RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSWIM9 (Homo sapiens)

Ensembl gene IDs: ENSG00000185453

Ensembl transcript IDs: ENST00000328759.11, ENST00000593921.1, ENST00000614654.2

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGGGGACTGCAACGGTCTCCTTGGCCTCAGCCCTATTATCTTTaGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: PGGLQRSPWPQPYYL*DRRMPSDPPGGGWW
Trigger: CCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAGTCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR TCA 90 bp AGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATaGGGAGGTCCCTGGATGACCCAGAAGGTGGCCAGGGGGACTGCA +
Preference number: 1 (lower is better)
Translates to: RPLTACPWTQRGKLP*GGPWMTQKVARGTA
Trigger: TGCAGTCCCCCTGGCCACCTTCTGGGTCATCCAGGGACCTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR GCA 90 bp CCTTCCTTCTGTCCCAGCCTGACCCTGTCTACACCTCTCATCACATaGTTCCTCTCCAGAGGGAAGCCCTCAGAATCCACCCTGCCCATC +
Preference number: 1 (lower is better)
Translates to: PSFCPSLTLSTPLIT*FLSRGKPSESTLPI
Trigger: GATGGGCAGGGTGGATTCTGAGGGCTTCCCTCTGGAGAGGAAGCATGTGATGAGAGGTGTAGACAGGGTCAGGCTGGGACAGAAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR GCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTTCTCCTGACCCCCAGTaGCCGCCCTCCCTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSSPDPQ*PPSLSL
Trigger: AAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR-3UTR GCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGTTTGGGATCGAAGAATaGCCTCCGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSFGIEE*PPTLLV
Trigger: CACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAA...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR GCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATGGTGGCCAGGGGGACTaGAACGGTCTCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LPAALPRLASLLLPDTPHGGQGD*NGLLGL
Trigger: GAGGCCAAGGAGACCGTTGCAGTCCCCCTGGCCACC...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR TCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAGAGGAGGTCCCTGGATaGCCCAGAAGGTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQEEVPG*PRRWPG
Trigger: CCCTGGCCACCTTCTGGGTCATCCAGGGACCTCCTC...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCCCCAGAGAGGCAAACTaGCATGAGGAGGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: PRLASLLLPDTPHMIASSPREAN*HEEVPG
Trigger: TCCAGGGACCTCCTCATGGCAGTTTGCCTCTCTGGG...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR CCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGACTGCAACGGTCTCCTTaGCCTCAGCCCTATTATCTT +
Preference number: 2 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGLQRSP*PQPYYL
Trigger: AAGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAG...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR GCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGTCTCCTGACCCCCAGTaGCCGCCCTCCCTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: FIPILKNNSPNNSPPLLESPDPQ*PPSLSL
Trigger: AAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR-3UTR TCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCCTTCTGTCCCAGCCTaGCCCTGTCTACACCTCTCA +
Preference number: 2 (lower is better)
Translates to: FIPILKNNSPNNSPPLLEPSVPA*PCLHLS
Trigger: TGAGAGGTGTAGACAGGGTCAGGCTGGGACAGAAGG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR GCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCGTCCCTTCCTCTCCTaGTTCCCCCAGCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FIPILKNNSPNNSPPLLERPFLS*FPQLFL
Trigger: GAGGAAAAGCTGGGGGAAGCAGGAGAGGAAGGGACG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR-3UTR CCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACAGCCCTATTATCTTTaGGATCGAAGAATGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQQPYYL*DRRMPS
Trigger: GGAGGGCATTCTTCGATCCCAAAGATAATAGGGCTG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR TCA 72 bp ACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATaGGGAGGTCCCTGGATGACCCAGAAGGTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: TACPWTQRGKLP*GGPWMTQKVAR
Trigger: CCTGGCCACCTTCTGGGTCATCCAGGGACCTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR CAA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAGACCACTTACAGCTaGCCCTTGGACCCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGETTYS*PLDPER
Trigger: CCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTC...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR CCA 72 bp CCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATaGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCA +
Preference number: 3 (lower is better)
Translates to: PSARPPSLFRRR*GSMSPGLGEKP
Trigger: TGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR CCA 72 bp CTGCAACGGTCTCCTTGGCCTCAGCCCTATTATCTTTaGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: LQRSPWPQPYYL*DRRMPSDPPGG
Trigger: TCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR CCA 72 bp AGAATCCACCCTGCCCATCAACACCTTCCCAAGCTGTaGCTCCAGGACCTCAGAGACCACTTACAGCTTGCC +
Preference number: 3 (lower is better)
Translates to: RIHPAHQHLPKL*LQDLRDHLQLA
Trigger: GGCAAGCTGTAAGTGGTCTCTGAGGTCCTGGAGCCACAGCTTGGGAAGGTGTTGATGGGCAGGGTGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR CAA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAACCAAAACCACGCCCCTaGCATTTCGTCTCTACCCGT +
Preference number: 3 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKPKPRP*HFVSTR
Trigger: ACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGG...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR-3UTR CAA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAATTTCTGTCTCTTTGCTaGTCCTCTCTCCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGEFLSLC*SSLLHF
Trigger: GAAATGGAGGAGAGAGGACAAGCAAAGAGACAGAAA...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR-3UTR CAA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGACTTACAGCTTGCCCTaGGACCCAGAGAGGCAAACT +
Preference number: 3 (lower is better)
Translates to: FIPILKNNSPNNSPPLLETYSLP*DPERQT
Trigger: AGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGT...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR-3UTR CAA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGTTTCTGTCTCTTTGCTaGTCCTCTCTCCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: FIPILKNNSPNNSPPLLEFLSLC*SSLLHF
Trigger: GAAATGGAGGAGAGAGGACAAGCAAAGAGACAGAAA...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGAAGGCGGCTGGGCCGTaGGCGTGGAGCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSKAAGP*AWSSAS
Trigger: GCTGGCCGAGCTCCACGCCCACGGCCCAGCCGCCTT...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGTCCGGCTCGGCTCTTaGGGCCCACGGACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVVRLGS*GPRTGL
Trigger: GAGCCCGGTCCGTGGGCCCCAAGAGCCGAGCCGGAC...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGGCGGCCCTTGACGTCTaGCGCGCTCTGCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSAALDV*RALQQR
Trigger: TCGCTGCTGCAGAGCGCGCCAGACGTCAAGGGCCGC...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCGGGCAGGCCGGGTGTaGGTGGGTCAGCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSRAGRV*VGQLAL
Trigger: GAGTGCCAGCTGACCCACTCACACCCGGCCTGCCCG...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTAGCTCCTGCTCCTCCTaGCCCGCAGCCGTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSSSCSS*PAAVPG
Trigger: ACCCGGCACGGCTGCGGGGCAGGAGGAGCAGGAGCT...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTAGGCCCTCGAGCACGTaGAGGGCGTCCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSRPSST*RASRTP
Trigger: CGGCGTCCTGGACGCCCTGCACGTGCTCGAGGGCCT...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCAGCGTCTCCAGGCCCTaGGCGCGGCAGATCTGCACG +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVSVSRP*ARQICT
Trigger: CGTGCAGATCTGCCGCGCGCAGGGCCTGGAGACGCT...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCAGGCCGGGTGTGAGTaGGTCAGCTGGCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSQAGCE*VSWHSV
Trigger: GACGGAGTGCCAGCTGACCCACTCACACCCGGCCTG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCGCCACGCGAGGGGCTaGGACGACGCAGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLERHARG*DDAAVA
Trigger: GGCGACTGCTGCGTCGTCTCAGCCCCTCGCGTGGCG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCGGCAGCGCGCCAGGTaGATGGAGCTCTTGACGAAG +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSRQRAR*MELLTK
Trigger: CTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAGATCCAGCGCGCCCTaGAGCCCCGGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLERSSAP*SPGSRS
Trigger: GGACCGGCTGCCGGGGCTGCAGGGCGCGCTGGATCT...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCAGCAGCTGGCGCACTaGAGGCAACTGCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSQQLAH*RQLRRH
Trigger: GTGGCGGCGCAGTTGCCTGCAGTGCGCCAGCTGCTG...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGACGCCTCGTCGTAGGCTaGGGGCGACGACGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGRLVVG*GRRRAS
Trigger: GCTGGCGCGTCGTCGCCCGCAGCCTACGACGAGGCG...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCCAGGCCGGGTGTGAGTaGGTCAGCTGGCACTCCGTC +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVQAGCE*VSWHSV
Trigger: GACGGAGTGCCAGCTGACCCACTCACACCCGGCCTG...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCGTCGGCCCACTGCATaGCCACCAGGTCGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSRRPTA*PPGREG
Trigger: GCCTTCGCGACCTGGTGGCCATGCAGTGGGCCGACG...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGGGTGCATGGAGCTCTTaGCGAAGAAGAGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSGAWSS*RRRAPA
Trigger: GGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACC...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGACGGGCAGGCCGGGTGTaGGTGGGTCAGCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGRAGRV*VGQLAL
Trigger: GAGTGCCAGCTGACCCACTCACACCCGGCCTGCCCG...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTAAGAGCGCCAGCCGCTaGTGGCACCACGCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSKSASR*WHHASK
Trigger: CTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTT...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAACGTCTGGCGCGCTCTaGAGCAGCGACGCGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGTSGAL*SSDASA
Trigger: CGCGCTCGCGTCGCTGCTGCAGAGCGCGCCAGACGT...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAAGGTCGCGAAGGCACTaGGCCACGCCACGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGRSRRH*ATPREG
Trigger: CCCCTCGCGTGGCGTGGCGCAGTGCCTTCGCGACCT...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCTGCAGGCCGTCACCTaGAGCCAGGTGTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSLQAVT*SQVFTP
Trigger: AGGAGTGAACACCTGGCTGCAGGTGACGGCCTGCAG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCATTCTCCATGCCTGTaGCCCTCGTGTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSHSPCL*PSCLPA
Trigger: AGCTGGGAGACACGAGGGTCACAGGCATGGAGAATG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCAGATCTTGTTGGTGGTaGGCACCGGCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVRSCWW*APAGRR
Trigger: ACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCT...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGGGCAAGGCCCTCGAGCACGTaGAGGGCGTCCAGGACGCCG +
Preference number: 4 (lower is better)
Translates to: YLWDRRMPSDPPGGGWWARPSST*RASRTP
Trigger: CGGCGTCCTGGACGCCCTGCACGTGCTCGAGGGCCT...TGCCCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGCGCACTGCAGGCAACTaGGCCGCCACCTCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALLSLGSKNALRPSWWRVRTAGN*AATSGP
Trigger: CGGGCCCGAGGTGGCGGCGCAGTTGCCTGCAGTGCG...CACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCAGCAGCTGGCGCACTaGAGGCAACTGCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEQQLAH*RQLRRH
Trigger: GTGGCGGCGCAGTTGCCTGCAGTGCGCCAGCTGCTG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAATGCGCGCGGCAGATCTaGACGCGCGCGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGECARQI*TRAQGS
Trigger: GCTGCCCTGCGCGCGCGTGCAGATCTGCCGCGCGCA...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCGGCGCACGTCGGCTaGGGCCACGAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGAAHVG*GHELLG
Trigger: TCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGC...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCTGCGATCTTCCAGCTaGGCCACCCTCCAGGTATAC +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSLRSSS*ATLQVY
Trigger: GTATACCTGGAGGGTGGCCCAGCTGGAAGATCGCAG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCGCCGCTGCCCATTCTaGGCTGCCTTCCAATACAGT +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSRRCPF*AAFQYS
Trigger: ACTGTATTGGAAGGCAGCCCAGAATGGGCAGCGGCG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCGGGCGGCGTGAATTaGGCAGCTGCAGCGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGAGGVN*AAAACQ
Trigger: CTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGC...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTATAAGGCAGCCCCAGTaGGGAGGCGCGCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSIRQPQ*GGALQR
Trigger: TCTTTGCAGCGCGCCTCCTCACTGGGGCTGCCTTAT...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGGGTCCACCAGCAGCATaGGAGGGAAGCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEGPPAA*EGSAAA
Trigger: TGCTGCGGCGCTTCCCTCGCATGCTGCTGGTGGACC...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATGGTCCACCAGCAGCATaGGAGGGAAGCGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLLLPDTPHGPPAA*EGSAAA
Trigger: TGCTGCGGCGCTTCCCTCGCATGCTGCTGGTGGACC...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTTGGAGATCTTGTTGGTaGTGCGCACCGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSWRSCW*CAPAGR
Trigger: CCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCA...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTGTCTCCACCACAGCCTaGTCCTCCACGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSVSTTA*SSTNTS
Trigger: GCTGGTGTTCGTGGAGGACCAGGCTGTGGTGGAGAC...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCTTCTCACCCTCCAACTaGGGCCCCCTCCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVFSPSN*GPLQSL
Trigger: TAGAGACTGGAGGGGGCCCCAGTTGGAGGGTGAGAA...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCTCCCCCTCAGGTCGGTaGTACTCCTGCGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVSPSGR*YSCDLP
Trigger: TGGAAGATCGCAGGAGTACCACCGACCTGAGGGGGA...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCCTCTTTGGTTCCCTaGGGCCATCTTCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVASLVP*GHLRLL
Trigger: AAGGAGGCGAAGATGGCCCCAGGGAACCAAAGAGGC...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATCAGGTCTGCCAGCTCTaGCCCGCAGGCTGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLLLPDTPHQVCQL*PAGCSE
Trigger: TTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCTG...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCCAGCTCCGGTCCAGTaGAAACCCCGGGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEPAPVQ*KPRVPC
Trigger: GCATGGGACCCGGGGTTTCCACTGGACCGGAGCTGG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCAGCGCACGCGGCCCTTaGCGTCTGGCGCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSSARGP*RLARSA
Trigger: TGCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCT...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp TATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGGGCAAGACGGCGGGCGGCGTaGATTGAGCAGCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YLWDRRMPSDPPGGGWWARRRAA*IEQLQR
Trigger: ACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCT...TGCCCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGGCAGCAGCGCCCTGGTaGGCGACGTCAGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEAAAPW*ATSGRT
Trigger: TGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGC...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCAGCAGCGCCCTGGTaGGCGACGTCAGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGAAAPW*ATSGRT
Trigger: TGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGC...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAAGATCCAGCGCGCCCTaGAGCCCCGGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKRSSAP*SPGSRS
Trigger: GGACCGGCTGCCGGGGCTGCAGGGCGCGCTGGATCT...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAGCGTCTCCAGGCCCTaGGCGCGGCAGATCTGCACG +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGESVSRP*ARQICT
Trigger: CGTGCAGATCTGCCGCGCGCAGGGCCTGGAGACGCT...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATGGCGGGGCTCCCAGTTaGGCTCGAAGTAGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLLLPDTPHGGAPS*ARSSPR
Trigger: TCGTGGACTACTTCGAGCGCAACTGGGAGCCCCGCC...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCTTTGGGATCGAAGAATaGCCTCCGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVFGIEE*PPTLLV
Trigger: CACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAA...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAGCCGCAGCAGCGCCCTaGTGCGCGACGTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGEAAAAP*CATSGR
Trigger: TCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGC...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAAGCGCACGCGGCCCTTaGCGTCTGGCGCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKSARGP*RLARSA
Trigger: TGCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCT...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAAGCTCCTGCTCCTCCTaGCCCGCAGCCGTGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKSSCSS*PAAVPG
Trigger: ACCCGGCACGGCTGCGGGGCAGGAGGAGCAGGAGCT...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCCGTGGTCGCGGCCCTTaGAGTAGGACAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSRGRGP*SRTAGG
Trigger: GCCGCCTGCTGTCCTACTGCAAGGGCCGCGACCACG...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCACGCACTGCAGGCAACTaGGCCGCCACCTCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSRTAGN*AATSGP
Trigger: CGGGCCCGAGGTGGCGGCGCAGTTGCCTGCAGTGCG...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAATGCGCGCGGCAGATCTaGACGCGCGCGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQCARQI*TRAQGS
Trigger: GCTGCCCTGCGCGCGCGTGCAGATCTGCCGCGCGCA...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCCTCCAATCTCTGATCTaGAGTGCCCTCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVLQSLI*SALPFS
Trigger: TGAGAAGGGGAGGGCACTGCAGATCAGAGATTGGAG...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGTTCACTCCTCGCCGCTaGCCATTCTGGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEFTPRR*PFWAAF
Trigger: GAAGGCAGCCCAGAATGGGCAGCGGCGAGGAGTGAA...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGATGTGAGTGGGTCAGCTaGCACTCCGTCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGCEWVS*HSVTTR
Trigger: CCTCGTGGTGACGGAGTGCCAGCTGACCCACTCACA...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGCACTCCTTCTCCATCTaGGCTCCCCTCCAAATACTT +
Preference number: 4 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSHSFSI*APLQIL
Trigger: AAGTATTTGGAGGGGAGCCCAGATGGAGAAGGAGTG...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
3UTR CAA 72 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTaGCCAGACACTCCCCATATGATCGCTTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLL*PDTPHMIASSP
Trigger: GGGGGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTCGCCACGCGAGGGGCTaGGACGACGCAGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISRHARG*DDAAVA
Trigger: GGCGACTGCTGCGTCGTCTCAGCCCCTCGCGTGGCG...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp TATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGGGCAAGTCCCCTCGGCTTCTaGTTCTCCAACCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: YLWDRRMPSDPPGGGWWASPLGF*FSNRPP
Trigger: AGGGGGTCGGTTGGAGAATCAGAAGCCGAGGGGACT...TGCCCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATAGAGGCAAACTGCCATaGGGAGGTCCCTGGATGACC +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLLLPDTPHRGKLP*GGPWMT
Trigger: GGTCATCCAGGGACCTCCTCATGGCAGTTTGCCTCT...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCAAGAGCGCCAGCCGCTaGTGGCACCACGCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSKSASR*WHHASK
Trigger: CTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTT...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAGCCGCGTCGGCCCACTaGATGGCCACCAGGTCGCGA +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQAASAH*MATRSR
Trigger: TCGCGACCTGGTGGCCATGCAGTGGGCCGACGCGGC...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAACAGTCCCCACCGGGGTaGCAGACACGACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGEQSPPG*QTRLHS
Trigger: GGAATGGAGTCGTGTCTGGCACCCCGGTGGGGACTG...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGGGTGGCCAGGGGGACTaGAACGGTCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEEGGQGD*NGLLGL
Trigger: GAGGCCAAGGAGACCGTTGCAGTCCCCCTGGCCACC...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAGCGGCGCACGTCGGCTaGGGCCACGAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKAAHVG*GHELLG
Trigger: TCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGC...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCAAGGCGGCTGGGCCGTaGGCGTGGAGCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLIKAAGP*AWSSAS
Trigger: GCTGGCCGAGCTCCACGCCCACGGCCCAGCCGCCTT...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAAGGCTGCTCGGAATTTaGCCAGGGGTTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGRLLGI*PGVPSP
Trigger: TGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCT...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR CAA 72 bp GGCTCCAGGACCTCAGAGACCACTTACAGCTTGCCCTaGGACCCAGAGAGGCAAACTGCCATGAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSRTSETTYSLP*DPERQTAMRRS
Trigger: GGACCTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCTGAGGTCCTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAGTCCCCTCGGCTTCTaGTTCTCCAACCGACCCCCT +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGESPLGF*FSNRPP
Trigger: AGGGGGTCGGTTGGAGAATCAGAAGCCGAGGGGACT...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp TATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGGGCACCTTCTGTCCCAGCCTaGCCCTGTCTACACCTCTCA +
Preference number: 4 (lower is better)
Translates to: YLWDRRMPSDPPGGGWWAPSVPA*PCLHLS
Trigger: TGAGAGGTGTAGACAGGGTCAGGCTGGGACAGAAGG...TGCCCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAATGGCCTCGGGGTCGGTaGGGAAGAGGCCCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQWPRGR*GRGPRA
Trigger: TGCTCGAGGGCCTCTTCCGCACCGACCCCGAGGCCA...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTAGGTCGCGAAGGCACTaGGCCACGCCACGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISRSRRH*ATPREG
Trigger: CCCCTCGCGTGGCGTGGCGCAGTGCCTTCGCGACCT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTGCCGCGTCGGCCCACTaGATGGCCACCAGGTCGCGA +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISAASAH*MATRSR
Trigger: TCGCGACCTGGTGGCCATGCAGTGGGCCGACGCGGC...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGGTCGGTGGTACTCCTaGGATCTTCCAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALLSLGSKNALRPSWWRVGRWYS*DLPAGP
Trigger: TGGCCCAGCTGGAAGATCGCAGGAGTACCACCGACC...CACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCTCTTCGCCTCCTTCCTaGAGGCCGTCACCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSSSPPS*RPSPAA
Trigger: GGCTGCAGGTGACGGCCTGCAGGAAGGAGGCGAAGA...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGCCCCGGGTCCCATGCTaGCTAGCAAAGGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEEPRVPC*LAKANS
Trigger: GGAGTTGGCCTTTGCTAGGCAGCATGGGACCCGGGG...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAACTGCAAAGAGGTGTCTaGAGGGCAGACGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKLQRGV*RADGGR
Trigger: CCGCCCGCCGTCTGCCCTGCAGACACCTCTTTGCAG...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp GCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGCTTGGAGATCTTGTTaGTGGTGCGCACCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALLSLGSKNALRPSWWRVAWRSC*WCAPAG
Trigger: GCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGC...CACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCAGCCGCAGCAGCGCCCTaGTGCGCGACGTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSAAAAP*CATSGR
Trigger: TCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGC...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTAGCAGTCGCCGGCGGTaGCCTCGCACCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISSSRRR*PRTRAH
Trigger: GTGTGCCCTGGTGCGAGGCCACCGCCGGCGACTGCT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAAGCAGTCGCCGGCGGTaGCCTCGCACCAGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKSSRRR*PRTRAH
Trigger: GTGTGCCCTGGTGCGAGGCCACCGCCGGCGACTGCT...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGACTCTTCAGAAGGCGATaGGGGTCGATGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGLFRRR*GSMSPG
Trigger: ACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR TCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGCGTCGAAGAAGCGGCTaGACTCGGCCCACGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEERRRSG*TRPTRR
Trigger: TCTTCTCGTGGGCCGAGTTCAGCCGCTTCTTCGACG...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCAGAGGAGGTCCCTGGATaGCCCAGAAGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSEEVPG*PRRWPG
Trigger: CCCTGGCCACCTTCTGGGTCATCCAGGGACCTCCTC...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCCGTGGTCGCGGCCCTTaGAGTAGGACAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLIRGRGP*SRTAGG
Trigger: GCCGCCTGCTGTCCTACTGCAAGGGCCGCGACCACG...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAATGGCCTCGGGGTCGGTaGGGAAGAGGCCCTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKWPRGR*GRGPRA
Trigger: TGCTCGAGGGCCTCTTCCGCACCGACCCCGAGGCCA...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGTCTGGCCCTCTCAGGTaGCCTTTCTCTAACTTCGAC +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLESGPLR*PFSNFD
Trigger: GTCGAAGTTAGAGAAAGGGCACCTGAGAGGGCCAGA...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCACTCTGGCCCGCAGGCTaGTCGGAATTTGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSLWPAG*SEFGQG
Trigger: CCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAG...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AGCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTAGTGAGGAGGCGCGCTaGAAAGAGGTGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPIIFGIEECPPTLLVEGSEEAR*KEVSAG
Trigger: CCCTGCAGACACCTCTTTGCAGCGCGCCTCCTCACT...ACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAACCCAGAGAGGCAAACTaGCATGAGGAGGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGEPREAN*HEEVPG
Trigger: TCCAGGGACCTCCTCATGGCAGTTTGCCTCTCTGGG...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAACGCGTCCAGGTCTCTaGCCGCCTCGAAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKTRPGL*PPRRRG
Trigger: TCCGCGCCTTCGAGGCGGCCAGAGACCTGGACGCGT...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCCGTCGGCCCACTGCATaGCCACCAGGTCGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLIRRPTA*PPGREG
Trigger: GCCTTCGCGACCTGGTGGCCATGCAGTGGGCCGACG...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACCCCGCCCCAGTCTCTaGTTTCCAGTGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQPRPSL*FPVPLP
Trigger: GGGCAAGGGCACTGGAAACCAGAGACTGGGGCGGGG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp GCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGTCCCCCTCAGGTCGGTaGTACTCCTGCGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALLSLGSKNALRPSWWRVSPSGR*YSCDLP
Trigger: TGGAAGATCGCAGGAGTACCACCGACCTGAGGGGGA...CACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAGCTCCTGCGCCTTGCTaGAGAGCGTCTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKAPAPC*RASPGP
Trigger: AGGGCCTGGAGACGCTCTTCAGCAAGGCGCAGGAGC...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCGCCTCGTCGTAGGCTaGGGGCGACGACGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLERLVVG*GRRRAS
Trigger: GCTGGCGCGTCGTCGCCCGCAGCCTACGACGAGGCG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGCGTCCCTTCCTCTCCTaGTTCCCCCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEERPFLS*FPQLFL
Trigger: GAGGAAAAGCTGGGGGAAGCAGGAGAGGAAGGGACG...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCTCCTGACCCCCAGTaGCCGCCCTCCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSSPDPQ*PPSLSL
Trigger: AAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCAAACCCCGGGTCCCATaGTGCCTAGCAAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSKPRVP*CLAKAN
Trigger: GTTGGCCTTTGCTAGGCAGCATGGGACCCGGGGTTT...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAAGCGCCAGCCGCTGCTaGCACCACGCGTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKSASRC*HHASKK
Trigger: CTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCT...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAGCTTGGAGATCTTGTTaGTGGTGCGCACCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKAWRSC*WCAPAG
Trigger: GCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGC...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAACTGAGCAGGTCCATGTaGAATAAGGCAGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PPSLFRRRWGSMSPGLGELSRSM*NKAAPV
Trigger: CACTGGGGCTGCCTTATTCCACATGGACCTGCTCAG...TTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCTGCAACGGTCTCCTTaGCCTCAGCCCTATTATCTT +
Preference number: 4 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLELQRSP*PQPYYL
Trigger: AAGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp TATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGGTGGGCACTTACAGCTTGCCCTTaGACCCAGAGAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: YLWDRRMPSDPPGGGWWALTACP*TQRGKL
Trigger: CAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAG...TGCCCACCACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR CAA 72 bp ACTGCAACGGTCTCCTTGGCCTCAGCCCTATTATCTTaGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TATVSLASALLS*GSKNALRPSWW
Trigger: CCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACGTCGAAGAAGCGGCTaGACTCGGCCCACGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQRRRSG*TRPTRR
Trigger: TCTTCTCGTGGGCCGAGTTCAGCCGCTTCTTCGACG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTGGCGGGGCTCCCAGTTaGGCTCGAAGTAGTCCACGA +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISGGAPS*ARSSPR
Trigger: TCGTGGACTACTTCGAGCGCAACTGGGAGCCCCGCC...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAACGTCCCTTCCTCTCCTaGTTCCCCCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKRPFLS*FPQLFL
Trigger: GAGGAAAAGCTGGGGGAAGCAGGAGAGGAAGGGACG...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp AGCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTAGTTCTCAGTCCCCCTaGCCTTTCATCGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPIIFGIEECPPTLLVEGSSQSP*PFIVQL
Trigger: CAGCTGCACGATGAAAGGGCAGGGGGACTGAGAACT...ACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AGCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTCTGCCCATTCTGGGCTaGCTTCCAATACAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPIIFGIEECPPTLLVEGLPILG*LPIQSP
Trigger: TGGGGACTGTATTGGAAGGCAGCCCAGAATGGGCAG...ACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAATGTGAGTGGGTCAGCTaGCACTCCGTCACCACGAGG +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQCEWVS*HSVTTR
Trigger: CCTCGTGGTGACGGAGTGCCAGCTGACCCACTCACA...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAACACCAGCTTCACCTTaGCCTCGGGGTCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKTPASP*PRGRCG
Trigger: TCCGCACCGACCCCGAGGCCAAGGTGAAGCTGGTGT...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTACACCAGCTTCACCTTaGCCTCGGGGTCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISTPASP*PRGRCG
Trigger: TCCGCACCGACCCCGAGGCCAAGGTGAAGCTGGTGT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAAATCCTCTTAGCGCCTaGTCCTCCAACTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKNPLSA*SSNWDP
Trigger: GGGGTCCCAGTTGGAGGACCAGGCGCTAAGAGGATT...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp GCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCCTCTTCAGAAGGCGATaGGGGTCGATGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AALPRLASLLLPDTPHMILFRRR*GSMSPG
Trigger: ACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG...GATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGTCGGCAAAGCCTCTTTaGTTCCCTGGGGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEESAKPL*FPGAIF
Trigger: GAAGATGGCCCCAGGGAACCAAAGAGGCTTTGCCGA...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAATCCCCCAGCAATCCCTaGGCAGGTCCATGTGGAATA +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKSPSNP*AGPCGI
Trigger: TATTCCACATGGACCTGCTCAGGGATTGCTGGGGGA...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACAGACACTCCCCATATaGTCGCTTCCTCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKQTLPI*SLPPPP
Trigger: GGGAGGGGGAGGAAGCGATCATATGGGGAGTGTCTG...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTAGATCTTGTTGGTGGTaGGCACCGGCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISRSCWW*APAGRR
Trigger: ACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCTCTGGCCCTCTCAGGTaGCCTTTCTCTAACTTCGAC +
Preference number: 4 (lower is better)
Translates to: PRLASLLLPDTPHMIASSSGPLR*PFSNFD
Trigger: GTCGAAGTTAGAGAAAGGGCACCTGAGAGGGCCAGA...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAGGTCGGTGGTACTCCTaGGATCTTCCAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKGRWYS*DLPAGP
Trigger: TGGCCCAGCTGGAAGATCGCAGGAGTACCACCGACC...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp GCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCCAAAACCACGCCCCTTaGATTTCGTCTCTACCCGTC +
Preference number: 4 (lower is better)
Translates to: AALPRLASLLLPDTPHMIQNHAP*ISSLPV
Trigger: GACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTG...GATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGCCTCAGAATCCACCCTaGCCATCAACACCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEEPQNPP*PSTPSQ
Trigger: TTGGGAAGGTGTTGATGGGCAGGGTGGATTCTGAGG...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAATGGAGATCTTGTTGGTaGTGCGCACCGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKWRSCW*CAPAGR
Trigger: CCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCA...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGACGCGTCCAGGTCTCTaGCCGCCTCGAAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLETRPGL*PPRRRG
Trigger: TCCGCGCCTTCGAGGCGGCCAGAGACCTGGACGCGT...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAATCCTCTTAGCGCCTaGTCCTCCAACTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQNPLSA*SSNWDP
Trigger: GGGGTCCCAGTTGGAGGACCAGGCGCTAAGAGGATT...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCCCCGCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATGATGTCTCCAGGTCTTaGAGAAAAACCAAAACCACG +
Preference number: 4 (lower is better)
Translates to: LPAALPRLASLLLPDTPHDVSRS*RKTKTT
Trigger: CGTGGTTTTGGTTTTTCTCCAAGACCTGGAGACATC...ATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGCGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCACACCTTCCCAAGCTGTaGCTCCAGGACCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSHLPKL*LQDLRD
Trigger: GTCTCTGAGGTCCTGGAGCCACAGCTTGGGAAGGTG...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGGCTCCTGCGCCTTGCTaGAGAGCGTCTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLEAPAPC*RASPGP
Trigger: AGGGCCTGGAGACGCTCTTCAGCAAGGCGCAGGAGC...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCTTCTCACCCTCCAACTaGGGCCCCCTCCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLIFSPSN*GPLQSL
Trigger: TAGAGACTGGAGGGGGCCCCAGTTGGAGGGTGAGAA...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACTGCGATCTTCCAGCTaGGCCACCCTCCAGGTATAC +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKLRSSS*ATLQVY
Trigger: GTATACCTGGAGGGTGGCCCAGCTGGAAGATCGCAG...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACAAAACCACGCCCCTTaGATTTCGTCTCTACCCGTC +
Preference number: 4 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQQNHAP*ISSLPV
Trigger: GACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAACACTCCTTCTCCATCTaGGCTCCCCTCCAAATACTT +
Preference number: 4 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKHSFSI*APLQIL
Trigger: AAGTATTTGGAGGGGAGCCCAGATGGAGAAGGAGTG...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGGAAGGGTCAGGGCTCTaGGGCTCTCCCCCAGCAATC +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLEEGSGL*GSPPAI
Trigger: GATTGCTGGGGGAGAGCCCCAGAGCCCTGACCCTTC...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp AGAGACCACTTACAGCTTGCCCTTGGACCCAGAGAGGCAAACTGCCATGAGGAGCAGCCCTATTATCTTTaGGATCGAAGAATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RDHLQLALGPREANCHEEQPYYL*DRRMPS
Trigger: GGAGGGCATTCTTCGATCCCAAAGATAATAGGGCTG...CTCCTCATGGCAGTTTGCCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTCTGCACTCCCTAGACTaGCCAGTCTACTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISLHSLD*PVYSCQ
Trigger: CTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAG...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR TCA 90 bp GCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCTTCCTTCAAGACTCCTaGCCCTCTCATAGTCAAACT +
Preference number: 4 (lower is better)
Translates to: AALPRLASLLLPDTPHMIFLQDS*PSHSQT
Trigger: AGTTTGACTATGAGAGGGTCAGGAGTCTTGAAGGAA...GATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACTCCAATCTCTGATCTaGAGTGCCCTCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKLQSLI*SALPFS
Trigger: TGAGAAGGGGAGGGCACTGCAGATCAGAGATTGGAG...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGGTCTCCACCACAGCCTaGTCCTCCACGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLEVSTTA*SSTNTS
Trigger: GCTGGTGTTCGTGGAGGACCAGGCTGTGGTGGAGAC...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTCCAGTCTCTAATCTCTaGCCCTCTCAGGTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISPVSNL*PSQVPF
Trigger: AAAGGGCACCTGAGAGGGCCAGAGATTAGAGACTGG...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACCAGTCTCTAATCTCTaGCCCTCTCAGGTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKPVSNL*PSQVPF
Trigger: AAAGGGCACCTGAGAGGGCCAGAGATTAGAGACTGG...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR GCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCGTGAATTGAGCAGCTaGAGCGTGTCAGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLERELSS*SVSGPH
Trigger: ATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR GCA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTACACCTCTCATCACATaGTTCCTCTCCAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISTPLIT*FLSRGK
Trigger: CTTCCCTCTGGAGAGGAAGCATGTGATGAGAGGTGT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CCA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAAGATGTCTCCAGGTCTTaGAGAAAAACCAAAACCACG +
Preference number: 4 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKDVSRS*RKTKTT
Trigger: CGTGGTTTTGGTTTTTCTCCAAGACCTGGAGACATC...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CCA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCTCGTGTCTCCCAGCTaGACCAGAACTATATCCTCC +
Preference number: 4 (lower is better)
Translates to: FIPILKNNSPNNSPPLLELVSPS*TRTISS
Trigger: GGAGGATATAGTTCTGGTCCAGCTGGGAGACACGAG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
3UTR CAA 72 bp TGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTaGTCTCATCTCCGATTTTTCTTCCCCCTCCTACAT +
Preference number: 4 (lower is better)
Translates to: CISSLPVSHTFL*SHLRFFFPLLH
Trigger: ATGTAGGAGGGGGAAGAAAAATCGGAGATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CGCTCTGCAGCAGCGACGCGAGCGCGAAGCGCAGCAGGCTCGGTGTaGCCGGGCGCGCCACGCAGCAGGCAGCCTGGCGCGCACGGCCCG +
Preference number: 5 (lower is better)
Translates to: RSAAATRARSAAGSV*PGAPRSRQPGAHGP
Trigger: CGGGCCGTGCGCGCCAGGCTGCCTGCTGCGTGGCGCGCCCGGGCACACCGAGCCTGCTGCGCTTCGCGCTCGCGTCGCTGCTGCAGAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp ATCTGCACGCGCGCGCAGGGCAGCAGCTGGCGCACTGCAGGCAACTaGGCCGCCACCTCGGGCCCGGCGGTGAGGCAGCGCACGCGGCCC +
Preference number: 5 (lower is better)
Translates to: ICTRAQGSSWRTAGN*AATSGPAVRQRTRP
Trigger: GGGCCGCGTGCGCTGCCTCACCGCCGGGCCCGAGGTGGCGGCGCAGTTGCCTGCAGTGCGCCAGCTGCTGCCCTGCGCGCGCGTGCAGAT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp GGCTGGGCCGTGGGCGTGGAGCTCGGCCAGCGCCTCGTCGTAGGCTaGGGGCGACGACGCGCCAGCCAGGCGGCACAGGCGCGACCACAG +
Preference number: 5 (lower is better)
Translates to: GWAVGVELGQRLVVG*GRRRASQAAQARPQ
Trigger: CTGTGGTCGCGCCTGTGCCGCCTGGCTGGCGCGTCGTCGCCCGCAGCCTACGACGAGGCGCTGGCCGAGCTCCACGCCCACGGCCCAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CCATCGGGCCCCTCGGGCACCGCCTCCCCGGCCGCGTCGGCCCACTaGATGGCCACCAGGTCGCGAAGGCACTGCGCCACGCCACGCGAG +
Preference number: 5 (lower is better)
Translates to: PSGPSGTASPAASAH*MATRSRRHCATPRE
Trigger: CTCGCGTGGCGTGGCGCAGTGCCTTCGCGACCTGGTGGCCATGCAGTGGGCCGACGCGGCCGGGGAGGCGGTGCCCGAGGGGCCCGATGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CGCAGCAGGCTCGGTGTGCCCGGGCGCGCCACGCAGCAGGCAGCCTaGCGCGCACGGCCCGAGCCGTCCACGCACAGCACGGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: RSRLGVPGRATQQAA*RARPEPSTHSTASR
Trigger: TCTGCTGGCCGTGCTGTGCGTGGACGGCTCGGGCCGTGCGCGCCAGGCTGCCTGCTGCGTGGCGCGCCCGGGCACACCGAGCCTGCTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CGGCTGAACTCGGCCCACGAGAAGAAGGCCCGCTCCCGCAGCTCCTaGTCCTCCTGCCCCGCAGCCGTGCCGGGTGGGGGCTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: RLNSAHEKKARSRSS*SSCPAAVPGGGSGR
Trigger: GCGGCCGGAGCCCCCACCCGGCACGGCTGCGGGGCAGGAGGAGCAGGAGCTGCGGGAGCGGGCCTTCTTCTCGTGGGCCGAGTTCAGCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CCGGCGGTGAGGCAGCGCACGCGGCCCTTGACGTCTGGCGCGCTCTaGAGCAGCGACGCGAGCGCGAAGCGCAGCAGGCTCGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: PAVRQRTRPLTSGAL*SSDASAKRSRLGVP
Trigger: GGGCACACCGAGCCTGCTGCGCTTCGCGCTCGCGTCGCTGCTGCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCTGCCTCACCGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CACCTCGGGCCCGGCGGTGAGGCAGCGCACGCGGCCCTTGACGTCTaGCGCGCTCTGCAGCAGCGACGCGAGCGCGAAGCGCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: HLGPGGEAAHAALDV*RALQQRREREAQQA
Trigger: AGCCTGCTGCGCTTCGCGCTCGCGTCGCTGCTGCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCTGCCTCACCGCCGGGCCCGAGGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp GTCGCCGGCGGTGGCCTCGCACCAGGGCACACGCGTCCAGGTCTCTaGCCGCCTCGAAGGCGCGGAAGCGGACCCACATGTCGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: VAGGGLAPGHTRPGL*PPRRRGSGPTCRGG
Trigger: CCCGCCGCGACATGTGGGTCCGCTTCCGCGCCTTCGAGGCGGCCAGAGACCTGGACGCGTGTGCCCTGGTGCGAGGCCACCGCCGGCGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp GCCACGCCACGCGAGGGGCTGAGACGACGCAGCAGTCGCCGGCGGTaGCCTCGCACCAGGGCACACGCGTCCAGGTCTCTGGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: ATPREGLRRRSSRRR*PRTRAHASRSLAAS
Trigger: CGAGGCGGCCAGAGACCTGGACGCGTGTGCCCTGGTGCGAGGCCACCGCCGGCGACTGCTGCGTCGTCTCAGCCCCTCGCGTGGCGTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp TGGCCACCAGGTCGCGAAGGCACTGCGCCACGCCACGCGAGGGGCTaGGACGACGCAGCAGTCGCCGGCGGTGGCCTCGCACCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: WPPGREGTAPRHARG*DDAAVAGGGLAPGH
Trigger: GTGCCCTGGTGCGAGGCCACCGCCGGCGACTGCTGCGTCGTCTCAGCCCCTCGCGTGGCGTGGCGCAGTGCCTTCGCGACCTGGTGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp GATCCAGCGCGCCCTGCAGCCCCGGCAGCCGGTCCACCAGCAGCATaGGAGGGAAGCGCCGCAGCAGCGCCCTGGTGCGCGACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: DPARPAAPAAGPPAA*EGSAAAAPWCATSG
Trigger: TCCTGACGTCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCTCGCATGCTGCTGGTGGACCGGCTGCCGGGGCTGCAGGGCGCGCTGGATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CCCGAGCCGTCCACGCACAGCACGGCCAGCAGATCCAGCGCGCCCTaGAGCCCCGGCAGCCGGTCCACCAGCAGCATGCGAGGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PEPSTHSTASRSSAP*SPGSRSTSSMRGKR
Trigger: GCGCTTCCCTCGCATGCTGCTGGTGGACCGGCTGCCGGGGCTGCAGGGCGCGCTGGATCTGCTGGCCGTGCTGTGCGTGGACGGCTCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp GCGGCGGGGCTCCCAGTTGCGCTCGAAGTAGTCCACGAAGGCGGCTaGGCCGTGGGCGTGGAGCTCGGCCAGCGCCTCGTCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AAGLPVALEVVHEGG*AVGVELGQRLVVGC
Trigger: GCAGCCTACGACGAGGCGCTGGCCGAGCTCCACGCCCACGGCCCAGCCGCCTTCGTGGACTACTTCGAGCGCAACTGGGAGCCCCGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CCTCGAGCACGTGCAGGGCGTCCAGGACGCCGTGGTCGCGGCCCTTaGAGTAGGACAGCAGGCGGCGCACGTCGGCTGGGGCCACGAACT +
Preference number: 5 (lower is better)
Translates to: PRARAGRPGRRGRGP*SRTAGGARRLGPRT
Trigger: AGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGCTGTCCTACTGCAAGGGCCGCGACCACGGCGTCCTGGACGCCCTGCACGTGCTCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp GCCCGGGCGGAAGTAGTAGGCGAACTCCAGCGGGCAGGCCGGGTGTaGGTGGGTCAGCTGGCACTCCGTCACCACGAGGCGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: ARAEVVGELQRAGRV*VGQLALRHHEAVPQ
Trigger: CTGCGGGACCGCCTCGTGGTGACGGAGTGCCAGCTGACCCACTCACACCCGGCCTGCCCGCTGGAGTTCGCCTACTACTTCCGCCCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp TGCGCCTTGCTGAAGAGCGTCTCCAGGCCCTGCGCGCGGCAGATCTaGACGCGCGCGCAGGGCAGCAGCTGGCGCACTGCAGGCAACTGC +
Preference number: 5 (lower is better)
Translates to: CALLKSVSRPCARQI*TRAQGSSWRTAGNC
Trigger: GCAGTTGCCTGCAGTGCGCCAGCTGCTGCCCTGCGCGCGCGTGCAGATCTGCCGCGCGCAGGGCCTGGAGACGCTCTTCAGCAAGGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp GGGGCGCACTGGCCCAGCGGCAGCGCGCCAGGTGCATGGAGCTCTTaGCGAAGAAGAGCGCCAGCCGCTGCTGGCACCACGCGTCGAAGA +
Preference number: 5 (lower is better)
Translates to: GAHWPSGSAPGAWSS*RRRAPAAAGTTRRR
Trigger: TCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCAGTGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp GCACGTCGGCTGGGGCCACGAACTGCTTGGAGATCTTGTTGGTGGTaGGCACCGGCAGGCAGGCGTTGGCCAGCAGGTGGCCCGGGCGGA +
Preference number: 5 (lower is better)
Translates to: ARRLGPRTAWRSCWW*APAGRRWPAGGPGG
Trigger: TCCGCCCGGGCCACCTGCTGGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CAGCCACCAGGTCTGCCAGCTCTGGCCCGCAGGCTGCTCGGAATTTaGCCAGGGGTTCCCAGTCCACCTCCTCCTCTCCCGGGGGTCGGC +
Preference number: 5 (lower is better)
Translates to: QPPGLPALARRLLGI*PGVPSPPPPLPGVG
Trigger: GCCGACCCCCGGGAGAGGAGGAGGTGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCTGGTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 90 bp GCCGGTCCACCAGCAGCATGCGAGGGAAGCGCCGCAGCAGCGCCCTaGTGCGCGACGTCAGGAAGAACACCGTCTCCACCACAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: AGPPAACEGSAAAAP*CATSGRTPSPPQPG
Trigger: ACCAGGCTGTGGTGGAGACGGTGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCTCGCATGCTGCTGGTGGACCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp AGAAGAGCGCCAGCCGCTGCTGGCACCACGCGTCGAAGAAGCGGCTaGACTCGGCCCACGAGAAGAAGGCCCGCTCCCGCAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RRAPAAAGTTRRRSG*TRPTRRRPAPAAPA
Trigger: AGCAGGAGCTGCGGGAGCGGGCCTTCTTCTCGTGGGCCGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp GGTCCACCAGCAGCATGCGAGGGAAGCGCCGCAGCAGCGCCCTGGTaGGCGACGTCAGGAAGAACACCGTCTCCACCACAGCCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GPPAACEGSAAAAPW*ATSGRTPSPPQPGP
Trigger: AGGACCAGGCTGTGGTGGAGACGGTGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCTCGCATGCTGCTGGTGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp GTGGTCGCGGCCCTTGCAGTAGGACAGCAGGCGGCGCACGTCGGCTaGGGCCACGAACTGCTTGGAGATCTTGTTGGTGGTGCGCACCGG +
Preference number: 5 (lower is better)
Translates to: VVAALAVGQQAAHVG*GHELLGDLVGGAHR
Trigger: CCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGCTGTCCTACTGCAAGGGCCGCGACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 90 bp CGCGCCAGGTGCATGGAGCTCTTGACGAAGAAGAGCGCCAGCCGCTaGTGGCACCACGCGTCGAAGAAGCGGCTGAACTCGGCCCACGAG +
Preference number: 5 (lower is better)
Translates to: RARCMELLTKKSASR*WHHASKKRLNSAHE
Trigger: CTCGTGGGCCGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp AGTAGGACAGCAGGCGGCGCACGTCGGCTGGGGCCACGAACTGCTTaGAGATCTTGTTGGTGGTGCGCACCGGCAGGCAGGCGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: SRTAGGARRLGPRTA*RSCWWCAPAGRRWP
Trigger: TGGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGCTGTCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CCACCTCCTCCTCTCCCGGGGGTCGGCAAAGCCTCTTTGGTTCCCTaGGGCCATCTTCGCCTCCTTCCTGCAGGCCGTCACCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PPPPLPGVGKASLVP*GHLRLLPAGRHLQP
Trigger: TGGCTGCAGGTGACGGCCTGCAGGAAGGAGGCGAAGATGGCCCCAGGGAACCAAAGAGGCTTTGCCGACCCCCGGGAGAGGAGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCCGCAGCGGGCTCAGCTaGACGATGATGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVRSGLS*TMMKAG
Trigger: CCCCGCCTTCATCATCGTCAAGCTGAGCCCGCTGCG...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp AGGCGCGCTGCAAAGAGGTGTCTGCAGGGCAGACGGCGGGCGGCGTaGATTGAGCAGCTGCAGCGTGTCAGGGCCCCATCCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RRAAKRCLQGRRRAA*IEQLQRVRAPSRKK
Trigger: CTTCTTCCTGGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCAGACACCTCTTTGCAGCGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp TTCCTGCAGGCCGTCACCTGCAGCCAGGTGTTCACTCCTCGCCGCTaGCCATTCTGGGCTGCCTTCCAATACAGTCCCCACCGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: FLQAVTCSQVFTPRR*PFWAAFQYSPHRGA
Trigger: GGCACCCCGGTGGGGACTGTATTGGAAGGCAGCCCAGAATGGGCAGCGGCGAGGAGTGAACACCTGGCTGCAGGTGACGGCCTGCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp CGGCAAAGCCTCTTTGGTTCCCTGGGGCCATCTTCGCCTCCTTCCTaGAGGCCGTCACCTGCAGCCAGGTGTTCACTCCTCGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: RQSLFGSLGPSSPPS*RPSPAARCSLLAAA
Trigger: GGCAGCGGCGAGGAGTGAACACCTGGCTGCAGGTGACGGCCTGCAGGAAGGAGGCGAAGATGGCCCCAGGGAACCAAAGAGGCTTTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp AGAGGTGTCTGCAGGGCAGACGGCGGGCGGCGTGAATTGAGCAGCTaGAGCGTGTCAGGGCCCCATCCAGGAAGAAGTCCGAGGTGCCGT +
Preference number: 5 (lower is better)
Translates to: RGVCRADGGRRELSS*SVSGPHPGRSPRCR
Trigger: ACGGCACCTCGGACTTCTTCCTGGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCAGACACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 90 bp ACTGCTTGGAGATCTTGTTGGTGGTGCGCACCGGCAGGCAGGCGTTaGCCAGCAGGTGGCCCGGGCGGAAGTAGTAGGCGAACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: TAWRSCWWCAPAGRR*PAGGPGGSSRRTPA
Trigger: CGCTGGAGTTCGCCTACTACTTCCGCCCGGGCCACCTGCTGGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp GCCCTGGTGCGCGACGTCAGGAAGAACACCGTCTCCACCACAGCCTaGTCCTCCACGAACACCAGCTTCACCTTGGCCTCGGGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: ALVRDVRKNTVSTTA*SSTNTSFTLASGSV
Trigger: CACCGACCCCGAGGCCAAGGTGAAGCTGGTGTTCGTGGAGGACCAGGCTGTGGTGGAGACGGTGTTCTTCCTGACGTCGCGCACCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp CGCTGCAAAGAGGTGTCTGCAGGGCAGACGGCGGGCGGCGTGAATTaGGCAGCTGCAGCGTGTCAGGGCCCCATCCAGGAAGAAGTCCGA +
Preference number: 5 (lower is better)
Translates to: RCKEVSAGQTAGGVN*AAAACQGPIQEEVR
Trigger: TCGGACTTCTTCCTGGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCAGACACCTCTTTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp GGTCCCATGCTGCCTAGCAAAGGCCAACTCCTCAGCCACCAGGTCTaGCAGCTCTGGCCCGCAGGCTGCTCGGAATTTGGCCAGGGGTTC +
Preference number: 5 (lower is better)
Translates to: GPMLPSKGQLLSHQV*QLWPAGCSEFGQGF
Trigger: GAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCTGGTGGCTGAGGAGTTGGCCTTTGCTAGGCAGCATGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 90 bp GCCAGGTGCATGGAGCTCTTGACGAAGAAGAGCGCCAGCCGCTGCTaGCACCACGCGTCGAAGAAGCGGCTGAACTCGGCCCACGAGAAG +
Preference number: 5 (lower is better)
Translates to: ARCMELLTKKSASRC*HHASKKRLNSAHEK
Trigger: CTTCTCGTGGGCCGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGAACTGCTTGGAGATCTaGTTGGTGGTGCGCACCGGC +
Preference number: 5 (lower is better)
Translates to: LLTPSARPPSLFRRRWGSNCLEI*LVVRTG
Trigger: GCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTT...CGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 90 bp GGCCCACGGACCGGGCTCCCCCTCCATCTCCATTCTCCATGCCTGTaGCCCTCGTGTCTCCCAGCTGGACCAGAACTATATCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GPRTGLPLHLHSPCL*PSCLPAGPELYPPG
Trigger: GCCTGGAGGATATAGTTCTGGTCCAGCTGGGAGACACGAGGGTCACAGGCATGGAGAATGGAGATGGAGGGGGAGCCCGGTCCGTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp CACCTGCAGCCAGGTGTTCACTCCTCGCCGCTGCCCATTCTGGGCTaGCTTCCAATACAGTCCCCACCGGGGTGCCAGACACGACTCCAT +
Preference number: 5 (lower is better)
Translates to: HLQPGVHSSPLPILG*LPIQSPPGCQTRLH
Trigger: ATGGAGTCGTGTCTGGCACCCCGGTGGGGACTGTATTGGAAGGCAGCCCAGAATGGGCAGCGGCGAGGAGTGAACACCTGGCTGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 90 bp AGGGCAAAGCCAGCTCCGGTCCAGTGGAAACCCCGGGTCCCATGCTaGCTAGCAAAGGCCAACTCCTCAGCCACCAGGTCTGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RAKPAPVQWKPRVPC*LAKANSSATRSASS
Trigger: AGAGCTGGCAGACCTGGTGGCTGAGGAGTTGGCCTTTGCTAGGCAGCATGGGACCCGGGGTTTCCACTGGACCGGAGCTGGCTTTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp GCTGCACTCCCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCCAGCGCACGCGGCCCTaGACGTCTGGCGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AALPRLASLLLPDTPHMIQRTRP*TSGALC
Trigger: GCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCTG...GATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGGGAGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCCCAGCTCCTGCGCCTaGCTGAAGAGCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLEPSSCA*LKSVSR
Trigger: CCTGGAGACGCTCTTCAGCAAGGCGCAGGAGCTGGG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp TCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAACGTCCGGCTCGGCTCTaGGGGCCCACGGACCGGGCT +
Preference number: 5 (lower is better)
Translates to: SLSLQKAMGVDVSRSWRKRPARL*GPTDRA
Trigger: AGCCCGGTCCGTGGGCCCCAAGAGCCGAGCCGGACG...TTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp TCTCCTGACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGTCGGCAAAGCCTCTTaGGTTCCCTGGGGCCATCTT +
Preference number: 5 (lower is better)
Translates to: SPDPQCPPSLSLQKAMGVVGKAS*VPWGHL
Trigger: AAGATGGCCCCAGGGAACCAAAGAGGCTTTGCCGAC...GACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGTCAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGGCGGGCGGCGTGAATaGAGCAGCTGCAGCGTGTCA +
Preference number: 5 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGGGRRE*SSCSVS
Trigger: TGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCC...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAACCGGCAGGCAGGCGTaGGCCAGCAGGTGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQTGRQA*ASRWPG
Trigger: CCCGGGCCACCTGCTGGCCAACGCCTGCCTGCCGGT...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTAACTGCTTGGAGATCTaGTTGGTGGTGCGCACCGGC +
Preference number: 5 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSNCLEI*LVVRTG
Trigger: GCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTT...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp ACCCCCAGTGCCCGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTGGGGCCACGAACTGCTaGGAGATCTTGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TPSARPPSLFRRRWGSMSGATNC*EILLVV
Trigger: CACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCC...AGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCGGGCACTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp AACTGGGTCCCCCTCAGGTCGGTGGTACTCCTGCGATCTTCCAGCTaGGCCACCCTCCAGGTATACCCTTCCAATCCTCTTAGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: NWVPLRSVVLLRSSS*ATLQVYPSNPLSAW
Trigger: CCAGGCGCTAAGAGGATTGGAAGGGTATACCTGGAGGGTGGCCCAGCTGGAAGATCGCAGGAGTACCACCGACCTGAGGGGGACCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CTCTCCTCTGCAATCTCTGGCCCTCTCCTCCTCTCATCTTCCCACTaGGGTCCCCTTTGGTCTCCGTTCTCAGGGGCCAACTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LSSAISGPLLLSSSH*GPLWSPFSGANSRD
Trigger: GTCCCTGGAGTTGGCCCCTGAGAACGGAGACCAAAGGGGACCCCAGTGGGAAGATGAGAGGAGGAGAGGGCCAGAGATTGCAGAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 90 bp AAGTCCGAGGTGCCGTCCTTAAGGGCAAAGCCAGCTCCGGTCCAGTaGAAACCCCGGGTCCCATGCTGCCTAGCAAAGGCCAACTCCTCA +
Preference number: 5 (lower is better)
Translates to: KSEVPSLRAKPAPVQ*KPRVPCCLAKANSS
Trigger: TGAGGAGTTGGCCTTTGCTAGGCAGCATGGGACCCGGGGTTTCCACTGGACCGGAGCTGGCTTTGCCCTTAAGGACGGCACCTCGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACAGCGCACGCGGCCCTaGACGTCTGGCGCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQQRTRP*TSGALC
Trigger: GCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCTG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CGCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAAGGTGCATGGAGCTCTaGACGAAGAAGAGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RPPSLFRRRWGSMSPGLGRCMEL*TKKSAS
Trigger: GCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCT...TCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp AGCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTAGGCCCCTTCTTCTTTaGACCCCCACCCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SPIIFGIEECPPTLLVEGRPLLL*TPTLAP
Trigger: GGGAGCGAGGGTGGGGGTCAAAAGAAGAAGGGGCCT...ACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACACCAGCTTCACCTaGGCCTCGGGGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQNTSFT*ASGSVR
Trigger: CCGCACCGACCCCGAGGCCAAGGTGAAGCTGGTGTT...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CCTCCATCTCCATTCTCCATGCCTGTGACCCTCGTGTCTCCCAGCTaGACCAGAACTATATCCTCCAGGCCCCTTCTTCTTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: PPSPFSMPVTLVSPS*TRTISSRPLLLLTP
Trigger: GGGGGTCAAAAGAAGAAGGGGCCTGGAGGATATAGTTCTGGTCCAGCTGGGAGACACGAGGGTCACAGGCATGGAGAATGGAGATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTAACACCAGCTTCACCTaGGCCTCGGGGTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISNTSFT*ASGSVR
Trigger: CCGCACCGACCCCGAGGCCAAGGTGAAGCTGGTGTT...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCCCCAGCTCCTGCGCCTaGCTGAAGAGCGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLIPSSCA*LKSVSR
Trigger: CCTGGAGACGCTCTTCAGCAAGGCGCAGGAGCTGGG...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAACAGGCTGCTCGGAATTaGGCCAGGGGTTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQQAARN*ARGSQS
Trigger: GGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTG...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp GCCCTATTATCTTTGGGATCGAAGAATGCCCTCCGACCCTCCTGGTGGAGGGTGCTGGCCAGTCTACTCTaGCCAGACACTCCCCATATG +
Preference number: 5 (lower is better)
Translates to: ALLSLGSKNALRPSWWRVLASLL*PDTPHM
Trigger: CATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAG...CACCCTCCACCAGGAGGGTCGGAGGGCATTCTTCGATCCCAAAGATAATAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAATGCTTGGAGATCTTGTaGGTGGTGCGCACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQCLEIL*VVRTGR
Trigger: CCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCA...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp GCCCTCCCTCTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGCGATGTCTCCAGGTCTaGGAGAAAAACCAAAACCAC +
Preference number: 5 (lower is better)
Translates to: ALPLSSEGDGGRCLQVLERCLQV*EKNQNH
Trigger: GTGGTTTTGGTTTTTCTCCAAGACCTGGAGACATCG...CTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAGAGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCAAGGTGCATGGAGCTCTaGACGAAGAAGAGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: PRPLHFVSTRLPHISFVSRCMEL*TKKSAS
Trigger: GCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCT...TGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAGAGACCACTTACAGCTaGCCCTTGGACCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LSSEGDGGRCLQVLEKNQETTYS*PLDPER
Trigger: CCTCTCTGGGTCCAAGGGCAAGCTGTAAGTGGTCTC...TTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCGCAGCGGGCTCAGCTaGACGATGATGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: FIPILKNNSPNNSPPLLERSGLS*TMMKAG
Trigger: CCCCGCCTTCATCATCGTCAAGCTGAGCCCGCTGCG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAACCAAAACCACGCCCCTaGCATTTCGTCTCTACCCGT +
Preference number: 5 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKPKPRP*HFVSTR
Trigger: ACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGG...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp AAACCAAAACCACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTCCAAAACCACGCCCCTaGCATTTCGTCTCTACCCGT +
Preference number: 5 (lower is better)
Translates to: KPKPRPLHFVSTRLPHISPKPRP*HFVSTR
Trigger: ACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGG...AGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGTGGTTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGTGCTTGGAGATCTTGTaGGTGGTGCGCACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: FIPILKNNSPNNSPPLLECLEIL*VVRTGR
Trigger: CCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCA...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS-3UTR CAA 90 bp CCTAGACTGGCCAGTCTACTCTTGCCAGACACTCCCCATATGATCGCTTCCTCCTTTCTGTCTCTTTGCTaGTCCTCTCTCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: PRLASLLLPDTPHMIASSFLSLC*SSLLHF
Trigger: GAAATGGAGGAGAGAGGACAAGCAAAGAGACAGAAA...GGAGGAAGCGATCATATGGGGAGTGTCTGGCAAGAGTAGACTGGCCAGTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCACTGCAACGGTCTCCTaGGCCTCAGCCCTATTATCT +
Preference number: 5 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLITATVS*ASALLS
Trigger: AGATAATAGGGCTGAGGCCAAGGAGACCGTTGCAGT...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp ACGCCCCTTGCATTTCGTCTCTACCCGTCTCCCACACATTTCTTTTGTCTCATCTCAGCCCTATTATCTTaGGGATCGAAGAATGCCCTC +
Preference number: 5 (lower is better)
Translates to: TPLAFRLYPSPTHFFCLISALLS*GSKNAL
Trigger: GAGGGCATTCTTCGATCCCAAAGATAATAGGGCTGA...GATGAGACAAAAGAAATGTGTGGGAGACGGGTAGAGACGAAATGCAAGGGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS-3UTR CAA 90 bp CTCTTCAGAAGGCGATGGGGGTCGATGTCTCCAGGTCTTGGAGAAAAACCAAAATTTCTGTCTCTTTGCTaGTCCTCTCTCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LFRRRWGSMSPGLGEKPKFLSLC*SSLLHF
Trigger: GAAATGGAGGAGAGAGGACAAGCAAAGAGACAGAAA...TTTTGGTTTTTCTCCAAGACCTGGAGACATCGACCCCCATCGCCTTCTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 90 bp CTGAGCTTCTTTGAGCTTCTTGCAAGCTCTAACGTTCTAGGTTTCTaGGTGATGTGTGTGTTTGATGCTGTTCCACTTTCAGATCTCCGA +
Preference number: 5 (lower is better)
Translates to: LSFFELLASSNVLGF*VMCVFDAVPLSDLR
Trigger: TCGGAGATCTGAAAGTGGAACAGCATCAAACACACACATCACCCAGAAACCTAGAACGTTAGAGCTTGCAAGAAGCTCAAAGAAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593921.1
CDS-3UTR CAA 90 bp TTTATTCCAATCCTGAAGAACAATAGTCCAAACAATTCCCCTCCCCTGCTGGAGCGATGTCTCCAGGTCTaGGAGAAAAACCAAAACCAC +
Preference number: 5 (lower is better)
Translates to: FIPILKNNSPNNSPPLLERCLQV*EKNQNH
Trigger: GTGGTTTTGGTTTTTCTCCAAGACCTGGAGACATCG...CTCCAGCAGGGGAGGGGAATTGTTTGGACTATTGTTCTTCAGGATTGGAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CTCGGTGTGCCCGGGCGCGCCACGCAGCAGGCAGCCTaGCGCGCACGGCCCGAGCCGTCCACGCACAGCACG +
Preference number: 6 (lower is better)
Translates to: LGVPGRATQQAA*RARPEPSTHST
Trigger: CGTGCTGTGCGTGGACGGCTCGGGCCGTGCGCGCCAGGCTGCCTGCTGCGTGGCGCGCCCGGGCACACCGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp GTGGGCGTGGAGCTCGGCCAGCGCCTCGTCGTAGGCTaGGGGCGACGACGCGCCAGCCAGGCGGCACAGGCG +
Preference number: 6 (lower is better)
Translates to: VGVELGQRLVVG*GRRRASQAAQA
Trigger: CGCCTGTGCCGCCTGGCTGGCGCGTCGTCGCCCGCAGCCTACGACGAGGCGCTGGCCGAGCTCCACGCCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp CGTGCAGGGCGTCCAGGACGCCGTGGTCGCGGCCCTTaGAGTAGGACAGCAGGCGGCGCACGTCGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RAGRPGRRGRGP*SRTAGGARRLG
Trigger: CCCCAGCCGACGTGCGCCGCCTGCTGTCCTACTGCAAGGGCCGCGACCACGGCGTCCTGGACGCCCTGCACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp GCCTCGGGGTCGGTGCGGAAGAGGCCCTCGAGCACGTaGAGGGCGTCCAGGACGCCGTGGTCGCGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: ASGSVRKRPSST*RASRTPWSRPL
Trigger: CAAGGGCCGCGACCACGGCGTCCTGGACGCCCTGCACGTGCTCGAGGGCCTCTTCCGCACCGACCCCGAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp AGGCAGCGCACGCGGCCCTTGACGTCTGGCGCGCTCTaGAGCAGCGACGCGAGCGCGAAGCGCAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: RQRTRPLTSGAL*SSDASAKRSRL
Trigger: GAGCCTGCTGCGCTTCGCGCTCGCGTCGCTGCTGCAGAGCGCGCCAGACGTCAAGGGCCGCGTGCGCTGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CGCGAGGGGCTGAGACGACGCAGCAGTCGCCGGCGGTaGCCTCGCACCAGGGCACACGCGTCCAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: REGLRRRSSRRR*PRTRAHASRSL
Trigger: CAGAGACCTGGACGCGTGTGCCCTGGTGCGAGGCCACCGCCGGCGACTGCTGCGTCGTCTCAGCCCCTCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp AGCGGGGGCGCACTGGCCCAGCGGCAGCGCGCCAGGTaGATGGAGCTCTTGACGAAGAAGAGCGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: SGGALAQRQRAR*MELLTKKSASR
Trigger: GCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCAGTGCGCCCCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328759.11
ENST00000593921.1
ENST00000614654.2
CDS GCA 72 bp TCCACGCACAGCACGGCCAGCAGATCCAGCGCGCCCTaGAGCCCCGGCAGCCGGTCCACCAGCAGCATGCGA +
Preference number: 6 (lower is better)
Translates to: STHSTASRSSAP*SPGSRSTSSMR
Trigger: TCGCATGCTGCTGGTGGACCGGCTGCCGGGGCTGCAGGGCGCGCTGGATCTGCTGGCCGTGCTGTGCGTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp CTGAAGAGCGTCTCCAGGCCCTGCGCGCGGCAGATCTaGACGCGCGCGCAGGGCAGCAGCTGGCGCACTGCA +
Preference number: 6 (lower is better)
Translates to: LKSVSRPCARQI*TRAQGSSWRTA
Trigger: TGCAGTGCGCCAGCTGCTGCCCTGCGCGCGCGTGCAGATCTGCCGCGCGCAGGGCCTGGAGACGCTCTTCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp AACTCCAGCGGGCAGGCCGGGTGTGAGTGGGTCAGCTaGCACTCCGTCACCACGAGGCGGTCCCGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: NSSGQAGCEWVS*HSVTTRRSRSG
Trigger: CCCGCTGCGGGACCGCCTCGTGGTGACGGAGTGCCAGCTGACCCACTCACACCCGGCCTGCCCGCTGGAGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 90 bp GGGGGCGCACTGGCCCAGCGGCAGCGCGCCAGGTGCATGGAGCTCTaGACGAAGAAGAGCGCCAGCCGCTGCTGGCACCACGCGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GGALAQRQRARCMEL*TKKSASRCWHHASK
Trigger: CTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCAGTGCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp GGTGGCCTCGCACCAGGGCACACGCGTCCAGGTCTCTaGCCGCCTCGAAGGCGCGGAAGCGGACCCACATGT +
Preference number: 6 (lower is better)
Translates to: GGLAPGHTRPGL*PPRRRGSGPTC
Trigger: ACATGTGGGTCCGCTTCCGCGCCTTCGAGGCGGCCAGAGACCTGGACGCGTGTGCCCTGGTGCGAGGCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 72 bp TCCGTCACCACGAGGCGGTCCCGCAGCGGGCTCAGCTaGACGATGATGAAGGCGGGGCAGCCGGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SVTTRRSRSGLS*TMMKAGQPGWG
Trigger: TCCCCAGCCCGGCTGCCCCGCCTTCATCATCGTCAAGCTGAGCCCGCTGCGGGACCGCCTCGTGGTGACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 90 bp TCAGCCACCAGGTCTGCCAGCTCTGGCCCGCAGGCTGCTCGGAATTaGGCCAGGGGTTCCCAGTCCACCTCCTCCTCTCCCGGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: SATRSASSGPQAARN*ARGSQSTSSSPGGR
Trigger: CCGACCCCCGGGAGAGGAGGAGGTGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCTGGTGGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS TCA 72 bp CCAGCCGCTGCTGGCACCACGCGTCGAAGAAGCGGCTaGACTCGGCCCACGAGAAGAAGGCCCGCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: PAAAGTTRRRSG*TRPTRRRPAPA
Trigger: TGCGGGAGCGGGCCTTCTTCTCGTGGGCCGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 72 bp TGGCCCAGCGGCAGCGCGCCAGGTGCATGGAGCTCTTaGCGAAGAAGAGCGCCAGCCGCTGCTGGCACCACG +
Preference number: 6 (lower is better)
Translates to: WPSGSAPGAWSS*RRRAPAAAGTT
Trigger: CGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp GGAAGCGGACCCACATGTCGCGGCGGGGCTCCCAGTTaGGCTCGAAGTAGTCCACGAAGGCGGCTGGGCCGT +
Preference number: 6 (lower is better)
Translates to: GSGPTCRGGAPS*ARSSPRRRLGR
Trigger: ACGGCCCAGCCGCCTTCGTGGACTACTTCGAGCGCAACTGGGAGCCCCGCCGCGACATGTGGGTCCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp GCAGGCGGCGCACGTCGGCTGGGGCCACGAACTGCTTaGAGATCTTGTTGGTGGTGCGCACCGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: AGGARRLGPRTA*RSCWWCAPAGR
Trigger: CCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 72 bp CTGGCCCAGCGGCAGCGCGCCAGGTGCATGGAGCTCTaGACGAAGAAGAGCGCCAGCCGCTGCTGGCACCAC +
Preference number: 6 (lower is better)
Translates to: LAQRQRARCMEL*TKKSASRCWHH
Trigger: GTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCACCTGGCGCGCTGCCGCTGGGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp CCACGAACACCAGCTTCACCTTGGCCTCGGGGTCGGTaGGGAAGAGGCCCTCGAGCACGTGCAGGGCGTCCA +
Preference number: 6 (lower is better)
Translates to: PRTPASPWPRGR*GRGPRARAGRP
Trigger: TGGACGCCCTGCACGTGCTCGAGGGCCTCTTCCGCACCGACCCCGAGGCCAAGGTGAAGCTGGTGTTCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp GCAGCATGCGAGGGAAGCGCCGCAGCAGCGCCCTGGTaGGCGACGTCAGGAAGAACACCGTCTCCACCACAG +
Preference number: 6 (lower is better)
Translates to: AACEGSAAAAPW*ATSGRTPSPPQ
Trigger: CTGTGGTGGAGACGGTGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCTCGCATGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CCAGCAGCATGCGAGGGAAGCGCCGCAGCAGCGCCCTaGTGCGCGACGTCAGGAAGAACACCGTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PAACEGSAAAAP*CATSGRTPSPP
Trigger: TGGTGGAGACGGTGTTCTTCCTGACGTCGCGCACCAGGGCGCTGCTGCGGCGCTTCCCTCGCATGCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp GGTCTGCCAGCTCTGGCCCGCAGGCTGCTCGGAATTTaGCCAGGGGTTCCCAGTCCACCTCCTCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: GLPALARRLLGI*PGVPSPPPPLP
Trigger: CGGGAGAGGAGGAGGTGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CAA 72 bp CGCACGTCGGCTGGGGCCACGAACTGCTTGGAGATCTaGTTGGTGGTGCGCACCGGCAGGCAGGCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: RTSAGATNCLEI*LVVRTGRQALA
Trigger: GGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 72 bp AGCAGGCGGCGCACGTCGGCTGGGGCCACGAACTGCTaGGAGATCTTGTTGGTGGTGCGCACCGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SRRRTSAGATNC*EILLVVRTGRQ
Trigger: CTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 72 bp GAAGTAGTAGGCGAACTCCAGCGGGCAGGCCGGGTGTaGGTGGGTCAGCTGGCACTCCGTCACCACGAGGCG +
Preference number: 6 (lower is better)
Translates to: EVVGELQRAGRV*VGQLALRHHEA
Trigger: CGCCTCGTGGTGACGGAGTGCCAGCTGACCCACTCACACCCGGCCTGCCCGCTGGAGTTCGCCTACTACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 72 bp GAGGTGTCTGCAGGGCAGACGGCGGGCGGCGTGAATTaGGCAGCTGCAGCGTGTCAGGGCCCCATCCAGGAA +
Preference number: 6 (lower is better)
Translates to: EVSAGQTAGGVN*AAAACQGPIQE
Trigger: TTCCTGGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCAGACACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS TCA 72 bp GCAAAGAGGTGTCTGCAGGGCAGACGGCGGGCGGCGTaGATTGAGCAGCTGCAGCGTGTCAGGGCCCCATCC +
Preference number: 6 (lower is better)
Translates to: AKRCLQGRRRAA*IEQLQRVRAPS
Trigger: GGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCAGACACCTCTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 72 bp GGGGCCATCTTCGCCTCCTTCCTGCAGGCCGTCACCTaGAGCCAGGTGTTCACTCCTCGCCGCTGCCCATTC +
Preference number: 6 (lower is better)
Translates to: GAIFASFLQAVT*SQVFTPRRCPF
Trigger: GAATGGGCAGCGGCGAGGAGTGAACACCTGGCTGCAGGTGACGGCCTGCAGGAAGGAGGCGAAGATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 72 bp CTCAGCCACCAGGTCTGCCAGCTCTGGCCCGCAGGCTaGTCGGAATTTGGCCAGGGGTTCCCAGTCCACCTC +
Preference number: 6 (lower is better)
Translates to: LSHQVCQLWPAG*SEFGQGFPVHL
Trigger: GAGGTGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCTGGTGGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 72 bp TGCAGGGCAGACGGCGGGCGGCGTGAATTGAGCAGCTaGAGCGTGTCAGGGCCCCATCCAGGAAGAAGTCCG +
Preference number: 6 (lower is better)
Translates to: CRADGGRRELSS*SVSGPHPGRSP
Trigger: CGGACTTCTTCCTGGATGGGGCCCTGACACGCTGCAGCTGCTCAATTCACGCCGCCCGCCGTCTGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 72 bp CGTCGGCTGGGGCCACGAACTGCTTGGAGATCTTGTTaGTGGTGCGCACCGGCAGGCAGGCGTTGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RRLGPRTAWRSC*WCAPAGRRWPA
Trigger: TGCTGGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CCTCTCCCGGGGGTCGGCAAAGCCTCTTTGGTTCCCTaGGGCCATCTTCGCCTCCTTCCTGCAGGCCGTCAC +
Preference number: 6 (lower is better)
Translates to: PLPGVGKASLVP*GHLRLLPAGRH
Trigger: GTGACGGCCTGCAGGAAGGAGGCGAAGATGGCCCCAGGGAACCAAAGAGGCTTTGCCGACCCCCGGGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CAA 72 bp ACGTCGGCTGGGGCCACGAACTGCTTGGAGATCTTGTaGGTGGTGCGCACCGGCAGGCAGGCGTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: TSAGATNCLEIL*VVRTGRQALAS
Trigger: GCTGGCCAACGCCTGCCTGCCGGTGCGCACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CAA 72 bp AGGTCTGCCAGCTCTGGCCCGCAGGCTGCTCGGAATTaGGCCAGGGGTTCCCAGTCCACCTCCTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RSASSGPQAARN*ARGSQSTSSSP
Trigger: GGGAGAGGAGGAGGTGGACTGGGAACCCCTGGCCAAATTCCGAGCAGCCTGCGGGCCAGAGCTGGCAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 72 bp TGCAGCCAGGTGTTCACTCCTCGCCGCTGCCCATTCTaGGCTGCCTTCCAATACAGTCCCCACCGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: CSQVFTPRRCPF*AAFQYSPHRGA
Trigger: GGCACCCCGGTGGGGACTGTATTGGAAGGCAGCCCAGAATGGGCAGCGGCGAGGAGTGAACACCTGGCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 72 bp CCAGGTGTTCACTCCTCGCCGCTGCCCATTCTGGGCTaGCTTCCAATACAGTCCCCACCGGGGTGCCAGACA +
Preference number: 6 (lower is better)
Translates to: PGVHSSPLPILG*LPIQSPPGCQT
Trigger: TGTCTGGCACCCCGGTGGGGACTGTATTGGAAGGCAGCCCAGAATGGGCAGCGGCGAGGAGTGAACACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS GCA 72 bp CCAGCTCCGGTCCAGTGGAAACCCCGGGTCCCATGCTaGCTAGCAAAGGCCAACTCCTCAGCCACCAGGTCT +
Preference number: 6 (lower is better)
Translates to: PAPVQWKPRVPC*LAKANSSATRS
Trigger: AGACCTGGTGGCTGAGGAGTTGGCCTTTGCTAGGCAGCATGGGACCCGGGGTTTCCACTGGACCGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS CCA 72 bp ATGGAGCTCTTGACGAAGAAGAGCGCCAGCCGCTGCTaGCACCACGCGTCGAAGAAGCGGCTGAACTCGGCC +
Preference number: 6 (lower is better)
Translates to: MELLTKKSASRC*HHASKKRLNSA
Trigger: GGCCGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCAT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp GCCCTTGCAGTAGGACAGCAGGCGGCGCACGTCGGCTaGGGCCACGAACTGCTTGGAGATCTTGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: ALAVGQQAAHVG*GHELLGDLVGG
Trigger: ACCACCAACAAGATCTCCAAGCAGTTCGTGGCCCCAGCCGACGTGCGCCGCCTGCTGTCCTACTGCAAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS GCA 72 bp TGCATGGAGCTCTTGACGAAGAAGAGCGCCAGCCGCTaGTGGCACCACGCGTCGAAGAAGCGGCTGAACTCG +
Preference number: 6 (lower is better)
Translates to: CMELLTKKSASR*WHHASKKRLNS
Trigger: CGAGTTCAGCCGCTTCTTCGACGCGTGGTGCCAGCAGCGGCTGGCGCTCTTCTTCGTCAAGAGCTCCATGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CGCGACGTCAGGAAGAACACCGTCTCCACCACAGCCTaGTCCTCCACGAACACCAGCTTCACCTTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: RDVRKNTVSTTA*SSTNTSFTLAS
Trigger: CGAGGCCAAGGTGAAGCTGGTGTTCGTGGAGGACCAGGCTGTGGTGGAGACGGTGTTCTTCCTGACGTCGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CCCCTCAGGTCGGTGGTACTCCTGCGATCTTCCAGCTaGGCCACCCTCCAGGTATACCCTTCCAATCCTCTT +
Preference number: 6 (lower is better)
Translates to: PLRSVVLLRSSS*ATLQVYPSNPL
Trigger: AAGAGGATTGGAAGGGTATACCTGGAGGGTGGCCCAGCTGGAAGATCGCAGGAGTACCACCGACCTGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS TCA 72 bp ACCGGGCTCCCCCTCCATCTCCATTCTCCATGCCTGTaGCCCTCGTGTCTCCCAGCTGGACCAGAACTATAT +
Preference number: 6 (lower is better)
Translates to: TGLPLHLHSPCL*PSCLPAGPELY
Trigger: ATATAGTTCTGGTCCAGCTGGGAGACACGAGGGTCACAGGCATGGAGAATGGAGATGGAGGGGGAGCCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614654.2
CDS TCA 72 bp GCTTCTGATTCTCCAACCGACCCCCTCTCCAATCTCTaGTCTGCAGTGCCCTCCCCTTCTCACCTTCGAACT +
Preference number: 6 (lower is better)
Translates to: ASDSPTDPLSNL*SAVPSPSHLRT
Trigger: AGTTCGAAGGTGAGAAGGGGAGGGCACTGCAGATCAGAGATTGGAGAGGGGGTCGGTTGGAGAATCAGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328759.11
ENST00000614654.2
CDS CCA 72 bp CCATTCTCCATGCCTGTGACCCTCGTGTCTCCCAGCTaGACCAGAACTATATCCTCCAGGCCCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PFSMPVTLVSPS*TRTISSRPLLL
Trigger: AAGAAGAAGGGGCCTGGAGGATATAGTTCTGGTCCAGCTGGGAGACACGAGGGTCACAGGCATGGAGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614654.2