RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSWIM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000214941

Ensembl transcript IDs: ENST00000399277.6, ENST00000460252.5, ENST00000460315.5, ENST00000472495.5, ENST00000474716.5, ENST00000476496.5, ENST00000486655.5, ENST00000486706.6, ENST00000490395.5, ENST00000491631.5, ENST00000497434.6, ENST00000579955.1, ENST00000584519.5, ENST00000585208.5

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACCTGCTACTGTTTAGCCACATCTCTGCTCTGATCTTCTGTTGCTaGTCAATAGTTTCCTGGACCCAAGGAAAAGAACTGACCTACTCG +
Preference number: 1 (lower is better)
Translates to: YLLLFSHISALIFCC*SIVSWTQGKELTYS
Trigger: CGAGTAGGTCAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGCTAAACAGTAGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR CCA 90 bp GATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAGAGAAACTTCAGCGATAACAGATAT +
Preference number: 1 (lower is better)
Translates to: DEIKVMDCRSTRSKA*VADEPKRNFSDNRY
Trigger: ATATCTGTTATCGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
3UTR GCA 90 bp TCATACCTGCTACTGTTTAGCCACATCTCTGCTCTGATCTTCTGTTaGTGCTCAATAGTTTCCTGGACCCAAGGAAAAGAACTGACCTAC +
Preference number: 1 (lower is better)
Translates to: SYLLLFSHISALIFC*CSIVSWTQGKELTY
Trigger: GTAGGTCAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGCTAAACAGTAGCAGGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR CCA 90 bp AGCCACATCTCTGCTCTGATCTTCTGTTGCTGCTCAATAGTTTCCTaGACCCAAGGAAAAGAACTGACCTACTCGTCGAAACTTCATCTT +
Preference number: 1 (lower is better)
Translates to: SHISALIFCCCSIVS*TQGKELTYSSKLHL
Trigger: AAGATGAAGTTTCGACGAGTAGGTCAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR TCA 90 bp AATACAGTCTACTTAAGCTGTTTTGGCACAAGCATCACAGATATTTaGAGCTTACAGAAACCAGAACCTCTAAGTCTTTTCATACCTGCT +
Preference number: 1 (lower is better)
Translates to: NTVYLSCFGTSITDI*SLQKPEPLSLFIPA
Trigger: AGCAGGTATGAAAAGACTTAGAGGTTCTGGTTTCTGTAAGCTTCAAATATCTGTGATGCTTGTGCCAAAACAGCTTAAGTAGACTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR CCA 90 bp TTCTCGATACTAACTCTCAAACAATACAGTCTACTTAAGCTGTTTTaGCACAAGCATCACAGATATTTGAAGCTTACAGAAACCAGAACC +
Preference number: 1 (lower is better)
Translates to: FSILTLKQYSLLKLF*HKHHRYLKLTETRT
Trigger: GGTTCTGGTTTCTGTAAGCTTCAAATATCTGTGATGCTTGTGCCAAAACAGCTTAAGTAGACTGTATTGTTTGAGAGTTAGTATCGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR TCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGGCAGGCGGAACTCCTaGCCTCATCATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: KRCLHRMLSLFRSTENANGRRNS*PHHPPA
Trigger: GGCAGGTGGATGATGAGGTCAGGAGTTCCGCCTGCC...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
3UTR-3UTR CCA 90 bp CTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LTQVNCQEMLAQDAVTLPGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...CGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp ATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: IKVMDCRSTRSKAWVADETRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...CTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp TGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: CTGCCHSSVALRMQMQDMGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...CATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp CTGACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: LTGPHNLTQVNCQEMLAQGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp GGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: GPHNLTQVNCQEMLAQDAGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...AGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp CCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: PHNLTQVNCQEMLAQDAVTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...GACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
3UTR-3UTR CCA 90 bp CACAGCACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: HSTSCSPGGKRDSNMKCLKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...CAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR CCA 90 bp AGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: RCLHRMLSLFRSTENANATRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...TGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp ATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: IKVMDCRSTRSKAWVADEAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...CTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR GCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 2 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: KRCLHRMLSLFRSTENANGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp TGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGAGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: CLHRMLSLFRSTENANAGAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...TCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp TTAGGCTGTAAAATCACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACCC +
Preference number: 2 (lower is better)
Translates to: LGCKITYIICLSTASTPSELAVS*DHATAP
Trigger: GGGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...AGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTGATTTTACAGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
3UTR-3UTR TCA 90 bp CATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACTGAGTGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACCC +
Preference number: 2 (lower is better)
Translates to: HFHLHVLLLLCSLGVQLSELAVS*DHATAP
Trigger: GGGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...ACTCAGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
3UTR-3UTR GCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACTG +
Preference number: 2 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFLTQVN*QEMLAL
Trigger: CAGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486655.5
3UTR-3UTR CCA 90 bp ATTGCAACACCTAGGCCCTGGGCTTTCCCCCAGCATTCATTCACTAGCACCTCATGCTCAATAGTTTCCTaGACCCAAGGAAAAGAACTG +
Preference number: 2 (lower is better)
Translates to: IATPRPWAFPQHSFTSTSCSIVS*TQGKEL
Trigger: CAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCA...TGAGGTGCTAGTGAATGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR CCA 90 bp CACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: HSSVALRMQMQDMNSNDKGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...CTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp AAATCACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: KSPISSVCPLLQLLLQYPGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...GGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CCA 90 bp CTAGGATCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: LGSSSGCGQLYHKFLSSYTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...ATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CCA 90 bp AAATCACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: KSPISSVCPLLQLLLQYPTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...GGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR TCA 90 bp AAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGCTGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: KTKSICQPQNIATPRPWAAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...AGCCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
3UTR-3UTR GCA 90 bp TGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCCTGGGAGGCAGAGGCTaGAGTGAGTTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: CFFSINNMSVNCLSETLSLGGRG*SELRSR
Trigger: GCGCGATCTCAACTCACTGCAGCCTCTGCCTCCCAG...GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
3UTR-3UTR TCA 90 bp ACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGATCCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: TSCSPGGKRDSNMKCLKIHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...GATCTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp GAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACAGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: ETGSGYFLTRLYRASHHTAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...TGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp GACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: DSGKLPRDACTGCCHSSVVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...TACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp TGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: CCHSSVALRMQMQDMNSNVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...ATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
3UTR-3UTR TCA 90 bp CACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: HSSVALRMQMQDMNSNDKVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...CTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
3UTR-3UTR GCA 90 bp TGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 2 (lower is better)
Translates to: CCHSSVALRMQMQDMNSNDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...ATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR GCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: KRCLHRMLSLFRSTENANLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp ATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 2 (lower is better)
Translates to: IKVMDCRSTRSKAWVADEMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...CTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
3UTR-3UTR TCA 90 bp AAATGCTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: KCCRQGIPVLLGSSSGCGFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...CCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR TCA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp GCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCATTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: AKRCLHRMLSLFRSTENAFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...TGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp TTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: LHRMLSLFRSTENANAGHHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...ATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp TGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGCCTCAGTGACAGAGTaGGACACTGTGATAACAGAT +
Preference number: 2 (lower is better)
Translates to: CCHSSVALRMQMQDMNSNASVTE*DTVITD
Trigger: ATCTGTTATCACAGTGTCTCACTCTGTCACTGAGGC...ATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
3UTR-3UTR GCA 90 bp CTAGGATCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: LGSSSGCGQLYHKFLSSYLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...ATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp CTTCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: LLVSSPSIICQSTACQRHTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...GTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp GACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: DWLRVFLDKTVQGFSSYTVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...TGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR GCA 90 bp AAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGCTAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 2 (lower is better)
Translates to: KTKSICQPQNIATPRPWANMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...AGCCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CCA 90 bp ACTGCTTCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTTATGAAAAAATTTAGCCGGGCATaGTGGCGGGTACCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: TASTPSAVSLQQYYMLMKKFSRA*WRVPVV
Trigger: GACTACAGGTACCCGCCACCATGCCCGGCTAAATTT...TTTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGAAGCAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR TCA 90 bp TTACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: LPKRLRDWLRVFLDKTVQFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...CTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp TCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: STPSAVSLQQYYMLMKCCAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...GCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
3UTR-3UTR TCA 90 bp TGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: CHSSVALRMQMQDMNSNDVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...GTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp TCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAATTGATAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 2 (lower is better)
Translates to: SGCGQLYHKFLSSYAEIDKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...ATCAATTTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
3UTR-3UTR TCA 90 bp TCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SCFFSINNMSVNCLSETLVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...AAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486655.5
ENST00000486706.6
ENST00000585208.5
3UTR-3UTR GCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 2 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp TCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAATTGATCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: SGCGQLYHKFLSSYAEIDHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...ATCAATTTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR TCA 90 bp TCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAATTGATGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: SGCGQLYHKFLSSYAEIDVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...ATCAATTTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR GCA 90 bp TCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTAAGTCTTTTCATACCTaGTACTGTTTAGCCACATCT +
Preference number: 2 (lower is better)
Translates to: SVHCFNSFCSIPATILHAKSFHT*YCLATS
Trigger: AGATGTGGCTAAACAGTAGCAGGTATGAAAAGACTT...AGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR-3UTR GCA 90 bp TCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAGTCTGTTCCTTCAATTaGCCTTTTATGCTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: SSSGCGQLYHKFLSSYAEVCSFN*PFMLLV
Trigger: AACAAGAAGCATAAAAGGGCAATTGAAGGAACAGAC...TTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476496.5
3UTR-3UTR CCA 90 bp GGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 2 (lower is better)
Translates to: GGKRDSNMKCLKIHFTSFMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...AAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460252.5
ENST00000491631.5
3UTR-3UTR TCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: SPSIICQSTACQRHLAADFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR TCA 90 bp TTTATGCTTCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 2 (lower is better)
Translates to: FMLLVSSPSIICQSTACQAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...CTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGAAGCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR TCA 90 bp TGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 2 (lower is better)
Translates to: CFFSINNMSVNCLSETLSVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CCA 90 bp TTAGGCTGTAAAATCACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 2 (lower is better)
Translates to: LGCKITYIICLSTASTPSMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...AGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTGATTTTACAGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR TCA 90 bp TCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: SCFFSINNMSVNCLSETLHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...AAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR GCA 90 bp AAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTCCATGTAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 2 (lower is better)
Translates to: KRDSNMKCLKIHFTSFPCNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...ACATGGAAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR CCA 90 bp TCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTATGTGTATGTTTTACTaGAACTTCCAAGGACCTGTA +
Preference number: 2 (lower is better)
Translates to: SSPSIICQSTACQRHLAAMCMFY*NFQGPV
Trigger: TACAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...AGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486706.6
ENST00000585208.5
3UTR-3UTR GCA 90 bp ATTTCATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACTAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 2 (lower is better)
Translates to: ISFSSSRIIASLLSRCPTNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...AGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CAA 90 bp AAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: KVMDCRSTRSKAWVADEPTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...TGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR CCA 72 bp ATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTaGGCTTTCCCCCAGCATTCATTCACTAGCACCTCA +
Preference number: 3 (lower is better)
Translates to: ICQPQNIATPRP*AFPQHSFTSTS
Trigger: TGAGGTGCTAGTGAATGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
3UTR-3UTR CAA 90 bp ATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: IKVMDCRSTRSKAWVADETAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...CTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CAA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
3UTR CCA 72 bp CGACAAAGTGAGACTCCATCGAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGACAAGACTGTACAGGGC +
Preference number: 3 (lower is better)
Translates to: RQSETPSKRLRD*LRVFLDKTVQG
Trigger: GCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGATGGAGTCTCACTTTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490395.5
3UTR-3UTR CAA 90 bp AGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: RCLHRMLSLFRSTENANATAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...TGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
3UTR GCA 72 bp CTGCTGACAGGTCCTCATAACCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAGGATGCTGTCACTCTT +
Preference number: 3 (lower is better)
Translates to: LLTGPHNLTQVN*QEMLAQDAVTL
Trigger: AAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CAA 90 bp GGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: GGKRDSNMKCLKIHFTSFTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...AAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
3UTR-3UTR CAA 90 bp GACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 3 (lower is better)
Translates to: DWLRVFLDKTVQGFSSYTMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...TGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR-3UTR CAA 90 bp GAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACAATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 3 (lower is better)
Translates to: ETGSGYFLTRLYRASHHTMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...TGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR TCA 72 bp ACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTTCTCATCATACACAAA +
Preference number: 3 (lower is better)
Translates to: TEASQRLAQGIS*QDCTGLLIIHK
Trigger: TTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
3UTR TCA 72 bp ATCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTTCTCATCATACACAAA +
Preference number: 3 (lower is better)
Translates to: IEASQRLAQGIS*QDCTGLLIIHK
Trigger: TTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490395.5
3UTR GCA 72 bp CTGTTTAGCCACATCTCTGCTCTGATCTTCTGTTGCTaGTCAATAGTTTCCTGGACCCAAGGAAAAGAACTG +
Preference number: 3 (lower is better)
Translates to: LFSHISALIFCC*SIVSWTQGKEL
Trigger: CAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGCTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR CCA 72 bp TCTGCTCTGATCTTCTGTTGCTGCTCAATAGTTTCCTaGACCCAAGGAAAAGAACTGACCTACTCGTCGAAA +
Preference number: 3 (lower is better)
Translates to: SALIFCCCSIVS*TQGKELTYSSK
Trigger: TTTCGACGAGTAGGTCAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR GCA 72 bp CTACTGTTTAGCCACATCTCTGCTCTGATCTTCTGTTaGTGCTCAATAGTTTCCTGGACCCAAGGAAAAGAA +
Preference number: 3 (lower is better)
Translates to: LLFSHISALIFC*CSIVSWTQGKE
Trigger: TTCTTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGCTAAACAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR GCA 72 bp CTGTTCCTTCAATTGCCCTGTTGTAAAGATCAGAAGTaGAGAGTGAAACCAGTTCTTCCCTTGTTCTCGATA +
Preference number: 3 (lower is better)
Translates to: LFLQLPCCKDQK*RVKPVLPLFSI
Trigger: TATCGAGAACAAGGGAAGAACTGGTTTCACTCTGCACTTCTGATCTTTACAACAGGGCAATTGAAGGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR GCA 72 bp GTATCCCTGCAACAATATTACATGCTTATGAAATGCTaGAGACAGGGAATTCCTGTCCTTCTAGGATCCTCT +
Preference number: 3 (lower is better)
Translates to: VSLQQYYMLMKC*RQGIPVLLGSS
Trigger: AGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
3UTR CCA 72 bp AGTAATGACAAGAAGCCAAACATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGTAAACACGCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: SNDKKPNMCMFY*NFQGPGKHAFH
Trigger: GTGGAAGGCGTGTTTACCAGGTCCTTGGAAGTTCCAGTAAAACATACACATGTTTGGCTTCTTGTCATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
3UTR-3UTR CAA 90 bp AAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTCCATGTATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 3 (lower is better)
Translates to: KRDSNMKCLKIHFTSFPCMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...ACATGGAAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR TCA 72 bp GAAGTGTCTGAAGATCCATTTCACCTCTTTTCCATGTaGATCATGACGCTTTCAATGCATTTCTTGACAGGA +
Preference number: 3 (lower is better)
Translates to: EVSEDPFHLFSM*IMTLSMHFLTG
Trigger: TCCTGTCAAGAAATGCATTGAAAGCGTCATGATTCACATGGAAAAGAGGTGAAATGGATCTTCAGACACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
3UTR GCA 72 bp CTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTaGAGTATCCCTGCAACAATATTACATGCTTATGAA +
Preference number: 3 (lower is better)
Translates to: LYHLSVHCFNSF*SIPATILHAYE
Trigger: TTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
3UTR CCA 72 bp CTAACTCTCAAACAATACAGTCTACTTAAGCTGTTTTaGCACAAGCATCACAGATATTTGAAGCTTACAGAA +
Preference number: 3 (lower is better)
Translates to: LTLKQYSLLKLF*HKHHRYLKLTE
Trigger: TTCTGTAAGCTTCAAATATCTGTGATGCTTGTGCCAAAACAGCTTAAGTAGACTGTATTGTTTGAGAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp GACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACCCGCGACGCTCCAGCTaGCTGCGCCTACCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: DCRSTRSKAWVADEPKRNPRRSS*LRLPVE
Trigger: CTCCACAGGTAGGCGCAGTCAGCTGGAGCGTCGCGG...GTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp CCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCCCGCGACGCTCCAGCTaGCTGCGCCTACCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PKRLRDWLRVFLDKTVQGPRRSS*LRLPVE
Trigger: CTCCACAGGTAGGCGCAGTCAGCTGGAGCGTCGCGG...GCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR GCA 90 bp CGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: RSVSETGSGYFLTRLYRALRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...AGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: LPRDACTGCCHSSVALRMLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...CATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAATGCTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGATTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: KCCRQGIPVLLGSSSGCGIRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAT...CCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp TGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: CLHRMLSLFRSTENANAGLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...TCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp ATTGCAACACCTAGGCCCTGGGCTTTCCCCCAGCATTCATTCACTAGCACCTCAGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: IATPRPWAFPQHSFTSTSELAVS*DHATAP
Trigger: GGGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...TGAGGTGCTAGTGAATGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR GCA 90 bp GGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: GSGYFLTRLYRASHHTQTLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...GGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AGCACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGGACGCTCCAGCTGACTaGGCCTACCTGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: STSCSPGGKRDSNMKCLKDAPAD*AYLWRI
Trigger: GATCCTCCACAGGTAGGCGCAGTCAGCTGGAGCGTC...CTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000460252.5
ENST00000491631.5
CDS-3UTR CCA 90 bp GTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VMDCRSTRSKAWVADEPKTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp AAATCACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCCCGCGACGCTCCAGCTaGCTGCGCCTACCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSPISSVCPLLQLLLQYPPRRSS*LRLPVE
Trigger: CTCCACAGGTAGGCGCAGTCAGCTGGAGCGTCGCGG...GGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp AGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTCCACCGCGACGCTCCAGCTaGCTGCGCCTACCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RVFLDKTVQGFSSYTNPPPRRSS*LRLPVE
Trigger: CTCCACAGGTAGGCGCAGTCAGCTGGAGCGTCGCGG...TGGAGGGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR GCA 90 bp CGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCAGACGCTCCAGCTGACTaGGCCTACCTGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: RLRDWLRVFLDKTVQGFSDAPAD*AYLWRI
Trigger: GATCCTCCACAGGTAGGCGCAGTCAGCTGGAGCGTC...TGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000491631.5
CDS-3UTR GCA 90 bp TTCAGACTGAAAATCCCTGGTAGTACCTGTAGTTTCCTTCCAGGACACGATTTTCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: FRLKIPGSTCSFLPGHDFLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...AAAATCGTGTCCTGGAAGGAAACTACAGGTACTACCAGGGATTTTCAGTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: SPSIICQSTACQRHLAADLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp GTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGAAGCCAAACCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VALRMQMQDMNSNDKKPNLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...GTTTGGCTTCTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp TGCTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGAAATTTAGCCGGGCATaGTGGCGGGTACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CCRQGIPVLLGSSSGCGQKFSRA*WRVPVV
Trigger: GACTACAGGTACCCGCCACCATGCCCGGCTAAATTT...CTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR CCA 90 bp CTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGGCAACACCTAGGCCCTaGGCTTTCCCCCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: LTQVNCQEMLAQDAVTLPATPRP*AFPQHS
Trigger: TGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGC...CGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp TGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGGCAACACCTAGGCCCTaGGCTTTCCCCCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: CTGCCHSSVALRMQMQDMATPRP*AFPQHS
Trigger: TGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGC...CATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR TCA 90 bp TTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCCCGCGACGCTCCAGCTaGCTGCGCCTACCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FFSINNMSVNCLSETLSCPRRSS*LRLPVE
Trigger: CTCCACAGGTAGGCGCAGTCAGCTGGAGCGTCGCGG...GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp AAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KVMDCRSTRSKAWVADEPAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...TGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATCTGAGATCACGCCACTaGACCCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: CCHSSVALRMQMQDMNSNLRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGGGTGCAGTGGCGTGATCTCAG...ATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490395.5
CDS-3UTR CCA 90 bp CTGACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTGPHNLTQVNCQEMLAQTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp GGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPHNLTQVNCQEMLAQDATRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...AGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp CGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RLRDWLRVFLDKTVQGFSTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...TGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp ACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TAKRCLHRMLSLFRSTENTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...ATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp AAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: KVMDCRSTRSKAWVADEPKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...TGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp CCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PKRLRDWLRVFLDKTVQGAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...GCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp ATCTCTGCTCTGATCTTCTGTTGCTGCTCAATAGTTTCCTGGACCCAAGGAAAAGAGCTTGCAGTGAGCTaGGATCACGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: ISALIFCCCSIVSWTQGKELAVS*DHATAP
Trigger: GGGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTC...TTTTCCTTGGGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAGAGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp AGCACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: STSCSPGGKRDSNMKCLKVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...CTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486655.5
ENST00000486706.6
CDS-3UTR GCA 90 bp CGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RSVSETGSGYFLTRLYRADACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...AGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: LPRDACTGCCHSSVALRMDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...CATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TTCAGACTGAAAATCCCTGGTAGTACCTGTAGTTTCCTTCCAGGACACGATTTTCTGAGATCACGCCACTaGACCCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: FRLKIPGSTCSFLPGHDFLRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGGGTGCAGTGGCGTGATCTCAG...AAAATCGTGTCCTGGAAGGAAACTACAGGTACTACCAGGGATTTTCAGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR GCA 90 bp ATTTCATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACTCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: ISFSSSRIIASLLSRCPTLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...AGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp AAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGCTGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KTKSICQPQNIATPRPWAGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...AGCCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp TTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LHRMLSLFRSTENANAGHGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...ATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp TTACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LPKRLRDWLRVFLDKTVQTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...CTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp AACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NLTQVNCQEMLAQDAVTLTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...AAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp CCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PKRLRDWLRVFLDKTVQGKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...GCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp CGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTAGGATCCTCTTCTaGCTGTGGGCAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: RSVSETGSGYFLTRLYRASRILF*LWAALP
Trigger: TGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAGA...AGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR CCA 90 bp GCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCATCTAGGATCCTCTTCTaGCTGTGGGCAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: AKRCLHRMLSLFRSTENASRILF*LWAALP
Trigger: TGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAGA...TGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR TCA 90 bp CTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGCTGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: LQTGNSCPSRILFWLWAAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...AGCTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR TCA 90 bp CCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PDSGKLPRDACTGCCHSSAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...GGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp CTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LTQVNCQEMLAQDAVTLPAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...CGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp CTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPRDACTGCCHSSVALRMAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...CATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCGCCACATCTCTGCTCTaGTCTTCTGTTGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFATSLL*SSVAAQ
Trigger: TTGAGCAGCAACAGAAGATCAGAGCAGAGATGTGGC...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp GAACTTCCAAGGACCTGTAATCCCAATATTGTGAGAGGCCAAGGTGGGAGGATCGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ELPRTCNPNIVRGQGGRIVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...GATCCTCCCACCTTGGCCTCTCACAATATTGGGATTACAGGTCCTTGGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
CDS-3UTR TCA 90 bp GCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAGCCTCAGTGACAGAGTaGGACACTGTGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: AKRCLHRMLSLFRSTENAASVTE*DTVITD
Trigger: ATCTGTTATCACAGTGTCTCACTCTGTCACTGAGGC...TGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
CDS-3UTR TCA 90 bp CACAGCACCTCCTGCAGTCCTTTTATGCTTCTTGTTTCTTCTCCATCAATAATAGGCAGGCGGAACTCCTaGCCTCATCATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: HSTSCSPFMLLVSSPSIIGRRNS*PHHPPA
Trigger: GGCAGGTGGATGATGAGGTCAGGAGTTCCGCCTGCC...TATTATTGATGGAGAAGAAACAAGAAGCATAAAAGGACTGCAGGAGGTGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585208.5
CDS-3UTR GCA 90 bp GTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGAAGCCAAACGACGCTCCAGCTGACTaGGCCTACCTGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: VALRMQMQDMNSNDKKPNDAPAD*AYLWRI
Trigger: GATCCTCCACAGGTAGGCGCAGTCAGCTGGAGCGTC...GTTTGGCTTCTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000491631.5
ENST00000579955.1
CDS-3UTR GCA 90 bp ACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: TAKRCLHRMLSLFRSTENDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...ATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CTGCTGACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCAGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: LLTGPHNLTQVNCQEMLADACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...TGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp ACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACTCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: TVDQLGPRPGWLMSQRETLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...AGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: PDSGKLPRDACTGCCHSSLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CCACTGGGTGATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: PLGDEIKVMDCRSTRSKALTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATCACCCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TTTATGCTTCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGCTTCGCGCGCTCTCCTaGACCGCCGCCGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: FMLLVSSPSIICQSTACQLRALS*TAAAIS
Trigger: CGAGATGGCGGCGGCGGTGCAGGAGAGCGCGCGAAG...CTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGAAGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp TCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SETGSGYFLTRLYRASHHGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...ATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp GATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACTTCAGCGGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: DQLGPRPGWLMSQRETSAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...CGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
CDS-3UTR TCA 90 bp GATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACTTCAGCGCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: DQLGPRPGWLMSQRETSAHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...CGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp CACAGCACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: HSTSCSPGGKRDSNMKCLHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...CAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp TACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: YRSVSETGSGYFLTRLYRAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...CCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RCLHRMLSLFRSTENANADACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...TGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CTGACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: LTGPHNLTQVNCQEMLAQLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TGCTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: CCRQGIPVLLGSSSGCGQNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...CTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp TGGAACTTCCAAGGACCTGGTAAACACGCCTTCCACTGGGTGATGAGATTAAGGACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WNFQGPGKHAFHWVMRLRTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...CCTTAATCTCATCACCCAGTGGAAGGCGTGTTTACCAGGTCCTTGGAAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
CDS-3UTR GCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCGTCTGTTCCTTCAATTaGCCTGTAGTCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFVCSFN*PVVPAT
Trigger: AGTAGCTGGGACTACAGGGCAATTGAAGGAACAGAC...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490395.5
CDS-3UTR GCA 90 bp TTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCCTGGGAGGCAGAGGCTaGAGTGAGTTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: FFSINNMSVNCLSETLSCLGGRG*SELRSR
Trigger: GCGCGATCTCAACTCACTGCAGCCTCTGCCTCCCAG...GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
CDS-3UTR CCA 90 bp ACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: TGSGYFLTRLYRASHHTQGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...TTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp CTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGCTATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: LQTGNSCPSRILFWLWAAMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...AGCTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp ACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TAKRCLHRMLSLFRSTENKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...ATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp GGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTGCAACACCTAGGCCCTaGGCTTTCCCCCAGCATTCA +
Preference number: 4 (lower is better)
Translates to: GGKRDSNMKCLKIHFTSFATPRP*AFPQHS
Trigger: TGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGC...AAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp CCACTGGGTGATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: PLGDEIKVMDCRSTRSKAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...GGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATCACCCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp GCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: AKRCLHRMLSLFRSTENAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...TGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp CTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: LTQVNCQEMLAQDAVTLPVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...CGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp AAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCATTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: KVMDCRSTRSKAWVADEPFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...TGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp CGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: RSVSETGSGYFLTRLYRAHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...AGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp TCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SETGSGYFLTRLYRASHHVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...ATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486655.5
ENST00000486706.6
ENST00000585208.5
CDS-3UTR GCA 90 bp GATTTCATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACGACGCTCCAGCTGACTaGGCCTACCTGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: DFIFIFTYYCFFALSVSNDAPAD*AYLWRI
Trigger: GATCCTCCACAGGTAGGCGCAGTCAGCTGGAGCGTC...GTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp AGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RDWLRVFLDKTVQGFSSYDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...GTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TTTTACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: FYRSVSETGSGYFLTRLYDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...GTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp ACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: TGPHNLTQVNCQEMLAQDLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...ATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TTACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: LPKRLRDWLRVFLDKTVQLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...CTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: PKRLRDWLRVFLDKTVQGNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACGGTCCAAGGCCTGGGTaGCTGATGAGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPSIICQSTACQRHLAADGPRPG*LMSQRE
Trigger: TTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACC...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp GACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: DCRSTRSKAWVADEPKRNMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...GTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp AAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGCTAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: KTKSICQPQNIATPRPWAKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...AGCCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR TCA 90 bp GGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: GPHNLTQVNCQEMLAQDAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...AGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TGGAACTTCCAAGGACCTGGTAAACACGCCTTCCACTGGGTGATGAGATTAAGGCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: WNFQGPGKHAFHWVMRLRHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...CCTTAATCTCATCACCCAGTGGAAGGCGTGTTTACCAGGTCCTTGGAAGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460252.5
ENST00000491631.5
CDS-3UTR TCA 90 bp TTTTACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FYRSVSETGSGYFLTRLYAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...GTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCGAGGCTGCAGTGAGTTaGGATCGCGCCACTGTACTC +
Preference number: 4 (lower is better)
Translates to: CFFSINNMSVNCLSETLSEAAVS*DRATVL
Trigger: GAGTACAGTGGCGCGATCTCAACTCACTGCAGCCTC...GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
CDS-3UTR GCA 90 bp TCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSSGCGQLYHKFLSSYAEDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...TTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp CTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: LRVFLDKTVQGFSSYTNPDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...AGGGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CCACTGGGTGATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: PLGDEIKVMDCRSTRSKANMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATCACCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KRCLHRMLSLFRSTENANTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RDWLRVFLDKTVQGFSSYTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...GTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp GGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSGYFLTRLYRASHHTQTTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...GGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp TCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: STPSAVSLQQYYMLMKCCTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...GCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp GACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: DWLRVFLDKTVQGFSSYTKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...TGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TTACTGGAACTTCCAAGGACCTGTAATCCCAATATTGTGAGAGGCCAAGGTGGGGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: LLELPRTCNPNIVRGQGGVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...CCCACCTTGGCCTCTCACAATATTGGGATTACAGGTCCTTGGAAGTTCCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
CDS-3UTR TCA 90 bp CAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGCTTTATTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: QTGNSCPSRILFWLWAALFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...TAAAGCTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp AGCACCTCCTGCAGTCCTGGAGGGAAAAGGGACAGTAACATGAAGTGTCTGAAGAATATTACATGCTTATaGAATGCTGCAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: STSCSPGGKRDSNMKCLKNITCL*NAADRE
Trigger: TTCCCTGTCTGCAGCATTTCATAAGCATGTAATATT...CTTCAGACACTTCATGTTACTGTCCCTTTTCCCTCCAGGACTGCAGGAGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp AAATGCTGCAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGAATATTACATGCTTATaGAATGCTGCAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: KCCRQGIPVLLGSSSGCGNITCL*NAADRE
Trigger: TTCCCTGTCTGCAGCATTTCATAAGCATGTAATATT...CCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTGCAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp GTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGAAGCCAAACGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: VALRMQMQDMNSNDKKPNDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...GTTTGGCTTCTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACGATGCTTGCACAGGATaGTGTCACTCTTCCGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPSIICQSTACQRHLAADDACTG*CHSSVA
Trigger: TGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATC...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: CHSSVALRMQMQDMNSNDLTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...GTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCAAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: RLRDWLRVFLDKTVQGFSNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...TGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp CAGACAGGGAATTCCTGTCCTTCTAGGATCCTCTTCTGGCTGTGGGCAGCTTTATGTAAAGATCAGAAGTaGAGAGTGAAACCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QTGNSCPSRILFWLWAALCKDQK*RVKPVL
Trigger: AAGAACTGGTTTCACTCTGCACTTCTGATCTTTACA...TAAAGCTGCCCACAGCCAGAAGAGGATCCTAGAAGGACAGGAATTCCCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp AGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTCCACTGACTCAGGTAAACTaGCAAGAGATGCTTGCACTG +
Preference number: 4 (lower is better)
Translates to: RVFLDKTVQGFSSYTNPPLTQVN*QEMLAL
Trigger: CAGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...TGGAGGGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486655.5
CDS-3UTR CCA 90 bp AAAAGGGACAGTAACATGAAGTGTCTGAAGATCCATTTCACCTCTTTTCCATGTACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KRDSNMKCLKIHFTSFPCTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...ACATGGAAAAGAGGTGAAATGGATCTTCAGACACTTCATGTTACTGTCCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399277.6
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR CCA 90 bp CGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: RLRDWLRVFLDKTVQGFSMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp AAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: KRLRDWLRVFLDKTVQGFMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...GAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp TGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: CLHRMLSLFRSTENANAGMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp TGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CHSSVALRMQMQDMNSNDKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...GTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp AGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTCCAAAGCGTCTCAGAGACTaGCTCAGGGTATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RVFLDKTVQGFSSYTNPPKRLRD*LRVFLD
Trigger: GTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTT...TGGAGGGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp GAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACAGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: ETGSGYFLTRLYRASHHTVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...TGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: SETGSGYFLTRLYRASHHVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...ATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp AGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACCACCTCTTTTCCATGTaGATCATGACGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: RDWLRVFLDKTVQGFSSYHLFSM*IMTLSM
Trigger: CATTGAAAGCGTCATGATTCACATGGAAAAGAGGTG...GTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACATCAGAAGTGCAGAGTaGAACCAGTTCTTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNIRSAE*NQFFPC
Trigger: ACAAGGGAAGAACTGGTTTCACTCTGCACTTCTGAT...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp ACAGGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: TGPHNLTQVNCQEMLAQDNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...ATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGTATTATTGCTTCTTTaGTCTCTCGGTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: KRCLHRMLSLFRSTENANVLLLL*SLGVQL
Trigger: CAGTTGGACACCGAGAGAGCAAAGAAGCAATAATAC...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp CACCTATATCATCTGTCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCTGCAATCTTCACGTATTATTaGTTCTTTGCTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HLYHLSVHCFNSFCSIPAIFTYY*FFALSV
Trigger: CACCGAGAGAGCAAAGAAGCAATAATACGTGAAGAT...TGCAGGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGACAGATGATATAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp GTAGCACTGAGAATGCAAATGCAGGACATGAACAGTAATGACAAGAAGCCAAACACCCACAGCACCTCCTaGAGTCCTTTTATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VALRMQMQDMNSNDKKPNTHSTS*SPFMLL
Trigger: AAGAAGCATAAAAGGACTGCAGGAGGTGCTGTGGGT...GTTTGGCTTCTTGTCATTACTGTTCATGTCCTGCATTTGCATTCTCAGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp AGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: RCLHRMLSLFRSTENANAMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp TCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCTCTAGGATCCTCTTCTaGCTGTGGGCAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: STPSAVSLQQYYMLMKCCSRILF*LWAALP
Trigger: TGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAGA...GCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp GGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTATGTGTATGTTTTACTaGAACTTCCAAGGACCTGTA +
Preference number: 4 (lower is better)
Translates to: GPHNLTQVNCQEMLAQDAMCMFY*NFQGPV
Trigger: TACAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...AGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
CDS-3UTR TCA 90 bp AGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCCTCCAGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: RVFLDKTVQGFSSYTNPPVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...TGGAGGGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp GTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: VSETGSGYFLTRLYRASHFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...ATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399277.6
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp TTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACATTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: LHRMLSLFRSTENANAGHFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...ATGTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460252.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR TCA 90 bp GTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATAGCATCACAGATATTTaGAGCTTACAGAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: VSETGSGYFLTRLYRASHSITDI*SLQKPE
Trigger: TTCTGGTTTCTGTAAGCTTCAAATATCTGTGATGCT...ATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp TCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SSPSIICQSTACQRHLAALTQVN*QEMLAQ
Trigger: CTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAG...AGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: RDWLRVFLDKTVQGFSSYNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: KRCLHRMLSLFRSTENANNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp GGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: GSGYFLTRLYRASHHTQTNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp GGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCGTCTGTTCCTTCAATTaGCCTGTTGTAAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: GSGYFLTRLYRASHHTQTVCSFN*PVVKIR
Trigger: TCTGATCTTTACAACAGGGCAATTGAAGGAACAGAC...GGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp TCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATGCTGAAGTATTATTGCTTCTTTaGTCTCTCGGTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SSSGCGQLYHKFLSSYAEVLLLL*SLGVQL
Trigger: CAGTTGGACACCGAGAGAGCAAAGAAGCAATAATAC...TTCAGCATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp GGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACCATCTTCACGTATTATTaGTTCTTTGCTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSGYFLTRLYRASHHTQTIFTYY*FFALSV
Trigger: CACCGAGAGAGCAAAGAAGCAATAATACGTGAAGAT...GGTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR GCA 90 bp TCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATATCTTCACGTATTATTaGTTCTTTGCTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SETGSGYFLTRLYRASHHIFTYY*FFALSV
Trigger: CACCGAGAGAGCAAAGAAGCAATAATACGTGAAGAT...ATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR CCA 90 bp ATGAACAGTAATGACAAGAAGCCAAACATGTGTATGTTTTACTGGAACTTCCAAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MNSNDKKPNMCMFYWNFQTRSKA*VADEPK
Trigger: CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGT...TTGGAAGTTCCAGTAAAACATACACATGTTTGGCTTCTTGTCATTACTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CCA 90 bp GAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: ETGSGYFLTRLYRASHHTMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR TCA 90 bp GATTTCATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: DFIFIFTYYCFFALSVSNAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...GTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR CCA 90 bp ACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: TGSGYFLTRLYRASHHTQMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
CDS-3UTR CCA 90 bp GACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACACTACTTAAGCTGTTTTaGCACAAGCATCACAGATAT +
Preference number: 4 (lower is better)
Translates to: DWLRVFLDKTVQGFSSYTLLKLF*HKHHRY
Trigger: ATATCTGTGATGCTTGTGCCAAAACAGCTTAAGTAG...TGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp CATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACTGAGTGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: HFHLHVLLLLCSLGVQLSVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...ACTCAGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR TCA 90 bp TCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGTGATGAGATTAAGGTaGTGGACTGTCGATCAACTA +
Preference number: 4 (lower is better)
Translates to: SSPSIICQSTACQRHLAAVMRLR*WTVDQL
Trigger: TAGTTGATCGACAGTCCATCACCTTAATCTCATCAC...AGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTGCTCAGGGTATTTCTTaGCAAGACTGTACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SCFFSINNMSVNCLSETLAQGIS*QDCTGL
Trigger: AAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGC...AAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR TCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACAATATTACATGCTTATaGAATGCTGCAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNNITCL*NAADRE
Trigger: TTCCCTGTCTGCAGCATTTCATAAGCATGTAATATT...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR TCA 90 bp TTTATGCTTCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGGTAATCCCAATATTGTaGGAGGCCAAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FMLLVSSPSIICQSTACQVIPIL*EAKVGG
Trigger: TCCTCCCACCTTGGCCTCTCACAATATTGGGATTAC...CTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGAAGCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486655.5
ENST00000486706.6
ENST00000585208.5
CDS-3UTR GCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: SPSIICQSTACQRHLAADNMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACAAGTCTTTTCATACCTaGTACTGTTTAGCCACATCT +
Preference number: 4 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNKSFHT*YCLATS
Trigger: AGATGTGGCTAAACAGTAGCAGGTATGAAAAGACTT...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp TCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCATGCTTATGAAATGCTaGAGACAGGGAATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: STPSAVSLQQYYMLMKCCMLMKC*RQGIPV
Trigger: GACAGGAATTCCCTGTCTGCAGCATTTCATAAGCAT...GCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp AGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCAGACAGGGAATTCCATGCTTATGAAATGCTaGAGACAGGGAATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SIPATILHAYEMLQTGNSMLMKC*RQGIPV
Trigger: GACAGGAATTCCCTGTCTGCAGCATTTCATAAGCAT...GGAATTCCCTGTCTGCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR GCA 90 bp TCTGTCCACTGCTTCAACTCCTTCTGCAGTATCCCTGCAACAATATTACATGCTGTCTGTTCCTTCAATTaGCCTTTTATGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SVHCFNSFCSIPATILHAVCSFN*PFMLLV
Trigger: AACAAGAAGCATAAAAGGGCAATTGAAGGAACAGAC...AGCATGTAATATTGTTGCAGGGATACTGCAGAAGGAGTTGAAGCAGTGGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476496.5
CDS-3UTR CCA 90 bp CATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACTGAGTTGCTCAATAGTTTCCTaGACCCAAGGAAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: HFHLHVLLLLCSLGVQLSCSIVS*TQGKEL
Trigger: CAGTTCTTTTCCTTGGGTCCAGGAAACTATTGAGCA...ACTCAGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR GCA 90 bp CACAGCACCTCCTGCAGTCCTTTTATGCTTCTTGTTTCTTCTCCATCAATAATAAATATGTCAGTCAACTaGTTGTCAGAGACACTTAGC +
Preference number: 4 (lower is better)
Translates to: HSTSCSPFMLLVSSPSIINMSVN*LSETLS
Trigger: GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATT...TATTATTGATGGAGAAGAAACAAGAAGCATAAAAGGACTGCAGGAGGTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR GCA 90 bp TATTTGAAGCTTACAGAAACCAGAACCTCTAAGTCTTTTCATACCTGCTACTGTCTGATCTTCTGTTGCTaGTCAATAGTTTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: YLKLTETRTSKSFHTCYCLIFCC*SIVSWT
Trigger: GGTCCAGGAAACTATTGAGCAGCAACAGAAGATCAG...ACAGTAGCAGGTATGAAAAGACTTAGAGGTTCTGGTTTCTGTAAGCTTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR CCA 90 bp CACAGCACCTCCTGCAGTCCTTTTATGCTTCTTGTTTCTTCTCCATCAATAATAATGTGTATGTTTTACTaGAACTTCCAAGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: HSTSCSPFMLLVSSPSIIMCMFY*NFQGPG
Trigger: ACCAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...TATTATTGATGGAGAAGAAACAAGAAGCATAAAAGGACTGCAGGAGGTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460315.5
ENST00000474716.5
ENST00000490395.5
ENST00000584519.5
CDS-3UTR CCA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACATGTGTATGTTTTACTaGAACTTCCAAGGACCTGTA +
Preference number: 4 (lower is better)
Translates to: SPSIICQSTACQRHLAADMCMFY*NFQGPV
Trigger: TACAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486706.6
ENST00000585208.5
3UTR CAA 72 bp TTGATTTCATTTTCATCTTCACGTATTATTGCTTCTTaGCTCTCTCGGTGTCCAACTGAGTCTCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: LISFSSSRIIAS*LSRCPTESHRS
Trigger: AGAGCGATGAGACTCAGTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CCA 90 bp TATTTGAAGCTTACAGAAACCAGAACCTCTAAGTCTTTTCATACCTGCTACTGTCTTCATCTTACTGTTTaGCCCACCATTCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: YLKLTETRTSKSFHTCYCLHLTV*PTIPTF
Trigger: AAAGGTTGGAATGGTGGGCCAAACAGTAAGATGAAG...ACAGTAGCAGGTATGAAAAGACTTAGAGGTTCTGGTTTCTGTAAGCTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR CCA 90 bp TTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCATGTGTATGTTTTACTaGAACTTCCAAGGACCTGTA +
Preference number: 4 (lower is better)
Translates to: FFSINNMSVNCLSETLSCMCMFY*NFQGPV
Trigger: TACAGGTCCTTGGAAGTTCCAGTAAAACATACACAT...GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486706.6
ENST00000585208.5
3UTR CAA 72 bp AGAACTGACCTACTCGTCGAAACTTCATCTTACTGTTaGGCCCACCATTCCAACCTTTTAAAAATTACTAGT +
Preference number: 4 (lower is better)
Translates to: RTDLLVETSSYC*AHHSNLLKITS
Trigger: ACTAGTAATTTTTAAAAGGTTGGAATGGTGGGCCAAACAGTAAGATGAAGTTTCGACGAGTAGGTCAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399277.6
3UTR CAA 72 bp AAAGATCAGAAGTGCAGAGTGAAACCAGTTCTTCCCTaGTTCTCGATACTAACTCTCAAACAATACAGTCTA +
Preference number: 4 (lower is better)
Translates to: KDQKCRVKPVLP*FSILTLKQYSL
Trigger: TAGACTGTATTGTTTGAGAGTTAGTATCGAGAACAAGGGAAGAACTGGTTTCACTCTGCACTTCTGATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS-3UTR TCA 90 bp TGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTTTCCATGTGAATCATaGCGCTTTCAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: CFFSINNMSVNCLSETLSFPCES*RFQCIS
Trigger: AGAAATGCATTGAAAGCGTCATGATTCACATGGAAA...GCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460252.5
ENST00000486655.5
ENST00000486706.6
ENST00000491631.5
CDS-3UTR GCA 90 bp TTTATGCTTCTTGTTTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGGTATTATTGCTTCTTTaGTCTCTCGGTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: FMLLVSSPSIICQSTACQVLLLL*SLGVQL
Trigger: CAGTTGGACACCGAGAGAGCAAAGAAGCAATAATAC...CTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAAACAAGAAGCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
3UTR CAA 72 bp CTACTTAAGCTGTTTTGGCACAAGCATCACAGATATTaGAAGCTTACAGAAACCAGAACCTCTAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLKLFWHKHHRY*KLTETRTSKSF
Trigger: AAAAGACTTAGAGGTTCTGGTTTCTGTAAGCTTCAAATATCTGTGATGCTTGTGCCAAAACAGCTTAAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS CCA 90 bp GATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAGAGAAACTTCAGCCTCGGTCCCGTA +
Preference number: 5 (lower is better)
Translates to: DEIKVMDCRSTRSKA*VADEPKRNFSLGPV
Trigger: TACGGGACCGAGGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579955.1
CDS CCA 90 bp GATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCTaGGTGGCTGATGAGCCAAAGAGAAACTTCAGCTTCGCGCGCTCT +
Preference number: 5 (lower is better)
Translates to: DEIKVMDCRSTRSKA*VADEPKRNFSFARS
Trigger: AGAGCGCGCGAAGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584519.5
CDS-3UTR CAA 90 bp GTGATGGACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: VMDCRSTRSKAWVADEPKMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...CTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp AGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGCCAACCACAGAACATaGCAACACCTAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: RCLHRMLSLFRSTENANAANHRT*QHLGPG
Trigger: CCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGC...TGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp ATTGCAACACCTAGGCCCTGGGCTTTCCCCCAGCATTCATTCACTAGCACCTCAAGTCTGTTCCTTCAATaGCCCTGTAGTCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: IATPRPWAFPQHSFTSTSSLFLQ*PCSPSY
Trigger: GTAGCTGGGACTACAGGGCAATTGAAGGAACAGACT...TGAGGTGCTAGTGAATGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490395.5
CDS-3UTR CAA 90 bp GACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: DSGKLPRDACTGCCHSSVTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...TACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp CGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCAACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: RLRDWLRVFLDKTVQGFSTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...TGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp ATTGCAACACCTAGGCCCTGGGCTTTCCCCCAGCATTCATTCACTAGCACCTCAATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: IATPRPWAFPQHSFTSTSMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...TGAGGTGCTAGTGAATGAATGCTGGGGGAAAGCCCAGGGCCTAGGTGTTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATCTAGCACCTCATGTTTaGGGGGCACAAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: KRCLHRMLSLFRSTENANLAPHV*GAQAQG
Trigger: GCCCTGTGCTTGTGCCCCCAAAACATGAGGTGCTAG...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCCAACCACAGAACATaGCAACACCTAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: KRCLHRMLSLFRSTENANANHRT*QHLGPG
Trigger: CCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGC...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp ACAAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: TKQKASANHRTLQHLGPGTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...CCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp CCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTGTCACTCTTCCATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PDSGKLPRDACTGCCHSSMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...GGAAGAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp ACTGTCGATCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACTATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: TVDQLGPRPGWLMSQRETMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...AGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGATCGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp CCACTGGGTGATGAGATTAAGGTGATGGACTGTCGATCAACTAGGTCCAAGGCCATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PLGDEIKVMDCRSTRSKAMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...GGCCTTGGACCTAGTTGATCGACAGTCCATCACCTTAATCTCATCACCCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp TCAACTAGGTCCAAGGCCTGGGTGGCTGATGAGCCAAAGAGAAACTTCAGCCTTATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: STRSKAWVADEPKRNFSLMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...AAGGCTGAAGTTTCTCTTTGGCTCATCAGCCACCCAGGCCTTGGACCTAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585208.5
CDS-3UTR CAA 90 bp CTAGGATCCTCTTCTGGCTGTGGGCAGCTTTACCATAAGTTCTTGTCTTCTTATCTAGCACCTCATGTTTaGGGGGCACAAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: LGSSSGCGQLYHKFLSSYLAPHV*GAQAQG
Trigger: GCCCTGTGCTTGTGCCCCCAAAACATGAGGTGCTAG...ATAAGAAGACAAGAACTTATGGTAAAGCTGCCCACAGCCAGAAGAGGATCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp TGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATACACAAACGCCAACCACAGAACATaGCAACACCTAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: WLRVFLDKTVQGFSSYTNANHRT*QHLGPG
Trigger: CCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGC...GTTTGTGTATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR CAA 90 bp AAGAGATGCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: KRCLHRMLSLFRSTENANTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...ATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGCATCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp GGTCCTCATAACCTGACTCAGGTAAACTGCCAAGAGATGCTTGCACAGGATGCTATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: GPHNLTQVNCQEMLAQDAMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...AGCATCCTGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000579955.1
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp CGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTCGTATTATTGCTTCTTaGCTCTCTCGGTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: RSVSETGSGYFLTRLYRARIIAS*LSRCPT
Trigger: AGTTGGACACCGAGAGAGCAAAGAAGCAATAATACG...AGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399277.6
ENST00000490395.5
CDS-3UTR CAA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACCTAGCACCTCATGTTTaGGGGGCACAAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SPSIICQSTACQRHLAADLAPHV*GAQAQG
Trigger: GCCCTGTGCTTGTGCCCCCAAAACATGAGGTGCTAG...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp TCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCTGACACTGCCAAGAGATGCTaGCACAGGATGCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SPSIICQSTACQRHLAADTAKRC*HRMLSL
Trigger: GAGTGACAGCATCCTGTGCAAGCATCTCTTGGCAGT...GTCAGCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp TCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGGCTTCTCATCATATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: SETGSGYFLTRLYRASHHMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...ATGATGAGAAGCCCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000399277.6
ENST00000460315.5
ENST00000472495.5
ENST00000474716.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS-3UTR CAA 90 bp ACAAAACAAAAAGCATCTGCCAACCACAGAACATTGCAACACCTAGGCCCTGGGCGTATTATTGCTTCTTaGCTCTCTCGGTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: TKQKASANHRTLQHLGPGRIIAS*LSRCPT
Trigger: AGTTGGACACCGAGAGAGCAAAGAAGCAATAATACG...CCCAGGGCCTAGGTGTTGCAATGTTCTGTGGTTGGCAGATGCTTTTTGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp GCTTGCACAGGATGCTGTCACTCTTCCGTAGCACTGAGAATGCAAATGCAGGACAGTCTGTTCCTTCAATaGCCCTTTTATGCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: ACTGCCHSSVALRMQMQDSLFLQ*PFYASC
Trigger: ACAAGAAGCATAAAAGGGCAATTGAAGGAACAGACT...GTCCTGCATTTGCATTCTCAGTGCTACGGAAGAGTGACAGCATCCTGTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476496.5
CDS-3UTR CAA 90 bp TACCGAAGCGTCTCAGAGACTGGCTCAGGGTATTTCTTGACAAGACTGTACAGGACTGCCAAGAGATGCTaGCACTGTAATCCCAATATT +
Preference number: 5 (lower is better)
Translates to: YRSVSETGSGYFLTRLYRTAKRC*HCNPNI
Trigger: AATATTGGGATTACAGTGCAAGCATCTCTTGGCAGT...CCTGTACAGTCTTGTCAAGAAATACCCTGAGCCAGTCTCTGAGACGCTTCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486655.5
CDS-3UTR CAA 90 bp TTCTTCTCCATCAATAATATGTCAGTCAACTGCTTGTCAGAGACACTTAGCTGCATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: FFSINNMSVNCLSETLSCMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACATATTATTGATGGAGAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000460252.5
ENST00000460315.5
ENST00000474716.5
ENST00000476496.5
ENST00000486655.5
ENST00000486706.6
ENST00000490395.5
ENST00000491631.5
ENST00000584519.5
ENST00000585208.5
CDS TCA 90 bp GATGATTGCGTTGAATCTGATGTCAGAGAACACAGCTTTAGATCTTaGAGGGGTTTTGGTTCAATCCTGTCTCTTGCAGTTGAGATACAC +
Preference number: 5 (lower is better)
Translates to: DDCVESDVREHSFRS*RGFGSILSLAVEIH
Trigger: GTGTATCTCAACTGCAAGAGACAGGATTGAACCAAAACCCCTTCAAGATCTAAAGCTGTGTTCTCTGACATCAGATTCAACGCAATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497434.6
CDS-3UTR CAA 90 bp GATTTCATTTTCATCTTCACGTATTATTGCTTCTTTGCTCTCTCGGTGTCCAACATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: DFIFIFTYYCFFALSVSNMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...GTTGGACACCGAGAGAGCAAAGAAGCAATAATACGTGAAGATGAAAATGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp CATGTGTATGTTTTACTGGAACTTCCAAGGACCTGTAATCCCAATATTGTGAGAATGTCAGTCAACTGCTaGTCAGAGACACTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: HVYVLLELPRTCNPNIVRMSVNC*SETLSC
Trigger: GCAGCTAAGTGTCTCTGACAAGCAGTTGACTGACAT...TCTCACAATATTGGGATTACAGGTCCTTGGAAGTTCCAGTAAAACATACACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486706.6
ENST00000579955.1
ENST00000585208.5
CDS-3UTR CAA 90 bp AGTATCCCTGCAACAATATTACATGCTTATGAAATGCTGCAGACAGGGAATTCCCGTATTATTGCTTCTTaGCTCTCTCGGTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: SIPATILHAYEMLQTGNSRIIAS*LSRCPT
Trigger: AGTTGGACACCGAGAGAGCAAAGAAGCAATAATACG...GGAATTCCCTGTCTGCAGCATTTCATAAGCATGTAATATTGTTGCAGGGATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399277.6
ENST00000476496.5
ENST00000490395.5
CDS-3UTR CAA 90 bp AGAGTGAAACCAGTTCTTCCCTTGTTCTCGATACTAACTCTCAAACAATACAGTAAACCAGTTCTTCCCTaGTTCTCGATACTAACTCTC +
Preference number: 5 (lower is better)
Translates to: RVKPVLPLFSILTLKQYSKPVLP*FSILTL
Trigger: GAGAGTTAGTATCGAGAACAAGGGAAGAACTGGTTT...ACTGTATTGTTTGAGAGTTAGTATCGAGAACAAGGGAAGAACTGGTTTCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399277.6
CDS GCA 72 bp CTGCTGACAGGTCCTCATAACCTGACTCAGGTAAACTaGCAAGAGATGCTTGCACTCTGGGGAGATGATTGC +
Preference number: 6 (lower is better)
Translates to: LLTGPHNLTQVN*QEMLALWGDDC
Trigger: GCAATCATCTCCCCAGAGTGCAAGCATCTCTTGGCAGTTTACCTGAGTCAGGTTATGAGGACCTGTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497434.6
CDS CAA 72 bp GCCAAGAGATGCTTGCACTCTGGGGAGATGATTGCGTaGAATCTGATGTCAGAGAACACAGCTTTAGATCTT +
Preference number: 6 (lower is better)
Translates to: AKRCLHSGEMIA*NLMSENTALDL
Trigger: AAGATCTAAAGCTGTGTTCTCTGACATCAGATTCAACGCAATCATCTCCCCAGAGTGCAAGCATCTCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497434.6
CDS TCA 72 bp TTGAAGGGGTTTTGGTTCAATCCTGTCTCTTGCAGTTaGGATACACTTAGGGCACATCAGTTACGAATGTGG +
Preference number: 6 (lower is better)
Translates to: LKGFWFNPVSCS*DTLRAHQLRMW
Trigger: CCACATTCGTAACTGATGTGCCCTAAGTGTATCTCAACTGCAAGAGACAGGATTGAACCAAAACCCCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497434.6
CDS TCA 72 bp GTTGAATCTGATGTCAGAGAACACAGCTTTAGATCTTaGAGGGGTTTTGGTTCAATCCTGTCTCTTGCAGTT +
Preference number: 6 (lower is better)
Translates to: VESDVREHSFRS*RGFGSILSLAV
Trigger: AACTGCAAGAGACAGGATTGAACCAAAACCCCTTCAAGATCTAAAGCTGTGTTCTCTGACATCAGATTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497434.6