Pregenerated sensors for ZSWIM5 (Homo sapiens)
Ensembl gene IDs: ENSG00000162415Ensembl transcript IDs: ENST00000359600.6, ENST00000464588.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGGCCCAGCTCCTCCATaGACAGTAGGCTGTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSGPAPP*TVGCSQ Trigger: CTGACTACAGCCTACTGTTCATGGAGGAGCTGGGCC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAGGATATAGGGGCATaGGGTGGCATGTTGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQDIGA*GGMLWG Trigger: ACCCCACAACATGCCACCTCATGCCCCTATATCCTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCCTGAAGAGGCTGTGTaGGGCAGGAGCTTCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSPEEAV*GRSFNV Trigger: GACATTGAAGCTCCTGCCTCACACAGCCTCTTCAGG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGGCCTCATCCACAGGTaGTCAGAGTTCTCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSGLIHR*SEFSQG Trigger: ACCCTGAGAGAACTCTGAGCACCTGTGGATGAGGCC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCCCCCACTCTTCCACTaGTACCAGCAAACACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSPPLFH*YQQTLC Trigger: GCAGAGTGTTTGCTGGTAGCAGTGGAAGAGTGGGGG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTATAGGGGCATGAGGTaGCATGTTGTGGGGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSYRGMR*HVVGFL Trigger: CAGAAACCCCACAACATGCCACCTCATGCCCCTATA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGTGCACAAACAGGCATaGACAGATGTATCTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSVHKQA*TDVSMY Trigger: GTACATAGATACATCTGTGCATGCCTGTTTGTGCAC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTACACACAATTATAGATaGAACCACACACTTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SSHVHKMCISSRRNSQSSTHNYR*NHTLAN Trigger: GTTAGCAAGTGTGTGGTTTCATCTATAATTGTGTGT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| 3UTR-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTATCTTCTCCCTGCACTaGTTTCTCAGGTGTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSHVHKMCISSRRNSQSSIFSLH*FLRCSA Trigger: TGCTGAACACCTGAGAAACAAGTGCAGGGAGAAGAT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGCCTGCAGGGTAGCGTaGGGCGGCGCGCGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSACRVA*GGARCP Trigger: AGGACACCGCGCGCCGCCTCACGCTACCCTGCAGGC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCGAGGACCAGGCAGCTaGTGCCGACGCCCCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSRGPGS*CRRPLP Trigger: GGGCAGGGGGCGTCGGCAGCAGCTGCCTGGTCCTCG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGAATCCGGCTGCAGGTaGGGGCGGGCCCCGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSESGCR*GRAPRT Trigger: GGTCCTCGGGGCCCGCCCCCACCTGCAGCCGGATTC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTGGGGACTGACTGACTaGCTGAGGCGGCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSWGLTD*LRRRRL Trigger: CAGCCGCCGCCGCCTCAGTCAGTCAGTCAGTCCCCA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGCCGGAGAGACCGGTaGCGGCGAGAGCAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSSRRDR*RREQLL Trigger: GAGGAGCTGCTCTCGCCGTCACCGGTCTCTCCGGCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTGTCCAGCAGACGGATaGCCCGGCGGAACGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSCPADG*PGGTGA Trigger: GGCTCCCGTTCCGCCGGGGCATCCGTCTGCTGGACA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTTGCTGGGGACTGACTaGCTGACTGAGGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSLLGTD*LTEAAA Trigger: CGCCGCCGCCTCAGTCAGTCAGTCAGTCCCCAGCAA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGGACCAGTAGACGATaGGGCGCTGCACGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSRTSRR*GAARAP Trigger: CGGAGCCCGTGCAGCGCCGCATCGTCTACTGGTCCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGATGAGCCTGCGGGCTaGGCCACGAACACTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSDEPAG*ATNTAA Trigger: AGCGGCAGTGTTCGTGGCCCAGCCCGCAGGCTCATC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTACCAACCCATTGGGCTaGGACGTAGGGGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSTNPLG*DVGALG Trigger: GCCAAGGGCCCCTACGTCTCAGCCCAATGGGTTGGT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCTGGGCCACGAACACTaGCGCTTAGCCGGAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSLGHEH*RLAGET Trigger: GGTCTCTCCGGCTAAGCGGCAGTGTTCGTGGCCCAG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGGGCCGCCCCGGTACTaGAAGCTGGAGTACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSGPPRY*KLEYMQ Trigger: CTGCATGTACTCCAGCTTCCAGTACCGGGGCGGCCC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCCAATGAGGCCAGCTTaGAGGCACGTAGCGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSPMRPA*RHVAGS Trigger: GCTACCCGCTACGTGCCTTCAAGCTGGCCTCATTGG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTTTCCGCCACCGTCTTaGCGGCGCAGTCCAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSFPPPS*RRSPVR Trigger: CCTTACTGGACTGCGCCGCCAAGACGGTGGCGGAAA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGGCTGCTCTGGCAGTaGGCTATCTGCTCTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSRLLWQ*AICSLS Trigger: GCTGAGAGAGCAGATAGCTCACTGCCAGAGCAGCCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCTCCACCCGTTCGTATaGCCACTTTTCCGCCACCGT | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSLHPFV*PLFRHR Trigger: ACGGTGGCGGAAAAGTGGGCATACGAACGGGTGGAG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTACGGATCCTGTAGAGTaGGAGTGCTACCACATGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSTDPVE*ECYHMG Trigger: GCCCATGTGGTAGCACTCTCACTCTACAGGATCCGT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGGCATTAACCTCTGTTaGCCCAGGCCCATCAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSGINLC*PRPISA Trigger: TGCACTGATGGGCCTGGGTCAACAGAGGTTAATGCC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGCACTGTGGCACAGTaGACACTCTTCACCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSSTVAQ*TLFTTR Trigger: CCTGGTGGTGAAGAGTGTGCACTGTGCCACAGTGCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCCCGGTACTGGAAGCTaGAGTACATGCAGATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSPGTGS*STCRSP Trigger: GGGAGATCTGCATGTACTCCAGCTTCCAGTACCGGG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCTGGTTCAGAGGCAGTaGCCAGCTCAGTTACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSLVQRQ*PAQLLC Trigger: GCACAGTAACTGAGCTGGCCACTGCCTCTGAACCAG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGGAAGCTGGAGTACATaGAGATCTCCCGCTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSGSWST*RSPAHS Trigger: GGAATGAGCGGGAGATCTGCATGTACTCCAGCTTCC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAGGTGCAGTCACTGTaGAGCGTCGTAAGATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQVQSL*SVVRCL Trigger: CAGACATCTTACGACGCTGCACAGTGACTGCACCTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGCGAGGATAACGGCTaGGCACCACAGACACCATAT | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSSEDNG*APQTPY Trigger: ATATGGTGTCTGTGGTGCCCAGCCGTTATCCTCGCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTGTGGCATCCAGCAACTaGCGCAATGGAGCTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSVASSN*RNGALS Trigger: TGACAAAGCTCCATTGCGCCAGTTGCTGGATGCCAC...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCCAGCTCAGTTACTGTaGCACTCAGATGAAAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSPAQLL*HSDESR Trigger: TCGGCTTTCATCTGAGTGGCACAGTAACTGAGCTGG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAGCAACTGGCGCAATaGAGCTTTGTCAGTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQQLAQ*SFVSGH Trigger: ATGTCCACTGACAAAGCTCCATTGCGCCAGTTGCTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTACAGCCACATGTCACTaGGGTGATTTTGCATCGATC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSTATCH*GDFASI Trigger: GATCGATGCAAAATCACCTCAGTGACATGTGGCTGT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTTTATAAGTCACTGCTaGTTCAGAGGCAGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSFISHC*FRGSGQ Trigger: CTGGCCACTGCCTCTGAACCAGCAGTGACTTATAAA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR TCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCTGGACAGTAAGACTTaGGTAGCCACAAATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSLDSKT*VATNGK Trigger: TTTGCCATTTGTGGCTACTCAAGTCTTACTGTCCAG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGACGCAATTTGACTTaGTCTGGTTTACGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSRRNLT*SGLRIL Trigger: CAGGATCCGTAAACCAGACCAAGTCAAATTGCGTCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTACTCACAGTCCAGTGTaGACATATTCAAACAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSTHSPV*TYSNRY Trigger: GTACCTGTTTGAATATGTGCACACTGGACTGTGAGT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAATTTGACTTGGTCTaGTTTACGGATCCTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQFDLV*FTDPVE Trigger: CTCTACAGGATCCGTAAACCAGACCAAGTCAAATTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTATGCACAAACATGAGTaGATTTGCACAAAGATGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSMHKHE*ICTKMC Trigger: GCACATCTTTGTGCAAATGCACTCATGTTTGTGCAT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTATTTGCACAAAGATGTaGATCCTCACATGTACACAA | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSICTKM*ILTCTQ Trigger: TTGTGTACATGTGAGGATGCACATCTTTGTGCAAAT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR GCA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTCGATCAAAACTGATTaGAACTTTATAAGTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: SSHVHKMCISSRRNSQSSSIKTD*NFISHC Trigger: GCAGTGACTTATAAAGTTGCAATCAGTTTTGATCGA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS GCA 90 bp | GAGGACCAGGCAGCTGCTGCCGACGCCCCCTGCCCCTCCGCCGGCTaGCCCAGGCGAACCGCGAGGGTGATGAGCCTGCGGGCTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: EDQAAAADAPCPSAG*PRRTARVMSLRAGP Trigger: TGGCCCAGCCCGCAGGCTCATCACCCTCGCGGTTCGCCTGGGGCAGCCGGCGGAGGGGCAGGGGGCGTCGGCAGCAGCTGCCTGGTCCTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS GCA 90 bp | CGACTTGCAGCACGTTCTCCACGGAGCCGCTGTCCAGCAGACGGATaGCCCGGCGGAACGGGAGCCCCTCGCCACCGCAGCCGGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RLAARSPRSRCPADG*PGGTGAPRHRSRPR Trigger: GCGCGGCCGGCTGCGGTGGCGAGGGGCTCCCGTTCCGCCGGGGCATCCGTCTGCTGGACAGCGGCTCCGTGGAGAACGTGCTGCAAGTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS TCA 90 bp | CTGCGGGCTGGGCCACGAACACTGCCGCTTAGCCGGAGAGACCGGTaGCGGCGAGAGCAGCTCCTCTCGCTCACCTCCGTCCGCCATTGC | + |
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Preference number: 5 (lower is better) Translates to: LRAGPRTLPLSRRDR*RREQLLSLTSVRHC Trigger: GCAATGGCGGACGGAGGTGAGCGAGAGGAGCTGCTCTCGCCGTCACCGGTCTCTCCGGCTAAGCGGCAGTGTTCGTGGCCCAGCCCGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS GCA 90 bp | AGTAAGGGGAGCGGCCCGGCGAGCCGCCGCGCCTGGGTTAAGAGCTaGAGGAGGAACGTGGCTTCACGAGTTCGGCTCCTCGGCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: SKGSGPASRRAWVKS*RRNVASRVRLLGHP Trigger: TGGATGGCCGAGGAGCCGAACTCGTGAAGCCACGTTCCTCCTGCAGCTCTTAACCCAGGCGCGGCGGCTCGCCGGGCCGCTCCCCTTACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464588.1 |
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| CDS CCA 90 bp | AAGCGGTTTCGGAGTAAGGGGAGCGGCCCGGCGAGCCGCCGCGCCTaGGTTAAGAGCTGCAGGAGGAACGTGGCTTCACGAGTTCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KRFRSKGSGPASRRA*VKSCRRNVASRVRL Trigger: GAGCCGAACTCGTGAAGCCACGTTCCTCCTGCAGCTCTTAACCCAGGCGCGGCGGCTCGCCGGGCCGCTCCCCTTACTCCGAAACCGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464588.1 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTTTTCCGCCACCGTCTaGGCGGCGCAGTCCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSFSATV*AAQSSK Trigger: CTTACTGGACTGCGCCGCCAAGACGGTGGCGGAAAA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAGATGAAAGCCGACTaGCAGCACGTTCTCCACGGA | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQMKAD*QHVLHG Trigger: TCCGTGGAGAACGTGCTGCAAGTCGGCTTTCATCTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS CCA 90 bp | GATTTTGCATCGATCAAAACTGATTGCAACTTTATAAGTCACTGCTaGTTCAGAGGCAGTGGCCAGCTCAGTTACTGTGCCACTCAGATG | + |
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Preference number: 5 (lower is better) Translates to: DFASIKTDCNFISHC*FRGSGQLSYCATQM Trigger: CATCTGAGTGGCACAGTAACTGAGCTGGCCACTGCCTCTGAACCAGCAGTGACTTATAAAGTTGCAATCAGTTTTGATCGATGCAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000359600.6 ENST00000464588.1 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTCAGAGCTGCCTGCACTaGTCTGTCATGTTTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSQSCLH*SVMFVP Trigger: AGGAACAAACATGACAGACAAGTGCAGGCAGCTCTG...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTTGGCGCAATGGAGCTTaGTCAGTGGACATGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSWRNGA*SVDMSF Trigger: AAAGCTCATGTCCACTGACAAAGCTCCATTGCGCCA...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAAGACGCAATTTGACTaGGTCTGGTTTACGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSKTQFD*VWFTDP Trigger: AGGATCCGTAAACCAGACCAAGTCAAATTGCGTCTT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTATAGGAAGACGCAATTaGACTTGGTCTGGTTTACGG | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSIGRRN*TWSGLR Trigger: CCGTAAACCAGACCAAGTCAAATTGCGTCTTCCTAT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACATGTACACAAAATGTGTATATCCTCACGTAGAAACTCACAGTCCAGTAGCATTTCTCGAACCTaGGCAAACATTGAGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SSHVHKMCISSRRNSQSSSISRT*ANIELS Trigger: ACTCAACTCAATGTTTGCCAAGGTTCGAGAAATGCT...ACTGGACTGTGAGTTTCTACGTGAGGATATACACATTTTGTGTACATGTGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS GCA 72 bp | GCACGTTCTCCACGGAGCCGCTGTCCAGCAGACGGATaGCCCGGCGGAACGGGAGCCCCTCGCCACCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARSPRSRCPADG*PGGTGAPRHRS Trigger: GCTGCGGTGGCGAGGGGCTCCCGTTCCGCCGGGGCATCCGTCTGCTGGACAGCGGCTCCGTGGAGAACGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS GCA 72 bp | AGCGGCCCGGCGAGCCGCCGCGCCTGGGTTAAGAGCTaGAGGAGGAACGTGGCTTCACGAGTTCGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SGPASRRAWVKS*RRNVASRVRLL Trigger: GAGGAGCCGAACTCGTGAAGCCACGTTCCTCCTGCAGCTCTTAACCCAGGCGCGGCGGCTCGCCGGGCCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464588.1 |
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| CDS CCA 72 bp | CGGAGTAAGGGGAGCGGCCCGGCGAGCCGCCGCGCCTaGGTTAAGAGCTGCAGGAGGAACGTGGCTTCACGA | + |
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Preference number: 6 (lower is better) Translates to: RSKGSGPASRRA*VKSCRRNVASR Trigger: TCGTGAAGCCACGTTCCTCCTGCAGCTCTTAACCCAGGCGCGGCGGCTCGCCGGGCCGCTCCCCTTACTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464588.1 |
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| CDS TCA 72 bp | GGGCCACGAACACTGCCGCTTAGCCGGAGAGACCGGTaGCGGCGAGAGCAGCTCCTCTCGCTCACCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: GPRTLPLSRRDR*RREQLLSLTSV Trigger: GACGGAGGTGAGCGAGAGGAGCTGCTCTCGCCGTCACCGGTCTCTCCGGCTAAGCGGCAGTGTTCGTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS CCA 72 bp | GCCGCCGCGCCTGGGTTAAGAGCTGCAGGAGGAACGTaGCTTCACGAGTTCGGCTCCTCGGCCATCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: AAAPGLRAAGGT*LHEFGSSAIHS Trigger: GCTGTGGATGGCCGAGGAGCCGAACTCGTGAAGCCACGTTCCTCCTGCAGCTCTTAACCCAGGCGCGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464588.1 |
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| CDS CCA 72 bp | CCACCCGTTCGTATGCCCACTTTTCCGCCACCGTCTTaGCGGCGCAGTCCAGTAAGGAATCCGGCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PPVRMPTFPPPS*RRSPVRNPAAG Trigger: ACCTGCAGCCGGATTCCTTACTGGACTGCGCCGCCAAGACGGTGGCGGAAAAGTGGGCATACGAACGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS CAA 72 bp | TCCACCCGTTCGTATGCCCACTTTTCCGCCACCGTCTaGGCGGCGCAGTCCAGTAAGGAATCCGGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: STRSYAHFSATV*AAQSSKESGCR Trigger: CCTGCAGCCGGATTCCTTACTGGACTGCGCCGCCAAGACGGTGGCGGAAAAGTGGGCATACGAACGGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359600.6 |
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| CDS CCA 72 bp | TTGCAACTTTATAAGTCACTGCTGGTTCAGAGGCAGTaGCCAGCTCAGTTACTGTGCCACTCAGATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LQLYKSLLVQRQ*PAQLLCHSDES Trigger: GCTTTCATCTGAGTGGCACAGTAACTGAGCTGGCCACTGCCTCTGAACCAGCAGTGACTTATAAAGTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359600.6 ENST00000464588.1 |
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| CDS CCA 72 bp | TCGATCAAAACTGATTGCAACTTTATAAGTCACTGCTaGTTCAGAGGCAGTGGCCAGCTCAGTTACTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SIKTDCNFISHC*FRGSGQLSYCA Trigger: GGCACAGTAACTGAGCTGGCCACTGCCTCTGAACCAGCAGTGACTTATAAAGTTGCAATCAGTTTTGATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359600.6 ENST00000464588.1 |
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