Trigger: CATTTTTCCCGCTCCTTGGCAACTTCTCTCAACCAG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAGGGGTTGCCTCACTGTaGTCCTGGATATCACACAAA +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLGVASL*SWISHK
Trigger: TTTGTGTGATATCCAGGAGCACAGTGAGGCAACCCC...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACATCCAGAATGGAGGCTaGAATCTGCTGTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHIQNGG*NLLCFG
Trigger: CCCAAAGCACAGCAGATTGCAGCCTCCATTCTGGAT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGTTTGTGATTTGGTCATaGCCAGGCATTTCAGATAGT +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKFVIWS*PGISDS
Trigger: ACTATCTGAAATGCCTGGCCATGACCAAATCACAAA...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCCATTGTTTGCATCTTaGGGTTTTCATGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYPLFAS*GFHAYR
Trigger: TCTGTAAGCATGAAAACCCCAAGATGCAAACAATGG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACAAATCTGACTCATACTaGCTCCTCCAGCAACCTTGC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDKSDSY*LLQQPC
Trigger: GCAAGGTTGCTGGAGGAGCCAGTATGAGTCAGATTT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHSASEI*LILAPP
Trigger: TGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCGCAAATCCAATGGGTaGTTCCTCATTCCTATAGCC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHRKSNG*FLIPIA
Trigger: GGCTATAGGAATGAGGAATCACCCATTGGATTTGCG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTGGAAGAGAGCTCTCTaGCTTCTGCTATGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDWKRAL*LLLCCS
Trigger: TGAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCA...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCTGCAGCAAAATAGCTaGCTTCCATTTCCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHLQQNS*LPFPCY
Trigger: GTAGCAGGGAAATGGAAGTCAGCTATTTTGCTGCAG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCCAGAGTCCACGGTTTaGGTCTTCAAAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHPESTV*VFKIAA
Trigger: AGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACACCCCTCTATTCATTTaGGATGAGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDTPLFI*DEVSLC
Trigger: ACAGAGTGAGACCTCATCTCAAATGAATAGAGGGGT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAGGTAAGAAAACTCCGTaGACTCTCTGGCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLGKKTP*TLWQSL
Trigger: GAGACTTTGCCAGAGAGTTCACGGAGTTTTCTTACC...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCTCACTGCCATTGTTTaGATCTTGGGGTTTTCATGC +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDLTAIV*ILGFSC
Trigger: GCATGAAAACCCCAAGATGCAAACAATGGCAGTGAG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATAGTAAACTGTTGATATaGTTCAGCACATCTTCGGTC +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDSKLLI*FSTSSV
Trigger: GACCGAAGATGTGCTGAAGCATATCAACAGTTTACT...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGTGGGCTATGATACCTaGAGCAAAATAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDVGYDT*SKIADF
Trigger: GAAGTCAGCTATTTTGCTGCAGGTATCATAGCCCAC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACTGATGTGCAATTACTaGCAGGGCAGAACACCTGAC +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGLMCNY*QGRTPD
Trigger: GTCAGGTGTTCTGCCCTGGCAGTAATTGCACATCAG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACACTGGAGGTTTTGCTaGATCCACCTATTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGHWRFC*IHLLLQ
Trigger: CTGCAGCAATAGGTGGATCCAGCAAAACCTCCAGTG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTCTAACAGGAGACACTaGAGGTTTTGCTGGATCCAC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHSNRRH*RFCWIH
Trigger: GTGGATCCAGCAAAACCTCCAGTGTCTCCTGTTAGA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTCTGTGAACAGCCTGTaGAGGGCTTCCTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHSVNSL*RASFTK
Trigger: TTTTGTGAAGGAAGCCCTCCACAGGCTGTTCACAGA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATCCAGTCTTGGTAACTaGGAAACATTAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLSSLGN*ETLARS
Trigger: AGACCTGGCTAATGTTTCTCAGTTACCAAGACTGGA...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAAGCTAGGTCTGATTTaGGTTGCCTGTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDKLGLI*VACDQK
Trigger: TTTCTGATCACAGGCAACTCAAATCAGACCTAGCTT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGSASEI*LILAPP
Trigger: TGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACT...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAATGTCAGGTGGGCTATaGTACCTGCAGCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGMSGGL*YLQQNS
Trigger: GCTATTTTGCTGCAGGTATCATAGCCCACCTGACAT...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACAAGAGCACACACCTCTaGAATTCCTTAGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDKSTHL*NSLGSE
Trigger: TTCTGAACCTAAGGAATTTCAGAGGTGTGTGCTCTT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAAACTCCAATGACAACTaGTGTGCAATTACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLNSNDN*CAITAR
Trigger: CCTGGCAGTAATTGCACATCAGTTGTCATTGGAGTT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACAACTCCAATGACAACTaGTGTGCAATTACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHNSNDN*CAITAR
Trigger: CCTGGCAGTAATTGCACATCAGTTGTCATTGGAGTT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAGAATGAGTCCAACTTaGCTTGGGATTACAGCTATC +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDRMSPT*LGITAI
Trigger: GATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGAGCTCTCTGACTTCTaGTATGTTGTTCAAAAGACC +
Preference number: 4 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDELSDF*YVVQKT
Trigger: GGTCTTTTGAACAACATAGCAGAAGTCAGAGAGCTC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACTGGTTGAGAGAAGTTaGCAAGGAGCGGGAAAAATG +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGLVERS*QGAGKM
Trigger: CATTTTTCCCGCTCCTTGGCAACTTCTCTCAACCAG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATATACACAGCATGTCATaGTCACATAACAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDIHSMS*SHNRKH
Trigger: ATGTTTCCTGTTATGTGAGCATGACATGCTGTGTAT...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGAGATTTTAGCTTTTTaGATATTGACCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKEILAF*ILTSFS
Trigger: ACTGAAGCTGGTCAATATCCAAAAAGCTAAAATCTC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACCAATGACACAACATTaGGCAGGATATCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLPMTQH*AGYPSA
Trigger: AGCAGAAGGATATCCTGCCCAATGTTGTGTCATTGG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CCA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTTTTGCAGTATTTGCTaGGATTTTTACTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYFCSIC*DFYCRH
Trigger: ATGTCTGCAGTAAAAATCCCAGCAAATACTGCAAAA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCAAATTCTGCTTATCTaGTTGGACTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: VFKIAAERLQNESNLTWDQILLI*LDSGNS
Trigger: ACTATTACCAGAGTCCAACCAGATAAGCAGAATTTG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACGAAGACCAGTGAGCTaGCTAAAGAACAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLRRPVS*LKNSNL
Trigger: AAGATTACTGTTCTTTAGTCAGCTCACTGGTCTTCG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAACAATCAAAGGCCAATaGGACAGCCAACTCACAAAC +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGTIKGQ*DSQLTN
Trigger: GTTTGTGAGTTGGCTGTCTCATTGGCCTTTGATTGT...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAATCTTGGGGTTTTCATaGTTACAGAGCCATCTCATG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLILGFS*LQSHLM
Trigger: CATGAGATGGCTCTGTAAGCATGAAAACCCCAAGAT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTACCAATTCTGTATGGTTaGATGCAGATCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLPILYG*MQILEK
Trigger: CTTCTCCAAGATCTGCATGCAACCATACAGAATTGG...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCACTCGCAAATCCAATaGGTGATTCCTCATTCCTAT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHHSQIQ*VIPHSY
Trigger: ATAGGAATGAGGAATCACCCATTGGATTTGCGAGTG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAAGGTCTCCAAGACTTaGATGAAGATTTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDKVSKT*MKICNP
Trigger: AGGATTGCAAATCTTCATCCAAGTCTTGGAGACCTT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAAGTAATCTTGAATTTTaGGGGATGCTTGTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLSNLEF*GMLVES
Trigger: AGACTCGACAAGCATCCCTCAAAATTCAAGATTACT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR TCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATTCCTTCACAAAACATaGTCTGTTCCTGTATCGGCT +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGFLHKT*SVPVSA
Trigger: AGCCGATACAGGAACAGATCATGTTTTGTGAAGGAA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTACAGAGTAAACTGTTaGTATGCTTCAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDYRVNC*YASAHL
Trigger: AAGATGTGCTGAAGCATATCAACAGTTTACTCTGTA...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAACTCACAAACTCCAATaGCAACTGATGTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLTHKLQ*QLMCNY
Trigger: GTAATTGCACATCAGTTGTCATTGGAGTTTGTGAGT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATATACACAGCATGTCATaGTCACATAACAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDIHSMS*SHNRKH
Trigger: ATGTTTCCTGTTATGTGAGCATGACATGCTGTGTAT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCCATTGTTTGCATCTTaGGGTTTTCATGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHPLFAS*GFHAYR
Trigger: TCTGTAAGCATGAAAACCCCAAGATGCAAACAATGG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACAAGGTCTCCAAGACTTaGATGAAGATTTGCAATCCT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHKVSKT*MKICNP
Trigger: AGGATTGCAAATCTTCATCCAAGTCTTGGAGACCTT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATTCTGCTTATCTGGTTaGACTCTGGTAATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLFCLSG*TLVIVW
Trigger: CCAAACTATTACCAGAGTCCAACCAGATAAGCAGAA...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATCAAATTCTGCTTATCTaGTTGGACTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDQILLI*LDSGNS
Trigger: ACTATTACCAGAGTCCAACCAGATAAGCAGAATTTG...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
3UTR CAA 72 bp TGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTaGGACTCTGGTAATAGTTTGGAACATGGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: WKEVRLQILLIW*DSGNSLEHGLE
Trigger: CTCTAAACCATGTTCCAAACTATTACCAGAGTCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR TCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTACAGAGTAAACTGTTaGTATGCTTCAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHYRVNC*YASAHL
Trigger: AAGATGTGCTGAAGCATATCAACAGTTTACTCTGTA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATTGAATTTTGAGGGATaGTTGTCGAGTCTAACAGGA +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGLNFEG*LSSLTG
Trigger: TCCTGTTAGACTCGACAAGCATCCCTCAAAATTCAA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACATACACAGCATGTCATaGTCACATAACAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHIHSMS*SHNRKH
Trigger: ATGTTTCCTGTTATGTGAGCATGACATGCTGTGTAT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACCATTGTTTGCATCTTaGGGTTTTCATGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGPLFAS*GFHAYR
Trigger: TCTGTAAGCATGAAAACCCCAAGATGCAAACAATGG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACACATTTTGCAGTATTTaGTGGGATTTTTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHTFCSI*WDFYCR
Trigger: TCTGCAGTAAAAATCCCAGCAAATACTGCAAAATGT...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACTTTTGCAGTATTTGCTaGGATTTTTACTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHFCSIC*DFYCRH
Trigger: ATGTCTGCAGTAAAAATCCCAGCAAATACTGCAAAA...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR GCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAACATTTTGCAGTATTTaGTGGGATTTTTACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGTFCSI*WDFYCR
Trigger: TCTGCAGTAAAAATCCCAGCAAATACTGCAAAATGT...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CCA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATTTTGCAGTATTTGCTaGGATTTTTACTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGFCSIC*DFYCRH
Trigger: ATGTCTGCAGTAAAAATCCCAGCAAATACTGCAAAA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp CGCGCCCACCACGCCTGCGAGGCACACGGAGCTAGCGCCGCGCCCTaGCGGCGAGCTTTTGAAATGCCCGGCGAGGCGACGCGCACGCGG +
Preference number: 5 (lower is better)
Translates to: RAHHACEAHGASAAP*RRAFEMPGEATRTR
Trigger: CCGCGTGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp GGCGTCGAGCCGGAGCCCGGATCCCGCGAGAACCAAGCGGGCGGCTaGCAGGACGCGCCCACCACGCCTGCGAGGCACACGGAGCTAGCG +
Preference number: 5 (lower is better)
Translates to: GVEPEPGSRENQAGG*QDAPTTPARHTELA
Trigger: CGCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCGTCCTGGCAGCCGCCCGCTTGGTTCTCGCGGGATCCGGGCTCCGGCTCGACGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp CCGCGAGAACCAAGCGGGCGGCTGCCAGGACGCGCCCACCACGCCTaGGAGGCACACGGAGCTAGCGCCGCGCCCTGCCGGCGAGCTTTT +
Preference number: 5 (lower is better)
Translates to: PREPSGRLPGRAHHA*EAHGASAAPCRRAF
Trigger: AAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTCCGTGTGCCTCGCAGGCGTGGTGGGCGCGTCCTGGCAGCCGCCCGCTTGGTTCTCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp GGAGATGCCTCTTCCTGTACCACGCAGCAGCCCAGGGCATCCTTCTaGGCGTCAGGAGGGACGATGTTCCGGGGCGTGTGGCCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GDASSCTTQQPRASF*ASGGTMFRGVWPGC
Trigger: GCACCCGGGCCACACGCCCCGGAACATCGTCCCTCCTGACGCTCAGAAGGATGCCCTGGGCTGCTGCGTGGTACAGGAAGAGGCATCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAGCTGTGCTTTGGGGGTaGCCTCACTGTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRAVLWG*PHCAPG
Trigger: TCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAGC...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCCTGCCGGCGAGCTTTaGAAATGCCCGGCGAGGCGA +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYPAGEL*KCPARR
Trigger: TCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGGTTGCATGCAGATCTaGGAGAAGAGTACGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLGCMQI*EKSTPL
Trigger: CAGAGGCGTACTCTTCTCCAAGATCTGCATGCAACC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGGCAGAACACCTGACATaGAGGAAGAGCACACACCTC +
Preference number: 5 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLAEHLT*RKSTHL
Trigger: GAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGC...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGTCTTCGGTCACCAGCTaGGAAGAGAGCTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLSSVTS*EESSLT
Trigger: AGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGA...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGGAGCTGAACCTCTGGTaGAGAGAAGTTGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLELNLW*REVAKE
Trigger: CTCCTTGGCAACTTCTCTCAACCAGAGGTTCAGCTC...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGGCAGAACACCTGACATaGAGGAAGAGCACACACCTC +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLAEHLT*RKSTHL
Trigger: GAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGC...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGCGGAGTTTTACCACGTaGGCAAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLRSFTT*ARLISN
Trigger: GTTCGAGATCAGCCTTGCCAACGTGGTAAAACTCCG...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp ACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTaGAATTCCTTAGGTTCAGAAGGGCATTTGACACAGAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: TARAEHLTLRKSTHL*NSLGSEGHLTQSGP
Trigger: AGGCCCACTCTGTGTCAAATGCCCTTCTGAACCTAAGGAATTTCAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATCTTCGGTCACCAGCTaGGAAGAGAGCTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRSSVTS*EESSLT
Trigger: AGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAGGTTGCATGCAGATCTaGGAGAAGAGTACGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRGCMQI*EKSTPL
Trigger: CAGAGGCGTACTCTTCTCCAAGATCTGCATGCAACC...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGCAATCTGCTGTGCTTaGGGGGTTGCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKAICCA*GVASLC
Trigger: GCACAGTGAGGCAACCCCCAAAGCACAGCAGATTGC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACGGAGTTTTACCACGTaGGCAAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRRSFTT*ARLISN
Trigger: GTTCGAGATCAGCCTTGCCAACGTGGTAAAACTCCG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGCTCCTCCAGCAACCTaGCCAAGTCATCACCCTGAG +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKAPPAT*PSHHPE
Trigger: CTCAGGGTGATGACTTGGCAAGGTTGCTGGAGGAGC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGGCTCCTCCAGCAACCTaGCCAAGTCATCACCCTGAG +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLAPPAT*PSHHPE
Trigger: CTCAGGGTGATGACTTGGCAAGGTTGCTGGAGGAGC...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp GCAGAGTCCACTTATGATGTCTGGAACTGGGAGGTCAGCGTGCACTaGAGTAGCATTCAGTTCAATGAGCTTATGACGGCAGAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: AESTYDVWNWEVSVH*SSIQFNELMTAEGF
Trigger: AAAGCCTTCTGCCGTCATAAGCTCATTGAACTGAATGCTACTGCAGTGCACGCTGACCTCCCAGTTCCAGACATCATAAGTGGACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS CCA 90 bp CTGGATCCACCTATTGCTGCAGAGTCCACTTATGATGTCTGGAACTaGGAGGTCAGCGTGCACTGCAGTAGCATTCAGTTCAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: LDPPIAAESTYDVWN*EVSVHCSSIQFNEL
Trigger: AAGCTCATTGAACTGAATGCTACTGCAGTGCACGCTGACCTCCCAGTTCCAGACATCATAAGTGGACTCTGCAGCAATAGGTGGATCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGCAATCTGCTGTGCTTaGGGGGTTGCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDAICCA*GVASLC
Trigger: GCACAGTGAGGCAACCCCCAAAGCACAGCAGATTGC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGGGTTCAGAAGGGCATTaGACACAGAGTGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLGSEGH*TQSGPL
Trigger: CAGAGGCCCACTCTGTGTCAAATGCCCTTCTGAACC...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGGTTCAGAAGGGCATTaGACACAGAGTGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKGSEGH*TQSGPL
Trigger: CAGAGGCCCACTCTGTGTCAAATGCCCTTCTGAACC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp AAGAAGTCAGAAGAGCCAGCATCCGTGGCCAATAGTCCCACAAATTaGATGGCAGGCCGCAGTCGTATAAACAGTTCTACAGCTTCATCA +
Preference number: 5 (lower is better)
Translates to: KKSEEPASVANSPTN*MAGRSRINSSTASS
Trigger: TGATGAAGCTGTAGAACTGTTTATACGACTGCGGCCTGCCATGCAATTTGTGGGACTATTGGCCACGGATGCTGGCTCTTCTGACTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGTCAGTCAGCTTGCCTaGCCAAGTCATCACCCTGAG +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDVSQLA*PSHHPE
Trigger: CTCAGGGTGATGACTTGGCAAGGCAAGCTGACTGAC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CAAGCTCCCAGGCCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGTCATCAGTGATGCAATaGCCCCCAGAAATATCCAAT +
Preference number: 5 (lower is better)
Translates to: QAPRPSQSPRFESSKLLLSSVMQ*PPEISN
Trigger: ATTGGATATTTCTGGGGGCAATTGCATCACTGATGA...CAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGGCCTGGGAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACCCCTGGCGTGTTAGGTaGAGAGCGCAAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDPWRVR*RAQALA
Trigger: AGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGGG...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGGTTGCATGCAGATCTaGGAGAAGAGTACGCCTCTG +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKGCMQI*EKSTPL
Trigger: CAGAGGCGTACTCTTCTCCAAGATCTGCATGCAACC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACGCTGTGCTTTGGGGGTaGCCTCACTGTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDAVLWG*PHCAPG
Trigger: TCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAGC...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGGTTCAGAAGGGCATTaGACACAGAGTGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDGSEGH*TQSGPL
Trigger: CAGAGGCCCACTCTGTGTCAAATGCCCTTCTGAACC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCGGAGTTTTACCACGTaGGCAAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYRSFTT*ARLISN
Trigger: GTTCGAGATCAGCCTTGCCAACGTGGTAAAACTCCG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACCTGCCGGCGAGCTTTaGAAATGCCCGGCGAGGCGA +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGPAGEL*KCPARR
Trigger: TCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp AGAGCGCAAGCACTGGCTGTGAACTGCACTCGCAAATCCAATGGGTaGTTCCTCATTCCTATAGCCACAAGCTTTAAAATAGCAGGCATG +
Preference number: 5 (lower is better)
Translates to: RAQALAVNCTRKSNG*FLIPIATSFKIAGM
Trigger: CATGCCTGCTATTTTAAAGCTTGTGGCTATAGGAATGAGGAATCACCCATTGGATTTGCGAGTGCAGTTCACAGCCAGTGCTTGCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp ACAAAACATGATCTGTTCCTGTATCGGCTCAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCAGCAACCTTGCCAAGTCATCACCCT +
Preference number: 5 (lower is better)
Translates to: TKHDLFLYRLSASEI*LILAPPATLPSHHP
Trigger: AGGGTGATGACTTGGCAAGGTTGCTGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGATACAGGAACAGATCATGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 90 bp CTGATAATTCATGAAATGCATTCTGAAGTCATCCAGAATGGAGGCTaGAATCTGCTGTGCTTTGGGGGTTGCCTCACTGTGCTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: LIIHEMHSEVIQNGG*NLLCFGGCLTVLLD
Trigger: ATCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAGCAGATTGCAGCCTCCATTCTGGATGACTTCAGAATGCATTTCATGAATTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGTTCTGTCAGTCAGCTaGCCTTGCCAAGTCATCACC +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDVLSVS*PCQVIT
Trigger: GGTGATGACTTGGCAAGGCAAGCTGACTGACAGAAC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACAGCTTCAGTTTCATTaGGTTGCCTCGGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRQLQFH*VASENA
Trigger: AGCATTTTCCGAGGCAACCAAATGAAACTGAAGCTG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAAATTTTGAGGGATGCTaGTCGAGTCTAACAGGAGAC +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRNFEGC*SSLTGD
Trigger: GTCTCCTGTTAGACTCGACAAGCATCCCTCAAAATT...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACATCTCATGACAAACTaGGCAGCATCAAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRHLMTN*AASNLS
Trigger: TGACAGGTTTGATGCTGCCAAGTTTGTCATGAGATG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAGCCAATTCTGTATGGTaGCATGCAGATCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRANSVW*HADLGE
Trigger: TTCTCCAAGATCTGCATGCAACCATACAGAATTGGC...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGAGCTGAACCTCTGGTaGAGAGAAGTTGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDELNLW*REVAKE
Trigger: CTCCTTGGCAACTTCTCTCAACCAGAGGTTCAGCTC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAGCTGTGCTTTGGGGGTaGCCTCACTGTGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLAVLWG*PHCAPG
Trigger: TCCAGGAGCACAGTGAGGCAACCCCCAAAGCACAGC...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp GGGAGGTCAGCGTGCACTGCAGTAGCATTCAGTTCAATGAGCTTATaGCGGCAGAAGGCTTTTATGAATGCAGCTGTAGAGATTTTAGCT +
Preference number: 5 (lower is better)
Translates to: GRSACTAVAFSSMSL*RQKAFMNAAVEILA
Trigger: AGCTAAAATCTCTACAGCTGCATTCATAAAAGCCTTCTGCCGTCATAAGCTCATTGAACTGAATGCTACTGCAGTGCACGCTGACCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS TCA 90 bp ACAAAACATGATCTGTTCCTGTATCGGCTCAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCAGCAACCCTCAAGCCTTGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: TKHDLFLYRLSASEI*LILAPPATLKPCFV
Trigger: TACAAAGCAAGGCTTGAGGGTTGCTGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGATACAGGAACAGATCATGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGAGACACTGGAGGTTTaGCTGGATCCACCTATTGCT +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDETLEV*LDPPIA
Trigger: AGCAATAGGTGGATCCAGCAAAACCTCCAGTGTCTC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGACCCTGGCGTGTTAGGTaGAGAGCGCAAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGPWRVR*RAQALA
Trigger: AGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGGG...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGAAATTTTTCAGAGCCTaGAAAAGTAGACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLKFFRA*KSRQVT
Trigger: GGTCACCTGTCTACTTTTCAAGGCTCTGAAAAATTT...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGTCTTACAACTTGAACTaGGCCAATTCTGTATGGTTG +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLSYNLN*ANSVWL
Trigger: CAACCATACAGAATTGGCCAAGTTCAAGTTGTAAGA...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTTTGAGTCTTCAAAATaGCTGCTGAAAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKFESSK*LLKGCR
Trigger: TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAA...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCCCAGAGTCCACGGTTaGAGTCTTCAAAATTGCTGC +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDPRVHG*SLQNCC
Trigger: GCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGAAATTTTTCAGAGCCTaGAAAAGTAGACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: GKEGIHTIPQSSSARLIKKFFRA*KSRQVT
Trigger: GGTCACCTGTCTACTTTTCAAGGCTCTGAAAAATTT...CTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCATCTCATGACAAACTaGGCAGCATCAAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLHLMTN*AASNLS
Trigger: TGACAGGTTTGATGCTGCCAAGTTTGTCATGAGATG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGCCATTGTTTGCATCTaGGGGTTTTCATGCTTACAG +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYAIVCI*GFSCLQ
Trigger: CTGTAAGCATGAAAACCCCAAGATGCAAACAATGGC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAGTACTTTGCTTTGTATaGCTGACTCTGAAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRVLCFV*LTLKRS
Trigger: AGACCTTTTCAGAGTCAGCAATACAAAGCAAAGTAC...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp TGCAATTACTGCCAGGGCAGAACACCTGACATTGAGGAAGAGCACACACCTCTGAAAAGACCAAGTACTTaGCTTTGTATTGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: CNYCQGRTPDIEEEHTPLKRPST*LCIADS
Trigger: AGAGTCAGCAATACAAAGCAAAGTACTTGGTCTTTT...CAGAGGTGTGTGCTCTTCCTCAATGTCAGGTGTTCTGCCCTGGCAGTAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTCTTCGGTCACCAGCTaGGAAGAGAGCTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDSSVTS*EESSLT
Trigger: AGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGA...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGACTACAGAGTAAACTGTaGATATGCTTCAGCACATCT +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRLQSKL*ICFSTS
Trigger: AGATGTGCTGAAGCATATCAACAGTTTACTCTGTAG...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGCCAATTCTGTATGGTaGCATGCAGATCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYANSVW*HADLGE
Trigger: TTCTCCAAGATCTGCATGCAACCATACAGAATTGGC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGGCCAATTCTGTATGGTaGCATGCAGATCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKANSVW*HADLGE
Trigger: TTCTCCAAGATCTGCATGCAACCATACAGAATTGGC...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATGAGCTGAACCTCTGGTaGAGAGAAGTTGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDELNLW*REVAKE
Trigger: CTCCTTGGCAACTTCTCTCAACCAGAGGTTCAGCTC...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAGCAATCTGCTGTGCTTaGGGGGTTGCCTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGAICCA*GVASLC
Trigger: GCACAGTGAGGCAACCCCCAAAGCACAGCAGATTGC...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATGTCTTCCTACCATTTTaGGTCATGGTTCCACCCAAA +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYVFLPF*VMVPPK
Trigger: TTTGGGTGGAACCATGACCAAAAATGGTAGGAAGAC...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATTCTGCTTATCTGGTaGGACTCTGGTAATAGTTTG +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRILLIW*DSGNSL
Trigger: CAAACTATTACCAGAGTCCAACCAGATAAGCAGAAT...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGCAAGAATTTGTGATTaGGTCATGGCCAGGCATTTC +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDARICD*VMARHF
Trigger: GAAATGCCTGGCCATGACCAAATCACAAATTCTTGC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATCATCTCATGACAAACTaGGCAGCATCAAACCTGTCA +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDHLMTN*AASNLS
Trigger: TGACAGGTTTGATGCTGCCAAGTTTGTCATGAGATG...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAGAATGAGTCCAACTaGACTTGGGATTACAGCTAT +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYQNESN*TWDYSY
Trigger: ATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTG...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCCTACAAGCAGAATGAGTCCAACTaGACTTGGGATTACAGCTAT +
Preference number: 5 (lower is better)
Translates to: IFHLNTVCKCLSPTTPYKQNESN*TWDYSY
Trigger: ATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTG...CTTGTAGGGCGTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATTTTGAGTCTTCAAAATaGCTGCTGAAAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYFESSK*LLKGCR
Trigger: TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAA...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTTCCCAGAGTCCACGGTTTGAGTCTTCAAAATTGCTGCTGAAAGGCTGCAGATCTAAACACTACATTTaGAAGCATATGCTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PSQSPRFESSKLLLKGCRSKHYI*KHMLPK
Trigger: CTTGGGAAGCATATGCTTCAAAATGTAGTGTTTAGA...TCTGCAGCCTTTCAGCAGCAATTTTGAAGACTCAAACCGTGGACTCTGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATGCTGGATCCACCTATaGCTGCAGAGTCCACTTATG +
Preference number: 5 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLCWIHL*LQSPLM
Trigger: CATAAGTGGACTCTGCAGCAATAGGTGGATCCAGCA...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGCTACAGAGTAAACTGTaGATATGCTTCAGCACATCT +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLLQSKL*ICFSTS
Trigger: AGATGTGCTGAAGCATATCAACAGTTTACTCTGTAG...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGATTCTGCTTATCTGGTaGGACTCTGGTAATAGTTTG +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLILLIW*DSGNSL
Trigger: CAAACTATTACCAGAGTCCAACCAGATAAGCAGAAT...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAGAGATTTTAGCTTTTaGGATATTGACCAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYRDFSF*DIDQLQ
Trigger: CTGAAGCTGGTCAATATCCAAAAAGCTAAAATCTCT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATCCAATGACACAACATaGGGCAGGATATCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLSNDTT*GRISFC
Trigger: GCAGAAGGATATCCTGCCCAATGTTGTGTCATTGGA...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp CTTCCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATAGCAACCCTCAAGCCTaGCTTTGTAGTAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LPTIFGHGSTQIKWRDSDSNPQA*LCSKEV
Trigger: GACTTCTTTACTACAAAGCAAGGCTTGAGGGTTGCT...ATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATGTACTTTGCTTTGTATaGCTGACTCTGAAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDVLCFV*LTLKRS
Trigger: AGACCTTTTCAGAGTCAGCAATACAAAGCAAAGTAC...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATAAGGCAAGGAAGGAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATAAAAGACCAAGTACTTaGCTTTGTATTGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: IRQGRNSHYSSEQLRKAYKRPST*LCIADS
Trigger: AGAGTCAGCAATACAAAGCAAAGTACTTGGTCTTTT...ATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTCCTTCCTTGCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GTCTTCAAAATTGCTGCTGAAAGGCTGCAGAATGAGTCCAACTTGACTTGGGATTCTTACAACTTGAACTaGGCCAATTCTGTATGGTTG +
Preference number: 5 (lower is better)
Translates to: VFKIAAERLQNESNLTWDSYNLN*ANSVWL
Trigger: CAACCATACAGAATTGGCCAAGTTCAAGTTGTAAGA...ATCCCAAGTCAAGTTGGACTCATTCTGCAGCCTTTCAGCAGCAATTTTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp GAATTCACACTATTCCTCAGAGCAGCTCCGCAAGGCTTATCAAGTAAGCTTCTGTCTAAACACTACATTTaGAAGCATATGCTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: EFTLFLRAAPQGLSSKLLSKHYI*KHMLPK
Trigger: CTTGGGAAGCATATGCTTCAAAATGTAGTGTTTAGA...CAGAAGCTTACTTGATAAGCCTTGCGGAGCTGCTCTGAGGAATAGTGTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGCCATTGTTTGCATCTaGGGGTTTTCATGCTTACAG +
Preference number: 5 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHAIVCI*GFSCLQ
Trigger: CTGTAAGCATGAAAACCCCAAGATGCAAACAATGGC...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 90 bp AAGGTGAAGCAGACATTTAAGTTCTCTAATGACTGCAAGAATTTGTaGTTTGGTCATGGCCAGGCATTTCAGATAGTGCATTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: KVKQTFKFSNDCKNL*FGHGQAFQIVHCER
Trigger: TCTCTCACAATGCACTATCTGAAATGCCTGGCCATGACCAAATCACAAATTCTTGCAGTCATTAGAGAACTTAAATGTCTGCTTCACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATTCAGTTTCATTTGGTaGCCTCGGAAAATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGFSFIW*PRKMLA
Trigger: AGCCAGCATTTTCCGAGGCAACCAAATGAAACTGAA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS-3UTR CAA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACCAGAATGAGTCCAACTaGACTTGGGATTACAGCTAT +
Preference number: 5 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHQNESN*TWDYSY
Trigger: ATAGCTGTAATCCCAAGTCAAGTTGGACTCATTCTG...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAGTCTTCCTACCATTTTaGGTCATGGTTCCACCCAAA +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGVFLPF*VMVPPK
Trigger: TTTGGGTGGAACCATGACCAAAAATGGTAGGAAGAC...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CTGTTAAGTGAGGAAAATAAAACTCACCTACCCGTGAGGATTGTTGTGAATGACATTCTGCTTATCTGGTaGGACTCTGGTAATAGTTTG +
Preference number: 5 (lower is better)
Translates to: LLSEENKTHLPVRIVVNDILLIW*DSGNSL
Trigger: CAAACTATTACCAGAGTCCAACCAGATAAGCAGAAT...GTCATTCACAACAATCCTCACGGGTAGGTGAGTTTTATTTTCCTCACTTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp ATTACATGTAATCTTTCATCTAAACACTGTCTGCAAATGCCTAAGTCCCACCACGTACTTTGCTTTGTATaGCTGACTCTGAAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: ITCNLSSKHCLQMPKSHHVLCFV*LTLKRS
Trigger: AGACCTTTTCAGAGTCAGCAATACAAAGCAAAGTAC...GTGGTGGGACTTAGGCATTTGCAGACAGTGTTTAGATGAAAGATTACATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTATCTTACAACTTGAACTaGGCCAATTCTGTATGGTTG +
Preference number: 5 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLSYNLN*ANSVWL
Trigger: CAACCATACAGAATTGGCCAAGTTCAAGTTGTAAGA...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGAAAATTTTTCAGAGCCTaGAAAAGTAGACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGKFFRA*KSRQVT
Trigger: GGTCACCTGTCTACTTTTCAAGGCTCTGAAAAATTT...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp CCTACCATTTTTGGTCATGGTTCCACCCAAATAAAATGGAGGGATTCAGATTTAAAAAGACCAAGTACTTaGCTTTGTATTGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: PTIFGHGSTQIKWRDSDLKRPST*LCIADS
Trigger: AGAGTCAGCAATACAAAGCAAAGTACTTGGTCTTTT...TAAATCTGAATCCCTCCATTTTATTTGGGTGGAACCATGACCAAAAATGGTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS-3UTR CAA 90 bp AGTTTAAGGACTATGGAAGGAAGTAAGGTTACAAATTCTGCTTATCTGGTTGGATCTAAACACTACATTTaGAAGCATATGCTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SLRTMEGSKVTNSAYLVGSKHYI*KHMLPK
Trigger: CTTGGGAAGCATATGCTTCAAAATGTAGTGTTTAGA...TCCAACCAGATAAGCAGAATTTGTAACCTTACTTCCTTCCATAGTCCTTAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 90 bp CCTGCGAGGCACACGGAGCTAGCGCCGCGCCCTGCCGGCGAGCTTTaGAAATGCCCGGCGAGGCGACGCGCACGCGGGGGCCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: PARHTELAPRPAGEL*KCPARRRARGGRPA
Trigger: GGCGGGCCGGCCCCCGCGTGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTCCGTGTGCCTCGCAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 72 bp GAGCTAGCGCCGCGCCCTGCCGGCGAGCTTTTGAAATaGCCGGCGAGGCGACGCGCACGCGGGGGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: ELAPRPAGELLK*PARRRARGGRP
Trigger: GGGCCGGCCCCCGCGTGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 72 bp CCGGAGCCCGGATCCCGCGAGAACCAAGCGGGCGGCTaGCAGGACGCGCCCACCACGCCTGCGAGGCACACG +
Preference number: 6 (lower is better)
Translates to: PEPGSRENQAGG*QDAPTTPARHT
Trigger: CGTGTGCCTCGCAGGCGTGGTGGGCGCGTCCTGGCAGCCGCCCGCTTGGTTCTCGCGGGATCCGGGCTCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 72 bp CACACGGAGCTAGCGCCGCGCCCTGCCGGCGAGCTTTaGAAATGCCCGGCGAGGCGACGCGCACGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: HTELAPRPAGEL*KCPARRRARGG
Trigger: GCCCCCGCGTGCGCGTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTCCGTGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS GCA 72 bp CACGCCTGCGAGGCACACGGAGCTAGCGCCGCGCCCTaGCGGCGAGCTTTTGAAATGCCCGGCGAGGCGACG +
Preference number: 6 (lower is better)
Translates to: HACEAHGASAAP*RRAFEMPGEAT
Trigger: CGTCGCCTCGCCGGGCATTTCAAAAGCTCGCCGGCAGGGCGCGGCGCTAGCTCCGTGTGCCTCGCAGGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp TCTTCCTGTACCACGCAGCAGCCCAGGGCATCCTTCTaGGCGTCAGGAGGGACGATGTTCCGGGGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: SSCTTQQPRASF*ASGGTMFRGVW
Trigger: CCACACGCCCCGGAACATCGTCCCTCCTGACGCTCAGAAGGATGCCCTGGGCTGCTGCGTGGTACAGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 72 bp ACAGGCATCCCCTTGGCCAGGCCCTGGCGTGTTAGGTaGAGAGCGCAAGCACTGGCTGTGAACTGCACTCGC +
Preference number: 6 (lower is better)
Translates to: TGIPLARPWRVR*RAQALAVNCTR
Trigger: GCGAGTGCAGTTCACAGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGGGCCTGGCCAAGGGGATGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 90 bp AAAAGTAGACAGGTGACCTCTGACAACAGGCGAACAGGCATCCCCTaGGCCAGGCCCTGGCGTGTTAGGTTGAGAGCGCAAGCACTGGCT +
Preference number: 6 (lower is better)
Translates to: KSRQVTSDNRRTGIP*ARPWRVRLRAQALA
Trigger: AGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGGGCCTGGCCAAGGGGATGCCTGTTCGCCTGTTGTCAGAGGTCACCTGTCTACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp CAAGTCATCACCCTGAGAAATCGCTCGGCTACTTCCTaGGGGAAACTCCAATGCTCCGGAAGGCACAGTGTT +
Preference number: 6 (lower is better)
Translates to: QVITLRNRSATS*GKLQCSGRHSV
Trigger: AACACTGTGCCTTCCGGAGCATTGGAGTTTCCCTCAGGAAGTAGCCGAGCGATTTCTCAGGGTGATGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp GATCTGTTCCTGTATCGGCTCAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCAGCAACCCTCAAGCCT +
Preference number: 6 (lower is better)
Translates to: DLFLYRLSASEI*LILAPPATLKP
Trigger: AGGCTTGAGGGTTGCTGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGATACAGGAACAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS GCA 72 bp GAAGAGCCAGCATCCGTGGCCAATAGTCCCACAAATTaGATGGCAGGCCGCAGTCGTATAAACAGTTCTACA +
Preference number: 6 (lower is better)
Translates to: EEPASVANSPTN*MAGRSRINSST
Trigger: TGTAGAACTGTTTATACGACTGCGGCCTGCCATGCAATTTGTGGGACTATTGGCCACGGATGCTGGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS CCA 72 bp CCTATTGCTGCAGAGTCCACTTATGATGTCTGGAACTaGGAGGTCAGCGTGCACTGCAGTAGCATTCAGTTC +
Preference number: 6 (lower is better)
Translates to: PIAAESTYDVWN*EVSVHCSSIQF
Trigger: GAACTGAATGCTACTGCAGTGCACGCTGACCTCCCAGTTCCAGACATCATAAGTGGACTCTGCAGCAATAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS CCA 72 bp GATCCACCTATTGCTGCAGAGTCCACTTATGATGTCTaGAACTGGGAGGTCAGCGTGCACTGCAGTAGCATT +
Preference number: 6 (lower is better)
Translates to: DPPIAAESTYDV*NWEVSVHCSSI
Trigger: AATGCTACTGCAGTGCACGCTGACCTCCCAGTTCCAGACATCATAAGTGGACTCTGCAGCAATAGGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS CCA 72 bp TGTATCGGCTCAGTGCTTCTGAAATCTGACTCATACTaGCTCCTCCAGCAACCTTGCCAAGTCATCACCCTG +
Preference number: 6 (lower is better)
Translates to: CIGSVLLKSDSY*LLQQPCQVITL
Trigger: CAGGGTGATGACTTGGCAAGGTTGCTGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp GATCTGTTCCTGTATCGGCTCAGTGCTTCTGAAATCTaGCTCATACTGGCTCCTCCAGCAACCTTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: DLFLYRLSASEI*LILAPPATLPS
Trigger: ACTTGGCAAGGTTGCTGGAGGAGCCAGTATGAGTCAGATTTCAGAAGCACTGAGCCGATACAGGAACAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371532.5
ENST00000612017.4
CDS CCA 72 bp CCAGCTTCAGTTTCATTTGGTTGCCTCGGAAAATGCTaGCTGTTCTGTCAGTCAGCTTGCCTTGCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: PASVSFGCLGKC*LFCQSACLAKS
Trigger: TGACTTGGCAAGGCAAGCTGACTGACAGAACAGCCAGCATTTTCCGAGGCAACCAAATGAAACTGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS CAA 72 bp CTGTTGATATGCTTCAGCACATCTTCGGTCACCAGCTaGGAAGAGAGCTCTCTGACTTCTGCTATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LLICFSTSSVTS*EESSLTSAMLF
Trigger: GAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGATGTGCTGAAGCATATCAACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp GCACATCTTCGGTCACCAGCTTGGAAGAGAGCTCTCTaGCTTCTGCTATGTTGTTCAAAAGACCAAGTACTT +
Preference number: 6 (lower is better)
Translates to: AHLRSPAWKRAL*LLLCCSKDQVL
Trigger: AAGTACTTGGTCTTTTGAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS GCA 72 bp ACTTCCATTTCCCTGCTACAGAGTAAACTGTTGATATaGTTCAGCACATCTTCGGTCACCAGCTTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: TSISLLQSKLLI*FSTSSVTSLEE
Trigger: CTCTTCCAAGCTGGTGACCGAAGATGTGCTGAAGCATATCAACAGTTTACTCTGTAGCAGGGAAATGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 90 bp CAGAGTAAACTGTTGATATGCTTCAGCACATCTTCGGTCACCAGCTaGGAAGAGAGCTCTCTGACTTCTGCTATGTTGTTCAAAAGACCA +
Preference number: 6 (lower is better)
Translates to: QSKLLICFSTSSVTS*EESSLTSAMLFKRP
Trigger: TGGTCTTTTGAACAACATAGCAGAAGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGATGTGCTGAAGCATATCAACAGTTTACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS TCA 72 bp GCACTGGCTGTGAACTGCACTCGCAAATCCAATGGGTaGTTCCTCATTCCTATAGCCACAAGCTTTAAAATA +
Preference number: 6 (lower is better)
Translates to: ALAVNCTRKSNG*FLIPIATSFKI
Trigger: TATTTTAAAGCTTGTGGCTATAGGAATGAGGAATCACCCATTGGATTTGCGAGTGCAGTTCACAGCCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 72 bp GGGTTTTCATGCTTACAGAGCCATCTCATGACAAACTaGGCAGCATCAAACCTGTCAAATGGAACATCCACA +
Preference number: 6 (lower is better)
Translates to: GFSCLQSHLMTN*AASNLSNGTST
Trigger: TGTGGATGTTCCATTTGACAGGTTTGATGCTGCCAAGTTTGTCATGAGATGGCTCTGTAAGCATGAAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CAA 72 bp AGAATAGAGGTGACACTCACTGCCATTGTTTGCATCTaGGGGTTTTCATGCTTACAGAGCCATCTCATGACA +
Preference number: 6 (lower is better)
Translates to: RIEVTLTAIVCI*GFSCLQSHLMT
Trigger: TGTCATGAGATGGCTCTGTAAGCATGAAAACCCCAAGATGCAAACAATGGCAGTGAGTGTCACCTCTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371528.2
ENST00000371532.5
ENST00000612017.4
CDS CCA 72 bp TGCAATTGCCCCCAGAAATATCCAATGACACAACATTaGGCAGGATATCCTTCTGCTGTAGCAAATGAAAAG +
Preference number: 6 (lower is better)
Translates to: CNCPQKYPMTQH*AGYPSAVANEK
Trigger: CTTTTCATTTGCTACAGCAGAAGGATATCCTGCCCAATGTTGTGTCATTGGATATTTCTGGGGGCAATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371528.2
CDS TCA 72 bp CCTTCTGCTGTAGCAAATGAAAAGCTAGGTCTGATTTaGGTTGCCTGTGATCAGAAATATCAAGGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: PSAVANEKLGLI*VACDQKYQGEA
Trigger: TGCTTCACCTTGATATTTCTGATCACAGGCAACTCAAATCAGACCTAGCTTTTCATTTGCTACAGCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371528.2