Pregenerated sensors for ZXDA (Homo sapiens)
Ensembl gene IDs: ENSG00000198205Ensembl transcript IDs: ENST00000358697.6
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AACTCAAGAGTCGAATGGGAGAGTGGGAAATATTTCCTCTTTGTTTaGAGCTACACACACACACACACACACACACACACACACATTACT | + |
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Preference number: 2 (lower is better) Translates to: NSRVEWESGKYFLFV*SYTHTHTHTHTHIT Trigger: AGTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTCAAAACAAAGAGGAAATATTTCCCACTCTCCCATTCGACTCTTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCCATAGTCCAGGGCTGTaGTCTTTTTGCAAACCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFHSPGL*SFCKPK Trigger: TTTTGGTTTGCAAAAAGAGCACAGCCCTGGACTATG...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCAAGATACTATCAAATTaGTCTAATGGACATGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSKILSN*SNGHVA Trigger: GGCCACATGTCCATTAGACCAATTTGATAGTATCTT...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCACTGAAAAGACCTTATaGGCAATGTGTTCAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFTEKTL*AMCSNH Trigger: GTGGTTTGAACACATTGCTCATAAGGTCTTTTCAGT...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR CCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAGGTCTAATGGACATGTaGCCAATGCCACAAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KIDGIYSKCRQNPLISTLGLMDM*PMPQKN Trigger: GTTCTTTTGTGGCATTGGCCACATGTCCATTAGACC...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR TCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAGGCTCAAACCGCTTCTaGTTACAAGTACAAACAATA | + |
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Preference number: 2 (lower is better) Translates to: KIDGIYSKCRQNPLISTLGSNRF*LQVQTI Trigger: TATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCC...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR CCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAATGTCCAGATTGTCTTaGAAGAATAGGCTGAATACT | + |
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Preference number: 2 (lower is better) Translates to: KIDGIYSKCRQNPLISTLMSRLS*KNRLNT Trigger: AGTATTCAGCCTATTCTTCCAAGACAATCTGGACAT...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTAAGCCAGCAATGAGCTCTCTAGGGCACAGAGGGGAGAAAAATCTCCCTTTGCATGAGCTGGCTTaGAATGCAGACCGAAGATAC | + |
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Preference number: 3 (lower is better) Translates to: KSKPAMSSLGHRGEKNLPLHELA*NADRRY Trigger: GTATCTTCGGTCTGCATTCAAAGCCAGCTCATGCAA...AGGGAGATTTTTCTCCCCTCTGTGCCCTAGAGAGCTCATTGCTGGCTTACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR CCA 72 bp | GCTGGCTTTGAATGCAGACCGAAGATACTATCAAATTaGTCTAATGGACATGTGGCCAATGCCACAAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGFECRPKILSN*SNGHVANATKE Trigger: TTCTTTTGTGGCATTGGCCACATGTCCATTAGACCAATTTGATAGTATCTTCGGTCTGCATTCAAAGCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR CCA 72 bp | AGAAAAATCTCCCTCTGGTCTATGTCCAGATTGTCTTaGAAGAATAGGCTGAATACTCATTGCATGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RKISLWSMSRLS*KNRLNTHCMSW Trigger: CCAGCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCAGAGGGAGATTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR TCA 72 bp | GATATCTATATAGTTATGTATCTTAATGGATGCCTATaGCCCTTGCGTTCACCTCAGGCCTCTGCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: DIYIVMYLNGCL*PLRSPQASAFS Trigger: AGAAAATGCAGAGGCCTGAGGTGAACGCAAGGGTCATAGGCATCCATTAAGATACATAACTATATAGATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR GCA 72 bp | AATATGTTTACAGTCACACTTCTGTCTGTAATTACATaGCATGTCAACTATCATGGTGGGACAACAGTATTG | + |
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Preference number: 3 (lower is better) Translates to: NMFTVTLLSVIT*HVNYHGGTTVL Trigger: CAATACTGTTGTCCCACCATGATAGTTGACATGGCATGTAATTACAGACAGAAGTGTGACTGTAAACATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR CCA 72 bp | AAAATAGTCATGAAACTCAAGAGTCGAATGGGAGAGTaGGAAATATTTCCTCTTTGTTTTGAGCTACACACA | + |
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Preference number: 3 (lower is better) Translates to: KIVMKLKSRMGE*EIFPLCFELHT Trigger: TGTGTGTAGCTCAAAACAAAGAGGAAATATTTCCCACTCTCCCATTCGACTCTTGAGTTTCATGACTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| 3UTR GCA 72 bp | CTATACTCACATAAGATAGATGGTATCTACTCAAAATaGAGACAAAACCCTCTCATTTCAACTCTAAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: LYSHKIDGIYSK*RQNPLISTLRV Trigger: TACTCTTAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTTATGTGAGTATAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTACCGCCGCCGCTAGGTTaGTGGGGCCTCGGCGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: KIDGIYSKCRQNPLISTLPPPLG*WGLGAN Trigger: GTTCGCGCCGAGGCCCCATCAACCTAGCGGCGGCGG...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AAGAGTAAGCCAGCAATGAGCTCTCTAGGGCACAGAGGGGAGAAAAATCTCCCTCCACATGGCAAGGAATaGATAGAGTTGCTTCATACC | + |
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Preference number: 4 (lower is better) Translates to: KSKPAMSSLGHRGEKNLPPHGKE*IELLHT Trigger: GGTATGAAGCAACTCTATTCATTCCTTGCCATGTGG...AGGGAGATTTTTCTCCCCTCTGTGCCCTAGAGAGCTCATTGCTGGCTTACTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAAGATCGGGGCCGGAGTaGGAACCGCGGACAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KIDGIYSKCRQNPLISTLRSGPE*EPRTGS Trigger: ACTGCCTGTCCGCGGTTCCCACTCCGGCCCCGATCT...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | AACTCTAAGAGTAAGCCAGCAATGAGCTCTCTAGGGCACAGAGGGGAGAAAAATCATAGTCCAGGGCTGTaGTCTTTTTGCAAACCAAAA | + |
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Preference number: 4 (lower is better) Translates to: NSKSKPAMSSLGHRGEKNHSPGL*SFCKPK Trigger: TTTTGGTTTGCAAAAAGAGCACAGCCCTGGACTATG...ATTTTTCTCCCCTCTGTGCCCTAGAGAGCTCATTGCTGGCTTACTCTTAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AACTCTAAGAGTAAGCCAGCAATGAGCTCTCTAGGGCACAGAGGGGAGAAAAATGGCTCAAACCGCTTCTaGTTACAAGTACAAACAATA | + |
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Preference number: 4 (lower is better) Translates to: NSKSKPAMSSLGHRGEKNGSNRF*LQVQTI Trigger: TATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCC...ATTTTTCTCCCCTCTGTGCCCTAGAGAGCTCATTGCTGGCTTACTCTTAGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCTGTCATATTGCTTGCTaGAGCCAGGGAAAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SATGLKPLLITSTNNNNCCHIAC*SQGKSR Trigger: CCTGCTCTTTCCCTGGCTGCAGCAAGCAATATGACA...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAGATGCCTATGACCCTTaGGTTCACCTCAGGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KIDGIYSKCRQNPLISTLDAYDP*VHLRPL Trigger: CAGAGGCCTGAGGTGAACGCAAGGGTCATAGGCATC...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCGGTCTAATGGACATGTaGCCAATGCCACAAAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSGLMDM*PMPQKN Trigger: GTTCTTTTGTGGCATTGGCCACATGTCCATTAGACC...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCTGCATGAGCTGGCTTTaGATGCAGACCGAAGATACT | + |
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Preference number: 4 (lower is better) Translates to: SATGLKPLLITSTNNNNCCMSWL*MQTEDT Trigger: AGTATCTTCGGTCTGCATTCAAAGCCAGCTCATGCA...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | TCTAATTTAAATGTAAGTAAAAGAGATTCATGGCAAGGACTGGTGTACACCTACCTTAATGGATGCCTATaGCCCTTGCGTTCACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SNLNVSKRDSWQGLVYTYLNGCL*PLRSPQ Trigger: CTGAGGTGAACGCAAGGGTCATAGGCATCCATTAAG...GTAGGTGTACACCAGTCCTTGCCATGAATCTCTTTTACTTACATTTAAATTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCACAAAAGAAACCATGTaGGCCCACGGACAATCACAA | + |
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Preference number: 4 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFTKETM*AHGQSQ Trigger: TTGTGATTGTCCGTGGGCTCACATGGTTTCTTTTGT...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCGGGCTGTGCTCTTTTTaGAAACCAAAAAGAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSGLCSF*KPKRND Trigger: GTCATTTCTTTTTGGTTTGCAAAAAGAGCACAGCCC...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCAGTCGAATGGGAGAGTaGGAAATATTTCCTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSSRMGE*EIFPLC Trigger: ACAAAGAGGAAATATTTCCCACTCTCCCATTCGACT...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCCCATGTCAACTATCATaGTGGGACAACAGTATTGAA | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSPCQLS*WDNSIE Trigger: TTCAATACTGTTGTCCCACCATGATAGTTGACATGG...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCCATAAGAAGAATGGCTaGGAGATGGTGACCATGAAA | + |
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Preference number: 4 (lower is better) Translates to: SATGLKPLLITSTNNNNCHKKNG*EMVTMK Trigger: TTTCATGGTCACCATCTCTCAGCCATTCTTCTTATG...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCGCAACTAATAGTGTTTaGTACCAGGACCACACTGTA | + |
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Preference number: 4 (lower is better) Translates to: SATGLKPLLITSTNNNNCATNSV*YQDHTV Trigger: TACAGTGTGGTCCTGGTAGCAAACACTATTAGTTGC...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCTTCACCTCAGGCCTCTaGATTTTCTATAGGAAAATA | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSFTSGL*IFYRKI Trigger: TATTTTCCTATAGAAAATGCAGAGGCCTGAGGTGAA...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTATGTCCAGATTGTCTTGGAAGAATAGGCTGAATACTCATTGCATGAGCAGAAATCAATTAAGGTaGGAGGCAGCAAACAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: WSMSRLSWKNRLNTHCMSRNQLR*EAANSY Trigger: ATAACTGTTTGCTGCCTCCCACCTTAATTGATTTCT...GCTCATGCAATGAGTATTCAGCCTATTCTTCCAAGACAATCTGGACATAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCATTCATGGCAAGGACTaGTGTACACCTACAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFIHGKD*CTPTRK Trigger: TTTCCTTGTAGGTGTACACCAGTCCTTGCCATGAAT...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCGGTATCTACTCAAAATaGAGACAAAACCCTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFGIYSK*RQNPLI Trigger: AATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACC...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCAAGATACTATCAAATTaGTCTAATGGACATGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFKILSN*SNGHVA Trigger: GGCCACATGTCCATTAGACCAATTTGATAGTATCTT...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCATGTCCAGATTGTCTTaGAAGAATAGGCTGAATACT | + |
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Preference number: 4 (lower is better) Translates to: SATGLKPLLITSTNNNNCMSRLS*KNRLNT Trigger: AGTATTCAGCCTATTCTTCCAAGACAATCTGGACAT...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CCA 90 bp | TCTAATTTAAATGTAAGTAAAAGAGATTCATGGCAAGGACTGGTGTACACCTACAGTAAAAGAGATTCATaGCAAGGACTGGTGTACACC | + |
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Preference number: 4 (lower is better) Translates to: SNLNVSKRDSWQGLVYTYSKRDS*QGLVYT Trigger: GGTGTACACCAGTCCTTGCCATGAATCTCTTTTACT...GTAGGTGTACACCAGTCCTTGCCATGAATCTCTTTTACTTACATTTAAATTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR TCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAACTGAAAAGACCTTATaGGCAATGTGTTCAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: KIDGIYSKCRQNPLISTLTEKTL*AMCSNH Trigger: GTGGTTTGAACACATTGCTCATAAGGTCTTTTCAGT...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCAAACATTTCACTCTGGGTCTGAGTGATAACAAAAGCCCTTGTATTTTCAGTGCACTGTTAAAGTaGCATAATAATTGTTATCCC | + |
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Preference number: 4 (lower is better) Translates to: QSKHFTLGLSDNKSPCIFSALLK*HNNCYP Trigger: GGGATAACAATTATTATGGCACTTTAACAGTGCACT...GAAAATACAAGGGCTTTTGTTATCACTCAGACCCAGAGTGAAATGTTTGCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR GCA 90 bp | AAGATAGATGGTATCTACTCAAAATGCAGACAAAACCCTCTCATTTCAACTCTAATGTACACACATACTTaGAGTAATACTGTGACTGAA | + |
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Preference number: 4 (lower is better) Translates to: KIDGIYSKCRQNPLISTLMYTHT*SNTVTE Trigger: TTCAGTCACAGTATTACTGCAAGTATGTGTGTACAT...TAGAGTTGAAATGAGAGGGTTTTGTCTGCATTTTGAGTAGATACCATCTATCTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CAA 90 bp | AACTCTAAGAGTAAGCCAGCAATGAGCTCTCTAGGGCACAGAGGGGAGAAAAATTTGCATGAGCTGGCTTaGAATGCAGACCGAAGATAC | + |
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Preference number: 5 (lower is better) Translates to: NSKSKPAMSSLGHRGEKNLHELA*NADRRY Trigger: GTATCTTCGGTCTGCATTCAAAGCCAGCTCATGCAA...ATTTTTCTCCCCTCTGTGCCCTAGAGAGCTCATTGCTGGCTTACTCTTAGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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| CDS-3UTR CAA 90 bp | AGTGCTACAGGGCTCAAACCGCTTCTGATTACAAGTACAAACAATAATAATTGCTATTTCCTCTTTGTTTaGAGCTACACACACACACAC | + |
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Preference number: 5 (lower is better) Translates to: SATGLKPLLITSTNNNNCYFLFV*SYTHTH Trigger: GTGTGTGTGTGTGTAGCTCAAAACAAAGAGGAAATA...GCAATTATTATTGTTTGTACTTGTAATCAGAAGCGGTTTGAGCCCTGTAGCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358697.6 |
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