RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZWINT (Homo sapiens)

Ensembl gene IDs: ENSG00000122952

Ensembl transcript IDs: ENST00000318387.6, ENST00000361148.6, ENST00000373944.8, ENST00000395405.5, ENST00000460654.5, ENST00000467523.1, ENST00000489649.6, ENST00000494312.5

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCATGGTGTCTCCTGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGATTCTCTGCCTCAGCCTCAGCCTCA +
Preference number: 1 (lower is better)
Translates to: PMVSPVLCSWGRVGC*GLSSGRFSASASAS
Trigger: TGAGGCTGAGGCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGAGACACCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR TCA 90 bp AAGGCTTCCCGGAGTTGTGTCCGTTTCCTCTGGGCTTCCTCCATCTaGGTCAGGGCCTTGGTGAGGCCAATTTTGATGGCCTCTACGTGC +
Preference number: 1 (lower is better)
Translates to: KASRSCVRFLWASSI*VRALVRPILMASTC
Trigger: GCACGTAGAGGCCATCAAAATTGGCCTCACCAAGGCCCTGACTCAGATGGAGGAAGCCCAGAGGAAACGGACACAACTCCGGGAAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR CCA 90 bp GACACACCAGGGTCTCTCCCCATGGTGTCTCCTGTACTCTGCTCCTaGGGTCGAGTCGGCTGCTGGGGTTTATCATCTGGAAGATTCTCT +
Preference number: 1 (lower is better)
Translates to: DTPGSLPMVSPVLCS*GRVGCWGLSSGRFS
Trigger: AGAGAATCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGAGACACCATGGGGAGAGACCCTGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR TCA 90 bp CCTTCCACACTTGCAGTCCAGGGACACCAAGGCCTGAGTTGGGTCTaGCCTTTTCTAGGATCTTTCTCCATGCTGCTGTCCTCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: PSTLAVQGHQGLSWV*PFLGSFSMLLSSRK
Trigger: CTTCCTGGAGGACAGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCTGGACTGCAAGTGTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR GCA 90 bp TCAGATGCAGAGAGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGGCCTGAGTTGGGTCTGACCTTTTCT +
Preference number: 1 (lower is better)
Translates to: SDAERGKPGFPSFHT*SPGTPRPELGLTFS
Trigger: AGAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCTCTCTGCATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR GCA 90 bp GCAGATGCTTCTCCTGTTGTAGCTGCCACTGGTTCTGGACTGCTCTaGGTTTCTCCATGGCCATTTGTTTCTTGGCCTGGAGCTGCTCAA +
Preference number: 1 (lower is better)
Translates to: ADASPVVAATGSGLL*VSPWPFVSWPGAAQ
Trigger: TTGAGCAGCTCCAGGCCAAGAAACAAATGGCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAAGCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR TCA 90 bp ATCCACAGATGCCAGAGCTTGCTGGGATGTAGTCAGAAATCAAGCTaGACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGG +
Preference number: 1 (lower is better)
Translates to: IHRCQSLLGCSQKSS*TQEFTVFPVMMVGR
Trigger: CCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAGCTTGATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR GCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCCCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGG +
Preference number: 2 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPPSFHT*SPGTPR
Trigger: CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGG...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGCCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGG +
Preference number: 2 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLPSFHT*SPGTPR
Trigger: CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGG...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR TCA 90 bp TCCTGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTGGGGTTTATCATCTGGAAGTGGGCTTCCTCCATCTaGGTCAGGGCCTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SCTLLLGSSRLLGFIIWKWASSI*VRALVR
Trigger: CCTCACCAAGGCCCTGACTCAGATGGAGGAAGCCCA...CTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR TCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAAGGGACACCAAGGCCTaGGTTGGGTCTGACCTTTTC +
Preference number: 2 (lower is better)
Translates to: SPCLHHRRPKASTPSPSARDTKA*VGSDLF
Trigger: GAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCT...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAATACCCCCTCCCCATCTaGACACCCTGTGTTCAAACC +
Preference number: 2 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKYPLPI*TPCVQT
Trigger: GGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTA...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR CCA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 2 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR TCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAAGCTTGTCTTTCTTCTaGGAGTCCTGCTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SPCLHHRRPKASTPSPSASLSFF*ESCSEG
Trigger: TCCCTCTGAGCAGGACTCTCAGAAGAAAGACAAGCT...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR GCA 90 bp TCCTGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTGGGGTTTATCATCTGGAAGACCTCCGCCAGATGCTaGAGATGCTTCTCCTGTTGT +
Preference number: 2 (lower is better)
Translates to: SCTLLLGSSRLLGFIIWKTSARC*RCFSCC
Trigger: ACAACAGGAGAAGCATCTGCAGCATCTGGCGGAGGT...CTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR CCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGTCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 2 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR CAA 90 bp TTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCTGCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: FPSFHTCSPGTPRPE*GLTFSRIFLHAAVL
Trigger: GAGGACAGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR CAA 90 bp GATGGCCTCTACGTGCTCCCTGTAGGTGGCCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGCCTTCTGTCGGCTCGTGTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: DGLYVLPVGGLQLFP*FLSCNCLLSARVFR
Trigger: TCTGAAGACACGAGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAGGCCACCTACAGGGAGCACGTAGAGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR TCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAAAGGAAATCCGCTACCTaGAGCTGGCTGCAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LNSGVHSLSCNDGWEVRERKSAT*SWLQSS
Trigger: GCTGCTCTGCAGCCAGCTTCAGGTAGCGGATTTCCT...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR GCA 90 bp GCCTTCAGCTCTTTCCATTGTTCCTTAGCTGCAATTGCCTTCTGTCGGCTCGTGCTTAAGTCTGCTCTCTaGCAGTGCTGCCCTGTATCT +
Preference number: 2 (lower is better)
Translates to: AFSSFHCSLAAIAFCRLVLKSAL*QCCPVS
Trigger: AGATACAGGGCAGCACTGGCAGAGAGCAGACTTAAG...CACGAGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR GCA 90 bp TTGTTTCTTGGCCTGGAGCTGCTCAAAGGCTTCCCGGAGTTGTGTCCGTTTCCTATTTTAATCCACAGATaGCAGAGCTTGCTGGGATGT +
Preference number: 2 (lower is better)
Translates to: LFLGLELLKGFPELCPFPILIHR*QSLLGC
Trigger: ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAAT...AGGAAACGGACACAACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR TCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTAGGGACACCAAGGCCTaGGTTGGGTCTGACCTTTTC +
Preference number: 2 (lower is better)
Translates to: QSQLLSCYWLLSICINSCRDTKA*VGSDLF
Trigger: GAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCT...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR TCA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCGAACAAATACACAACTaGGAGAGATCCAGGGATTTT +
Preference number: 2 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSEQIHN*ERSRDF
Trigger: AAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTC...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR CCA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCCATCCATCTGCTCCATaGGTAGCAGAGCTCAGATGC +
Preference number: 2 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLHPSAP*VAELRC
Trigger: GCATCTGAGCTCTGCTACCCATGGAGCAGATGGATG...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR CCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGGGAAGTCAGAGGCCTaGGGAAGAAGACAGGGGTTA +
Preference number: 2 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEGKSEA*GRRQGL
Trigger: TAACCCCTGTCTTCTTCCCCAGGCCTCTGACTTCCC...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTCCACATATAACCACCTaGCTAAAACATTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TERDPGILIHRCQSLLGCPHITT*LKHSPP
Trigger: AGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGG...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR TCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGGCCTGAGTTGGGTCTaGCCTTTTCTAGGATCTTTC +
Preference number: 2 (lower is better)
Translates to: QSQLLSCYWLLSICINSCGLSWV*PFLGSF
Trigger: GAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACTTCCCACCATCCATCTaGTCCATGGGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: WLLSICINSCSCQHMKMNFPPSI*SMGSRA
Trigger: AGCTCTGCTACCCATGGAGCAGATGGATGGTGGGAA...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAACAACAGCTTACCCTCTaGAGAAACCTCCGCCAGATG +
Preference number: 2 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKQQLTL*RNLRQM
Trigger: CATCTGGCGGAGGTTTCTGCAGAGGGTAAGCTGTTG...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR TCA 90 bp AAAGGTACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCAGGCCTGAGTTGGGTCTaGCCTTTTCTAGGATCTTTC +
Preference number: 2 (lower is better)
Translates to: KGTSSPIRKQKVGKIKVSGLSWV*PFLGSF
Trigger: GAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCC...TGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGTACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR GCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAAACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKTDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR CCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 2 (lower is better)
Translates to: MKMNKYTTERDPGILIHRSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR GCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPTDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR GCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAACCACATATAACCACCTaGCTAAAACATTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKPHITT*LKHSPP
Trigger: AGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGG...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR TCA 90 bp AAAGGTACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 2 (lower is better)
Translates to: KGTSSPIRKQKVGKIKVSHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...TGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGTACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR TCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAACATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 2 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR TCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGCCTAAAACAGTCAGATaGGCTCACTGTTATAATTCT +
Preference number: 2 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEPKTVR*AHCYNS
Trigger: AGAATTATAACAGTGAGCTCATCTGACTGTTTTAGG...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR CAA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCTCCCTCCTTCCACACTaGCAGTCCAGGGACACCAAG +
Preference number: 3 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFSLLPH*QSRDTK
Trigger: CTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGA...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR TCA 72 bp CGGAGTTGTGTCCGTTTCCTCTGGGCTTCCTCCATCTaGGTCAGGGCCTTGGTGAGGCCAATTTTGATGGCC +
Preference number: 3 (lower is better)
Translates to: RSCVRFLWASSI*VRALVRPILMA
Trigger: GGCCATCAAAATTGGCCTCACCAAGGCCCTGACTCAGATGGAGGAAGCCCAGAGGAAACGGACACAACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR GCA 72 bp GAGAGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGGCCTGAGTTGGGTCTG +
Preference number: 3 (lower is better)
Translates to: ERGKPGFPSFHT*SPGTPRPELGL
Trigger: CAGACCCAACTCAGGCCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR CCA 72 bp TCTCCTGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGATTCTCTGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: SPVLCSWGRVGC*GLSSGRFSASA
Trigger: GGCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR GCA 72 bp GTGTCTCCTGTACTCTGCTCCTGGGGTCGAGTCGGCTaGTGGGGTTTATCATCTGGAAGATTCTCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: VSPVLCSWGRVG*WGLSSGRFSAS
Trigger: TGAGGCAGAGAATCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGGAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR GCA 72 bp TCTCCTGTTGTAGCTGCCACTGGTTCTGGACTGCTCTaGGTTTCTCCATGGCCATTTGTTTCTTGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SPVVAATGSGLL*VSPWPFVSWPG
Trigger: TCCAGGCCAAGAAACAAATGGCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR CCA 72 bp TGCAGATGCTTCTCCTGTTGTAGCTGCCACTGGTTCTaGACTGCTCTGCGTTTCTCCATGGCCATTTGTTTC +
Preference number: 3 (lower is better)
Translates to: CRCFSCCSCHWF*TALRFSMAICF
Trigger: GAAACAAATGGCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAAGCATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR CAA 90 bp TACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGG +
Preference number: 3 (lower is better)
Translates to: YTTERDPGILIHRCQSLLTPRPE*GLTFSR
Trigger: CCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT...CAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR CAA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTATGGCCATTTGTTTCTaGGCCTGGAGCTGCTCAAAG +
Preference number: 3 (lower is better)
Translates to: TERDPGILIHRCQSLLGCMAICF*AWSCSK
Trigger: CTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCAT...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR-3UTR CAA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTTTTCTCCATGGCCATTaGTTTCTTGGCCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: TERDPGILIHRCQSLLGCFLHGH*FLGLEL
Trigger: CAGCTCCAGGCCAAGAAACAAATGGCCATGGAGAAA...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
3UTR TCA 72 bp TGCCAGAGCTTGCTGGGATGTAGTCAGAAATCAAGCTaGACTCAGGAGTTCACAGTCTTTCCTGTAATGATG +
Preference number: 3 (lower is better)
Translates to: CQSLLGCSQKSS*TQEFTVFPVMM
Trigger: CATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAGCTTGATTTCTGACTACATCCCAGCAAGCTCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR-3UTR CAA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAAACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGG +
Preference number: 3 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKTPRPE*GLTFSR
Trigger: CCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
3UTR-3UTR CAA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAAGCTCCTGTCATGTTATaGGCTTCTGAGTATCTGTAT +
Preference number: 3 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKAPVML*ASEYLY
Trigger: ATACAGATACTCAGAAGCCAATAACATGACAGGAGC...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCACGCTCCCTCACCTCTaGAGAAACCTCCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPTLPHL*RNLRQM
Trigger: CATCTGGCGGAGGTTTCTGCAGAGGTGAGGGAGCGT...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR TCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCCTGTCAAGCTCCTGCTaGGTCCCTGTCTTACGCTCC +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFLSSSC*VPVLRS
Trigger: GGAGCGTAAGACAGGGACTCAGCAGGAGCTTGACAG...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR TCA 90 bp GCCTTCTGTCGGCTCGTGTCTTCAGAAGCCAAGGGGTCGAGACCCTTAGCAGTGTGGGCTTCCTCCATCTaGGTCAGGGCCTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AFCRLVSSEAKGSRPLAVWASSI*VRALVR
Trigger: CCTCACCAAGGCCCTGACTCAGATGGAGGAAGCCCA...CACTGCTAAGGGTCTCGACCCCTTGGCTTCTGAAGACACGAGCCGACAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR TCA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGCCAGACCCTGGCTTCTaGAAGGCTCGCTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLPDPGF*KARSHL
Trigger: AAGATGAGAGCGAGCCTTTCAGAAGCCAGGGTCTGG...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAGTGTCTCCTGTACTCTaGTCCTGGGGTCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKVSPVL*SWGRVG
Trigger: GCCGACTCGACCCCAGGAGCAGAGTACAGGAGACAC...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGGGGAAGTCAGAGGCCTaGGGAAGAAGACAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLGKSEA*GRRQGL
Trigger: TAACCCCTGTCTTCTTCCCCAGGCCTCTGACTTCCC...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CCA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGAACCAGGATCTTGGCTaGCAGTTCTGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLNQDLG*QFCLLL
Trigger: CAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTT...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACTGTCAAGCTCCTGCTaGGTCCCTGTCTTACGCTCC +
Preference number: 4 (lower is better)
Translates to: SPCLHHRRPKASTPSPSALSSSC*VPVLRS
Trigger: GGAGCGTAAGACAGGGACTCAGCAGGAGCTTGACAG...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR TCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAAGGAAATCCGCTACCTaGAGCTGGCTGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKRKSAT*SWLQSS
Trigger: GCTGCTCTGCAGCCAGCTTCAGGTAGCGGATTTCCT...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCTTCTTGGCCTGGAGCTaGTCAAAGGCTTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFFLAWS*SKASRS
Trigger: ACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAA...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGCCACTGGTTCTGGACTaGTCTGCGTTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLPLVLD*SAFLHG
Trigger: GCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGG...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCTGGGGTCGAGTCGGCTaGTGGGGTTTATCATCTGGA +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFWGRVG*WGLSSG
Trigger: TCCAGATGATAAACCCCAGCAGCCGACTCGACCCCA...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp GCTCGTGTCTTCAGAAGCCAAGGGGTCGAGACCCTTAGCAGTGTCCTCCTGAGCGTAGACCAACAGCCTTaGAGGACACACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARVFRSQGVETLSSVLLSVDQQP*RTHQGL
Trigger: GAGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTAC...GCTCAGGAGGACACTGCTAAGGGTCTCGACCCCTTGGCTTCTGAAGACACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR TCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCGGCCTGAGTTGGGTCTaGCCTTTTCTAGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPGLSWV*PFLGSF
Trigger: GAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCC...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGGGTTCTGGACTGCTCTaGGTTTCTCCATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLGSGLL*VSPWPF
Trigger: AAATGGCCATGGAGAAACGCAGAGCAGTCCAGAACC...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCTTCTCCTGTTGTAGCTaGCACTGGTTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPFSCCS*HWFWTA
Trigger: AGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAA...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGACCTCCGCCAGATGCTaGAGATGCTTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLTSARC*RCFSCC
Trigger: ACAACAGGAGAAGCATCTGCAGCATCTGGCGGAGGT...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCCGCTCCTGTTCTGCCTaGTGCTTCAGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFRSCSA*CFRFPS
Trigger: ACTTGGAAACCTGAAGCAGCAGGCAGAACAGGAGCG...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCTTGGCTGGCAGTTCTaGCTCCTCCTGCAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRLGWQF*LLLQAY
Trigger: GTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAG...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395405.5
CDS-3UTR CCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAAGCTGCCACTGGTTCTaGACTGCTCTGCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKSCHWF*TALRFS
Trigger: GGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCT...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GCCAGTGCTGCCCTGTATCTCAGTAAGAGGAGCCAGGACCAGACCCTGGCTTCTAGCTGCCACTGGTTCTaGACTGCTCTGCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASAALYLSKRSQDQTLASSCHWF*TALRFS
Trigger: GGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCT...AGAAGCCAGGGTCTGGTCCTGGCTCCTCTTACTGAGATACAGGGCAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLGRVGC*GLSSGR
Trigger: TCTTCCAGATGATAAACCCCAGCAGCCGACTCGACC...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TTGTTTCTTGGCCTGGAGCTGCTCAAAGGCTTCCCGGAGTTGTGTCCGTTTCCTCCTGTACTCTGCTCCTaGGGTCGAGTCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLGLELLKGFPELCPFPPVLCS*GRVGCW
Trigger: CCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGG...AGGAAACGGACACAACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAGGGAAGTCAGAGGCCTaGGGAAGAAGACAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKGKSEA*GRRQGL
Trigger: TAACCCCTGTCTTCTTCCCCAGGCCTCTGACTTCCC...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR TCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAGCTTGTCTTTCTTCTaGGAGTCCTGCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFSLSFF*ESCSEG
Trigger: TCCCTCTGAGCAGGACTCTCAGAAGAAAGACAAGCT...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp CCTGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTGGGGTTTATCATCTGGAAGATTCTTGGCCTGGAGCTaGTCAAAGGCTTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PVLCSWGRVGCWGLSSGRFLAWS*SKASRS
Trigger: ACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAA...TCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAGCCAGATGCTGCAGATaGTTCTCCTGTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPCLHHRRPKASTPSPSAARCCR*FSCCSC
Trigger: GCAGCTACAACAGGAGAAGCATCTGCAGCATCTGGC...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp GCCTTCTGTCGGCTCGTGTCTTCAGAAGCCAAGGGGTCGAGACCCTTAGCAGTGGCCAGATGCTGCAGATaGTTCTCCTGTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: AFCRLVSSEAKGSRPLAVARCCR*FSCCSC
Trigger: GCAGCTACAACAGGAGAAGCATCTGCAGCATCTGGC...CACTGCTAAGGGTCTCGACCCCTTGGCTTCTGAAGACACGAGCCGACAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKGRVGC*GLSSGR
Trigger: TCTTCCAGATGATAAACCCCAGCAGCCGACTCGACC...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCTGTACTCTGCTCCTaGGGTCGAGTCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSPVLCS*GRVGCW
Trigger: CCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGG...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACATCCATCTGCTCCATaGGTAGCAGAGCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKHPSAP*VAELRC
Trigger: GCATCTGAGCTCTGCTACCCATGGAGCAGATGGATG...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAACTCAACCAGGATCTTaGCTGGCAGTTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPCLHHRRPKASTPSPSATQPGS*LAVLPP
Trigger: AGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGT...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGTAGACCAACAGCCTTaGAGGACACACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSVDQQP*RTHQGL
Trigger: GAGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTAC...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCTGGGCTTCCTCCATCTaGGTCAGGGCCTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSWASSI*VRALVR
Trigger: CCTCACCAAGGCCCTGACTCAGATGGAGGAAGCCCA...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTTTCTTGGCCTGGAGCTaGTCAAAGGCTTCCCGGAGT +
Preference number: 4 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSFLAWS*SKASRS
Trigger: ACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAA...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCCACTGGTTCTGGACTaGTCTGCGTTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRPLVLD*SAFLHG
Trigger: GCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGG...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTCCACTGGTTCTGGACTaGTCTGCGTTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSPLVLD*SAFLHG
Trigger: GCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGG...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGGATCTTTCTCCATGCTaGTGTCCTCCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLDLSPC*CPPGSH
Trigger: ATGACTTCCTGGAGGACAGCAGCATGGAGAAAGATC...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGCCATTGTTCCTTAGCTaGAATTGCCTTCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLPLFLS*NCLLSA
Trigger: AGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGG...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp GCCAGTGCTGCCCTGTATCTCAGTAAGAGGAGCCAGGACCAGACCCTGGCTTCTCTTAAGTCTGCTCTCTaGCAGTGCTGCCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: ASAALYLSKRSQDQTLASLKSAL*QCCPVS
Trigger: AGATACAGGGCAGCACTGGCAGAGAGCAGACTTAAG...AGAAGCCAGGGTCTGGTCCTGGCTCCTCTTACTGAGATACAGGGCAGCACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp CATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCCTGGGGTTTATCATCTaGAAGATTCTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HHRRPKASTPSPSAHPVFLGFII*KILCLS
Trigger: GCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAG...GAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CCTCCTGAGCCAGGATGTTCTGCAGGAAATCCGCTACCTGAAGCTGGCTGCAGAACTCAACCAGGATCTTaGCTGGCAGTTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPEPGCSAGNPLPEAGCRTQPGS*LAVLPP
Trigger: AGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGT...TCTGCAGCCAGCTTCAGGTAGCGGATTTCCTGCAGAACATCCTGGCTCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCGCTCCTGTTCTGCCTaGTGCTTCAGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRRSCSA*CFRFPS
Trigger: ACTTGGAAACCTGAAGCAGCAGGCAGAACAGGAGCG...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAAACAACAGCTTACCCTaGAGGGTATACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKNNSLP*RVYRSW
Trigger: CCAGCTTCTGTATACCCTGCAGGGTAAGCTGTTGTT...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR CCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAACCTGTACTCTGCTCCTaGGGTCGAGTCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVREPVLCS*GRVGCW
Trigger: CCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGG...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCAGGGACACCAAGGCCTaGGTTGGGTCTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSRDTKA*VGSDLF
Trigger: GAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCT...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp TTGTTTCTTGGCCTGGAGCTGCTCAAAGGCTTCCCGGAGTTGTGTCCGTTTCCTGAAACCTCCGCCAGATaGTGCAGATGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LFLGLELLKGFPELCPFPETSAR*CRCFSC
Trigger: ACAGGAGAAGCATCTGCAGCATCTGGCGGAGGTTTC...AGGAAACGGACACAACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp ACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGAGTGTCTCCTGTACTCTaGTCCTGGGGTCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: TTERDPGILIHRCQSLLGVSPVL*SWGRVG
Trigger: GCCGACTCGACCCCAGGAGCAGAGTACAGGAGACAC...TCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SPCLHHRRPKASTPSPSATDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCTCCGAAAACAGAAAGTaGGAAAGATCAAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPSENRK*ERSRYH
Trigger: GTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGA...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR CAA 72 bp TACGTGCTCCCTGTAGGTGGCCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGCCTTCTGTCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: YVLPVGGLQLFP*FLSCNCLLSAR
Trigger: ACGAGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAGGCCACCTACAGGGAGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR TCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAACTGTCAAGCTCCTGCTaGGTCCCTGTCTTACGCTCC +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVRELSSSC*VPVLRS
Trigger: GGAGCGTAAGACAGGGACTCAGCAGGAGCTTGACAG...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAACCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVREPSFHT*SPGTPR
Trigger: CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGG...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAATTTTAATCCACAGATaGCAGAGCTTGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKILIHR*QSLLGC
Trigger: ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAAT...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCTGGGGTTTATCATCTaGAAGATTCTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRLGFII*KILCLS
Trigger: GCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAG...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CCA 90 bp GCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCCTCCTGTCATGTTATTaGCTTCTGAGTATCTGTATT +
Preference number: 4 (lower is better)
Translates to: AQGQYPLPICTPCVQTSPLLSCY*LLSICI
Trigger: AATACAGATACTCAGAAGCCAATAACATGACAGGAG...GGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTGTAGACCAACAGCCTTaGAGGACACACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCVDQQP*RTHQGL
Trigger: GAGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTAC...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTTGGGGTCGAGTCGGCTaGTGGGGTTTATCATCTGGA +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCWGRVG*WGLSSG
Trigger: TCCAGATGATAAACCCCAGCAGCCGACTCGACCCCA...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTTACCCCCTCCCCATCTaGACACCCTGTGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASYPLPI*TPCVQT
Trigger: GGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTA...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGTACTCTGCTCCTGGGGTCGAGTCGGCTGCTGGGGTTTATCATCTGGAAGATTCCATTGTTCCTTAGCTaGAATTGCCTTCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: CTLLLGSSRLLGFIIWKIPLFLS*NCLLSA
Trigger: AGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGG...AATCTTCCAGATGATAAACCCCAGCAGCCGACTCGACCCCAGGAGCAGAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCATCCGAAAACAGAAAGTaGGAAAGATCAAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: SPCLHHRRPKASTPSPSASENRK*ERSRYH
Trigger: GTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGA...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTAACCAGGATCTTGGCTaGCAGTTCTGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASNQDLG*QFCLLL
Trigger: CAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTT...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
3UTR CAA 72 bp TTCCACACTTGCAGTCCAGGGACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: FHTCSPGTPRPE*GLTFSRIFLHA
Trigger: AGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCTGGACTGCAAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTGCCAGATGCTGCAGATaGTTCTCCTGTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASARCCR*FSCCSC
Trigger: GCAGCTACAACAGGAGAAGCATCTGCAGCATCTGGC...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAAACCTCCGCCAGATGCTaGAGATGCTTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVRETSARC*RCFSCC
Trigger: ACAACAGGAGAAGCATCTGCAGCATCTGGCGGAGGT...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTTTCCCACCATCCATCTaGTCCATGGGTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASFPPSI*SMGSRA
Trigger: AGCTCTGCTACCCATGGAGCAGATGGATGGTGGGAA...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp AGTGTCCTCCTGAGCCAGGATGTTCTGCAGGAAATCCGCTACCTGAAGCTGGCTATTTTAATCCACAGATaGCAGAGCTTGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SVLLSQDVLQEIRYLKLAILIHR*QSLLGC
Trigger: ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAAT...AGCCAGCTTCAGGTAGCGGATTTCCTGCAGAACATCCTGGCTCAGGAGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTCGCCTCTGTCTCCGCTaGCTCCATCTTTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCRLCLR*LHLSRR
Trigger: GCGCCTGGAAAGATGGAGGCAGCGGAGACAGAGGCG...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCCTTGGCTGGCAGTTCTaGCTCCTCCTGCAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSLGWQF*LLLQAY
Trigger: GTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAG...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGCCTGTACTCTGCTCCTaGGGTCGAGTCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEPVLCS*GRVGCW
Trigger: CCAGCAGCCGACTCGACCCCAGGAGCAGAGTACAGG...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TTGTTTCTTGGCCTGGAGCTGCTCAAAGGCTTCCCGGAGTTGTGTCCGTTTCCTTCCTCCAGGAAGTCATaGCAAATTTACATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LFLGLELLKGFPELCPFPSSRKS*QIYISS
Trigger: GCTGGAGATGTAAATTTGCCATGACTTCCTGGAGGA...AGGAAACGGACACAACTCCGGGAAGCCTTTGAGCAGCTCCAGGCCAAGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTCATCCATCTGCTCCATaGGTAGCAGAGCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCHPSAP*VAELRC
Trigger: GCATCTGAGCTCTGCTACCCATGGAGCAGATGGATG...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CCA 90 bp CCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTAGTCAGAAATCAAACCAGGATCTTGGCTaGCAGTTCTGCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGILIHRCQSLLGCSQKSNQDLG*QFCLLL
Trigger: CAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTT...TGATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCAGGAAATCCGCTACCTaGAGCTGGCTGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSRKSAT*SWLQSS
Trigger: GCTGCTCTGCAGCCAGCTTCAGGTAGCGGATTTCCT...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTGGTTCTGGACTGCTCTaGGTTTCTCCATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASGSGLL*VSPWPF
Trigger: AAATGGCCATGGAGAAACGCAGAGCAGTCCAGAACC...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAATTCTCCTGTTGTAGCTaGCACTGGTTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVREFSCCS*HWFWTA
Trigger: AGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAA...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGTGTCTCCTGTACTCTaGTCCTGGGGTCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCVSPVL*SWGRVG
Trigger: GCCGACTCGACCCCAGGAGCAGAGTACAGGAGACAC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATTCCTTAGCTGCAATTaGCTTCTGTCGGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: TTERDPGILIHRCQSLLGFLSCN*LLSARV
Trigger: GACACGAGCCGACAGAAGGCAATTGCAGCTAAGGAA...TCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTTGGCCATTTGTTTCTTaGCCTGGAGCTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASWPFVS*PGAAQR
Trigger: CCTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCA...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YTTERDPGILIHRCQSLLGRVGC*GLSSGR
Trigger: TCTTCCAGATGATAAACCCCAGCAGCCGACTCGACC...CAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCTCCTCCAGGAAGTCATaGCAAATTTACATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSSSRKS*QIYISS
Trigger: GCTGGAGATGTAAATTTGCCATGACTTCCTGGAGGA...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTTCCGAAAACAGAAAGTaGGAAAGATCAAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSSENRK*ERSRYH
Trigger: GTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGA...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAGGGACACCAAGGCCTaGGTTGGGTCTGACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLRDTKA*VGSDLF
Trigger: GAAAAGGTCAGACCCAACTCAGGCCTTGGTGTCCCT...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR TCA 90 bp ACACCAAGGCCTGAGTTGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCTGCTAGCTTGTCTTTCTTCTaGGAGTCCACCACAAACTCA +
Preference number: 4 (lower is better)
Translates to: TPRPELGLTFSRIFLHAASLSFF*ESTTNS
Trigger: TGAGTTTGTGGTGGACTCTCAGAAGAAAGACAAGCT...AGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395405.5
CDS-3UTR TCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTAGGAAATCCGCTACCTaGAGCTGGCTGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCRKSAT*SWLQSS
Trigger: GCTGCTCTGCAGCCAGCTTCAGGTAGCGGATTTCCT...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCCCACTGGTTCTGGACTaGTCTGCGTTTCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLPLVLD*SAFLHG
Trigger: GCCATGGAGAAACGCAGAGCAGTCCAGAACCAGTGG...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTAACAACAGCTTACCCTaGAGGGTATACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCNNSLP*RVYRSW
Trigger: CCAGCTTCTGTATACCCTGCAGGGTAAGCTGTTGTT...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACGTGTCTCCTGTACTCTaGTCCTGGGGTCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNVSPVL*SWGRVG
Trigger: GCCGACTCGACCCCAGGAGCAGAGTACAGGAGACAC...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGTTCAAACCAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTTACCCCCTCCCCATCTaGACACCCTGTGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: CSNQSQLLSCYWLLSICIYPLPI*TPCVQT
Trigger: GGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTA...AATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTGGTTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTCGCCTCTGTCTCCGCTaGCTCCATCTTTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPRLCLR*LHLSRR
Trigger: GCGCCTGGAAAGATGGAGGCAGCGGAGACAGAGGCG...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTCCATTGTTCCTTAGCTaGAATTGCCTTCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCPLFLS*NCLLSA
Trigger: AGCCGACAGAAGGCAATTGCAGCTAAGGAACAATGG...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTAGTCAGAAATCATGGCCATTTGTTTCTTaGCCTGGAGCTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PGILIHRCQSLLGCSQKSWPFVS*PGAAQR
Trigger: CCTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCA...TGATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp ACACCAAGGCCTGAGTTGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCTGCTTCCTCCAGGAAGTCATaGCAAATTTACATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPRPELGLTFSRIFLHAASSRKS*QIYISS
Trigger: GCTGGAGATGTAAATTTGCCATGACTTCCTGGAGGA...AGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR TCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGTAGACCAACAGCCTTaGAGGACACACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCVDQQP*RTHQGL
Trigger: GAGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTAC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGTTCAAACCAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTACCTCCGCCAGATGCTaGAGATGCTTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CSNQSQLLSCYWLLSICITSARC*RCFSCC
Trigger: ACAACAGGAGAAGCATCTGCAGCATCTGGCGGAGGT...AATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTGGTTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCGAAACCTCCGCCAGATaGTGCAGATGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSETSAR*CRCFSC
Trigger: ACAGGAGAAGCATCTGCAGCATCTGGCGGAGGTTTC...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTGGGGTCGAGTCGGCTaGTGGGGTTTATCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCWGRVG*WGLSSG
Trigger: TCCAGATGATAAACCCCAGCAGCCGACTCGACCCCA...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCTTCCCACCATCCATCTaGTCCATGGGTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLFPPSI*SMGSRA
Trigger: AGCTCTGCTACCCATGGAGCAGATGGATGGTGGGAA...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAAACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LNSGVHSLSCNDGWEVRETDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGTACCCCCTCCCCATCTaGACACCCTGTGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEYPLPI*TPCVQT
Trigger: GGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTA...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTAGTTCTGCCTCCTCCTaGAGGCCTACAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCSSASS*RPTGSK
Trigger: CTTGGAACCTGTAGGCCTGCAGGAGGAGGCAGAACT...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGAGTTCTGCCTCCTCCTaGAGGCCTACAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLESSASS*RPTGSK
Trigger: CTTGGAACCTGTAGGCCTGCAGGAGGAGGCAGAACT...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGCTCTGCGTTTCTCCATaGCCATTTGTTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YTTERDPGILIHRCQSLLLCVSP*PFVSWP
Trigger: AGGCCAAGAAACAAATGGCCATGGAGAAACGCAGAG...CAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGAGCTGCCACTGGTTCTaGACTGCTCTGCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQSCHWF*TALRFS
Trigger: GGAGAAACGCAGAGCAGTCCAGAACCAGTGGCAGCT...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTAGTCAGAAATCACTGGGGTTTATCATCTaGAAGATTCTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGILIHRCQSLLGCSQKSLGFII*KILCLS
Trigger: GCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAG...TGATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTTCCTCCAGGAAGTCATaGCAAATTTACATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASSSRKS*QIYISS
Trigger: GCTGGAGATGTAAATTTGCCATGACTTCCTGGAGGA...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp ACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGAGATGCCAGAGCTTGCTaGGATGTAGTCAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: TTERDPGILIHRCQSLLGDARAC*DVVRNQ
Trigger: TTGATTTCTGACTACATCCCAGCAAGCTCTGGCATC...TCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp ACACCAAGGCCTGAGTTGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCTGCTCATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 4 (lower is better)
Translates to: TPRPELGLTFSRIFLHAAHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...AGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR TCA 90 bp TACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGAGCTTGTCTTTCTTCTaGGAGTCCACCACAAACTCA +
Preference number: 4 (lower is better)
Translates to: YTTERDPGILIHRCQSLLSLSFF*ESTTNS
Trigger: TGAGTTTGTGGTGGACTCTCAGAAGAAAGACAAGCT...CAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGGCCAGATGCTGCAGATaGTTCTCCTGTTGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQARCCR*FSCCSC
Trigger: GCAGCTACAACAGGAGAAGCATCTGCAGCATCTGGC...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGTCAAGAAACCTCCGCCAGATaGTGCAGATGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FSNPKTESGKDQGITRGQETSAR*CRCFSC
Trigger: ACAGGAGAAGCATCTGCAGCATCTGGCGGAGGTTTC...TTGACCTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGGAAACCTCCGCCAGATaGTGCAGATGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQETSAR*CRCFSC
Trigger: ACAGGAGAAGCATCTGCAGCATCTGGCGGAGGTTTC...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGAACGCTCCCTCACCTCTaGAGAAACCTCCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRTLPHL*RNLRQM
Trigger: CATCTGGCGGAGGTTTCTGCAGAGGTGAGGGAGCGT...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTCCCTCCTTCCACACTTaGAGTCCAGGGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPPSFHT*SPGTPR
Trigger: CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGG...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTATTTTAATCCACAGATaGCAGAGCTTGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCILIHR*QSLLGC
Trigger: ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAAT...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACCTTGGCTGGCAGTTCTaGCTCCTCCTGCAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: LSICINSCSCQHMKMNKYLGWQF*LLLQAY
Trigger: GTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAG...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGTTCAAACCAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTTTCCTTAGCTGCAATTaGCTTCTGTCGGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: CSNQSQLLSCYWLLSICIFLSCN*LLSARV
Trigger: GACACGAGCCGACAGAAGGCAATTGCAGCTAAGGAA...AATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTGGTTTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGTCAACAACAGCTTACCCTCTaGAGAAACCTCCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: FSNPKTESGKDQGITRGQQQLTL*RNLRQM
Trigger: CATCTGGCGGAGGTTTCTGCAGAGGGTAAGCTGTTG...TTGACCTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTGGCCATTTGTTTCTTaGCCTGGAGCTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSWPFVS*PGAAQR
Trigger: CCTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCA...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTACTCAACCAGGATCTTaGCTGGCAGTTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCTQPGS*LAVLPP
Trigger: AGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGT...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGTTCTCCTGTTGTAGCTaGCACTGGTTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQFSCCS*HWFWTA
Trigger: AGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAA...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACACCTCCGCCAGATGCTaGAGATGCTTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNTSARC*RCFSCC
Trigger: ACAACAGGAGAAGCATCTGCAGCATCTGGCGGAGGT...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACACGCTCCCTCACCTCTaGAGAAACCTCCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LSICINSCSCQHMKMNKYTLPHL*RNLRQM
Trigger: CATCTGGCGGAGGTTTCTGCAGAGGTGAGGGAGCGT...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGGGGTCGAGTCGGCTaGTGGGGTTTATCATCTGGA +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRWGRVG*WGLSSG
Trigger: TCCAGATGATAAACCCCAGCAGCCGACTCGACCCCA...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTTACCCCCTCCCCATCTaGACACCCTGTGTTCAAACC +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPYPLPI*TPCVQT
Trigger: GGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTA...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGCCACATATAACCACCTaGCTAAAACATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YTTERDPGILIHRCQSLLPHITT*LKHSPP
Trigger: AGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGG...CAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGTGGCCATTTGTTTCTTaGCCTGGAGCTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEWPFVS*PGAAQR
Trigger: CCTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCA...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCCTGGGGTTTATCATCTaGAAGATTCTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSLGFII*KILCLS
Trigger: GCTGAGGCAGAGAATCTTCCAGATGATAAACCCCAG...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACGGTCGAGTCGGCTGCTaGGGTTTATCATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNGRVGC*GLSSGR
Trigger: TCTTCCAGATGATAAACCCCAGCAGCCGACTCGACC...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGAGGTTTCCAAGTTTCTaGAACACCCTGTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLERFPSF*NTLSSS
Trigger: GGAGCTTGACAGGGTGTTTCAGAAACTTGGAAACCT...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR TCA 90 bp CTCCTCCTTGAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTCCTAAAACAGTCAGATaGGCTCACTGTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: LLLELNSPCLHHRRPKASPKTVR*AHCYNS
Trigger: AGAATTATAACAGTGAGCTCATCTGACTGTTTTAGG...ACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTCAAGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTCCTAAAACAGTCAGATaGGCTCACTGTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: TERDPGILIHRCQSLLGCPKTVR*AHCYNS
Trigger: AGAATTATAACAGTGAGCTCATCTGACTGTTTTAGG...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACTTCTCCTGTTGTAGCTaGCACTGGTTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNFSCCS*HWFWTA
Trigger: AGCAGTCCAGAACCAGTGGCAGCTACAACAGGAGAA...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGTTCTGCCTGCTaGTTCAGGTTTCCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCSCSAC*FRFPSF
Trigger: GAAACTTGGAAACCTGAAGCAGCAGGCAGAACAGGA...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGACGCTCCTGTTCTGCCTaGTGCTTCAGGTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRRSCSA*CFRFPS
Trigger: ACTTGGAAACCTGAAGCAGCAGGCAGAACAGGAGCG...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGAACAACAGCTTACCCTaGAGGGTATACAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLENNSLP*RVYRSW
Trigger: CCAGCTTCTGTATACCCTGCAGGGTAAGCTGTTGTT...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGGATCTTTCTCCATGCTaGTGTCCTCCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQDLSPC*CPPGSH
Trigger: ATGACTTCCTGGAGGACAGCAGCATGGAGAAAGATC...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGATCTTTCTCCATGCTaGTGTCCTCCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCDLSPC*CPPGSH
Trigger: ATGACTTCCTGGAGGACAGCAGCATGGAGAAAGATC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSTDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACAGTTCTGCCTCCTCCTaGAGGCCTACAGGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSICINSCSCQHMKMNKYSSASS*RPTGSK
Trigger: CTTGGAACCTGTAGGCCTGCAGGAGGAGGCAGAACT...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAATTCCTTAGCTGCAATTaGCTTCTGTCGGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKFLSCN*LLSARV
Trigger: GACACGAGCCGACAGAAGGCAATTGCAGCTAAGGAA...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGTCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGTAATGATGGTTaGGAGGTGAGGGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCSCNDG*EVREVR
Trigger: TCTGACTTCCCTCACCTCCCAACCATCATTACAGGA...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTGGCCTGAGTTGGGTCTaGCCTTTTCTAGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPGLSWV*PFLGSF
Trigger: GAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCC...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACTCCTGTTCTGCCTGCTaGTTCAGGTTTCCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNSCSAC*FRFPSF
Trigger: GAAACTTGGAAACCTGAAGCAGCAGGCAGAACAGGA...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCATTTTAATCCACAGATaGCAGAGCTTGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLILIHR*QSLLGC
Trigger: ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAAT...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGGATGCCAGAGCTTGCTaGGATGTAGTCAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQDARAC*DVVRNQ
Trigger: TTGATTTCTGACTACATCCCAGCAAGCTCTGGCATC...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCCATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 4 (lower is better)
Translates to: NKYTTERDPGILIHRCQSHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR GCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATCCTGTTCTGCCTGCTaGTTCAGGTTTCCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRSCSAC*FRFPSF
Trigger: GAAACTTGGAAACCTGAAGCAGCAGGCAGAACAGGA...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR GCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACACAGATGCCAGAGCTTaGTGGGATGTAGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNTDARA*WDVVRN
Trigger: ATTTCTGACTACATCCCAGCAAGCTCTGGCATCTGT...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACAGGTTTCCAAGTTTCTaGAACACCCTGTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSICINSCSCQHMKMNKYRFPSF*NTLSSS
Trigger: GGAGCTTGACAGGGTGTTTCAGAAACTTGGAAACCT...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR TCA 90 bp TTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGTCAAGAACAAATACACAACTaGGAGAGATCCAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: FSNPKTESGKDQGITRGQEQIHN*ERSRDF
Trigger: AAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTC...TTGACCTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGAACAAATACACAACTaGGAGAGATCCAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: QSQLLSCYWLLSICINSCEQIHN*ERSRDF
Trigger: AAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 4 (lower is better)
Translates to: LLSCYWLLSICINSCSCQHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGAGATGCCAGAGCTTGCTaGGATGTAGTCAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRDARAC*DVVRNQ
Trigger: TTGATTTCTGACTACATCCCAGCAAGCTCTGGCATC...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TGTTCAAACCAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTCTCCTGTCATGTTATTaGCTTCTGAGTATCTGTATT +
Preference number: 4 (lower is better)
Translates to: CSNQSQLLSCYWLLSICILLSCY*LLSICI
Trigger: AATACAGATACTCAGAAGCCAATAACATGACAGGAG...AATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTGGTTTGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp TTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGTCAACTCCTGTCATGTTATTaGCTTCTGAGTATCTGTATT +
Preference number: 4 (lower is better)
Translates to: FSNPKTESGKDQGITRGQLLSCY*LLSICI
Trigger: AATACAGATACTCAGAAGCCAATAACATGACAGGAG...TTGACCTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAATCCGAAAACAGAAAGTaGGAAAGATCAAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKSENRK*ERSRYH
Trigger: GTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGA...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTGAACAAATACACAACTaGGAGAGATCCAGGGATTTT +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPEQIHN*ERSRDF
Trigger: AAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTC...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGACATTCTCCTCCTCCTTaGATTAAATTCACCATGTCT +
Preference number: 4 (lower is better)
Translates to: MKMNKYTTERDPGILIHRHSPPP*IKFTMS
Trigger: AGACATGGTGAATTTAATTCAAGGAGGAGGAGAATG...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACCCTAAAACAGTCAGATaGGCTCACTGTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: WLLSICINSCSCQHMKMNPKTVR*AHCYNS
Trigger: AGAATTATAACAGTGAGCTCATCTGACTGTTTTAGG...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CCA 90 bp GTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCAACAAACTCCTGTCATGTTATTaGCTTCTGAGTATCTGTATT +
Preference number: 4 (lower is better)
Translates to: VIILVHRKNLSTKKGLNKLLSCY*LLSICI
Trigger: AATACAGATACTCAGAAGCCAATAACATGACAGGAG...TTTGTTGAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR TCA 90 bp AATAAAATTATCTTCCCACATATAACCACCTGCCTAAAACATTCTCCTCCTCCTCCTAAAACAGTCAGATaGGCTCACTGTTATAATTCT +
Preference number: 4 (lower is better)
Translates to: NKIIFPHITTCLKHSPPPPKTVR*AHCYNS
Trigger: AGAATTATAACAGTGAGCTCATCTGACTGTTTTAGG...AGGAGGAGGAGAATGTTTTAGGCAGGTGGTTATATGTGGGAAGATAATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGTCCCTCCTTCCACACTaGCAGTCCAGGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLSLLPH*QSRDTK
Trigger: CTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGA...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS GCA 90 bp CTGAGAGTCCACCACAAACTCAACCAGGATCTTGGCTGGCAGTTCTaGCTCCTCCTGCAGGCCTACAGGTTCCAAGATGCCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: LRVHHKLNQDLGWQF*LLLQAYRFQDACHL
Trigger: GAGGTGGCAGGCATCTTGGAACCTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGACTCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361148.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR CAA 90 bp CATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAAAACTCAACCAGGATCTaGGCTGGCAGTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: HRRPKASTPSPSAHPVFKNSTRI*AGSSAS
Trigger: GGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTT...TTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SPCLHHRRPKASTPSPSATPRPE*GLTFSR
Trigger: CCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS GCA 90 bp TGTACATACCACCACAAACTCAACCAGGATCTTGGCTGGCAGTTCTaGCTCCTCCTGCAGGCCTACAGGTTCCAAGATGCCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: CTYHHKLNQDLGWQF*LLLQAYRFQDACHL
Trigger: GAGGTGGCAGGCATCTTGGAACCTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGTATGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS-3UTR CAA 90 bp GCCAGTGCTGCCCTGTATCTCAGTAAGAGGAGCCAGGACCAGACCCTGGCTTCTATGGCCATTTGTTTCTaGGCCTGGAGCTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ASAALYLSKRSQDQTLASMAICF*AWSCSK
Trigger: CTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCAT...AGAAGCCAGGGTCTGGTCCTGGCTCCTCTTACTGAGATACAGGGCAGCACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CAA 90 bp GCCTTCTGTCGGCTCGTGTCTTCAGAAGCCAAGGGGTCGAGACCCTTAGCAGTGCACAGATGCCAGAGCTaGCTGGGATGTAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: AFCRLVSSEAKGSRPLAVHRCQS*LGCSQK
Trigger: TTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTG...CACTGCTAAGGGTCTCGACCCCTTGGCTTCTGAAGACACGAGCCGACAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CAA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTAACTCAACCAGGATCTaGGCTGGCAGTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSNSTRI*AGSSAS
Trigger: GGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTT...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp AGTGTCCTCCTGAGCCAGGATGTTCTGCAGGAAATCCGCTACCTGAAGCTGGCTAACTCAACCAGGATCTaGGCTGGCAGTTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SVLLSQDVLQEIRYLKLANSTRI*AGSSAS
Trigger: GGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTT...AGCCAGCTTCAGGTAGCGGATTTCCTGCAGAACATCCTGGCTCAGGAGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CAA 90 bp GTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCACACCCTGCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGC +
Preference number: 5 (lower is better)
Translates to: VCIIGGPRPVPPPHLHTLLQLFP*FLSCNC
Trigger: GCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAG...CAGGGTGTGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CCAGTACCCCCTCCCCATCTGCACACCCTGTGTTCAAACCAGTCCCAGCTCCTGAGGCTCGCTCTCATCTaGTACATACCACCACAAACT +
Preference number: 5 (lower is better)
Translates to: PVPPPHLHTLCSNQSQLLRLALI*YIPPQT
Trigger: AGTTTGTGGTGGTATGTACAAGATGAGAGCGAGCCT...CAGGAGCTGGGACTGGTTTGAACACAGGGTGTGCAGATGGGGAGGGGGTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489649.6
CDS-3UTR CAA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGTGTAGACCAACAGCCTaGAAGGACACACCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRCRPTA*KDTPGS
Trigger: AGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTACA...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CAA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTTTGGTGAGGCCAATTTaGATGGCCTCTACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSLVRPI*MASTCS
Trigger: GGAGCACGTAGAGGCCATCAAAATTGGCCTCACCAA...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS CCA 90 bp CCAGTGCTGCCCTGTATCTCAGTAAGAGGAGCCAGGACCAGACCCTaGCTTCTGAAAGGCTCGCTCTCATCTTGTACATACCACCACAAA +
Preference number: 5 (lower is better)
Translates to: PVLPCISVRGARTRP*LLKGSLSSCTYHHK
Trigger: TTTGTGGTGGTATGTACAAGATGAGAGCGAGCCTTTCAGAAGCCAGGGTCTGGTCCTGGCTCCTCTTACTGAGATACAGGGCAGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS-3UTR CAA 90 bp AATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTATGGCCATTTGTTTCTaGGCCTGGAGCTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: NSPCLHHRRPKASTPSPSMAICF*AWSCSK
Trigger: CTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCAT...AGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS TCA 90 bp TGCAACACTGGGCCTCCTTCCCATCAGCCAAATGGGAGACCTAACTaGAATCCTCCTTCCTTCCCCACTCAGGTCAGCTGCTACTACAAT +
Preference number: 5 (lower is better)
Translates to: CNTGPPSHQPNGRPN*NPPSFPTQVSCYYN
Trigger: ATTGTAGTAGCAGCTGACCTGAGTGGGGAAGGAAGGAGGATTTCAGTTAGGTCTCCCATTTGGCTGATGGGAAGGAGGCCCAGTGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494312.5
CDS GCA 90 bp CCTGAGCCAGGATGTTCTGCAGGAAATCCGCTACCTGAAGCTGGCTaGAGAGCAGCTTGTCTTTCTTCTGAGAGTCCACCACAAACTCAA +
Preference number: 5 (lower is better)
Translates to: PEPGCSAGNPLPEAG*RAACLSSESPPQTQ
Trigger: TTGAGTTTGTGGTGGACTCTCAGAAGAAAGACAAGCTGCTCTGCAGCCAGCTTCAGGTAGCGGATTTCCTGCAGAACATCCTGGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361148.6
ENST00000373944.8
ENST00000395405.5
CDS-3UTR CAA 90 bp TCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCCCATCTGCAGCTCCTGTCATGTTATaGGCTTCTGAGTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: SPCLHHRRPKASTPSPSAAPVML*ASEYLY
Trigger: ATACAGATACTCAGAAGCCAATAACATGACAGGAGC...TGCAGATGGGGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp GAATTAAATTCACCATGTCTGCATCATAGGAGGCCCAAGGCCAGTACCCCCTCCATGGCCATTTGTTTCTaGGCCTGGAGCTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: ELNSPCLHHRRPKASTPSMAICF*AWSCSK
Trigger: CTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCAT...GGAGGGGGTACTGGCCTTGGGCCTCCTATGATGCAGACATGGTGAATTTAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp AGAGGTAAACCAGGCTTTCCCTCCTTCCACACTTGCAGTCCAGGGACACCAAGGCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGC +
Preference number: 5 (lower is better)
Translates to: RGKPGFPSFHTCSPGTPRLQLFP*FLSCNC
Trigger: GCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAG...CCTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGAAAGCCTGGTTTACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395405.5
CDS-3UTR CAA 90 bp ACACCAAGGCCTGAGTTGGGTCTGACCTTTTCTAGGATCTTTCTCCATGCTGCTTTGGTGAGGCCAATTTaGATGGCCTCTACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TPRPELGLTFSRIFLHAALVRPI*MASTCS
Trigger: GGAGCACGTAGAGGCCATCAAAATTGGCCTCACCAA...AGCAGCATGGAGAAAGATCCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395405.5
CDS-3UTR CAA 90 bp CTGAACTCAGGAGTTCACAGTCTTTCCTGTAATGATGGTTGGGAGGTGAGGGAACACAGATGCCAGAGCTaGCTGGGATGTAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LNSGVHSLSCNDGWEVREHRCQS*LGCSQK
Trigger: TTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTG...TTCCCTCACCTCCCAACCATCATTACAGGAAAGACTGTGAACTCCTGAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGTCCCTCCTTCCACACTaGCAGTCCAGGGACACCAAG +
Preference number: 5 (lower is better)
Translates to: LLSCYWLLSICINSCSCQSLLPH*QSRDTK
Trigger: CTTGGTGTCCCTGGACTGCAAGTGTGGAAGGAGGGA...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CAA 90 bp CTCACTGTTATAATTCTGGTTCACCGCAAGAACCTTAGCACAAAGAAAGGACTCTGTAGACCAACAGCCTaGAAGGACACACCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTVIILVHRKNLSTKKGLCRPTA*KDTPGS
Trigger: AGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTACA...GAGTCCTTTCTTTGTGCTAAGGTTCTTGCGGTGAACCAGAATTATAACAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp AACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTGTAGACCAACAGCCTaGAAGGACACACCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: NKYTTERDPGILIHRCQSCRPTA*KDTPGS
Trigger: AGACCCTGGTGTGTCCTTCAAGGCTGTTGGTCTACA...GCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp ACTGAGAGAGATCCAGGGATTTTAATCCACAGATGCCAGAGCTTGCTGGGATGTCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGC +
Preference number: 5 (lower is better)
Translates to: TERDPGILIHRCQSLLGCLQLFP*FLSCNC
Trigger: GCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAG...ACATCCCAGCAAGCTCTGGCATCTGTGGATTAAAATCCCTGGATCTCTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp TGTTCAAACCAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTTTTCTCCATGGCCATTaGTTTCTTGGCCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CSNQSQLLSCYWLLSICIFLHGH*FLGLEL
Trigger: CAGCTCCAGGCCAAGAAACAAATGGCCATGGAGAAA...AATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTGGTTTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp TTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGTCAATTGGTGAGGCCAATTTaGATGGCCTCTACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FSNPKTESGKDQGITRGQLVRPI*MASTCS
Trigger: GGAGCACGTAGAGGCCATCAAAATTGGCCTCACCAA...TTGACCTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCACAGATGCCAGAGCTaGCTGGGATGTAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LLSCYWLLSICINSCSCQHRCQS*LGCSQK
Trigger: TTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTG...CTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp TGGCTTCTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACCACAGATGCCAGAGCTaGCTGGGATGTAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: WLLSICINSCSCQHMKMNHRCQS*LGCSQK
Trigger: TTTCTGACTACATCCCAGCAAGCTCTGGCATCTGTG...GTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAGAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACACACCAAGGCCTGAGTaGGGTCTGACCTTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: LSICINSCSCQHMKMNKYTPRPE*GLTFSR
Trigger: CCTAGAAAAGGTCAGACCCAACTCAGGCCTTGGTGT...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318387.6
ENST00000395405.5
CDS-3UTR CAA 90 bp CTGAGTATCTGTATTAATAGTTGTTCCTGCCAGCATATGAAGATGAACAAATACATGGCCATTTGTTTCTaGGCCTGGAGCTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LSICINSCSCQHMKMNKYMAICF*AWSCSK
Trigger: CTTTGAGCAGCTCCAGGCCAAGAAACAAATGGCCAT...GTATTTGTTCATCTTCATATGCTGGCAGGAACAACTATTAATACAGATACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp ACATCTTCTCCAATCCGAAAACAGAAAGTGGGAAAGATCAAGGTATCACTAGAGGCTCCTGTCATGTTATaGGCTTCTGAGTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: TSSPIRKQKVGKIKVSLEAPVML*ASEYLY
Trigger: ATACAGATACTCAGAAGCCAATAACATGACAGGAGC...CTCTAGTGATACCTTGATCTTTCCCACTTTCTGTTTTCGGATTGGAGAAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp CAGTCCCAGCTCCTGTCATGTTATTGGCTTCTGAGTATCTGTATTAATAGTTGTGCTCCTGTCATGTTATaGGCTTCTGAGTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: QSQLLSCYWLLSICINSCAPVML*ASEYLY
Trigger: ATACAGATACTCAGAAGCCAATAACATGACAGGAGC...ACAACTATTAATACAGATACTCAGAAGCCAATAACATGACAGGAGCTGGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS-3UTR CAA 90 bp ATGAAGATGAACAAATACACAACTGAGAGAGATCCAGGGATTTTAATCCACAGAGCTCCTGTCATGTTATaGGCTTCTGAGTATCTGTAT +
Preference number: 5 (lower is better)
Translates to: MKMNKYTTERDPGILIHRAPVML*ASEYLY
Trigger: ATACAGATACTCAGAAGCCAATAACATGACAGGAGC...TCTGTGGATTAAAATCCCTGGATCTCTCTCAGTTGTGTATTTGTTCATCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000489649.6
CDS GCA 72 bp AGGAATGAGTACATGAGTGAGGGTGGCCTGCTAGCCTaGCTCCCTGCAACACTGGGCCTCCTTCCCATCAGC +
Preference number: 6 (lower is better)
Translates to: RNEYMSEGGLLA*LPATLGLLPIS
Trigger: GCTGATGGGAAGGAGGCCCAGTGTTGCAGGGAGGCAGGCTAGCAGGCCACCCTCACTCATGTACTCATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494312.5
CDS GCA 72 bp CTCCTGCTGAGTCCCTGTCTTACGCTCCCTCACCTCTaGAGAAACCTCCGCCAGATGCTGCAGATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LLLSPCLTLPHL*RNLRQMLQMLL
Trigger: GAGAAGCATCTGCAGCATCTGGCGGAGGTTTCTGCAGAGGTGAGGGAGCGTAAGACAGGGACTCAGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318387.6
ENST00000373944.8
ENST00000395405.5
ENST00000460654.5
ENST00000467523.1
ENST00000494312.5
CDS TCA 72 bp GGGCCTCCTTCCCATCAGCCAAATGGGAGACCTAACTaGAATCCTCCTTCCTTCCCCACTCAGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GPPSHQPNGRPN*NPPSFPTQVSC
Trigger: GCAGCTGACCTGAGTGGGGAAGGAAGGAGGATTTCAGTTAGGTCTCCCATTTGGCTGATGGGAAGGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494312.5
CDS CCA 72 bp CTGAGAGTCCACCACAAACTCAACCAGGATCTTGGCTaGCAGTTCTGCCTCCTCCTGCAGGCCTACAGGTTC +
Preference number: 6 (lower is better)
Translates to: LRVHHKLNQDLG*QFCLLLQAYRF
Trigger: GAACCTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGACTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361148.6
ENST00000373944.8
ENST00000395405.5
CDS CCA 72 bp TCTTCTGAGAGTCCACCACAAACTCAACCAGGATCTTaGCTGGCAGTTCTGCCTCCTCCTGCAGGCCTACAG +
Preference number: 6 (lower is better)
Translates to: SSESPPQTQPGS*LAVLPPPAGLQ
Trigger: CTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGACTCTCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361148.6
ENST00000373944.8
ENST00000395405.5
CDS CCA 72 bp TGTACATACCACCACAAACTCAACCAGGATCTTGGCTaGCAGTTCTGCCTCCTCCTGCAGGCCTACAGGTTC +
Preference number: 6 (lower is better)
Translates to: CTYHHKLNQDLG*QFCLLLQAYRF
Trigger: GAACCTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGTATGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS CAA 90 bp AGGAGCCAGGACCAGACCCTGGCTTCTGAAAGGCTCGCTCTCATCTaGTACATACCACCACAAACTCAACCAGGATCTTGGCTGGCAGTT +
Preference number: 6 (lower is better)
Translates to: RSQDQTLASERLALI*YIPPQTQPGSWLAV
Trigger: AACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGTATGTACAAGATGAGAGCGAGCCTTTCAGAAGCCAGGGTCTGGTCCTGGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS CCA 72 bp ATCTTGTACATACCACCACAAACTCAACCAGGATCTTaGCTGGCAGTTCTGCCTCCTCCTGCAGGCCTACAG +
Preference number: 6 (lower is better)
Translates to: ILYIPPQTQPGS*LAVLPPPAGLQ
Trigger: CTGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGTATGTACAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS CAA 72 bp CATCTTGTACATACCACCACAAACTCAACCAGGATCTaGGCTGGCAGTTCTGCCTCCTCCTGCAGGCCTACA +
Preference number: 6 (lower is better)
Translates to: HLVHTTTNSTRI*AGSSASSCRPT
Trigger: TGTAGGCCTGCAGGAGGAGGCAGAACTGCCAGCCAAGATCCTGGTTGAGTTTGTGGTGGTATGTACAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467523.1
ENST00000489649.6
ENST00000494312.5
CDS CAA 90 bp GATGGCCTCTACGTGCTCCCTGTAGGTGGCCTTCAGCTCTTTCCATaGTTCCTTAGCTGCAATTGCCTTCTGTCCTCCTTACAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: DGLYVLPVGGLQLFP*FLSCNCLLSSLQVS
Trigger: GGAAACCTGTAAGGAGGACAGAAGGCAATTGCAGCTAAGGAACAATGGAAAGAGCTGAAGGCCACCTACAGGGAGCACGTAGAGGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467523.1