Pregenerated sensors for ZXDB (Homo sapiens)
Ensembl gene IDs: ENSG00000198455Ensembl transcript IDs: ENST00000374888.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAAGATGGTGACAAACTGATCGAATGGAGAGATACGCTCTTATaGATGTGGGCAATGTCCCCACTCCTGGTATTACCCACAGCAATT | + |
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Preference number: 1 (lower is better) Translates to: SKDGDKLIEWRDTLL*MWAMSPLLVLPTAI Trigger: AATTGCTGTGGGTAATACCAGGAGTGGGGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CCA 90 bp | GATGGTGACAAACTGATCGAATGGAGAGATACGCTCTTATGCATGTaGGCAATGTCCCCACTCCTGGTATTACCCACAGCAATTCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: DGDKLIEWRDTLLCM*AMSPLLVLPTAILR Trigger: TCTAAGAATTGCTGTGGGTAATACCAGGAGTGGGGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR TCA 90 bp | ACAGAGAAGCCTGACTTTCAAAACAGAGCAAAGATGGTGACAAACTaGTCGAATGGAGAGATACGCTCTTATGCATGTGGGCAATGTCCC | + |
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Preference number: 1 (lower is better) Translates to: TEKPDFQNRAKMVTN*SNGEIRSYACGQCP Trigger: GGGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATCTTTGCTCTGTTTTGAAAGTCAGGCTTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 90 bp | GGGTCTGTTTCATGTCAAAGTCCTGGCTGGCAATTTCCACAAAACTaGCTTCCATCATCAAAAGAAGTTAGGAAGATAAACAGTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: GSVSCQSPGWQFPQN*LPSSKEVRKINSEN Trigger: GTTCTCACTGTTTATCTTCCTAACTTCTTTTGATGATGGAAGGCAGTTTTGTGGAAATTGCCAGCCAGGACTTTGACATGAAACAGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 90 bp | GCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCACATaGAAACACTACTGGACTAGTACACTAGAGCAAATAAGAGAGTAT | + |
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Preference number: 1 (lower is better) Translates to: ALPKCYNNCHPQTST*KHYWTSTLEQIREY Trigger: ATACTCTCTTATTTGCTCTAGTGTACTAGTCCAGTAGTGTTTGCATGTGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 90 bp | ACACACAATAAAGAAACATTTCATAGTGGCAAAATTTTAGTGCACTaGCAAAGTGCTACAATAACTGTCATCCACAGACATCCACATGCA | + |
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Preference number: 1 (lower is better) Translates to: THNKETFHSGKILVH*QSATITVIHRHPHA Trigger: TGCATGTGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTTGCCACTATGAAATGTTTCTTTATTGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAAGATGGTGACAAACTaGTCGAATGGAGAGATACGC | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPKMVTN*SNGEIR Trigger: GCGTATCTCTCCATTCGATCAGTTTGTCACCATCTT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCACGCATGCCACATCACTaGAAAACGTCCTCATATTTT | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPRMPHH*KTSSYF Trigger: AAAATATGAGGACGTTTTTCAGTGATGTGGCATGCG...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCATTCACAGGGTTGTTCTaGACAACGAGACACAAATTG | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPFTGLF*TTRHKL Trigger: CAATTTGTGTCTCGTTGTTCAGAACAACCCTGTGAA...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR GCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCATGTAGTCCAGGGCTGTaGTCTTTTTGCAAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPCSPGL*SFCKPK Trigger: TTTTGGTTTGCAAAAAGAGCACAGCCCTGGACTACA...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCATACAAGTGCAAACAATaGGATCTACAGAGCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPYKCKQ*DLQSTE Trigger: TTCTGTGCTCTGTAGATCTCATTGTTTGCACTTGTA...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR GCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGGGCTGTGCTCTTTTTaGAAACCAAAAAGAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPGLCSF*KPKRND Trigger: GTCATTTCTTTTTGGTTTGCAAAAAGAGCACAGCCC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAGTTGGAATGGGAGTTaGCTAAATTACATGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: KILVHCQSATITVIHRHPSWNGS*LNYMKC Trigger: ACATTTCATGTAATTTAGCCAACTCCCATTCCAACT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 72 bp | GGTGACAAACTGATCGAATGGAGAGATACGCTCTTATaGATGTGGGCAATGTCCCCACTCCTGGTATTACCC | + |
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Preference number: 3 (lower is better) Translates to: GDKLIEWRDTLL*MWAMSPLLVLP Trigger: GGGTAATACCAGGAGTGGGGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR TCA 72 bp | TCAAATGGAAAACAGCGACTAACCTTGACACAGGAATaGATCATGAAGGCTGGATGGGTAGACTGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SNGKQRLTLTQE*IMKAGWVDWEG Trigger: CCCCTCCCAGTCTACCCATCCAGCCTTCATGATTCATTCCTGTGTCAAGGTTAGTCGCTGTTTTCCATTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CCA 72 bp | AAACTGATCGAATGGAGAGATACGCTCTTATGCATGTaGGCAATGTCCCCACTCCTGGTATTACCCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: KLIEWRDTLLCM*AMSPLLVLPTA Trigger: TGCTGTGGGTAATACCAGGAGTGGGGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CCA 72 bp | GCGACTAACCTTGACACAGGAATGAATCATGAAGGCTaGATGGGTAGACTGGGAGGGGTGAAAAGAATGTAT | + |
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Preference number: 3 (lower is better) Translates to: ATNLDTGMNHEG*MGRLGGVKRMY Trigger: ATACATTCTTTTCACCCCTCCCAGTCTACCCATCCAGCCTTCATGATTCATTCCTGTGTCAAGGTTAGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR TCA 72 bp | CCTGACTTTCAAAACAGAGCAAAGATGGTGACAAACTaGTCGAATGGAGAGATACGCTCTTATGCATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: PDFQNRAKMVTN*SNGEIRSYACG Trigger: CCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATCTTTGCTCTGTTTTGAAAGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CCA 72 bp | TTTAGCCCTGGGTCTGTTTCATGTCAAAGTCCTGGCTaGCAATTTCCACAAAACTGCCTTCCATCATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: FSPGSVSCQSPG*QFPQNCLPSSK Trigger: TTTTGATGATGGAAGGCAGTTTTGTGGAAATTGCCAGCCAGGACTTTGACATGAAACAGACCCAGGGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CCA 72 bp | TCAAAACAGAGCAAAGATGGTGACAAACTGATCGAATaGAGAGATACGCTCTTATGCATGTGGGCAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SKQSKDGDKLIE*RDTLLCMWAMS Trigger: GGACATTGCCCACATGCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATCTTTGCTCTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR TCA 72 bp | CAGAGAAGCCTGACTTTCAAAACAGAGCAAAGATGGTaGCAAACTGATCGAATGGAGAGATACGCTCTTATG | + |
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Preference number: 3 (lower is better) Translates to: QRSLTFKTEQRW*QTDRMERYALM Trigger: CATAAGAGCGTATCTCTCCATTCGATCAGTTTGTCACCATCTTTGCTCTGTTTTGAAAGTCAGGCTTCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CAA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCATCAGGGTCACACAACTaGTCAGTTCCAAACTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: KILVHCQSATITVIHRHPSGSHN*SVPNSR Trigger: TCTTGAGTTTGGAACTGACAAGTTGTGTGACCCTGA...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAGATAGGTTAACTGACTaGCTCAGGGTCACACAACTT | + |
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Preference number: 3 (lower is better) Translates to: QKERKPQIMRHLLNEHNIDRLTD*LRVTQL Trigger: AAGTTGTGTGACCCTGAGCAAGTCAGTTAACCTATC...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 72 bp | AAGTGCTACAATAACTGTCATCCACAGACATCCACATaGAAACACTACTGGACTAGTACACTAGAGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: KCYNNCHPQTST*KHYWTSTLEQI Trigger: TATTTGCTCTAGTGTACTAGTCCAGTAGTGTTTGCATGTGGATGTCTGTGGATGACAGTTATTGTAGCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAGAGGCAATTGGAAGTTaGAACCCTCACTGGATATTT | + |
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Preference number: 3 (lower is better) Translates to: QKERKPQIMRHLLNEHNIEAIGS*NPHWIF Trigger: AAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTC...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CAA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAATGTAACACAGACATaGCCAAAACTACTTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: KILVHCQSATITVIHRHPNVTQT*PKLLHR Trigger: CCTGTGAAGTAGTTTTGGCAATGTCTGTGTTACATT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 72 bp | CAGAATTTAAATCTCCAAACTTGTAGTCCAGGGCTGTaGTCTTTTTGCAAACCAAAAAGAAATGACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: QNLNLQTCSPGL*SFCKPKRNDCT Trigger: AGTGCAGTCATTTCTTTTTGGTTTGCAAAAAGAGCACAGCCCTGGACTACAAGTTTGGAGATTTAAATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR-3UTR CAA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAAGATGTTCCCCAAATaGCAAAATGCTACACTAATG | + |
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Preference number: 3 (lower is better) Translates to: KILVHCQSATITVIHRHPKMFPK*QNATLM Trigger: CATTAGTGTAGCATTTTGCAATTTGGGGAACATCTT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR GCA 72 bp | AAAGAAACATTTCATAGTGGCAAAATTTTAGTGCACTaGCAAAGTGCTACAATAACTGTCATCCACAGACAT | + |
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Preference number: 3 (lower is better) Translates to: KETFHSGKILVH*QSATITVIHRH Trigger: ATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTTGCCACTATGAAATGTTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAGATCGGGGCCGGAGTaGGAACCGCGGACAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPRSGPE*EPRTGS Trigger: GCTGCCTGTCCGCGGTTCCCACTCCGGCCCCGATCT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTCCGCCGCCGCTAGGTTaGTCGGTCCTCGGCGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SIYEAIGSLNPHWIFTDIPPPLG*SVLGAN Trigger: GTTGGCGCCGAGGACCGATCAACCTAGCGGCGGCGG...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAACCTTGACACAGGAATaGATCATGAAGGCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPTLTQE*IMKAGW Trigger: CCATCCAGCCTTCATGATTCATTCCTGTGTCAAGGT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGTGGGTGTGGCTGTGTaGGTATTTCAAAACACACAC | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPVGVAV*VFQNTH Trigger: GTGTGTGTTTTGAAATACGCACACAGCCACACCCAC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAATGAATCATGAAGGCTaGATGGGTAGACTGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIMNHEG*MGRLGG Trigger: CCCTCCCAGTCTACCCATCCAGCCTTCATGATTCAT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCACATGAGGAGAATGTCTaGGGGATAATGGCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPHEENV*GIMAGK Trigger: TTTTCCTGCCATTATCCCTCAGACATTCTCCTCATG...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGAAGAAAATGTGCCATaGGGAGAATGTCTGAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPEENVP*GECLRD Trigger: ATCCCTCAGACATTCTCCTCATGGCACATTTTCTTC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGTTCATCTCAATCCTTaGCATACTCATCTGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPVHLNP*HTHLPD Trigger: GTCTGGCAGATGAGTATGTCAAGGATTGAGATGAAC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCACCACAGACATCCACATaGAAACACTACTGGACTAGT | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPPQTST*KHYWTS Trigger: ACTAGTCCAGTAGTGTTTGCATGTGGATGTCTGTGG...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAACAGAGCAAAGATGGTaGCAAACTGATCGAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNITEQRW*QTDRME Trigger: CTCCATTCGATCAGTTTGTCACCATCTTTGCTCTGT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAGTCACAGAGAAGCCTaGCTTTCAAAACAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPSHREA*LSKQSK Trigger: TTTGCTCTGTTTTGAAAGTCAGGCTTCTCTGTGACT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTAGAGATACGCTCTTATaGATGTGGGCAATGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SIYEAIGSLNPHWIFTDIRDTLL*MWAMSP Trigger: TGGGGACATTGCCCACATGCATAAGAGCGTATCTCT...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATACGCATGCCACATCACTaGAAAACGTCCTCATATTTT | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIRMPHH*KTSSYF Trigger: AAAATATGAGGACGTTTTTCAGTGATGTGGCATGCG...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAAGTGCACTGCCAAAGTaGTACAATAACTGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNISALPK*YNNCHP Trigger: TGGATGACAGTTATTGTAGCACTTTGGCAGTGCACT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTCCACATGATGAGGAATaGATAGAGTTGGTTCATACC | + |
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Preference number: 4 (lower is better) Translates to: SIYEAIGSLNPHWIFTDIPHDEE*IELVHT Trigger: GGTATGAACCAACTCTATTCATTCCTCATCATGTGG...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGTAACTCTACAAAGATaGCTCATCATATCAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPVTLQR*LIISEA Trigger: TGCTTCTGATATGATGAGTCATCTTTGTAGAGTTAC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTACGAGACACAAATTGTaGAGATGTTCCCCAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: SIYEAIGSLNPHWIFTDITRHKL*RCSPNC Trigger: GCAATTTGGGGAACATCTTCACAATTTGTGTCTCGT...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCACCCCAAATTGCAAAATaGTACACTAATGTAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPPQIAK*YTNVRQ Trigger: CTGTCTTACATTAGTGTAGCATTTTGCAATTTGGGG...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATATTCATGTCAAAGTCCTaGCTGGCAATTTCCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIFMSKS*LAISTK Trigger: TTTTGTGGAAATTGCCAGCCAGGACTTTGACATGAA...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTGACAAACTGATCGAATaGAGAGATACGCTCTTATGC | + |
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Preference number: 4 (lower is better) Translates to: SIYEAIGSLNPHWIFTDIDKLIE*RDTLLC Trigger: GCATAAGAGCGTATCTCTCCATTCGATCAGTTTGTC...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAAAGAGGGAAAACTGTTaGTTGGGTAGACAATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIKRENC*LGRQSN Trigger: ATTTGATTGTCTACCCAATCAACAGTTTTCCCTCTT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAAGAAACCAATTCAAATaGAAAACAGCGACTAACCTT | + |
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Preference number: 4 (lower is better) Translates to: KILVHCQSATITVIHRHPRNQFK*KTATNL Trigger: AAGGTTAGTCGCTGTTTTCCATTTGAATTGGTTTCT...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAGGGAAAACTGTTGATTaGGTAGACAATCAAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIGKTVD*VDNQIP Trigger: TGGAATTTGATTGTCTACCCAATCAACAGTTTTCCC...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR GCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATACCTATGAAACATTCATaGCAAAAGCCATGTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNIPMKHS*QKPCFN Trigger: ATTGAAACATGGCTTTTGGCATGAATGTTTCATAGG...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAAGTTGGAATGGGAGTTaGCTAAATTACATGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: QKERKPQIMRHLLNEHNISWNGS*LNYMKC Trigger: ACATTTCATGTAATTTAGCCAACTCCCATTCCAACT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| 3UTR CAA 72 bp | AACATTACCATAGGGATGCAATTAGCAAAACTTAAATaGTGGCAAATGCTACATGTGAAACAACCTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: NITIGMQLAKLK*WQMLHVKQPHF Trigger: GAAATGAGGTTGTTTCACATGTAGCATTTGCCACAATTTAAGTTTTGCTAATTGCATCCCTATGGTAATGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CAA 90 bp | AAAATTTTAGTGCACTGCCAAAGTGCTACAATAACTGTCATCCACAGACATCCAGCCGCCGCCGCTAGGTaGATCGGTCCTCGGCGCCAA | + |
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Preference number: 5 (lower is better) Translates to: KILVHCQSATITVIHRHPAAAAR*IGPRRQ Trigger: TTGGCGCCGAGGACCGATCAACCTAGCGGCGGCGGC...TGGATGTCTGTGGATGACAGTTATTGTAGCACTTTGGCAGTGCACTAAAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CAA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATATCAGGGTCACACAACTaGTCAGTTCCAAACTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: QKERKPQIMRHLLNEHNISGSHN*SVPNSR Trigger: TCTTGAGTTTGGAACTGACAAGTTGTGTGACCCTGA...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CAA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTGAGGCAATTGGAAGTTaGAACCCTCACTGGATATTT | + |
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Preference number: 5 (lower is better) Translates to: SIYEAIGSLNPHWIFTDIEAIGS*NPHWIF Trigger: AAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTC...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CAA 90 bp | CAAAAAGAGAGAAAACCACAGATTATGCGCCACCTACTAAATGAACACAACATAAATGTAACACAGACATaGCCAAAACTACTTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: QKERKPQIMRHLLNEHNINVTQT*PKLLHR Trigger: CCTGTGAAGTAGTTTTGGCAATGTCTGTGTTACATT...TATGTTGTGTTCATTTAGTAGGTGGCGCATAATCTGTGGTTTTCTCTCTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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| CDS-3UTR CAA 90 bp | AGCATTTATGAGGCAATTGGAAGTTTGAACCCTCACTGGATATTTACTGATATTTGTTCATCTCAATCCTaGACATACTCATCTGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SIYEAIGSLNPHWIFTDICSSQS*TYSSAR Trigger: TCTGGCAGATGAGTATGTCAAGGATTGAGATGAACA...AATATCAGTAAATATCCAGTGAGGGTTCAAACTTCCAATTGCCTCATAAATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374888.3 |
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