RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZXDC (Homo sapiens)

Ensembl gene IDs: ENSG00000070476

Ensembl transcript IDs: ENST00000336332.5, ENST00000389709.8, ENST00000514463.1, ENST00000515545.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCAGCTGGACCTGGACGCCCTGCGCCCCGCACTGCACCCCAGCTaGTGGAGCTGGTCCTGGCCGTCCTCCGCTGGGCACCACGAGGCT +
Preference number: 1 (lower is better)
Translates to: HQLDLDALRPALHPS*WSWSWPSSAGHHEA
Trigger: AGCCTCGTGGTGCCCAGCGGAGGACGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR GCA 90 bp TGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGTCACTGCAGATCCTaGAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGTCCA +
Preference number: 1 (lower is better)
Translates to: WPWACPGRGCRHCRS*RLIVLPGNWVASGP
Trigger: TGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCGGCCTGGGCAGGCCCAAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR GCA 90 bp CCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGTCACTaGAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCC +
Preference number: 1 (lower is better)
Translates to: PRPWPWACPGRGCRH*RSCRLIVLPGNWVA
Trigger: GGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR CCA 90 bp TGCCGTCACTGCAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTaGGTGGCCTCCGGTCCAGCAGGGCCTCCAGATGAGGGGAGCACC +
Preference number: 1 (lower is better)
Translates to: CRHCRSCRLIVLPGN*VASGPAGPPDEGST
Trigger: GGTGCTCCCCTCATCTGGAGGCCCTGCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGACGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR GCA 90 bp AAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTaGCGTCACTGCAGATCCTGCAGGTTGATAGTGCTTCCTGGGAAC +
Preference number: 1 (lower is better)
Translates to: KVCPRPWPWACPGRG*RHCRSCRLIVLPGN
Trigger: GTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR CCA 90 bp AACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATaGAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAA +
Preference number: 1 (lower is better)
Translates to: NITKPPIFKERSTLP*SHRTPKDLRKHLAK
Trigger: TTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
3UTR-3UTR CCA 90 bp CCGGTCCAGCAGGGCCTCCAGATGAGGGGAGCACCTCCTGGAGGACGTAGACGGCCTAGACCGTGGCCTTaGGCCTGCCCAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: PVQQGLQMRGAPPGGRRRPRPWP*ACPGRG
Trigger: GCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGG...CCGTCTACGTCCTCCAGGAGGTGCTCCCCTCATCTGGAGGCCCTGCTGGACCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR TCA 90 bp CCGGAGGGGTCATCCTGCACCAGCTGGACCTGGACGCCCTGCGCCCCGCACTGCCCCAGGCTCATGTCATaGGTCTCAGGGAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: PEGSSCTSWTWTPCAPHCPRLMS*VSGKVC
Trigger: ACACACCTTCCCTGAGACTCATGACATGAGCCTGGG...GCAGTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCAGGATGACCCCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR GCA 90 bp CCGGTCCAGCAGGGCCTCCAGATGAGGGGAGCACCTCCTGGAGGACGTAGACGGCCAACTGTTCTGGCTTaGATGGAAATGGGGAGGACT +
Preference number: 2 (lower is better)
Translates to: PVQQGLQMRGAPPGGRRRPTVLA*MEMGRT
Trigger: AGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGG...CCGTCTACGTCCTCCAGGAGGTGCTCCCCTCATCTGGAGGCCCTGCTGGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR TCA 90 bp CAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGTCCAGCTCTCTGAGTAGACTGTaGGGCTCCATGGAGCCACAG +
Preference number: 2 (lower is better)
Translates to: QILQVDSASWELGGLRSSSLSRL*GSMEPQ
Trigger: CTGTGGCTCCATGGAGCCTCACAGTCTACTCAGAGA...GCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCCTAGACCGTGGCCTTaGGCCTGCCCAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPPRPWP*ACPGRG
Trigger: GCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR-3UTR TCA 90 bp GAGCACCTCCTGGAGGACGTAGACGGGCAGGTCCACAGTGAGGAAGGGGAGGAAAGATCAAGCTGCATCTaGCTAGACAGCCTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: EHLLEDVDGQVHSEEGEERSSCI*LDSLFS
Trigger: AGAGAACAGGCTGTCTAGTCAGATGCAGCTTGATCT...TTCCTCCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR CCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGGTGCTTCCTGGGAACTaGGTGGCCTCCGGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: STLLTKAVSKSIARTHSWVLPGN*VASGPA
Trigger: TGCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCAC...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR TCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCCCAGGCTCATGTCATaGGTCTCAGGGAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPPRLMS*VSGKVC
Trigger: ACACACCTTCCCTGAGACTCATGACATGAGCCTGGG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR-3UTR GCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTGGGAGACCCTTGCCTTaGCAAAGCACTTTGCTCACA +
Preference number: 2 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSGRPLP*QSTLLT
Trigger: TGTGAGCAAAGTGCTTTGGCAAGGCAAGGGTCTCCC...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCTCAAAAGGGCTACGCTaGTCTTCTGAACGGAAACCA +
Preference number: 2 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPSKGLR*SSERKP
Trigger: TGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGA...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR-3UTR CCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTCAAAAGGGCTACGCTaGTCTTCTGAACGGAAACCA +
Preference number: 2 (lower is better)
Translates to: STLLTKAVSKSIARTHSWSKGLR*SSERKP
Trigger: TGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTTGGCTTGCATGGAAATaGGGAGGACTCATTTTGCCT +
Preference number: 2 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSWLAWK*GGLILP
Trigger: AGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCA...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR-3UTR CCA 90 bp GCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAAGGAGCACATTACCATaGAGCCACAGGACTCCAAAG +
Preference number: 2 (lower is better)
Translates to: ADKHRGKVSQHYKTPNLQRSTLP*SHRTPK
Trigger: CTTTGGAGTCCTGTGGCTCCATGGTAATGTGCTCCT...TTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
3UTR GCA 72 bp TGCACCAGCTGGACCTGGACGCCCTGCGCCCCGCACTaGACCCCAGCTGCTGGAGCTGGTCCTGGCCGTCCT +
Preference number: 3 (lower is better)
Translates to: CTSWTWTPCAPH*TPAAGAGPGRP
Trigger: AGGACGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR CCA 72 bp TGCAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTaGGTGGCCTCCGGTCCAGCAGGGCCTCCAGATGAG +
Preference number: 3 (lower is better)
Translates to: CRSCRLIVLPGN*VASGPAGPPDE
Trigger: CTCATCTGGAGGCCCTGCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR GCA 72 bp CACCACGAGGCTCCCACACAACCAACTGTTCTGGCTTaGATGGAAATGGGGAGGACTCATTTTGCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: HHEAPTQPTVLA*MEMGRTHFAFF
Trigger: AAAGAAGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
3UTR CCA 72 bp AAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATaGAGCCACAGGACTCCAAAGGACCTCAGAAAGCAT +
Preference number: 3 (lower is better)
Translates to: KPPIFKERSTLP*SHRTPKDLRKH
Trigger: ATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336332.5
3UTR-3UTR CAA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTTGTGGCAAAATCAACTaGCCCACAAACCCCATCCCA +
Preference number: 3 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSCGKIN*PTNPIP
Trigger: TGGGATGGGGTTTGTGGGCAAGTTGATTTTGCCACA...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCCTGGCCGTCCTCCGCTaGGCACCACGAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAALAVLR*APRGSH
Trigger: GTGGGAGCCTCGTGGTGCCCAGCGGAGGACGGCCAG...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CCGGAGGGGTCATCCTGCACCAGCTGGACCTGGACGCCCTGCGCCCCGCACTGCTCATCCTGCACCAGCTaGACCTGGACGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PEGSSCTSWTWTPCAPHCSSCTS*TWTPCA
Trigger: GGCGCAGGGCGTCCAGGTCCAGCTGGTGCAGGATGA...GCAGTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCAGGATGACCCCTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGCACTGCACCCCAGCTaGTGGAGCTGGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAALHPS*WSWSWP
Trigger: CGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAGTGC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGTGAGGCTCCTGCATTaGTCCCCGCTCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAVRLLH*SPLLSA
Trigger: AGCAGAGAGGAGCGGGGAGCAATGCAGGAGCCTCAC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGGGGGAATATCACTGTaGGCCACCAGGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAGGISL*ATRTRG
Trigger: ACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCACACTGAAGCTGCCCTaGTGCAGAACCGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAATLKLP*CRTVAA
Trigger: AGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGT...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGTTGATAGTGCTTCCTaGGAACTGGGTGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAVDSAS*ELGGLR
Trigger: CCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAAC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGTATGGCTCCGCAGGTaGATTTTCAGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAVWLRR*IFSRQA
Trigger: AGCCTGTCGGCTGAAAATTCACCTGCGGAGCCATAC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCCTCTGCTCTGGTGAATaGTTTCCCACAGCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAALCSGE*FPTALD
Trigger: GTCGAGGGCTGTGGGAAATCATTCACCAGAGCAGAG...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCCTCATCCGACCCACCTaGAGAACCACTAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAALIRPT*RTTSIG
Trigger: GCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAG...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGAAGTTGCCAGTGCCTaGACTGAGCTCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAEVASA*TELCVL
Trigger: CAGGACACAGAGCTCAGTGCAGGCACTGGCAACTTC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR CAA 72 bp CCAGGCCGAGGCTGCCGTCACTGCAGATCCTGCAGGTaGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PGRGCRHCRSCR*IVLPGNWVASG
Trigger: ACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCCGGGAGGTCCATCTTaGTCCCAGCGACGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEPGGPS*SQRRRR
Trigger: CCGACGCCGTCGCTGGGACCAAGATGGACCTCCCGG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CCA 90 bp TCCGCTGGGCACCACGAGGCTCCCACACAACCAACTGTTCTGGCTTGCATGGAACTGCACCCCAGCTGCTaGAGCTGGTCCTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SAGHHEAPTQPTVLACMELHPSC*SWSWPS
Trigger: GGACGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAG...TTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTGGTGCCCAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGGCGGCAGCGCCGCCGTaGGGCACTTCCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEAAAPP*GTSSST
Trigger: GGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGC...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCCCAACTGTTCTGGCTTaGATGGAAATGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAPTVLA*MEMGRT
Trigger: AGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGG...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCCGTCACTGCAGATCCTaGAGGTTGATAGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAARHCRS*RLIVLP
Trigger: AGGAAGCACTATCAACCTGCAGGATCTGCAGTGACG...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCCGCTGGGCACCACGAGGCTCCCACACAACCAACTGTTCTGGCTTGCATGGAATGCCCAGGCCGAGGCTaGCGTCACTGCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SAGHHEAPTQPTVLACMECPGRG*RHCRSC
Trigger: GCAGGATCTGCAGTGACGGCAGCCTCGGCCTGGGCA...TTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTGGTGCCCAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGGGAAGGGGAGGAAGGTaGCTGGGCCGCGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEGRGGR*LGRGPR
Trigger: CCTCGGCCCGCGGCCCAGCCACCTTCCTCCCCTTCC...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CCGGTCCAGCAGGGCCTCCAGATGAGGGGAGCACCTCCTGGAGGACGTAGACGGAGTGAATGTACAGACTaGTACGAGCGGAGAACCTCG +
Preference number: 4 (lower is better)
Translates to: PVQQGLQMRGAPPGGRRRSECTD*YERRTS
Trigger: CGAGGTTCTCCGCTCGTAGCAGTCTGTACATTCACT...CCGTCTACGTCCTCCAGGAGGTGCTCCCCTCATCTGGAGGCCCTGCTGGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGTCTTGGCGCCGGCTGTaGTGTCTGACCATGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAESWRRL*CLTMCA
Trigger: GGCGCACATGGTCAGACAGCACAGCCGGCGCCAAGA...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGTCCAGCCTGCAGAACCGTGGCTaGTGTCCCGAGAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: QILQVDSASWELGGLRSSLQNRG*CPENQR
Trigger: CCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAG...GCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp GAGCACCTCCTGGAGGACGTAGACGGGCAGGTCCACAGTGAGGAAGGGGAGGAAAGGGCTGTCCAGGCTTaGGGGAATATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EHLLEDVDGQVHSEEGEERAVQA*GNITVG
Trigger: GCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCT...TTCCTCCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp TCCGCTGGGCACCACGAGGCTCCCACACAACCAACTGTTCTGGCTTGCATGGAAGACTGGGGCAGCCCATaGCTTCCTTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAGHHEAPTQPTVLACMEDWGSP*LPSCCP
Trigger: TGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTC...TTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTGGTGCCCAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTGCACCAGCTGGACCTaGACGCCCTGCGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHECTSWT*TPCAPH
Trigger: GTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCA...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGAGTCCGGCTCCACCTTaGTTGGAGCCAGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAESPAPP*LEPAVP
Trigger: CGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACT...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGCCGTGGCCTTGGGCCTaGCCAGGCCGAGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQPWPWA*PGRGCR
Trigger: ACGGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGG...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCCTGCTGCAGAACCGTaGCTGCTGTCCCGAGAACCA +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEPAAEP*LLSREP
Trigger: TGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCGGCTCCACCTTGATTaGAGCCAGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAERLHLD*SQQFRD
Trigger: GTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp TACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCACAGGACGGCGGCTCGCCAGGTTaGCACGGGAGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: YKTPNLQGKEHITMEPQDGGSPG*HGSQAR
Trigger: CCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCC...GTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTCCTCCAGTGGGCACTTaGAGGGCCGCCGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPPPVGT*RAAGPD
Trigger: GTCAGGGCCGGCGGCCCTTCAAGTGCCCACTGGAGG...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGGCACGTCATCCACACTaGAGCTGCCCTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEARHPH*SCPAAE
Trigger: TTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGC...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGTCCAGCCCCAGGCTCATGTCATaGGTCTCAGGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QILQVDSASWELGGLRSSPRLMS*VSGKVC
Trigger: ACACACCTTCCCTGAGACTCATGACATGAGCCTGGG...GCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGCCCTGCGCCCCGCACTaGACCCCAGCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQPCAPH*TPAAGA
Trigger: AGCTCCAGCAGCTGGGGTGCAGTGCGGGGCGCAGGG...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp GAGCACCTCCTGGAGGACGTAGACGGGCAGGTCCACAGTGAGGAAGGGGAGGAAGTTGCAGGTAGAAACTaGGCAACGGCTTTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: EHLLEDVDGQVHSEEGEEVAGRN*ATAFRS
Trigger: GCTCCGAAAAGCCGTTGCCCAGTTTCTACCTGCAAC...TTCCTCCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGCTGCCCAACTGCTCCTaGGCGAGAAGGCGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHELPNCS*ARRRVR
Trigger: CCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAG...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACCTGCCCAACTGCTCCTaGGCGAGAAGGCGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDLPNCS*ARRRVR
Trigger: CCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAG...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCTGCACCAGCTGGACCTaGACGCCCTGCGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPCTSWT*TPCAPH
Trigger: GTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCA...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGCCTAGACCGTGGCCTTaGGCCTGCCCAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQPRPWP*ACPGRG
Trigger: GCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGG...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTAGGCTCGGCCTCCTGTaGTCCGGCAGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSRLGLL*SGSLGG
Trigger: GCCGCCGAGGCTGCCGGATCACAGGAGGCCGAGCCT...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR TCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTGGCGGCTCGCCAGGTTaGCACGGGAGCCAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSGGSPG*HGSQAR
Trigger: CCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCC...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR TCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTGCCAGTGCCTGCACTaGGCTCTGTGTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHECQCLH*ALCPGH
Trigger: GTGCCCAGGACACAGAGCTCAGTGCAGGCACTGGCA...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCACAGGACTCGAGCTGAGCTTGGCGTaGGTGGGGAAGCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QNPQSSRKGAHYHGATGLELSLA*VGKRSA
Trigger: CGCCGAGCGCTTCCCCACGCACGCCAAGCTCAGCTC...GAGTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCGAGGCTGCCGTCACTaGAGATCCTGCAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAERGCRH*RSCRLI
Trigger: TATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAACCGTGGCCTTGGGCCTaGCCAGGCCGAGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKPWPWA*PGRGCR
Trigger: ACGGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGG...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp GAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTAGGACTGGTCATGAGCACCACAGCCCTCCAGTaGGCACTTGAAGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EPLKVAYVSTPLLGLVMSTTALQ*ALEGPP
Trigger: CGGCGGCCCTTCAAGTGCCCACTGGAGGGCTGTGGT...GCTCATGACCAGTCCTAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp GAGCACCTCCTGGAGGACGTAGACGGGCAGGTCCACAGTGAGGAAGGGGAGGAATTAGTGAGCTCACTTTaGCCTGGGCTGCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EHLLEDVDGQVHSEEGEELVSSL*PGLLSS
Trigger: TGAACTCAGCAGCCCAGGCCAAAGTGAGCTCACTAA...TTCCTCCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCTGCACCCCAGCTGCTaGAGCTGGTCCTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPLHPSC*SWSWPS
Trigger: GGACGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTGGAAGGGGAGGAAGGTaGCTGGGCCGCGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSGRGGR*LGRGPR
Trigger: CCTCGGCCCGCGGCCCAGCCACCTTCCTCCCCTTCC...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGGTGCTTCCTGGGAACTaGGTGGCCTCCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEVLPGN*VASGPA
Trigger: TGCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCAC...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGGATGCTCTGCTCTGGTaGATGATTTCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEDALLW*MISHSP
Trigger: AGGGCTGTGGGAAATCATTCACCAGAGCAGAGCATC...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGCACCTCCTGGAGGACGTAGACGGGCAGGTCCACAGTGAGGAAGGGGAGGAACAGGCTTTATCATACTaGTTGCTGCACCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EHLLEDVDGQVHSEEGEEQALSY*LLHPGK
Trigger: CTTTCCTGGGTGCAGCAAGCAGTATGATAAAGCCTG...TTCCTCCCCTTCCTCACTGTGGACCTGCCCGTCTACGTCCTCCAGGAGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCCTGCACTCACAGTCTaGACGTCATCCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEPALTV*TSSTLK
Trigger: CTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACCCATGGCTTCCTTCCTaGTGCCCAACTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDPWLPS*CPTAPG
Trigger: CCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGG...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCCCTGCGCCCCGCACTaGACCCCAGCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWPCAPH*TPAAGA
Trigger: AGCTCCAGCAGCTGGGGTGCAGTGCGGGGCGCAGGG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGTGCCCAGGCCGAGGCTaGCGTCACTGCAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQCPGRG*RHCRSC
Trigger: GCAGGATCTGCAGTGACGGCAGCCTCGGCCTGGGCA...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGGGGAGACCCTTGCCTTaGCAAAGCACTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEGRPLP*QSTLLT
Trigger: TGTGAGCAAAGTGCTTTGGCAAGGCAAGGGTCTCCC...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGACCACAGCCCTCCAGTaGGCACTTGAAGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQTTALQ*ALEGPP
Trigger: CGGCGGCCCTTCAAGTGCCCACTGGAGGGCTGTGGT...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGACCGTGCTGCTCTGCTaGACTGGGCAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHETVLLC*TGQRGL
Trigger: CAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGT...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCTGGCCGTCCTCCGCTaGGCACCACGAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSLAVLR*APRGSH
Trigger: GTGGGAGCCTCGTGGTGCCCAGCGGAGGACGGCCAG...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGGCTTGTAGGACGTTGTaGAGGCCCAACCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEACRTL*RPNHSP
Trigger: AGGGCTGTGGTTGGGCCTTCACAACGTCCTACAAGC...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR TCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCGCCGGCTGTGCTGTCTaGCCATGTGCGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPAGCAV*PCAPSC
Trigger: GCATGAAGGCGCACATGGTCAGACAGCACAGCCGGC...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACGCACGTCATCCACACTaGAGCTGCCCTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDARHPH*SCPAAE
Trigger: TTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGC...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCACAGGACTCCAAAGGAGTCCGGCTCCACCTTaGTTGGAGCCAGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PQSSRKGAHYHGATGLQRSPAPP*LEPAVP
Trigger: CGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACT...CCTTTGGAGTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGGAGCTGAGCTTGGCGTaGGTGGGGAAGCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWELSLA*VGKRSA
Trigger: CGCCGAGCGCTTCCCCACGCACGCCAAGCTCAGCTC...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR GCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAAGCACTGCACCCCAGCTaGTGGAGCTGGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKALHPS*WSWSWP
Trigger: CGGCCAGGACCAGCTCCAGCAGCTGGGGTGCAGTGC...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAATGGACCTGGACGCCCTaGGCCCCGCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQWTWTP*APHCTP
Trigger: TGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGGTCCA...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGCGTCACTGCAGATCCTaGAGGTTGATAGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAERHCRS*RLIVLP
Trigger: AGGAAGCACTATCAACCTGCAGGATCTGCAGTGACG...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGAGGGCTGTCCAGGCTTaGGGGAATATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHERAVQA*GNITVG
Trigger: GCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCT...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTGACTGGGGCAGCCCATaGCTTCCTTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPDWGSP*LPSCCP
Trigger: TGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTC...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGACTGGGGCAGCCCATaGCTTCCTTCCTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQDWGSP*LPSCCP
Trigger: TGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTC...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCTGGGCAACGTGGACTaGGGCAGCCCATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPLGNVD*GSPWLP
Trigger: AGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGTGCTTCCTGGGAACTaGGTGGCCTCCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQVLPGN*VASGPA
Trigger: TGCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCAC...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACGTTGATAGTGCTTCCTaGGAACTGGGTGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDVDSAS*ELGGLR
Trigger: CCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAAC...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp GCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAAGGCTCGGCCTCCTGTaGTCCGGCAGCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: ADKHRGKVSQHYKTPNLQRLGLL*SGSLGG
Trigger: GCCGCCGAGGCTGCCGGATCACAGGAGGCCGAGCCT...TTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCAGTCCGGCTCCACCTTaGTTGGAGCCAGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPSPAPP*LEPAVP
Trigger: CGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACT...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TTTAAAGTTTCCATTGAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTAGCGGCAGCGCCGCCGTaGGGCACTTCCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: FKVSIEPLKVAYVSTPLLAAAPP*GTSSST
Trigger: GGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGC...TAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTCAATGGAAACTTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCTGAAGCTGCCCTGCTaGAGAACCGTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPLKLPC*RTVAAV
Trigger: GACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp GAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTAGGACTGGTCATGAGCACACTGAAGCTGCCCTaGTGCAGAACCGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPLKVAYVSTPLLGLVMSTLKLP*CRTVAA
Trigger: AGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGT...GCTCATGACCAGTCCTAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGTGGCTTCCTTCCTGCTaGCCAACTGCTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQWLPSC*PTAPGR
Trigger: TCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCA...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TGTCTCGACTCCTCTTCTAGGACTGGTCATGAGCTGACAAGCATAGAGGCAAAGCCATGGCTTCCTTCCTaGTGCCCAACTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLDSSSRTGHELTSIEAKPWLPS*CPTAPG
Trigger: CCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGG...CTTTGCCTCTATGCTTGTCAGCTCATGACCAGTCCTAGAAGAGGAGTCGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACCGAGGCTGCCGTCACTaGAGATCCTGCAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDRGCRH*RSCRLI
Trigger: TATCAACCTGCAGGATCTGCAGTGACGGCAGCCTCG...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACGAGCTCACTTTGGCCTaGGCTGCTGAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDELTLA*AAEFTA
Trigger: AGCAGTGAACTCAGCAGCCCAGGCCAAAGTGAGCTC...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCCTGCTGCAGAACCGTaGCTGCTGTCCCGAGAACCA +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPPAAEP*LLSREP
Trigger: TGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTTCATCCTGCACCAGCTaGACCTGGACGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSSSCTS*TWTPCA
Trigger: GGCGCAGGGCGTCCAGGTCCAGCTGGTGCAGGATGA...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTGCTTGTAGGACGTTGTaGAGGCCCAACCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPACRTL*RPNHSP
Trigger: AGGGCTGTGGTTGGGCCTTCACAACGTCCTACAAGC...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp GAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTAGGACTGGTCATGAGCGTATGGCTCCGCAGGTaGATTTTCAGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: EPLKVAYVSTPLLGLVMSVWLRR*IFSRQA
Trigger: AGCCTGTCGGCTGAAAATTCACCTGCGGAGCCATAC...GCTCATGACCAGTCCTAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGGTAATCAGTTCTTGCTaGGCCCCCACTTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEVISSC*APTFQI
Trigger: TATTTGGAAAGTGGGGGCTCAGCAAGAACTGATTAC...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR GCA 90 bp AAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTTCTTGGCGCCGGCTGTaGTGTCTGACCATGTGCGCC +
Preference number: 4 (lower is better)
Translates to: KVIRTCQFQTCSPGLRPFSWRRL*CLTMCA
Trigger: GGCGCACATGGTCAGACAGCACAGCCGGCGCCAAGA...AAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGCCTGCACTCACAGTCTaGACGTCATCCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEPALTV*TSSTLK
Trigger: CTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCACAGGACTGGCTTCCTTCCTGCTaGCCAACTGCTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: YKTPNLQGKEHITMEPQDWLPSC*PTAPGR
Trigger: TCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCA...GTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTGGACCTGGACGCCCTaGGCCCCGCACTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLWTWTP*APHCTP
Trigger: TGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGGTCCA...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAACGCACCAGCAGGTCCTaGCTGCTGATGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQRTSRS*LLMVTA
Trigger: CGCCGTCACCATCAGCAGCCAGGACCTGCTGGTGCG...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACCACTCAAGTTCTTCATaGGCAGAGCCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDHSSSS*AEPPDS
Trigger: GCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTG...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp ACATTACCATGGAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAACTGGGCAACGTGGACTaGGGCAGCCCATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLPWSHRTPKDLRKHLAKLGNVD*GSPWLP
Trigger: AGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAG...TTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTCCATGGTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAGTGTGTCCTAGACCGTaGCCTTGGGCCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQVCPRP*PWACPG
Trigger: GCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACAC...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
3UTR CAA 72 bp GCACCACGAGGCTCCCACACAACCAACTGTTCTGGCTaGCATGGAAATGGGGAGGACTCATTTTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: APRGSHTTNCSG*HGNGEDSFCLL
Trigger: AAGAAGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGTTGTGTGGGAGCCTCGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR TCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCGCACACCTCGCACTTaGACAGGCTCTCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWRTPRT*TGSPAR
Trigger: ACGAGCAGGAGAGCCTGTTCAAGTGCGAGGTGTGCG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTAGAGCTCTTGTTCCCTaGAGTGGGCTCGGTTATGGG +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPRALVP*SGLGYG
Trigger: CCCATAACCGAGCCCACTTCAGGGAACAAGAGCTCT...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGAGAGCTCTTGTTCCCTaGAGTGGGCTCGGTTATGGG +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQRALVP*SGLGYG
Trigger: CCCATAACCGAGCCCACTTCAGGGAACAAGAGCTCT...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp ATCCAGAATATCCTCAAGACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACTGCCAGTGCCTGCACTaGGCTCTGTGTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IQNILKTEYERSDLYGGDCQCLH*ALCPGH
Trigger: GTGCCCAGGACACAGAGCTCAGTGCAGGCACTGGCA...GTCACCACCATATAGGTCACTTCTCTCATACTCGGTCTTGAGGATATTCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGCCCAGGCTCATGTCATaGGTCTCAGGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQPRLMS*VSGKVC
Trigger: ACACACCTTCCCTGAGACTCATGACATGAGCCTGGG...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCTGCAGAACCGTGGCTaGTGTCCCGAGAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWLQNRG*CPENQR
Trigger: CCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCTGAAGCTGCCCTGCTaGAGAACCGTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWLKLPC*RTVAAV
Trigger: GACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAATTCCTGCTGCCCAACTaGTCCTGGGCGAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKFLLPN*SWARRR
Trigger: TCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAA...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTGGCTTCCTTCCTGCTaGCCAACTGCTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWWLPSC*PTAPGR
Trigger: TCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAACCATGGCTTCCTTCCTaGTGCCCAACTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKPWLPS*CPTAPG
Trigger: CCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGG...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACGTGGCAAAATCAACTTaGCCACAAACCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDVAKST*PQTPSQ
Trigger: CTGGGATGGGGTTTGTGGGCAAGTTGATTTTGCCAC...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCACAGGACTCGAGCTCACTTTGGCCTaGGCTGCTGAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QNPQSSRKGAHYHGATGLELTLA*AAEFTA
Trigger: AGCAGTGAACTCAGCAGCCCAGGCCAAAGTGAGCTC...GAGTCCTGTGGCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCGAGCTCACTTTGGCCTaGGCTGCTGAGTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPELTLA*AAEFTA
Trigger: AGCAGTGAACTCAGCAGCCCAGGCCAAAGTGAGCTC...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACTTAGTGAGCTCACTTTaGCCTGGGCTGCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDLVSSL*PGLLSS
Trigger: TGAACTCAGCAGCCCAGGCCAAAGTGAGCTCACTAA...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTGGGGGAATATCACTGTaGGCCACCAGGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FVKVIRTCQFQTCSPGLRGGISL*ATRTRG
Trigger: ACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCC...ACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTCGGCTCCACCTTGATTaGAGCCAGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KVIRTCQFQTCSPGLRPFRLHLD*SQQFRD
Trigger: GTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCG...AAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACCTGCCCAACTGCTCCTaGGCGAGAAGGCGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: RGKVSQHYKTPNLQGKEHLPNCS*ARRRVR
Trigger: CCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAG...GTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAACTGGGCAACGTGGACTaGGGCAGCCCATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQLGNVD*GSPWLP
Trigger: AGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAG...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTACCGTGCTGCTCTGCTaGACTGGGCAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSTVLLC*TGQRGL
Trigger: CAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGT...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTGATGCTCTGCTCTGGTaGATGATTTCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPDALLW*MISHSP
Trigger: AGGGCTGTGGGAAATCATTCACCAGAGCAGAGCATC...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp AGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACGCCGGCTGTGCTGTCTaGCCATGTGCGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: RGKVSQHYKTPNLQGKEHAGCAV*PCAPSC
Trigger: GCATGAAGGCGCACATGGTCAGACAGCACAGCCGGC...GTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp TTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTGCACGTCATCCACACTaGAGCTGCCCTGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FVKVIRTCQFQTCSPGLRARHPH*SCPAAE
Trigger: TTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGC...ACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp AGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACTGCCAGTGCCTGCACTaGGCTCTGTGTCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGKVSQHYKTPNLQGKEHCQCLH*ALCPGH
Trigger: GTGCCCAGGACACAGAGCTCAGTGCAGGCACTGGCA...GTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCTCTCTGAGTAGACTGTaGGGCTCCATGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCSLSRL*GSMEPQ
Trigger: CTGTGGCTCCATGGAGCCTCACAGTCTACTCAGAGA...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACCTTTATCATACTGCTTaGTGCACCCAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDLYHTA*CTQERS
Trigger: GCTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAG...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGCAGGCTTTATCATACTaGTTGCTGCACCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEQALSY*LLHPGK
Trigger: CTTTCCTGGGTGCAGCAAGCAGTATGATAAAGCCTG...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGTGCTGTCTGACCATGTaGGCCTTCATGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQCCLTM*AFMLCL
Trigger: CAAGCACAGCATGAAGGCGCACATGGTCAGACAGCA...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAAACACTGAAGCTGCCCTaGTGCAGAACCGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKTLKLP*CRTVAA
Trigger: AGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGT...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAATTCCTGCTGCCCAACTaGTCCTGGGCGAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQFLLPN*SWARRR
Trigger: TCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAA...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAAAGGGCTGTCCAGGCTTaGGGGAATATCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKRAVQA*GNITVG
Trigger: GCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCT...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp CTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCCCTGCTGCAGAACCGTaGCTGCTGTCCCGAGAACCA +
Preference number: 4 (lower is better)
Translates to: LNITKPPIFKERSTLPWSPAAEP*LLSREP
Trigger: TGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGG...GCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTCACTCAAGTTCTTCATaGGCAGAGCCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPHSSSS*AEPPDS
Trigger: GCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTG...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAACTGAGCTCTGTGTCCTaGGCACCGTGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQLSSVS*APCCSA
Trigger: AGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAG...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGCTGTTCTGGCTTGCATaGAAATGGGGAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHELFWLA*KWGGLI
Trigger: AATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAG...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCGACTGTGAGGCTCCATaGAGCCACAGGACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCDCEAP*SHRTPK
Trigger: CTTTGGAGTCCTGTGGCTCCATGGAGCCTCACAGTC...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR TCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGGTATGGCTCCGCAGGTaGATTTTCAGCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWVWLRR*IFSRQA
Trigger: AGCCTGTCGGCTGAAAATTCACCTGCGGAGCCATAC...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGGCCGGCTGTGCTGTCTaGCCATGTGCGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLAGCAV*PCAPSC
Trigger: GCATGAAGGCGCACATGGTCAGACAGCACAGCCGGC...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCTCGGAGCTTCTAGCTaGGGTAAGAGATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWLGASS*GKRSWR
Trigger: GCGCCAAGATCTCTTACCTCAGCTAGAAGCTCCGAG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTCTCTGAGTAGACTGTaGGGCTCCTGCATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWSLSRL*GSCIAP
Trigger: GGGAGCAATGCAGGAGCCTCACAGTCTACTCAGAGA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR GCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCAGTGAATGTACAGACTaGTACGAGCGGAGAACCTCG +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPSECTD*YERRTS
Trigger: CGAGGTTCTCCGCTCGTAGCAGTCTGTACATTCACT...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp GACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGATCTTGGCGCCGGCTGTaGTGTCTGACCATGTGCGCC +
Preference number: 4 (lower is better)
Translates to: DKHRGKVSQHYKTPNLQGSWRRL*CLTMCA
Trigger: GGCGCACATGGTCAGACAGCACAGCCGGCGCCAAGA...TCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTCTCATCCGACCCACCTaGAGAACCACTAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: KVIRTCQFQTCSPGLRPFLIRPT*RTTSIG
Trigger: GCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAG...AAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCGGGAGACCCTTGCCTTaGCAAAGCACTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCGRPLP*QSTLLT
Trigger: TGTGAGCAAAGTGCTTTGGCAAGGCAAGGGTCTCCC...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCGCACCAGCAGGTCCTaGCTGCTGATGGTGACGGCG +
Preference number: 4 (lower is better)
Translates to: QSISTLQNPQSSRKGAHYRTSRS*LLMVTA
Trigger: CGCCGTCACCATCAGCAGCCAGGACCTGCTGGTGCG...GTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAGGTCAAAGCCAGTaGGTCGTCACTCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQGGQSQ*VVTQVL
Trigger: AAGAACTTGAGTGACGACCCACTGGCTTTGACCTCC...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGCTGCTAAGTTACTATTaGAGGTCAAAGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RWSSERKPNEVSPGSCHELLSYY*RSKPVG
Trigger: ACCCACTGGCTTTGACCTCCAATAGTAACTTAGCAG...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTAGGACTGGTCATGAGCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAACCGTGCTGCTCTGCTaGACTGGGCAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: SRTGHELTSIEAKYLNITTVLLC*TGQRGL
Trigger: CAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGT...TGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGCTCATGACCAGTCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTAGGAGCACATTACCATaGAGCCACAGGACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPRSTLP*SHRTPK
Trigger: CTTTGGAGTCCTGTGGCTCCATGGTAATGTGCTCCT...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp GCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAACGCACACCTCGCACTTaGACAGGCTCTCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ADKHRGKVSQHYKTPNLQRTPRT*TGSPAR
Trigger: ACGAGCAGGAGAGCCTGTTCAAGTGCGAGGTGTGCG...TTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAAGAGCTCTTGTTCCCTaGAGTGGGCTCGGTTATGGG +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQRALVP*SGLGYG
Trigger: CCCATAACCGAGCCCACTTCAGGGAACAAGAGCTCT...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCAAGAGGTCGGTGTGGTaGTATGTGCTGCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPKRSVW*YVLLSY
Trigger: GTAACTTAGCAGCACATATCACCACACCGACCTCTT...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGAAGAGGTCGGTGTGGTaGTATGTGCTGCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQKRSVW*YVLLSY
Trigger: GTAACTTAGCAGCACATATCACCACACCGACCTCTT...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCTATCATACTGCTTGCTaGACCCAGGAAAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCYHTAC*TQERSR
Trigger: CCTGCTCCTTTCCTGGGTGCAGCAAGCAGTATGATA...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTGCTGTCTGACCATGTaGGCCTTCATGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWCCLTM*AFMLCL
Trigger: CAAGCACAGCATGAAGGCGCACATGGTCAGACAGCA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp TTTAAAGTTTCCATTGAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTACTGCAGAACCGTGGCTaGTGTCCCGAGAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKVSIEPLKVAYVSTPLLLQNRG*CPENQR
Trigger: CCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAG...TAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTCAATGGAAACTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp GACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGACTGAAGCTGCCCTGCTaGAGAACCGTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DKHRGKVSQHYKTPNLQGLKLPC*RTVAAV
Trigger: GACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAG...TCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTTCCTGCTGCCCAACTaGTCCTGGGCGAGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLFLLPN*SWARRR
Trigger: TCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAA...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCAAGTGGGCTCGGTTATaGGAAAACAGGGCACTCACT +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCKWARL*ENRALT
Trigger: AGTGAGTGCCCTGTTTTCCCATAACCGAGCCCACTT...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTGTTGCAGGTAGAAACTaGGCAACGGCTTTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSVAGRN*ATAFRS
Trigger: GCTCCGAAAAGCCGTTGCCCAGTTTCTACCTGCAAC...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp GACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGACTGAGCTCTGTGTCCTaGGCACCGTGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DKHRGKVSQHYKTPNLQGLSSVS*APCCSA
Trigger: AGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAG...TCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGCTGAGCTCTGTGTCCTaGGCACCGTGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLLSSVS*APCCSA
Trigger: AGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAG...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCTGGCTTGCATGGAAATaGGGAGGACTCATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPWLAWK*GGLILP
Trigger: AGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCA...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCTGTTCTGGCTTGCATaGAAATGGGGAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPLFWLA*KWGGLI
Trigger: AATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGTCAAAAGGGCTACGCTaGTCTTCTGAACGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQSKGLR*SSERKP
Trigger: TGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGA...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGCTGCTCTACCAGACTTaGGCTAGAATTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSERKPNEVSPGSCHESQLLYQT*ARIWLH
Trigger: GTGAAGCCAAATTCTAGCCCAAGTCTGGTAGAGCAG...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTCCATTGAACCTCTaGAGGTGGCTTATGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPFPLNL*RWLMSR
Trigger: TCGAGACATAAGCCACCTTCAGAGGTTCAATGGAAA...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp ATCCAGAATATCCTCAAGACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACTGCTGTCTGACCATGTaGGCCTTCATGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: IQNILKTEYERSDLYGGDCCLTM*AFMLCL
Trigger: CAAGCACAGCATGAAGGCGCACATGGTCAGACAGCA...GTCACCACCATATAGGTCACTTCTCTCATACTCGGTCTTGAGGATATTCTGGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACACTCATCCGACCCACCTaGAGAACCACTAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: EAKYLNITKPPIFKERSTLIRPT*RTTSIG
Trigger: GCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAG...TGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp GAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACAGAAGTTGCCAGTGCCTaGACTGAGCTCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EAKYLNITKPPIFKERSTEVASA*TELCVL
Trigger: CAGGACACAGAGCTCAGTGCAGGCACTGGCAACTTC...TGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR GCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGCCAACTGTTCTGGCTTaGATGGAAATGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWPTVLA*MEMGRT
Trigger: AGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGG...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTGTGGCAAAATCAACTTaGCCACAAACCCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSVAKST*PQTPSQ
Trigger: CTGGGATGGGGTTTGTGGGCAAGTTGATTTTGCCAC...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACGGGGGAATATCACTGTaGGCCACCAGGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QSISTLQNPQSSRKGAHYGGISL*ATRTRG
Trigger: ACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCC...GTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGCGGCTCCACCTTGATTaGAGCCAGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KHRGKVSQHYKTPNLQGKRLHLD*SQQFRD
Trigger: GTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCG...CTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCCTTGGCTAGTTGAATaGCTCGGTAATCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPPWLVE*LGNQFL
Trigger: CAAGAACTGATTACCGAGCCATTCAACTAGCCAAGG...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR TCA 90 bp GCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAACTCTGCTCTGGTGAATaGTTTCCCACAGCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: ADKHRGKVSQHYKTPNLQLCSGE*FPTALD
Trigger: GTCGAGGGCTGTGGGAAATCATTCACCAGAGCAGAG...TTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGCTCTGCTCTGGTGAATaGTTTCCCACAGCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLLCSGE*FPTALD
Trigger: GTCGAGGGCTGTGGGAAATCATTCACCAGAGCAGAG...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTCTATATGGTGGTGACTaGATAGAGTGCTTCATACCA +
Preference number: 4 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPLYGGD*IECFIP
Trigger: TGGTATGAAGCACTCTATTCAGTCACCACCATATAG...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp ACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTTTTGTAAACCAGAAAAGATCAAGCTGCATCTaGCTAGACAGCCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TCQFQTCSPGLRPFVNQKRSSCI*LDSLFS
Trigger: AGAGAACAGGCTGTCTAGTCAGATGCAGCTTGATCT...TTTCTGGTTTACAAAAGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACACCTGCACTCACAGTCTaGACGTCATCCACACTGAAG +
Preference number: 4 (lower is better)
Translates to: EAKYLNITKPPIFKERSTPALTV*TSSTLK
Trigger: CTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG...TGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp GAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACAGTTGCAGGTAGAAACTaGGCAACGGCTTTTCGGAGC +
Preference number: 4 (lower is better)
Translates to: EAKYLNITKPPIFKERSTVAGRN*ATAFRS
Trigger: GCTCCGAAAAGCCGTTGCCCAGTTTCTACCTGCAAC...TGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp TCTAGGACTGGTCATGAGCTGACAAGCATAGAGGCAAAGTATCTCAACATTACACACTCAAGTTCTTCATaGGCAGAGCCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: SRTGHELTSIEAKYLNITHSSSS*AEPPDS
Trigger: GCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTG...TGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGCTCATGACCAGTCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp ATCCAGAATATCCTCAAGACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACGGAGGTCAAAGCCAGTaGGTCGTCACTCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IQNILKTEYERSDLYGGDGGQSQ*VVTQVL
Trigger: AAGAACTTGAGTGACGACCCACTGGCTTTGACCTCC...GTCACCACCATATAGGTCACTTCTCTCATACTCGGTCTTGAGGATATTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTGGCTTGCATGGAAATaGGGAGGACTCATTTTGCCT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWWLAWK*GGLILP
Trigger: AGGCAAAATGAGTCCTCCCCATTTCCATGCAAGCCA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp CAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCTCGGAGCTTCTAGCTaGGGTAAGAGATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: QSISTLQNPQSSRKGAHYLGASS*GKRSWR
Trigger: GCGCCAAGATCTCTTACCTCAGCTAGAAGCTCCGAG...GTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp CTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGCAAGAGGTCGGTGTGGTaGTATGTGCTGCTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LNITKPPIFKERSTLPWSKRSVW*YVLLSY
Trigger: GTAACTTAGCAGCACATATCACCACACCGACCTCTT...GCTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCCTATATGGTGGTGACTaGATAGAGTGCTTCATACCA +
Preference number: 4 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCLYGGD*IECFIP
Trigger: TGGTATGAAGCACTCTATTCAGTCACCACCATATAG...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAAGATCAAGCTGCATCTaGCTAGACAGCCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQRSSCI*LDSLFS
Trigger: AGAGAACAGGCTGTCTAGTCAGATGCAGCTTGATCT...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAACTTTATCATACTGCTTaGTGCACCCAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQLYHTA*CTQERS
Trigger: GCTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAG...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAACTGCTCTACCAGACTTaGGCTAGAATTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQLLYQT*ARIWLH
Trigger: GTGAAGCCAAATTCTAGCCCAAGTCTGGTAGAGCAG...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR TCA 90 bp AAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGATGCTCTGCTCTGGTaGATGATTTCCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: KHRGKVSQHYKTPNLQGKDALLW*MISHSP
Trigger: AGGGCTGTGGGAAATCATTCACCAGAGCAGAGCATC...CTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp TTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTACGTGTTTCTTAGAGTaGATGTACAGACTGCTACGA +
Preference number: 4 (lower is better)
Translates to: FVKVIRTCQFQTCSPGLRTCFLE*MYRLLR
Trigger: TCGTAGCAGTCTGTACATTCACTCTAAGAAACACGT...ACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR TCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGACGTGTTTCTTAGAGTaGATGTACAGACTGCTACGA +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWTCFLE*MYRLLR
Trigger: TCGTAGCAGTCTGTACATTCACTCTAAGAAACACGT...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp GAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACACAGGCTTTATCATACTaGTTGCTGCACCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EAKYLNITKPPIFKERSTQALSY*LLHPGK
Trigger: CTTTCCTGGGTGCAGCAAGCAGTATGATAAAGCCTG...TGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR TCA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAACGTGTTTCTTAGAGTaGATGTACAGACTGCTACGA +
Preference number: 4 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQTCFLE*MYRLLR
Trigger: TCGTAGCAGTCTGTACATTCACTCTAAGAAACACGT...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR GCA 90 bp CAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACAGTGAATGTACAGACTaGTACGAGCGGAGAACCTCG +
Preference number: 4 (lower is better)
Translates to: QSISTLQNPQSSRKGAHYSECTD*YERRTS
Trigger: CGAGGTTCTCCGCTCGTAGCAGTCTGTACATTCACT...GTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATTAGTGAGCTCACTTTaGCCTGGGCTGCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KYLNITKPPIFKERSTLPLVSSL*PGLLSS
Trigger: TGAACTCAGCAGCCCAGGCCAAAGTGAGCTCACTAA...TGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTCAAAAGGGCTACGCTaGTCTTCTGAACGGAAACCA +
Preference number: 4 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLSKGLR*SSERKP
Trigger: TGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGA...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR GCA 90 bp AAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGCTTTATCATACTGCTTaGTGCACCCAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KHRGKVSQHYKTPNLQGKLYHTA*CTQERS
Trigger: GCTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAG...CTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGAGAGTCACAAATAAATaGTCTTTCACCTGTATGGCT +
Preference number: 4 (lower is better)
Translates to: STLLTKAVSKSIARTHSWRVTNK*SFTCMA
Trigger: AGCCATACAGGTGAAAGACCATTTATTTGTGACTCT...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTAGAGTCACAAATAAATaGTCTTTCACCTGTATGGCT +
Preference number: 4 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSRVTNK*SFTCMA
Trigger: AGCCATACAGGTGAAAGACCATTTATTTGTGACTCT...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CCA 90 bp AAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCACTGCTAAGTTACTATTaGAGGTCAAAGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: KYLNITKPPIFKERSTLPLLSYY*RSKPVG
Trigger: ACCCACTGGCTTTGACCTCCAATAGTAACTTAGCAG...TGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CCA 90 bp TTAAGGCTCAGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCTGCTAAGTTACTATTaGAGGTCAAAGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LRLRWVKVICQGHKNLSVLLSYY*RSKPVG
Trigger: ACCCACTGGCTTTGACCTCCAATAGTAACTTAGCAG...AACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCTGAGCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CCA 90 bp AGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACAGAGTCACAAATAAATaGTCTTTCACCTGTATGGCT +
Preference number: 4 (lower is better)
Translates to: RGKVSQHYKTPNLQGKEHRVTNK*SFTCMA
Trigger: AGCCATACAGGTGAAAGACCATTTATTTGTGACTCT...GTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS TCA 90 bp GGGCGGCCGGGCCGCTGGGGCCCTGCTCGGGGCGGCTCGCCAGGTTaGCACGGGAGCCAGGCTCGGCCTCCTGTGATCCGGCAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: GRPGRWGPARGGSPG*HGSQARPPVIRQPR
Trigger: CCGAGGCTGCCGGATCACAGGAGGCCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCCCGAGCAGGGCCCCAGCGGCCCGGCCGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS TCA 90 bp GGGGCGGCTCGCCAGGTTGACACGGGAGCCAGGCTCGGCCTCCTGTaGTCCGGCAGCCTCGGCGGCAGCGCCGCCGTGCGGCACTTCCAG +
Preference number: 5 (lower is better)
Translates to: GAARQVDTGARLGLL*SGSLGGSAAVRHFQ
Trigger: CTGGAAGTGCCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCACAGGAGGCCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS-3UTR CAA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGGGCGGCTCGCCAGGTaGACACGGGAGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAGRLAR*TREPGS
Trigger: CGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS GCA 90 bp GGCTCGGCCTCCTGTGATCCGGCAGCCTCGGCGGCAGCGCCGCCGTaGGGCACTTCCAGCAGCACCAAGAAAGAGTCGCCGTCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GSASCDPAASAAAPP*GTSSSTKKESPSLS
Trigger: CGACAGCGACGGCGACTCTTTCTTGGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCACAGGAGGCCGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS GCA 90 bp GCTGGACTGGGCAACGTGGACTGGGGCAGCCCATGGCTTCCTTCCTaGTGCCCAACTGCTCCTGGGCGAGAAGGCGAGTCCGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AGLGNVDWGSPWLPS*CPTAPGREGESGST
Trigger: GGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp GCTGCGATGGGCAGGGGATGCAGCATGCCGCACACTGCTCAGACCTaGGTGACCCTCCCACCCCGCCTACAGCTGGCCTGTGTGACTGGC +
Preference number: 5 (lower is better)
Translates to: AAMGRGCSMPHTAQT*VTLPPRLQLACVTG
Trigger: GCCAGTCACACAGGCCAGCTGTAGGCGGGGTGGGAGGGTCACGCAGGTCTGAGCAGTGTGCGGCATGCTGCATCCCCTGCCCATCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp GGACTGGGCAACGTGGACTGGGGCAGCCCATGGCTTCCTTCCTGCTaGCCAACTGCTCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: GLGNVDWGSPWLPSC*PTAPGREGESGSTL
Trigger: CAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGAGGGCTGTCCAGGCTaGGGGGAATATCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAEGCPG*GEYHCG
Trigger: CCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS CCA 90 bp GCTCTGTGTCCTGGGCACCGTGCTGCTCTGCTGGACTGGGCAACGTaGACTGGGGCAGCCCATGGCTTCCTTCCTGCTGCCCAACTGCTC +
Preference number: 5 (lower is better)
Translates to: ALCPGHRAALLDWAT*TGAAHGFLPAAQLL
Trigger: GAGCAGTTGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CAACGTGGACTGGGGCAGCCCATGGCTTCCTTCCTGCTGCCCAACTaGTCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTTGATTGGAGC +
Preference number: 5 (lower is better)
Translates to: QRGLGQPMASFLLPN*SWARRRVRLHLDWS
Trigger: GCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CCTCGGGCAGGGAGGCGGGCTACTCTGGGGCTAGACGCAGGGCTGTaGACAGACAGGTTCAGGAAGTGGATGCACGGTCCCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: PRAGRRATLGLDAGL*TDRFRKWMHGPSNT
Trigger: AGTGTTGCTGGGACCGTGCATCCACTTCCTGAACCTGTCTGTGCACAGCCCTGCGTCTAGCCCCAGAGTAGCCCGCCTCCCTGCCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp AGCCCTGCAGAAGAAGGGCAGGGTGGCCTCAAACAGATCTCATCCTaGTGCAAAACAGCCCTGGGGGCCTCGGGCAGGGAGGCGGGCTAC +
Preference number: 5 (lower is better)
Translates to: SPAEEGQGGLKQISS*CKTALGASGREAGY
Trigger: GTAGCCCGCCTCCCTGCCCGAGGCCCCCAGGGCTGTTTTGCAGCAGGATGAGATCTGTTTGAGGCCACCCTGCCCTTCTTCTGCAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp TGCCCTGGCACGCCCTGTACCCCCACCAACCTTGTGTACCCAGAGTaGTCTCCAGCAAATCCTCGGGCCCCACAGAGGGCCTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: CPGTPCTPTNLVYPE*SPANPRAPQRAFPA
Trigger: TGCAGGGAAGGCCCTCTGTGGGGCCCGAGGATTTGCTGGAGAGCACTCTGGGTACACAAGGTTGGTGGGGGTACAGGGCGTGCCAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp AGTGCCTGCACTGAGCTCTGTGTCCTGGGCACCGTGCTGCTCTGCTaGACTGGGCAACGTGGACTGGGGCAGCCCATGGCTTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SACTELCVLGTVLLC*TGQRGLGQPMASFL
Trigger: CAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAGTGCAGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CCTGCAGAAGAAGGGCAGGGTGGCCTCAAACAGATCTCATCCTGCTaGAAAACAGCCCTGGGGGCCTCGGGCAGGGAGGCGGGCTACTCT +
Preference number: 5 (lower is better)
Translates to: PAEEGQGGLKQISSC*KTALGASGREAGYS
Trigger: AGAGTAGCCCGCCTCCCTGCCCGAGGCCCCCAGGGCTGTTTTGCAGCAGGATGAGATCTGTTTGAGGCCACCCTGCCCTTCTTCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp CATCTGTCCCACACTTCGCCTGTCCTGCACCTGCATGTCCGCCCATaGCCATTCACACCCCGAAGCGGAGCTCCTGGTGCTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: HLSHTSPVLHLHVRP*PFTPRSGAPGAAAL
Trigger: CAGAGCAGCAGCACCAGGAGCTCCGCTTCGGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTGGGACAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 90 bp GGTAGCCTAGAGCGTGCACTGCAGAGACCCCGGCTAGGCTCACCCTaGCCCGCCACCCACTCTGCTCCAGGGATCTGGAAAAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: GSLERALQRPRLGSP*PATHSAPGIWKRNS
Trigger: TGAGTTCCTTTTCCAGATCCCTGGAGCAGAGTGGGTGGCGGGTCAGGGTGAGCCTAGCCGGGGTCTCTGCAGTGCACGCTCTAGGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp CCTGCACTCACAGTCTGCACGTCATCCACACTGAAGCTGCCCTGCTaGAGAACCGTGGCTGCTGTCCCGAGAACCAGAGGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PALTVCTSSTLKLPC*RTVAAVPRTRGLSR
Trigger: CCTGGACAGCCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp GCTCCTGCACTCACAGTCTGCACGTCATCCACACTGAAGCTGCCCTaGTGCAGAACCGTGGCTGCTGTCCCGAGAACCAGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: APALTVCTSSTLKLP*CRTVAAVPRTRGLS
Trigger: GGACAGCCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp ACTGCAGAGACCCCGGCTAGGCTCACCCTGACCCGCCACCCACTCTaGTCCAGGGATCTGGAAAAGGAACTCAAGCTCTGGGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TAETPARLTLTRHPL*SRDLEKELKLWASA
Trigger: TGCTGAGGCCCAGAGCTTGAGTTCCTTTTCCAGATCCCTGGAGCAGAGTGGGTGGCGGGTCAGGGTGAGCCTAGCCGGGGTCTCTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp ACTCAGAGCCAGCGTCACCTCCACCCTCCGCACTTCCGTGGGGCCTaGAACCGCATCCCCTGCCACAGGGAATCTACAAAGTGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TQSQRHLHPPHFRGA*NRIPCHRESTKWSG
Trigger: ACCACTCCACTTTGTAGATTCCCTGTGGCAGGGGATGCGGTTGCAGGCCCCACGGAAGTGCGGAGGGTGGAGGTGACGCTGGCTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp GCTCCTGTTCTGCCGGTGGCACCAGCTTCCCTACCGTCTCCCTATTaGCAAGCCTCTGGTCCTGACTCTGTACCTCTGCCCTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: APVLPVAPASLPSPY*QASGPDSVPLPCQL
Trigger: CAGCTGGCAGGGCAGAGGTACAGAGTCAGGACCAGAGGCTTGGCAATAGGGAGACGGTAGGGAAGCTGGTGCCACCGGCAGAACAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp CAGGGAAGGTGTGTCCTAGACCGTGGCCTTGGGCCTGCCCAGGCCGAGGCTGCCGCTGCTAAGTTACTATaGGAGGTCAAAGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QGRCVLDRGLGPAQAEAAAAKLL*EVKASG
Trigger: CCCACTGGCTTTGACCTCCAATAGTAACTTAGCAGC...GGCAGCCTCGGCCTGGGCAGGCCCAAGGCCACGGTCTAGGACACACCTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CTGCACGTCATCCACACTGAAGCTGCCCTGCTGCAGAACCGTGGCTaGTGTCCCGAGAACCAGAGGGCTGTCCAGGCTTGGGGGAATATC +
Preference number: 5 (lower is better)
Translates to: LHVIHTEAALLQNRG*CPENQRAVQAWGNI
Trigger: GATATTCCCCCAAGCCTGGACAGCCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp TCTCCCTATTGCCAAGCCTCTGGTCCTGACTCTGTACCTCTGCCCTaGCAGCTGAGGCAGTGTTTCCTTGGATGGTCCTCCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SPYCQASGPDSVPLP*QLRQCFLGWSSPSP
Trigger: GGGGGAGGGGGAGGACCATCCAAGGAAACACTGCCTCAGCTGGCAGGGCAGAGGTACAGAGTCAGGACCAGAGGCTTGGCAATAGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp CAGCAAAGGTCCTCGTCTCACCTGAGAAGTCTCCTCCAGCTGCAATaGGTGGCAGAACCAGCCCACCCCCTGTATTCCAAGGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: QQRSSSHLRSLLQLQ*VAEPAHPLYSKGGP
Trigger: CGGGCCTCCCTTGGAATACAGGGGGTGGGCTGGTTCTGCCACGCATTGCAGCTGGAGGAGACTTCTCAGGTGAGACGAGGACCTTTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp CAGGTGTGCTCAGGGCTGCTGAAGCAGGTGTGCTCAAAGACCTCCTaGAAACTGGCCACAGCTGCAGGTATCTGTGGCCCGGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVCSGLLKQVCSKTS*KLATAAGICGPDRL
Trigger: CAGCCTGTCCGGGCCACAGATACCTGCAGCTGTGGCCAGTTTCCAGGAGGTCTTTGAGCACACCTGCTTCAGCAGCCCTGAGCACACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp TTTCCCAACTCAGAGCCAGCGTCACCTCCACCCTCCGCACTTCCGTaGGGCCTGCAACCGCATCCCCTGCCACAGGGAATCTACAAAGTG +
Preference number: 5 (lower is better)
Translates to: FPNSEPASPPPSALP*GLQPHPLPQGIYKV
Trigger: CACTTTGTAGATTCCCTGTGGCAGGGGATGCGGTTGCAGGCCCCACGGAAGTGCGGAGGGTGGAGGTGACGCTGGCTCTGAGTTGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 90 bp CCCCAGGCCTGGTCCTGTTTCCTTGGCGAGACTCTCCCAGGACTCTaGACCCACAAACGTGCCTGTTTCCCAACTCAGAGCCAGCGTCAC +
Preference number: 5 (lower is better)
Translates to: PQAWSCFLGETLPGL*THKRACFPTQSQRH
Trigger: GTGACGCTGGCTCTGAGTTGGGAAACAGGCACGTTTGTGGGTTCAGAGTCCTGGGAGAGTCTCGCCAAGGAAACAGGACCAGGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 90 bp GGCACCAGCTTCCCTACCGTCTCCCTATTGCCAAGCCTCTGGTCCTaGCTCTGTACCTCTGCCCTGCCAGCTGAGGCAGTGTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GTSFPTVSLLPSLWS*LCTSALPAEAVFPW
Trigger: CCAAGGAAACACTGCCTCAGCTGGCAGGGCAGAGGTACAGAGTCAGGACCAGAGGCTTGGCAATAGGGAGACGGTAGGGAAGCTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp CAGGCTAGAAACTTCATCTGTCCCACACTTCGCCTGTCCTGCACCTaGATGTCCGCCCATGGCCATTCACACCCCGAAGCGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: QARNFICPTLRLSCT*MSAHGHSHPEAELL
Trigger: CAGGAGCTCCGCTTCGGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTGGGACAGATGAAGTTTCTAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp CCAAGCGCAACTGAGGACAGCCAACAGCCCAGAGCCACAGCATCATaGAATAGGAAGGAAGCGGGCGGTCTCCATACCCCACCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PSATEDSQQPRATAS*NRKEAGGLHTPPVG
Trigger: ACCCACAGGTGGGGTATGGAGACCGCCCGCTTCCTTCCTATTCCATGATGCTGTGGCTCTGGGCTGTTGGCTGTCCTCAGTTGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 90 bp GACAGCCTAATGCTCCTGCACTCACAGTCTGCACGTCATCCACACTaGAGCTGCCCTGCTGCAGAACCGTGGCTGCTGTCCCGAGAACCA +
Preference number: 5 (lower is better)
Translates to: DSLMLLHSQSARHPH*SCPAAEPWLLSREP
Trigger: TGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGGAGCATTAGGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS TCA 90 bp TTGCTGAGCCCCCACTTTCCAAATAGAAGTTGCCAGTGCCTGCACTaGGCTCTGTGTCCTGGGCACCGTGCTGCTCTGCTGGACTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLSPHFPNRSCQCLH*ALCPGHRAALLDWA
Trigger: TGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAGTGCAGGCACTGGCAACTTCTATTTGGAAAGTGGGGGCTCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS GCA 90 bp ATGGGCAGAGCCACCAGACAGCCTAATGCTCCTGCACTCACAGTCTaGACGTCATCCACACTGAAGCTGCCCTGCTGCAGAACCGTGGCT +
Preference number: 5 (lower is better)
Translates to: MGRATRQPNAPALTV*TSSTLKLPCCRTVA
Trigger: AGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGGAGCATTAGGCTGTCTGGTGGCTCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CTGTTTCCTTGGCGAGACTCTCCCAGGACTCTGAACCCACAAACGTaGCTGTTTCCCAACTCAGAGCCAGCGTCACCTCCACCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: LFPWRDSPRTLNPQT*LFPNSEPASPPPSA
Trigger: TGCGGAGGGTGGAGGTGACGCTGGCTCTGAGTTGGGAAACAGGCACGTTTGTGGGTTCAGAGTCCTGGGAGAGTCTCGCCAAGGAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp ACAGTCCAGGCTAGAAACTTCATCTGTCCCACACTTCGCCTGTCCTaGACCTGCATGTCCGCCCATGGCCATTCACACCCCGAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: TVQARNFICPTLRLS*TCMSAHGHSHPEAE
Trigger: CTCCGCTTCGGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTGGGACAGATGAAGTTTCTAGCCTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp ACTCTGGGGCTAGACGCAGGGCTGTGCACAGACAGGTTCAGGAAGTaGATGCACGGTCCCAGCAACACTCAGAGCTTGAGCAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: TLGLDAGLCTDRFRK*MHGPSNTQSLSRCR
Trigger: CCTGCATCTGCTCAAGCTCTGAGTGTTGCTGGGACCGTGCATCCACTTCCTGAACCTGTCTGTGCACAGCCCTGCGTCTAGCCCCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp CCCACCTGGTTCTCATTCTGTCACCTTGATCCCAGCAGCTTTTGCTaGGCCTGGAACCTTCTGCTCTCCAGCTCCTCCCCTCAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PTWFSFCHLDPSSFC*AWNLLLSSSSPQSA
Trigger: GGCTGACTGAGGGGAGGAGCTGGAGAGCAGAAGGTTCCAGGCCCAGCAAAAGCTGCTGGGATCAAGGTGACAGAATGAGAACCAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp GGAAGGAAGCGGGCGGTCTCCATACCCCACCTGTGGGTGGACTGCTaGCTCTGTCCAGCTCCTTTCCAAGTCACTACTCCATGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: GRKRAVSIPHLWVDC*LCPAPFQVTTPWVL
Trigger: TAAAACCCATGGAGTAGTGACTTGGAAAGGAGCTGGACAGAGGCAGCAGTCCACCCACAGGTGGGGTATGGAGACCGCCCGCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp ATAGGAAGGAAGCGGGCGGTCTCCATACCCCACCTGTGGGTGGACTaGTGCCTCTGTCCAGCTCCTTTCCAAGTCACTACTCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: IGRKRAVSIPHLWVD*CLCPAPFQVTTPWV
Trigger: AACCCATGGAGTAGTGACTTGGAAAGGAGCTGGACAGAGGCAGCAGTCCACCCACAGGTGGGGTATGGAGACCGCCCGCTTCCTTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 90 bp AGCCCAAATACTGATTTCCCTCCTAAGGCACGCTCCTCAACTCCTTaGAGGTGCCCTGGCACGCCCTGTACCCCCACCAACCTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: SPNTDFPPKARSSTP*RCPGTPCTPTNLVY
Trigger: GTACACAAGGTTGGTGGGGGTACAGGGCGTGCCAGGGCACCTGCAAGGAGTTGAGGAGCGTGCCTTAGGAGGGAAATCAGTATTTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp CAGATCCTGCAGGTTGATAGTGCTTCCTGGGAACTGGGTGGCCTCCGGTCCAGCGCAGAACCACTAGCATaGGCAGGTGTGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: QILQVDSASWELGGLRSSAEPLA*AGVSEK
Trigger: CTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGC...GCTGGACCGGAGGCCACCCAGTTCCCAGGAAGCACTATCAACCTGCAGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS CCA 90 bp CATCATGGAATAGGAAGGAAGCGGGCGGTCTCCATACCCCACCTGTaGGTGGACTGCTGCCTCTGTCCAGCTCCTTTCCAAGTCACTACT +
Preference number: 5 (lower is better)
Translates to: HHGIGRKRAVSIPHL*VDCCLCPAPFQVTT
Trigger: AGTAGTGACTTGGAAAGGAGCTGGACAGAGGCAGCAGTCCACCCACAGGTGGGGTATGGAGACCGCCCGCTTCCTTCCTATTCCATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp GCTGCAAATTCTTGGAGAGCAGAATCCTCTAACTCCAGCAGCTGCTaGCTGGCAGGAATCCCAAGCGCAACTGAGGACAGCCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: AANSWRAESSNSSSC*LAGIPSATEDSQQP
Trigger: GGGCTGTTGGCTGTCCTCAGTTGCGCTTGGGATTCCTGCCAGCCAGCAGCTGCTGGAGTTAGAGGATTCTGCTCTCCAAGAATTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp CGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGGAGGGCTGTCCAGGCTaGGGGGAATATCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: RWSSERKPNEVSPGSCHEEGCPG*GEYHCG
Trigger: CCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTC...CTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS TCA 90 bp GCCCAAGGCAGGCTGTTTTTACGAGGCTGTTTGACAGGAAGGTTCTaGGCAGCCCATGGGGTGAGAGCTGACTTGCCCTGCATATGCTGT +
Preference number: 5 (lower is better)
Translates to: AQGRLFLRGCLTGRF*AAHGVRADLPCICC
Trigger: ACAGCATATGCAGGGCAAGTCAGCTCTCACCCCATGGGCTGCTCAGAACCTTCCTGTCAAACAGCCTCGTAAAAACAGCCTGCCTTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp CAAATTCTTGGAGAGCAGAATCCTCTAACTCCAGCAGCTGCTGGCTaGCAGGAATCCCAAGCGCAACTGAGGACAGCCAACAGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: QILGEQNPLTPAAAG*QESQAQLRTANSPE
Trigger: CTCTGGGCTGTTGGCTGTCCTCAGTTGCGCTTGGGATTCCTGCCAGCCAGCAGCTGCTGGAGTTAGAGGATTCTGCTCTCCAAGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGGAGGTGAAGAGTCTGTaGCAGGTAGAAACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SDPTGHGERGCSAPSPAEEVKSL*QVETGQ
Trigger: TTGCCCAGTTTCTACCTGCAACAGACTCTTCACCTC...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp TCAGATCCAACGGGACACGGGGAAAGAGGCTGTAGTGCACCTAGCCCTGCTGAGTGTGGCAAAATCAACTaGCCCACAAACCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: SDPTGHGERGCSAPSPAECGKIN*PTNPIP
Trigger: TGGGATGGGGTTTGTGGGCAAGTTGATTTTGCCACA...CTCAGCAGGGCTAGGTGCACTACAGCCTCTTTCCCCGTGTCCCGTTGGATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp CCCACCTGCAGAACCACTAGCATTGGCAGGTGTGTCAGAGAAGAGTaGAGCAAGATCCATGTTAGTGAGCTCACTTTGGCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PTCRTTSIGRCVREE*SKIHVSELTLAWAA
Trigger: AGCAGCCCAGGCCAAAGTGAGCTCACTAACATGGATCTTGCTGCACTCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 90 bp GTCAATAGTCAGGATTCCGGAGTTCAGAGCCTCATCCGACCCACCTaGAGAACCACTAGCATTGGCAGGTGTGTCAGAGAAGAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: VNSQDSGVQSLIRPT*RTTSIGRCVREECS
Trigger: GCTGCACTCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCTGAACTCCGGAATCCTGACTATTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp GAACCTCTGAAGGTGGCTTATGTCTCGACTCCTCTTCTAGGACTGGTCATGAGCACCGTAGTGAACTTCTaGCCACAGCCGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: EPLKVAYVSTPLLGLVMSTVVNF*PQPPTG
Trigger: TCCAGTGGGCGGCTGTGGCAAGAAGTTCACTACGGT...GCTCATGACCAGTCCTAGAAGAGGAGTCGAGACATAAGCCACCTTCAGAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CAA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCGAGTCCGGCTCCACCTaGATTGGAGCCAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPESGST*IGASSS
Trigger: GGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTC...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp GTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTCCTGAGTCCGGCTCCACCTaGATTGGAGCCAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: VKVIRTCQFQTCSPGLRPESGST*IGASSS
Trigger: GGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTC...AGGACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp TTAAGGCTCAGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTGGGCGGCTCGCCAGGTaGACACGGGAGCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: LRLRWVKVICQGHKNLSVGRLAR*TREPGS
Trigger: CGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCC...AACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCTGAGCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CAA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTGTGAGGCTCCTGCATaGCTCCCCGCTCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: STLLTKAVSKSIARTHSWCEAPA*LPAPLC
Trigger: GCAGAGAGGAGCGGGGAGCAATGCAGGAGCCTCACA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS GCA 90 bp CAACTGGGTGCACAAACCTTGGGTCCTCTGTACTTAGGCACAGCCTaGTGTCTTTTCTGGGTGCCTCAGGGCTCTTTTTCTTTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: QLGAQTLGPLYLGTA*CLFWVPQGSFSLKC
Trigger: GCACTTCAAAGAAAAAGAGCCCTGAGGCACCCAGAAAAGACAGCAGGCTGTGCCTAAGTACAGAGGACCCAAGGTTTGTGCACCCAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 90 bp TACTATTGGAGGTCAAAGCCAGTGGGTCGTCACTCAAGTTCTTCATaGGCAGAGCCACCAGACAGCCTAATGCTCCTGCACTCACAGTCT +
Preference number: 5 (lower is better)
Translates to: YYWRSKPVGRHSSSS*AEPPDSLMLLHSQS
Trigger: AGACTGTGAGTGCAGGAGCATTAGGCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTGACGACCCACTGGCTTTGACCTCCAATAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CCA 90 bp CGCCACCCACTCTGCTCCAGGGATCTGGAAAAGGAACTCAAGCTCTaGGCCTCAGCATTATCTACCTGTAAAATGGGAATGCTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RHPLCSRDLEKELKL*ASALSTCKMGMLVP
Trigger: TGGGACTAGCATTCCCATTTTACAGGTAGATAATGCTGAGGCCCAGAGCTTGAGTTCCTTTTCCAGATCCCTGGAGCAGAGTGGGTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp AATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGGAAGGTGTGTCCTAGACGCTTTATCATACTGCTaGCTGCACCCAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: NEVSPGSCHESQGRCVLDALSYC*LHPGKE
Trigger: CTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAGC...GTCTAGGACACACCTTCCCTGAGACTCATGACATGAGCCTGGGGAGACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTACCGTAGTGAACTTCTaGCCACAGCCGCCCACTGGA +
Preference number: 5 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSTVVNF*PQPPTG
Trigger: TCCAGTGGGCGGCTGTGGCAAGAAGTTCACTACGGT...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CAA 90 bp TCTTCTGAACGGAAACCAAATGAGGTCTCCCCAGGCTCATGTCATGAGTCTCAGGCAGAACCACTAGCATaGGCAGGTGTGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SSERKPNEVSPGSCHESQAEPLA*AGVSEK
Trigger: CTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGC...CTGAGACTCATGACATGAGCCTGGGGAGACCTCATTTGGTTTCCGTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp AAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCCCGAGGTGAAGAGTCTGTaGCAGGTAGAAACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: KSQKGYAGLLNGNQMRSPEVKSL*QVETGQ
Trigger: TTGCCCAGTTTCTACCTGCAACAGACTCTTCACCTC...GGGAGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp TTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTGCAGAACCACTAGCATaGGCAGGTGTGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FVKVIRTCQFQTCSPGLRAEPLA*AGVSEK
Trigger: CTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGC...ACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGGAGGGCTGTCCAGGCTaGGGGGAATATCACTGTGGG +
Preference number: 5 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLEGCPG*GEYHCG
Trigger: CCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTC...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp GAGCCACAGGACTCCAAAGGACCTCAGAAAGCATTTAGCCAAATCTCCTTATGCGCTGCTAAGTTACTATaGGAGGTCAAAGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EPQDSKGPQKAFSQISLCAAKLL*EVKASG
Trigger: CCCACTGGCTTTGACCTCCAATAGTAACTTAGCAGC...GCATAAGGAGATTTGGCTAAATGCTTTCTGAGGTCCTTTGGAGTCCTGTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp AGATGGGTTAAGGTGATTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGGAGTCCGGCTCCACCTaGATTGGAGCCAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RWVKVICQGHKNLSVPDLESGST*IGASSS
Trigger: GGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTC...CAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAATCACCTTAACCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTCTCGGTAATCAGTTCTaGCTGAGCCCCCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSLGNQF*LSPHFP
Trigger: TGGAAAGTGGGGGCTCAGCAAGAACTGATTACCGAG...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS-3UTR CAA 90 bp CAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAATGAGGTCTTGCAGATCCTGCAGGTaGATAGTGCTTCCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: QKSQKGYAGLLNGNQMRSCRSCR*IVLPGN
Trigger: GTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCA...AGACCTCATTTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS CCA 90 bp TCTGTTCATCCATCAGTGTTCCAGAAAACCCAGCAACCCTCGCTCTaGATCATCTCTGACTGTTCTCCACGCCTGGTTTCTCTTTTTCTA +
Preference number: 5 (lower is better)
Translates to: SVHPSVFQKTQQPSL*IISDCSPRLVSLFL
Trigger: TAGAAAAAGAGAAACCAGGCGTGGAGAACAGTCAGAGATGATCCAGAGCGAGGGTTGCTGGGTTTTCTGGAACACTGATGGATGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp TTTGTCAAGGTCATAAGAACTTGTCAGTTCCAGACTTGTAGTCCAGGGCTGCGTGCTTTATCATACTGCTaGCTGCACCCAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: FVKVIRTCQFQTCSPGLRALSYC*LHPGKE
Trigger: CTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAGC...ACGCAGCCCTGGACTACAAGTCTGGAACTGACAAGTTCTTATGACCTTGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS-3UTR CAA 90 bp AAATGTACCCAAAAGTCTCAAAAGGGCTACGCTGGTCTTCTGAACGGAAACCAAACCAACTGTTCTGGCTaGCATGGAAATGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KCTQKSQKGYAGLLNGNQTNCSG*HGNGED
Trigger: GTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGT...TTGGTTTCCGTTCAGAAGACCAGCGTAGCCCTTTTGAGACTTTTGGGTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp ATCCAGAATATCCTCAAGACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACACCAACTGTTCTGGCTaGCATGGAAATGGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: IQNILKTEYERSDLYGGDTNCSG*HGNGED
Trigger: GTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGT...GTCACCACCATATAGGTCACTTCTCTCATACTCGGTCTTGAGGATATTCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CAA 90 bp ATCCAGAATATCCTCAAGACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACTGCAGATCCTGCAGGTaGATAGTGCTTCCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: IQNILKTEYERSDLYGGDCRSCR*IVLPGN
Trigger: GTTCCCAGGAAGCACTATCAACCTGCAGGATCTGCA...GTCACCACCATATAGGTCACTTCTCTCATACTCGGTCTTGAGGATATTCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515545.5
CDS-3UTR CAA 90 bp AGCACTTTGCTCACAAAGGCAGTTTCAAAGAGTATAGCCCGAACTCATTCCTGGTGTGGCAAAATCAACTaGCCCACAAACCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: STLLTKAVSKSIARTHSWCGKIN*PTNPIP
Trigger: TGGGATGGGGTTTGTGGGCAAGTTGATTTTGCCACA...CCAGGAATGAGTTCGGGCTATACTCTTTGAAACTGCCTTTGTGAGCAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389709.8
ENST00000515545.5
CDS-3UTR CAA 90 bp GACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAGCAGGAAAAGAGCTCTaGTTCCCTGAAGTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: DKHRGKVSQHYKTPNLQGAGKEL*FPEVGS
Trigger: CGAGCCCACTTCAGGGAACAAGAGCTCTTTTCCTGC...TCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS GCA 90 bp GGTTTCTGGGTAACACAGATTCAGTTCCCCCTCACTGCAGGGAGATaGACTTCCATTACAAAATACTTCCTTTCTGTTCATCCATCAGTG +
Preference number: 5 (lower is better)
Translates to: GFWVTQIQFPLTAGR*TSITKYFLSVHPSV
Trigger: CACTGATGGATGAACAGAAAGGAAGTATTTTGTAATGGAAGTGCATCTCCCTGCAGTGAGGGGGAACTGAATCTGTGTTACCCAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS-3UTR CAA 90 bp TCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACCATGGAGGAGGTGAAGAGTCTGTaGCAGGTAGAAACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SQHYKTPNLQGKEHITMEEVKSL*QVETGQ
Trigger: TTGCCCAGTTTCTACCTGCAACAGACTCTTCACCTC...CTCCATGGTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CAA 90 bp GCTGACAAGCATAGAGGCAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGCTTTATCATACTGCTaGCTGCACCCAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ADKHRGKVSQHYKTPNLQALSYC*LHPGKE
Trigger: CTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAGC...TTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTGCCTCTATGCTTGTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS-3UTR CAA 90 bp CAAAGTATCTCAACATTACAAAACCCCCAATCTTCAAGGAAAGGAGCACATTACGCTGCTAAGTTACTATaGGAGGTCAAAGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QSISTLQNPQSSRKGAHYAAKLL*EVKASG
Trigger: CCCACTGGCTTTGACCTCCAATAGTAACTTAGCAGC...GTAATGTGCTCCTTTCCTTGAAGATTGGGGGTTTTGTAATGTTGAGATACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336332.5
CDS CAA 90 bp CCAAGAAAGAGTCGCCGTCGCTGTCGTCCTCGGCGGGCGGCGGGCTaGGCCCGGAGGCCTCCCCGGGCCGCGCCCCGGGCCCGCCATCTT +
Preference number: 6 (lower is better)
Translates to: PRKSRRRCRPRRAAG*ARRPPRAAPRARHL
Trigger: AAGATGGCGGGCCCGGGGCGCGGCCCGGGGAGGCCTCCGGGCCAAGCCCGCCGCCCGCCGAGGACGACAGCGACGGCGACTCTTTCTTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS TCA 72 bp CGCCAGGTTGACACGGGAGCCAGGCTCGGCCTCCTGTaGTCCGGCAGCCTCGGCGGCAGCGCCGCCGTGCGG +
Preference number: 6 (lower is better)
Translates to: RQVDTGARLGLL*SGSLGGSAAVR
Trigger: CCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCACAGGAGGCCGAGCCTGGCTCCCGTGTCAACCTGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS CCA 72 bp GGCCTGTGTGACTGGCCAGCTCTCACCTGCACCAGCTaGACCTGGACGCCCTGCGCCCCGCACTGCACCCCA +
Preference number: 6 (lower is better)
Translates to: GLCDWPALTCTS*TWTPCAPHCTP
Trigger: TGGGGTGCAGTGCGGGGCGCAGGGCGTCCAGGTCCAGCTGGTGCAGGTGAGAGCTGGCCAGTCACACAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp TCCTGTGATCCGGCAGCCTCGGCGGCAGCGCCGCCGTaGGGCACTTCCAGCAGCACCAAGAAAGAGTCGCCG +
Preference number: 6 (lower is better)
Translates to: SCDPAASAAAPP*GTSSSTKKESP
Trigger: CGGCGACTCTTTCTTGGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCACAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000389709.8
CDS CAA 72 bp CGGGCCCCACAGAGGGCCTTCCCTGCATGCCCCAGCTaGCCTACGGGCCAGCTGGAAGGACCAGGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: RAPQRAFPACPS*PTGQLEGPGQV
Trigger: TACCTGCCCTGGTCCTTCCAGCTGGCCCGTAGGCAAGCTGGGGCATGCAGGGAAGGCCCTCTGTGGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp GGCAGGGGATGCAGCATGCCGCACACTGCTCAGACCTaGGTGACCCTCCCACCCCGCCTACAGCTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: GRGCSMPHTAQT*VTLPPRLQLAC
Trigger: ACAGGCCAGCTGTAGGCGGGGTGGGAGGGTCACGCAGGTCTGAGCAGTGTGCGGCATGCTGCATCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp CCTGGGCACCGTGCTGCTCTGCTGGACTGGGCAACGTaGACTGGGGCAGCCCATGGCTTCCTTCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PGHRAALLDWAT*TGAAHGFLPAA
Trigger: GGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp AACGTGGACTGGGGCAGCCCATGGCTTCCTTCCTGCTaGCCAACTGCTCCTGGGCGAGAAGGCGAGTCCGGC +
Preference number: 6 (lower is better)
Translates to: NVDWGSPWLPSC*PTAPGREGESG
Trigger: GCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGGAAGCCATGGGCTGCCCCAGTCCACGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp GTGCCTGCACTGAGCTCTGTGTCCTGGGCACCGTGCTaGTCTGCTGGACTGGGCAACGTGGACTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VPALSSVSWAPC*SAGLGNVDWGS
Trigger: GCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAGTGCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp CCAGTGCCTGCACTGAGCTCTGTGTCCTGGGCACCGTaGTGCTCTGCTGGACTGGGCAACGTGGACTGGGGC +
Preference number: 6 (lower is better)
Translates to: PVPALSSVSWAP*CSAGLGNVDWG
Trigger: GCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAGTGCAGGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp TCCAGCAAATCCTCGGGCCCCACAGAGGGCCTTCCCTaGATGCCCCAGCTTGCCTACGGGCCAGCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: SSKSSGPTEGLP*MPQLAYGPAGR
Trigger: CCTTCCAGCTGGCCCGTAGGCAAGCTGGGGCATGCAGGGAAGGCCCTCTGTGGGGCCCGAGGATTTGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp TCAGAGCCAGCGTCACCTCCACCCTCCGCACTTCCGTaGGGCCTGCAACCGCATCCCCTGCCACAGGGAATC +
Preference number: 6 (lower is better)
Translates to: SEPASPPPSALP*GLQPHPLPQGI
Trigger: GATTCCCTGTGGCAGGGGATGCGGTTGCAGGCCCCACGGAAGTGCGGAGGGTGGAGGTGACGCTGGCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp TGCACTGAGCTCTGTGTCCTGGGCACCGTGCTGCTCTaGTGGACTGGGCAACGTGGACTGGGGCAGCCCATG +
Preference number: 6 (lower is better)
Translates to: CTELCVLGTVLL*WTGQRGLGQPM
Trigger: CATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTCAGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp GGGAGGCGGGCTACTCTGGGGCTAGACGCAGGGCTGTaGACAGACAGGTTCAGGAAGTGGATGCACGGTCCC +
Preference number: 6 (lower is better)
Translates to: GRRATLGLDAGL*TDRFRKWMHGP
Trigger: GGGACCGTGCATCCACTTCCTGAACCTGTCTGTGCACAGCCCTGCGTCTAGCCCCAGAGTAGCCCGCCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp GCTCTGTGTCCTGGGCACCGTGCTGCTCTGCTGGACTaGGCAACGTGGACTGGGGCAGCCCATGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: ALCPGHRAALLD*ATWTGAAHGFL
Trigger: AAGGAAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CCA 72 bp GCCTCAAACAGATCTCATCCTGCTGCAAAACAGCCCTaGGGGCCTCGGGCAGGGAGGCGGGCTACTCTGGGG +
Preference number: 6 (lower is better)
Translates to: ASNRSHPAAKQP*GPRAGRRATLG
Trigger: CCCCAGAGTAGCCCGCCTCCCTGCCCGAGGCCCCCAGGGCTGTTTTGCAGCAGGATGAGATCTGTTTGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 90 bp GGCCGCCCTAGAAATGGGGTGGCTGAGACGGCCTGCGGAGCCCTTTaGCCCCAGCCCTGCAGAAGAAGGGCAGGGTGGCCTCAAACAGAT +
Preference number: 6 (lower is better)
Translates to: GRPRNGVAETACGAL*PQPCRRRAGWPQTD
Trigger: ATCTGTTTGAGGCCACCCTGCCCTTCTTCTGCAGGGCTGGGGCAAAAGGGCTCCGCAGGCCGTCTCAGCCACCCCATTTCTAGGGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp CAGCGTCACCTCCACCCTCCGCACTTCCGTGGGGCCTaGAACCGCATCCCCTGCCACAGGGAATCTACAAAG +
Preference number: 6 (lower is better)
Translates to: QRHLHPPHFRGA*NRIPCHRESTK
Trigger: CTTTGTAGATTCCCTGTGGCAGGGGATGCGGTTGCAGGCCCCACGGAAGTGCGGAGGGTGGAGGTGACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp CACACTTCGCCTGTCCTGCACCTGCATGTCCGCCCATaGCCATTCACACCCCGAAGCGGAGCTCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: HTSPVLHLHVRP*PFTPRSGAPGA
Trigger: AGCACCAGGAGCTCCGCTTCGGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 72 bp TGGCTGCTGTCCCGAGAACCAGAGGGCTGTCCAGGCTaGGGGGAATATCACTGTGGGCCACCAGGACCAGGG +
Preference number: 6 (lower is better)
Translates to: WLLSREPEGCPG*GEYHCGPPGPG
Trigger: CCCTGGTCCTGGTGGCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTCTGGTTCTCGGGACAGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 72 bp GCAGGTGCCCTGGCACGCCCTGTACCCCCACCAACCTaGTGTACCCAGAGTGCTCTCCAGCAAATCCTCGGG +
Preference number: 6 (lower is better)
Translates to: AGALARPVPPPT*CTQSALQQILG
Trigger: CCCGAGGATTTGCTGGAGAGCACTCTGGGTACACAAGGTTGGTGGGGGTACAGGGCGTGCCAGGGCACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 90 bp GCAGAACCGTGGCTGCTGTCCCGAGAACCAGAGGGCTGTCCAGGCTaGGGGGAATATCACTGTGGGCCACCAGGACCAGGGGTTCCATCG +
Preference number: 6 (lower is better)
Translates to: AEPWLLSREPEGCPG*GEYHCGPPGPGVPS
Trigger: CGATGGAACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 90 bp TGCTGCCCAACTGCTCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTaGATTGGAGCCAGCAGTTCCGGGACACTGGCATTTTCTCGGGGG +
Preference number: 6 (lower is better)
Translates to: CCPTAPGREGESGST*IGASSSGTLAFSRG
Trigger: CCCCCGAGAAAATGCCAGTGTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 90 bp CAACTCCTTGCAGGTGCCCTGGCACGCCCTGTACCCCCACCAACCTaGTGTACCCAGAGTGCTCTCCAGCAAATCCTCGGGCCCCACAGA +
Preference number: 6 (lower is better)
Translates to: QLLAGALARPVPPPT*CTQSALQQILGPHR
Trigger: TCTGTGGGGCCCGAGGATTTGCTGGAGAGCACTCTGGGTACACAAGGTTGGTGGGGGTACAGGGCGTGCCAGGGCACCTGCAAGGAGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp CCTCTGGTCCTGACTCTGTACCTCTGCCCTGCCAGCTaGGGCAGTGTTTCCTTGGATGGTCCTCCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PLVLTLYLCPAS*GSVSLDGPPPP
Trigger: GGGAGGGGGAGGACCATCCAAGGAAACACTGCCTCAGCTGGCAGGGCAGAGGTACAGAGTCAGGACCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp ATCCACACTGAAGCTGCCCTGCTGCAGAACCGTGGCTaGTGTCCCGAGAACCAGAGGGCTGTCCAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: IHTEAALLQNRG*CPENQRAVQAW
Trigger: CCAAGCCTGGACAGCCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp GAAGAAGGGCAGGGTGGCCTCAAACAGATCTCATCCTaGTGCAAAACAGCCCTGGGGGCCTCGGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: EEGQGGLKQISS*CKTALGASGRE
Trigger: CTCCCTGCCCGAGGCCCCCAGGGCTGTTTTGCAGCAGGATGAGATCTGTTTGAGGCCACCCTGCCCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp CTGCCGGTGGCACCAGCTTCCCTACCGTCTCCCTATTaGCAAGCCTCTGGTCCTGACTCTGTACCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LPVAPASLPSPY*QASGPDSVPLP
Trigger: GGGCAGAGGTACAGAGTCAGGACCAGAGGCTTGGCAATAGGGAGACGGTAGGGAAGCTGGTGCCACCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp GCCGAGGGCAGGACACCTTCGCCGGAGGGGTCATCCTaGGAAGGCAACACAGAAAGGCCTGTCACATGTCTG +
Preference number: 6 (lower is better)
Translates to: AEGRTPSPEGSS*EGNTERPVTCL
Trigger: CAGACATGTGACAGGCCTTTCTGTGTTGCCTTCCCAGGATGACCCCTCCGGCGAAGGTGTCCTGCCCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp CTGCTCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTTaGTTGGAGCCAGCAGTTCCGGGACACTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: LLLGEKASPAPP*LEPAVPGHWHF
Trigger: AAAATGCCAGTGTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS TCA 72 bp CAGCAGCTGCTGGCTGGCAGGAATCCCAAGCGCAACTaGGGACAGCCAACAGCCCAGAGCCACAGCATCATG +
Preference number: 6 (lower is better)
Translates to: QQLLAGRNPKRN*GQPTAQSHSIM
Trigger: CATGATGCTGTGGCTCTGGGCTGTTGGCTGTCCTCAGTTGCGCTTGGGATTCCTGCCAGCCAGCAGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp TCCTGCCCCTCTCTAAGACAAGCTTCAGCCCCCATCTaGCGCTCACCGCTAGCTTCCAACCAGCACAGGGCC +
Preference number: 6 (lower is better)
Translates to: SCPSLRQASAPI*RSPLASNQHRA
Trigger: GGCCCTGTGCTGGTTGGAAGCTAGCGGTGAGCGTCAGATGGGGGCTGAAGCTTGTCTTAGAGAGGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp ACAGTCTGCACGTCATCCACACTGAAGCTGCCCTGCTaGAGAACCGTGGCTGCTGTCCCGAGAACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: TVCTSSTLKLPC*RTVAAVPRTRG
Trigger: CCCTCTGGTTCTCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp CCTCCGCACTTCCGTGGGGCCTGCAACCGCATCCCCTaGCACAGGGAATCTACAAAGTGGAGTGGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: PPHFRGACNRIP*HRESTKWSGEE
Trigger: CTCTTCACCACTCCACTTTGTAGATTCCCTGTGGCAGGGGATGCGGTTGCAGGCCCCACGGAAGTGCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp ACTGATTTCCCTCCTAAGGCACGCTCCTCAACTCCTTaGAGGTGCCCTGGCACGCCCTGTACCCCCACCAAC +
Preference number: 6 (lower is better)
Translates to: TDFPPKARSSTP*RCPGTPCTPTN
Trigger: GTTGGTGGGGGTACAGGGCGTGCCAGGGCACCTGCAAGGAGTTGAGGAGCGTGCCTTAGGAGGGAAATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp TCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTTGATTaGAGCCAGCAGTTCCGGGACACTGGCATTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SWARRRVRLHLD*SQQFRDTGIFS
Trigger: CGAGAAAATGCCAGTGTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 72 bp ACTGCTCCTGGGCGAGAAGGCGAGTCCGGCTCCACCTaGATTGGAGCCAGCAGTTCCGGGACACTGGCATTT +
Preference number: 6 (lower is better)
Translates to: TAPGREGESGST*IGASSSGTLAF
Trigger: AAATGCCAGTGTCCCGGAACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp AACTTCATCTGTCCCACACTTCGCCTGTCCTGCACCTaGATGTCCGCCCATGGCCATTCACACCCCGAAGCG +
Preference number: 6 (lower is better)
Translates to: NFICPTLRLSCT*MSAHGHSHPEA
Trigger: CGCTTCGGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTGGGACAGATGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp ATAGGAAGGAAGCGGGCGGTCTCCATACCCCACCTGTaGGTGGACTGCTGCCTCTGTCCAGCTCCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: IGRKRAVSIPHL*VDCCLCPAPFQ
Trigger: TTGGAAAGGAGCTGGACAGAGGCAGCAGTCCACCCACAGGTGGGGTATGGAGACCGCCCGCTTCCTTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 90 bp GCCCACCCCCTGTATTCCAAGGGAGGCCCGAGGACCCAGCAGGAATaGTTTATGGGGGCTGGGTACTACCTGTTCCCACCTGGTTCTCAT +
Preference number: 6 (lower is better)
Translates to: AHPLYSKGGPRTQQE*FMGAGYYLFPPGSH
Trigger: ATGAGAACCAGGTGGGAACAGGTAGTACCCAGCCCCCATAAACAATTCCTGCTGGGTCCTCGGGCCTCCCTTGGAATACAGGGGGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp GCCACCAGACAGCCTAATGCTCCTGCACTCACAGTCTaGACGTCATCCACACTGAAGCTGCCCTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: ATRQPNAPALTV*TSSTLKLPCCR
Trigger: TCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGGAGCATTAGGCTGTCTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp GCTAGAAACTTCATCTGTCCCACACTTCGCCTGTCCTaGACCTGCATGTCCGCCCATGGCCATTCACACCCC +
Preference number: 6 (lower is better)
Translates to: ARNFICPTLRLS*TCMSAHGHSHP
Trigger: GGGGTGTGAATGGCCATGGGCGGACATGCAGGTGCAGGACAGGCGAAGTGTGGGACAGATGAAGTTTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp TCCTCGTCTCACCTGAGAAGTCTCCTCCAGCTGCAATaGGTGGCAGAACCAGCCCACCCCCTGTATTCCAAG +
Preference number: 6 (lower is better)
Translates to: SSSHLRSLLQLQ*VAEPAHPLYSK
Trigger: CTTGGAATACAGGGGGTGGGCTGGTTCTGCCACGCATTGCAGCTGGAGGAGACTTCTCAGGTGAGACGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp CTAGACGCAGGGCTGTGCACAGACAGGTTCAGGAAGTaGATGCACGGTCCCAGCAACACTCAGAGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: LDAGLCTDRFRK*MHGPSNTQSLS
Trigger: GCTCAAGCTCTGAGTGTTGCTGGGACCGTGCATCCACTTCCTGAACCTGTCTGTGCACAGCCCTGCGTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp GGAAGTGGATGCACGGTCCCAGCAACACTCAGAGCTTaGGCAGATGCAGGACAGGCTGGGAAAAAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: GSGCTVPATLRA*ADAGQAGKKGG
Trigger: TCCTCCCTTTTTCCCAGCCTGTCCTGCATCTGCTCAAGCTCTGAGTGTTGCTGGGACCGTGCATCCACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 72 bp CTGTATTCCAAGGGAGGCCCGAGGACCCAGCAGGAATaGTTTATGGGGGCTGGGTACTACCTGTTCCCACCT +
Preference number: 6 (lower is better)
Translates to: LYSKGGPRTQQE*FMGAGYYLFPP
Trigger: AGGTGGGAACAGGTAGTACCCAGCCCCCATAAACAATTCCTGCTGGGTCCTCGGGCCTCCCTTGGAATACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp AGGCTGTTTTTACGAGGCTGTTTGACAGGAAGGTTCTaGGCAGCCCATGGGGTGAGAGCTGACTTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RLFLRGCLTGRF*AAHGVRADLPC
Trigger: GCAGGGCAAGTCAGCTCTCACCCCATGGGCTGCTCAGAACCTTCCTGTCAAACAGCCTCGTAAAAACAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp TGGTCCTGTTTCCTTGGCGAGACTCTCCCAGGACTCTaGACCCACAAACGTGCCTGTTTCCCAACTCAGAGC +
Preference number: 6 (lower is better)
Translates to: WSCFLGETLPGL*THKRACFPTQS
Trigger: GCTCTGAGTTGGGAAACAGGCACGTTTGTGGGTTCAGAGTCCTGGGAGAGTCTCGCCAAGGAAACAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS GCA 72 bp CAGGATTCCGGAGTTCAGAGCCTCATCCGACCCACCTaGAGAACCACTAGCATTGGCAGGTGTGTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: QDSGVQSLIRPT*RTTSIGRCVRE
Trigger: TTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCTGAACTCCGGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp AGTTTAGGCACTGTCACTGCTCTGCCCACACATCCCTaGCTGGATGTGTGGGATCCAGCTATGAACGGCTTC +
Preference number: 6 (lower is better)
Translates to: SLGTVTALPTHP*LDVWDPAMNGF
Trigger: GAAGCCGTTCATAGCTGGATCCCACACATCCAGGCAGGGATGTGTGGGCAGAGCAGTGACAGTGCCTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CCA 72 bp AGGTCAAAGCCAGTGGGTCGTCACTCAAGTTCTTCATaGGCAGAGCCACCAGACAGCCTAATGCTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: RSKPVGRHSSSS*AEPPDSLMLLH
Trigger: GTGCAGGAGCATTAGGCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTGACGACCCACTGGCTTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 72 bp AGAGCCTCATCCGACCCACCTGCAGAACCACTAGCATaGGCAGGTGTGTCAGAGAAGAGTGCAGCAAGATCC +
Preference number: 6 (lower is better)
Translates to: RASSDPPAEPLA*AGVSEKSAARS
Trigger: GGATCTTGCTGCACTCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 90 bp CCGGAGTTCAGAGCCTCATCCGACCCACCTGCAGAACCACTAGCATaGGCAGGTGTGTCAGAGAAGAGTGCAGCAAGATCCATGTTAGTG +
Preference number: 6 (lower is better)
Translates to: PEFRASSDPPAEPLA*AGVSEKSAARSMLV
Trigger: CACTAACATGGATCTTGCTGCACTCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCTGAACTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS GCA 72 bp GCACAAACCTTGGGTCCTCTGTACTTAGGCACAGCCTaGTGTCTTTTCTGGGTGCCTCAGGGCTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: AQTLGPLYLGTA*CLFWVPQGSFS
Trigger: AGAAAAAGAGCCCTGAGGCACCCAGAAAAGACAGCAGGCTGTGCCTAAGTACAGAGGACCCAAGGTTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS CAA 90 bp GTGCTCGAAGAGGTCGGTGTGGTGATATGTGCTGCTAAGTTACTATaGGAGGTCAAAGCCAGTGGGTCGTCACTCAAGTTCTTCATGGGC +
Preference number: 6 (lower is better)
Translates to: VLEEVGVVICAAKLL*EVKASGSSLKFFMG
Trigger: GCCCATGAAGAACTTGAGTGACGACCCACTGGCTTTGACCTCCAATAGTAACTTAGCAGCACATATCACCACACCGACCTCTTCGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS CAA 72 bp TTTCCTTGGCTAGTTGAATGGCTCGGTAATCAGTTCTaGCTGAGCCCCCACTTTCCAAATAGAAGTTGCCAG +
Preference number: 6 (lower is better)
Translates to: FPWLVEWLGNQF*LSPHFPNRSCQ
Trigger: CTGGCAACTTCTATTTGGAAAGTGGGGGCTCAGCAAGAACTGATTACCGAGCCATTCAACTAGCCAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389709.8
CDS GCA 72 bp AGGTTTCTGGGTAACACAGATTCAGTTCCCCCTCACTaGAGGGAGATGCACTTCCATTACAAAATACTTCCT +
Preference number: 6 (lower is better)
Translates to: RFLGNTDSVPPH*REMHFHYKILP
Trigger: AGGAAGTATTTTGTAATGGAAGTGCATCTCCCTGCAGTGAGGGGGAACTGAATCTGTGTTACCCAGAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp CAAATAAATGGTCTTTCACCTGTATGGCTCCGCAGGTaGATTTTCAGCCGACAGGCTTTATCATACTGCTTG +
Preference number: 6 (lower is better)
Translates to: QINGLSPVWLRR*IFSRQALSYCL
Trigger: CAAGCAGTATGATAAAGCCTGTCGGCTGAAAATTCACCTGCGGAGCCATACAGGTGAAAGACCATTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336332.5
ENST00000389709.8
ENST00000515545.5
CDS TCA 72 bp ACCGAGTATGAGAGAAGTGACCTATATGGTGGTGACTaGATAGAGTGCTTCATACCAAATAGAAGTTGCCAG +
Preference number: 6 (lower is better)
Translates to: TEYERSDLYGGD*IECFIPNRSCQ
Trigger: CTGGCAACTTCTATTTGGTATGAAGCACTCTATTCAGTCACCACCATATAGGTCACTTCTCTCATACTCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336332.5
ENST00000515545.5
CDS GCA 72 bp GTAACACAGATTCAGTTCCCCCTCACTGCAGGGAGATaGACTTCCATTACAAAATACTTCCTTTCTGTTCAT +
Preference number: 6 (lower is better)
Translates to: VTQIQFPLTAGR*TSITKYFLSVH
Trigger: ATGAACAGAAAGGAAGTATTTTGTAATGGAAGTGCATCTCCCTGCAGTGAGGGGGAACTGAATCTGTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514463.1
CDS TCA 72 bp TCGGAAGGTTTTGGAGAGGATTTCATAGGAAATATGTaGTCAAAACTTAGAACAGTGACTGGCGAGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SEGFGEDFIGNM*SKLRTVTGECQ
Trigger: TTGGCACTCGCCAGTCACTGTTCTAAGTTTTGATCACATATTTCCTATGAAATCCTCTCCAAAACCTTCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514463.1