Pregenerated sensors for ZUP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000153975Ensembl transcript IDs: ENST00000368573.5, ENST00000368576.8, ENST00000471919.1, ENST00000485498.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCCCTTTGGGCCTCGCTaGCAGACGAGTGCGTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPPFGPR*QTSACA Trigger: CGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCAGCAGCTGCCACACTaGGCTCCGCTAGGCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPQQLPH*APLGFP Trigger: GGGGAAGCCTAGCGGAGCTCAGTGTGGCAGCTGCTG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTCGCTGGCAGACGAGTaGGTGCGCGGCGTCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPSLADE*VRGVQY Trigger: GTACTGGACGCCGCGCACGCACTCGTCTGCCAGCGA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTGGCAGACGAGTGCGTaGGCGGCGTCCAGTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPWQTSA*AASSTS Trigger: AGAGGTACTGGACGCCGCGCACGCACTCGTCTGCCA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCGCTAGGCTTCCCCTTTaGGCCTCGCTGGCAGACGAG | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPARLPL*ASLADE Trigger: CTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCCTAGC...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCAGGAAAGCATGGTATTaGCAAGTAGCGGCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPRKAWY*QVAAQR Trigger: CCTCTGGGCCGCTACTTGTCAATACCATGCTTTCCT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCAAAGTGATCCACCACTaGAGAAAGCCACACCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPKVIHH*RKPHPS Trigger: AGACGGGTGTGGCTTTCTTCAGTGGTGGATCACTTT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCGAACTTCCAACACCTTaGCCCTCAGTACCTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPELPTP*PSVPHS Trigger: TGAATGAGGTACTGAGGGCCAAGGTGTTGGAAGTTC...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCAGATCACCAGAACACTaGACTCTATCCATGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPRSPEH*TLSMPC Trigger: GCAAGGCATGGATAGAGTCCAGTGTTCTGGTGATCT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCCCGTCTCACATCTGTaGCAGCATTCTGATAATACC | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPPVSHL*QHSDNT Trigger: GGTATTATCAGAATGCTGCCACAGATGTGAGACGGG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTTTCATGTCTGGTTCTaGGGTTACTGTTTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPFHVWF*GYCFTT Trigger: TGTGGTGAAACAGTAACCTCAGAACCAGACATGAAA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCTATCCATGCCTTGCTaGAAGCTGTTTTCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPLSMPC*KLFSSK Trigger: TTTGGAAGAAAACAGCTTTCAGCAAGGCATGGATAG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCACTGGACTCTATCCATaGCTTGCTGAAAGCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPTGLYP*LAESCF Trigger: AAAACAGCTTTCAGCAAGGCATGGATAGAGTCCAGT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTTATTTCGGTCAGGCTaGACTGTTTTTCCCTACTTT | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPLFRSG*TVFPYF Trigger: AAAGTAGGGAAAAACAGTCCAGCCTGACCGAAATAA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCATCATAATTCACACCTaGCAACTTGCAAAATGGACA | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPIIIHT*QLAKWT Trigger: TGTCCATTTTGCAAGTTGTCAGGTGTGAATTATGAT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR TCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTGCTTTGTTTTCACATaGGTTTCCATATCTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPCFVFT*VSISSL Trigger: CAGTGAAGATATGGAAACTCATGTGAAAACAAAGCA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCTATTTTTCCACAGAATaGACATTCAGGAGGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPYFSTE*TFRRTV Trigger: TACAGTCCTCCTGAATGTCCATTCTGTGGAAAAATA...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR GCA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCATAATACCTATGAAGTaGTTCAATAATTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LCRLKMNESDPPLKKATPIIPMK*FNNSCS Trigger: GCTGCAGGAATTATTGAAGCACTTCATAGGTATTAT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS GCA 90 bp | GCTCCGCTAGGCTTCCCCTTTGGGCCTCGCTGGCAGACGAGTGCGTaGGCGGCGTCCAGTACCTCTCCTGGCCTGATGACTGAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: APLGFPFGPRWQTSA*AASSTSPGLMTEAR Trigger: CCTGGCCTCAGTCATCAGGCCAGGAGAGGTACTGGACGCCGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCCTAGCGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS CCA 90 bp | CAGAGGCCAGCAGCTGCCACACTGAGCTCCGCTAGGCTTCCCCTTTaGGCCTCGCTGGCAGACGAGTGCGTGCGCGGCGTCCAGTACCTC | + |
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Preference number: 5 (lower is better) Translates to: QRPAAATLSSARLPL*ASLADECVRGVQYL Trigger: GAGGTACTGGACGCCGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCCTAGCGGAGCTCAGTGTGGCAGCTGCTGGCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCGGAACTTCCAACACCTaGGCCCTCAGTACCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPGTSNT*ALSTSF Trigger: GAATGAGGTACTGAGGGCCAAGGTGTTGGAAGTTCC...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCAGGAAAGCATGGTATaGACAAGTAGCGGCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPQESMV*TSSGPE Trigger: CTCTGGGCCGCTACTTGTCAATACCATGCTTTCCTG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCTTTCTGTCTTCTTCTaGCTGAAGCTGGTGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPLSVFF*LKLVSQ Trigger: TTGGCTCACCAGCTTCAGCAAGAAGAAGACAGAAAG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCGACTCTATCCATGCCTaGCTGAAAGCTGTTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPDSIHA*LKAVFF Trigger: GAAGAAAACAGCTTTCAGCAAGGCATGGATAGAGTC...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCCACACTGTAGGGTGTaGTCTTTCTTGTTATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPPHCRV*SFLLSE Trigger: TTCAGATAACAAGAAAGACAACACCCTACAGTGTGG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCACAATCATAGAGTGGTaGATCACAGTCTTCCAATGG | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPTIIEW*ITVFQW Trigger: CCATTGGAAGACTGTGATCAACCACTCTATGATTGT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCAGGAGGACTGTATGTaGTTTCATAAACAGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPQEDCM*FHKQIL Trigger: AAGGATCTGTTTATGAAACAACATACAGTCCTCCTG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCAGGGTGTTGTCTTTCTaGTTATCTGAAGTTCCATAT | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPRVLSF*LSEVPY Trigger: ATATGGAACTTCAGATAACAAGAAAGACAACACCCT...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCGGAATGTCTAAAAGATaGGCATGCTTTGTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPGMSKR*ACFVFT Trigger: TGTGAAAACAAAGCATGCCAATCTTTTAGACATTCC...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS-3UTR CAA 90 bp | CTTTGTCGCCTAAAGATGAATGAAAGTGATCCACCACTGAAGAAAGCCACACCCCTTCTATTTCTTGTCTaGATTCTTCAGATCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LCRLKMNESDPPLKKATPLLFLV*ILQISS Trigger: AGAGGAGATCTGAAGAATCAAGACAAGAAATAGAAG...GGGTGTGGCTTTCTTCAGTGGTGGATCACTTTCATTCATCTTTAGGCGACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS CCA 90 bp | CATAGAGTGGTTGATCACAGTCTTCCAATGGAATGTCTAAAAGATTaGCATGCTTTGTTTTCACATGAGTTTCCATATCTTCACTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: HRVVDHSLPMECLKD*HALFSHEFPYLHCA Trigger: AGCACAGTGAAGATATGGAAACTCATGTGAAAACAAAGCATGCCAATCTTTTAGACATTCCATTGGAAGACTGTGATCAACCACTCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS GCA 90 bp | ATCTGGTATTGCTTATGTTTTAAATTTCCCATAGATTTCCGAAGTTaGTTGAGACTGCTAGCCTCTATGTCTTGCTTTAATAATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: IWYCLCFKFPIDFRS*LRLLASMSCFNNFC Trigger: GCAGAAATTATTAAAGCAAGACATAGAGGCTAGCAGTCTCAAGCAACTTCGGAAATCTATGGGAAATTTAAAACATAAGCAATACCAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368576.8 ENST00000485498.1 |
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| CDS CCA 72 bp | GCAGCTGCCACACTGAGCTCCGCTAGGCTTCCCCTTTaGGCCTCGCTGGCAGACGAGTGCGTGCGCGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: AAATLSSARLPL*ASLADECVRGV Trigger: GACGCCGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCCTAGCGGAGCTCAGTGTGGCAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS TCA 72 bp | ATGCACAACCGGCCCAGAGGCCAGCAGCTGCCACACTaGGCTCCGCTAGGCTTCCCCTTTGGGCCTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MHNRPRGQQLPH*APLGFPFGPRW Trigger: CCAGCGAGGCCCAAAGGGGAAGCCTAGCGGAGCTCAGTGTGGCAGCTGCTGGCCTCTGGGCCGGTTGTGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471919.1 |
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| CDS GCA 72 bp | GGCTTCCCCTTTGGGCCTCGCTGGCAGACGAGTGCGTaGGCGGCGTCCAGTACCTCTCCTGGCCTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: GFPFGPRWQTSA*AASSTSPGLMT Trigger: AGTCATCAGGCCAGGAGAGGTACTGGACGCCGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS GCA 72 bp | GCTAGGCTTCCCCTTTGGGCCTCGCTGGCAGACGAGTaGGTGCGCGGCGTCCAGTACCTCTCCTGGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ARLPLWASLADE*VRGVQYLSWPD Trigger: ATCAGGCCAGGAGAGGTACTGGACGCCGCGCACGCACTCGTCTGCCAGCGAGGCCCAAAGGGGAAGCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS CCA 72 bp | CCACCACTGAAGAAAGCCACACCCGTCTCACATCTGTaGCAGCATTCTGATAATACCTATGAAGTGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PPLKKATPVSHL*QHSDNTYEVLQ Trigger: TTGAAGCACTTCATAGGTATTATCAGAATGCTGCCACAGATGTGAGACGGGTGTGGCTTTCTTCAGTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS TCA 72 bp | TTGATTCTTCAAGGAATCTTCTCGGCTGTAAAGACTTaGGAAGCTTGTCTCCTGGCAAGTTTCTCCTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: LILQGIFSAVKT*EACLLASFSSR Trigger: TCTAGAGGAGAAACTTGCCAGGAGACAAGCTTCTCAAGTCTTTACAGCCGAGAAGATTCCTTGAAGAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368576.8 ENST00000485498.1 |
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| CDS CAA 90 bp | TCAATATCCATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTaGATTTGTGAAAATCAACAATATGACACTTTACCCTTAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SISIQISEGVYPKDQ*ICENQQYDTLPLGR Trigger: CCTCCCTAAGGGTAAAGTGTCATATTGTTGATTTTCACAAATCAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368576.8 |
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| CDS CAA 72 bp | ATTCAAATAAGCGAGGGTGTGTACCCAAAGGACCAGTaGATTTGTGAAAATCAACAATATGACACTTTACCC | + |
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Preference number: 6 (lower is better) Translates to: IQISEGVYPKDQ*ICENQQYDTLP Trigger: GGGTAAAGTGTCATATTGTTGATTTTCACAAATCAACTGGTCCTTTGGGTACACACCCTCGCTTATTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368576.8 |
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| CDS CAA 90 bp | GTTGATCACAGTCTTCCAATGGAATGTCTAAAAGATTGGCATGCTTaGTTTTCACATGAGTTTCCATATCTTCACTGTGCTCCTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: VDHSLPMECLKDWHA*FSHEFPYLHCAPLF Trigger: AAATAGAGGAGCACAGTGAAGATATGGAAACTCATGTGAAAACAAAGCATGCCAATCTTTTAGACATTCCATTGGAAGACTGTGATCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368573.5 ENST00000368576.8 ENST00000471919.1 |
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| CDS CAA 90 bp | GCTTCAATAATTCCTGCAGCTTCTGAAATTCTTCTATTTCTTGTCTaGATTCTTCAGATCTCCTCTTTCTGTCTTCTTCTTGCTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: ASIIPAASEILLFLV*ILQISSFCLLLAEA Trigger: AGCTTCAGCAAGAAGAAGACAGAAAGAGGAGATCTGAAGAATCAAGACAAGAAATAGAAGAATTTCAGAAGCTGCAGGAATTATTGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368573.5 |
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| CDS GCA 72 bp | TGCTTATGTTTTAAATTTCCCATAGATTTCCGAAGTTaGTTGAGACTGCTAGCCTCTATGTCTTGCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: CLCFKFPIDFRS*LRLLASMSCFN Trigger: ATTAAAGCAAGACATAGAGGCTAGCAGTCTCAAGCAACTTCGGAAATCTATGGGAAATTTAAAACATAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368576.8 ENST00000485498.1 |
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| CDS GCA 72 bp | AACAAAGTATTGTTCTCAATCACTGAAATGCTTAAATaGTTGATTCTTCAAGGAATCTTCTCGGCTGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: NKVLFSITEMLK*LILQGIFSAVK Trigger: CTTTACAGCCGAGAAGATTCCTTGAAGAATCAAGCATTTAAGCATTTCAGTGATTGAGAACAATACTTTGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368576.8 ENST00000485498.1 |
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| CDS CAA 72 bp | ATACTTGAATTAACTTCCATTCCACACTGTAGGGTGTaGTCTTTCTTGTTATCTGAAGTTCCATATTGTACT | + |
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Preference number: 6 (lower is better) Translates to: ILELTSIPHCRV*SFLLSEVPYCT Trigger: AGTACAATATGGAACTTCAGATAACAAGAAAGACAACACCCTACAGTGTGGAATGGAAGTTAATTCAAGTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368573.5 ENST00000368576.8 |
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| CDS CAA 72 bp | AAAGTATTGTTCTCAATCACTGAAATGCTTAAATGCTaGATTCTTCAAGGAATCTTCTCGGCTGTAAAGACT | + |
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Preference number: 6 (lower is better) Translates to: KVLFSITEMLKC*ILQGIFSAVKT Trigger: AGTCTTTACAGCCGAGAAGATTCCTTGAAGAATCAAGCATTTAAGCATTTCAGTGATTGAGAACAATACTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368576.8 ENST00000485498.1 |
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