Pregenerated sensors for ZSWIM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163012Ensembl transcript IDs: ENST00000295131.3, ENST00000419862.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAATAAATACTATTTCCTTCTGTAATTTCACGTATTTTAGAGTCTaGAACACTCGTGGGAAGGCGCTTTCGGGGGTGAGGCAGCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LINTISFCNFTYFRV*NTRGKALSGVRQQV Trigger: TACTTGCTGCCTCACCCCCGAAAGCGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGTGAAATTACAGAAGGAAATAGTATTTATTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR-3UTR CCA 90 bp | GACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTAGTCTGGAACACTCGTaGGAAGGCGCTTTCGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: DPADMLTKFPSFRKCGTVSLEHS*EGAFGG Trigger: ACCCCCGAAAGCGCCTTCCCACGAGTGTTCCAGACT...AACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR-3UTR TCA 90 bp | ACATTTTCAAGCCTAAAGATCAAGAGCCATCATCTTTTACAAGAGTTGCAGTTTAGGCGCTTTCGGGGGTaGGGCAGCAAGTATCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TFSSLKIKSHHLLQELQFRRFRG*GSKYPQ Trigger: CTGCGGATACTTGCTGCCTCACCCCCGAAAGCGCCT...AAACTGCAACTCTTGTAAAAGATGATGGCTCTTGATCTTTAGGCTTGAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTTCGGAAATGTGGAACAGTTACAAACGTGAGGATTTCCTAGAAAAACATACGTATTTTAGAGTCTaGAACACTCGTGGGAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: LLSEMWNSYKREDFLEKHTYFRV*NTRGKA Trigger: CGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGT...ATGTTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAATCTTTTACAAGAGTTaGAGTTTGGTCTTAACCTCC | + |
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Preference number: 2 (lower is better) Translates to: QQICLQSSPPFGNVEQLQIFYKS*SLVLTS Trigger: GGAGGTTAAGACCAAACTGCAACTCTTGTAAAAGAT...TTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCCTTTCGGAAATGTGGAACAGTTACAAACGTGAGGATTTCCTAGAAAAACATCTTTTACAAGAGTaGCAGTTTGGTCTTAACCTC | + |
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Preference number: 3 (lower is better) Translates to: PLLSEMWNSYKREDFLEKHLLQE*QFGLNL Trigger: GAGGTTAAGACCAAACTGCAACTCTTGTAAAAGATG...TTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| 3UTR CCA 72 bp | AGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTaGAACAGTTACAAACGTGAGGATTTCCTAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: RYAYKVPLLSEM*NSYKREDFLEK Trigger: TTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR TCA 90 bp | CACTCGTGGGAAGGCGCTTTCGGGGGTGAGGCAGCAAGTATCCGCAGAGATTGTCTCTGCTCGGCTCACTaGGGCGCCAGCCGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: HSWEGAFGGEAASIRRDCLCSAH*GASRSP Trigger: TGGAGACCGGCTGGCGCCTCAGTGAGCCGAGCAGAG...ACAATCTCTGCGGATACTTGCTGCCTCACCCCCGAAAGCGCCTTCCCACGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | GACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTGCGAAGCATGCTGGGTaGGGGCGGAGGCGGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DPADMLTKFPSFRKCGTVAKHAG*GRRRPL Trigger: GAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGC...AACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | ACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACTCGGCGAAGCATGCTaGGTGCGGGCGGAGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TQQICLQSSPPFGNVEQLLGEAC*VRAEAA Trigger: GGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAG...TAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGCGAAGCATGCTGGGTaGGGGCGGAGGCGGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKAKHAG*GRRRPL Trigger: GAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | TCCTTCTGTAATTTCACGTATTTTAGAGTCTGGAACACTCGTGGGAAGGCGCTTAGCCTCGGCGAAGCATaGTGGGTGCGGGCGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SFCNFTYFRVWNTRGKALSLGEA*WVRAEA Trigger: CGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCT...AAGCGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGTGAAATTACAGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTCGGCGAAGCATGCTaGGTGCGGGCGGAGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLGEAC*VRAEAA Trigger: GGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AATTTCACGTATTTTAGAGTCTGGAACACTCGTGGGAAGGCGCTTTCGGGGGTGGGTCTTGGTGCCAGCTaGGCCTCTCGCTCAAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NFTYFRVWNTRGKALSGVGLGAS*ASRSSV Trigger: GACACTTGAGCGAGAGGCTCAGCTGGCACCAAGACC...CACCCCCGAAAGCGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGTGAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR TCA 90 bp | CAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAACCTGGTGGGCGGGGATaGTGGCCAACTGGGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QQICLQSSPPFGNVEQLQPGGRG*WPTGGG Trigger: ACCGCCCCCAGTTGGCCATCATCCCCGCCCACCAGG...TTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAAGCCTCGGCGAAGCATaGTGGGTGCGGGCGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSLGEA*WVRAEA Trigger: CGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | GACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTAGTGGGGGAACCTGGTaGGCGGGGATGATGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: DPADMLTKFPSFRKCGTVSGGTW*AGMMAN Trigger: GTTGGCCATCATCCCCGCCCACCAGGTTCCCCCACT...AACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AATTTCACGTATTTTAGAGTCTGGAACACTCGTGGGAAGGCGCTTTCGGGGGTGCTCGTAGGAGGTAGATaGTGCTACTCAGCGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: NFTYFRVWNTRGKALSGVLVGGR*CYSAPG Trigger: ACCAGGCGCTGAGTAGCAGCATCTACCTCCTACGAG...CACCCCCGAAAGCGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGTGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | CACTCGTGGGAAGGCGCTTTCGGGGGTGAGGCAGCAAGTATCCGCAGAGATTGTCTCCTTTCGGAAATGTaGAACAGTTACAAACGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HSWEGAFGGEAASIRRDCLLSEM*NSYKRE Trigger: CTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAG...ACAATCTCTGCGGATACTTGCTGCCTCACCCCCGAAAGCGCCTTCCCACGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR TCA 90 bp | TATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAACGTGAGAGGCGCTTTCGGGGGTaGGGCAGCAAGTATCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: YAYKVPLLSEMWNSYKRERRFRG*GSKYPQ Trigger: CTGCGGATACTTGCTGCCTCACCCCCGAAAGCGCCT...CTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAAGCGCCTGGTCTTGGTaGCAGCTGAGCCTCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSAWSW*QLSLSL Trigger: GAGCGAGAGGCTCAGCTGGCACCAAGACCAGGCGCT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTCAGCGCCTGGTCTTaGTGCCAGCTGAGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLSAWS*CQLSLS Trigger: CGAGAGGCTCAGCTGGCACCAAGACCAGGCGCTGAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGGTCTTGGTGCCAGCTaGGCCTCTCGCTCAAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKGLGAS*ASRSSV Trigger: GACACTTGAGCGAGAGGCTCAGCTGGCACCAAGACC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | GACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTTACGCACATTGGGTATaGCAGTGGGGGAACCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DPADMLTKFPSFRKCGTVYAHWV*QWGNLV Trigger: CACCAGGTTCCCCCACTGGCATACCCAATGTGCGTA...AACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTGCTACTCAGCGCCTaGTCTTGGTGCCAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLLLSA*SWCQLS Trigger: GCTCAGCTGGCACCAAGACCAGGCGCTGAGTAGCAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | TTTTCAAGCCTAAAGATCAAGAGCCATCATCTTTTACAAGAGTTGCAGTTTGGTGCCAGTGGGGGAACCTaGTGGGCGGGGATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSSLKIKSHHLLQELQFGASGGT*WAGMMA Trigger: GGCCATCATCCCCGCCCACCAGGTTCCCCCACTGGC...ACCAAACTGCAACTCTTGTAAAAGATGATGGCTCTTGATCTTTAGGCTTGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | ACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTAGGTGGCTACGCACATTaGGTATGCCAGTGGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TQQICLQSSPPFGNVEQLGGYAH*VCQWGN Trigger: GTTCCCCCACTGGCATACCCAATGTGCGTAGCCACC...TAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | CCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAGTCTGGAACACTCGTaGGAAGGCGCTTTCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PADMLTKFPSFRKCGTVTSLEHS*EGAFGG Trigger: ACCCCCGAAAGCGCCTTCCCACGAGTGTTCCAGACT...TGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCAGCAGGAAGCCAGTaGGGCCCATCTCTCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSAGSQ*GPSLVG Trigger: TCCTACGAGAGATGGGCCCCACTGGCTTCCTGCTGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACCTGGTTGGGGAGTTTaGACTCGATGTATCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKPGWGV*TRCIPR Trigger: TCGGGGGATACATCGAGTTCAAACTCCCCAACCAGG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTCGTAGGAGGTAGATaGTGCTACTCAGCGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLVGGR*CYSAPG Trigger: ACCAGGCGCTGAGTAGCAGCATCTACCTCCTACGAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | TTTTCAAGCCTAAAGATCAAGAGCCATCATCTTTTACAAGAGTTGCAGTTTGGTCTCAGCGCCTGGTCTTaGTGCCAGCTGAGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: FSSLKIKSHHLLQELQFGLSAWS*CQLSLS Trigger: CGAGAGGCTCAGCTGGCACCAAGACCAGGCGCTGAG...ACCAAACTGCAACTCTTGTAAAAGATGATGGCTCTTGATCTTTAGGCTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | AGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAATCAGCAGGAAGCCAGTaGGGCCCATCTCTCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SRYAYKVPLLSEMWNSYKSAGSQ*GPSLVG Trigger: TCCTACGAGAGATGGGCCCCACTGGCTTCCTGCTGA...TTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR CCA 90 bp | TTTTCAAGCCTAAAGATCAAGAGCCATCATCTTTTACAAGAGTTGCAGTTTGGTCATTGGGTATGCCAGTaGGGGAACCTGGTGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSSLKIKSHHLLQELQFGHWVCQ*GNLVGG Trigger: CCCGCCCACCAGGTTCCCCCACTGGCATACCCAATG...ACCAAACTGCAACTCTTGTAAAAGATGATGGCTCTTGATCTTTAGGCTTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGTAGGAGGTAGATGCTaGTACTCAGCGCCTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKVGGRC*YSAPGL Trigger: AAGACCAGGCGCTGAGTAGCAGCATCTACCTCCTAC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | TATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAACGTGAGGTAGGAGGTAGATGCTaGTACTCAGCGCCTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YAYKVPLLSEMWNSYKREVGGRC*YSAPGL Trigger: AAGACCAGGCGCTGAGTAGCAGCATCTACCTCCTAC...CTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACCGGGGAGTAATCCCTaGATGTTATGTGCTACCGTG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKPGSNP*MLCATV Trigger: CACGGTAGCACATAACATGCAGGGATTACTCCCCGG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | ACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTAACGTATTTTAGAGTCTaGAACACTCGTGGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TQQICLQSSPPFGNVEQLTYFRV*NTRGKA Trigger: CGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGT...TAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACAGTTGGAGAGGCAGTaGTCTTACAATGTGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKQLERQ*SYNVFW Trigger: CCAAAACACATTGTAAGATCACTGCCTCTCCAACTG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAAAGACCCAGCAGATATaGTTACAAAGTTCCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKKTQQI*LQSSPP Trigger: AGGAGGGGAACTTTGTAAGCATATCTGCTGGGTCTT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTCGTCATTTGTTCCTaGTTGGGGAGTTTGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKFVICS*LGSLNS Trigger: CGAGTTCAAACTCCCCAACCAGGAACAAATGACGAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACGAAATGTAAACGTGTaGGAAAGATGGCAGCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKRNVNV*ERWQQL Trigger: TAGCTGCTGCCATCTTTCCCACACGTTTACATTTCG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTTTCCACTGATGCATaGACTTTCCATTGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKFSTDA*TFHCSG Trigger: CCCACTGCAATGGAAAGTCCATGCATCAGTGGAAAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTGTTTGAAACAGACTaGTGTGCTTGTCCATTCACT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLFETD*CACPFT Trigger: AGTGAATGGACAAGCACATCAGTCTGTTTCAAACAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGGAGGAAGCAGTGTTTaGGATGGTATTTTCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKGGSSV*DGIFPN Trigger: ATTTGGGAAAATACCATCTCAAACACTGCTTCCTCC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACGGCTTAGACTAGTGTaGAATTTTCCACTGATGCAT | + |
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Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKRLRLV*NFPLMH Trigger: ATGCATCAGTGGAAAATTTCACACTAGTCTAAGCCG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGCATGGACTTTCCATTaGAGTGGGACACACAATATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKAWTFH*SGTHNI Trigger: AATATTGTGTGTCCCACTGCAATGGAAAGTCCATGC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACTCCTTTCGGAAATGTaGAACAGTTACAAACGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLLSEM*NSYKRE Trigger: CTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGCATCTTTTGGGCTTTaGGGTGTATTCAATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKASFGL*GVFNSS Trigger: TGATGAATTGAATACACCTCAAAGCCCAAAAGATGC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAACAGTGGGTAAATCTTaGAGATACCTGGGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKTVGKS*RYLGKC Trigger: ACATTTTCCCAGGTATCTTCAAGATTTACCCACTGT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATGTGAAATTTTCCACTaGTGCATGGACTTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKCEIFH*CMDFPL Trigger: CAATGGAAAGTCCATGCATCAGTGGAAAATTTCACA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTTGTATTTACAGAGTaGGACACAGGCTGTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKFVFTE*DTGCLD Trigger: ATCAAGACAGCCTGTGTCTCACTCTGTAAATACAAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTAATTTCACGTATTTTAGAGTCTGGAACACTCGTGGGAAGGCGCTTTCGATCTTTTACAAGAGTTaGAGTTTGGTCTTAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCNFTYFRVWNTRGKALSIFYKS*SLVLTS Trigger: GGAGGTTAAGACCAAACTGCAACTCTTGTAAAAGAT...CGAAAGCGCCTTCCCACGAGTGTTCCAGACTCTAAAATACGTGAAATTACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCTAAAAGTAGCTCTTaGCAAATAGAGCAGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSKSSS*QIEQIS Trigger: GGATATCTGCTCTATTTGTCAAGAGCTACTTTTAGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACACACAATATTCTTATaGACAATAGGAGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKHTIFL*TIGGSS Trigger: ACTGCTTCCTCCTATTGTTCATAAGAATATTGTGTG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGGCTGTCTTGATAGATaGCTACATTTTCGTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKGCLDR*LHFRVI Trigger: AATTACACGAAAATGTAGTCATCTATCAAGACAGCC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCCCTGCATGTTATGTaGTACCGTGAAAAATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSLHVM*YREKYL Trigger: CAAATATTTTTCACGGTAGCACATAACATGCAGGGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGAGGACATTTCAACATaGAAGTGTTTGATGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKEDIST*KCLMYS Trigger: AGAGTACATCAAACACTTCCATGTTGAAATGTCCTC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAACACTTCCCCTCAATTaGAAACTGTTTGCAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKTLPLN*KLFAVI Trigger: AATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCTTACAATGTGTTTTaGTGTGTAAACTTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSYNVF*CVNLAL Trigger: CAAGGCCAAGTTTACACACCAAAACACATTGTAAGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTCTTAGTAATCAGTTaGAGAGGCAGTGATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKFLVIS*RGSDLT Trigger: TGTAAGATCACTGCCTCTCCAACTGATTACTAAGAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGACTTTCCATTGCAGTaGGACACACAATATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKDFPLQ*DTQYSY Trigger: ATAAGAATATTGTGTGTCCCACTGCAATGGAAAGTC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTATATGAATACTATTaGCACAGCCAAACCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLYEYY*HSQTCK Trigger: TTTGCAGGTTTGGCTGTGGCAATAGTATTCATATAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGTCTTCTTTAGGTTGTaGTTATTACATTTACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTEVPGSNPCMLCATVKVFFRL*LLHLQP Trigger: AGGCTGTAAATGTAATAACCACAACCTAAAGAAGAC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS CCA 90 bp | AGTGTCTTCGCCTTTCAGAGGCCTTATAGCCTCGGCGAAGCATGCTaGGTGCGGGCGGAGGCGGCCCCTCTGCTCGGCTCACTGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFAFQRPYSLGEAC*VRAEAAPLLGSLRR Trigger: GCGCCTCAGTGAGCCGAGCAGAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCTATAAGGCCTCTGAAAGGCGAAGACACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS GCA 90 bp | TCAAGTGTCTTCGCCTTTCAGAGGCCTTATAGCCTCGGCGAAGCATaGTGGGTGCGGGCGGAGGCGGCCCCTCTGCTCGGCTCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSVFAFQRPYSLGEA*WVRAEAAPLLGSLR Trigger: CCTCAGTGAGCCGAGCAGAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCTATAAGGCCTCTGAAAGGCGAAGACACTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS GCA 90 bp | GCAAGTATCCGCAGAGATTGTGATGGTGGCTACGCACATTGGGTATaGCAGTGGGGGAACCTGGTGGGCGGGGATGATGGCCAACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASIRRDCDGGYAHWV*QWGNLVGGDDGQLG Trigger: CCCCAGTTGGCCATCATCCCCGCCCACCAGGTTCCCCCACTGGCATACCCAATGTGCGTAGCCACCATCACAATCTCTGCGGATACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS CCA 90 bp | GGAAATCCATGTATTCCGGCTCCTCCTCCCTCAGCAGGAAGCCAGTaGGGCCCATCTCTCGTAGGAGGTAGATGCTGCTACTCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GNPCIPAPPPSAGSQ*GPSLVGGRCCYSAP Trigger: AGGCGCTGAGTAGCAGCATCTACCTCCTACGAGAGATGGGCCCCACTGGCTTCCTGCTGAGGGAGGAGGAGCCGGAATACATGGATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295131.3 ENST00000419862.1 |
||
| CDS CCA 90 bp | GAGGCAGCAAGTATCCGCAGAGATTGTGATGGTGGCTACGCACATTaGGTATGCCAGTGGGGGAACCTGGTGGGCGGGGATGATGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EAASIRRDCDGGYAH*VCQWGNLVGGDDGQ Trigger: TTGGCCATCATCCCCGCCCACCAGGTTCCCCCACTGGCATACCCAATGTGCGTAGCCACCATCACAATCTCTGCGGATACTTGCTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS TCA 90 bp | GTAGGAGGTAGATGCTGCTACTCAGCGCCTGGTCTTGGTGCCAGCTaGGCCTCTCGCTCAAGTGTCTTCGCCTTTCAGAGGCCTTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGGRCCYSAPGLGAS*ASRSSVFAFQRPYS Trigger: GCTATAAGGCCTCTGAAAGGCGAAGACACTTGAGCGAGAGGCTCAGCTGGCACCAAGACCAGGCGCTGAGTAGCAGCATCTACCTCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295131.3 ENST00000419862.1 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACATGGTGGCTACGCACATaGGGTATGCCAGTGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PADMLTKFPSFRKCGTVTWWLRT*GMPVGE Trigger: TTCCCCCACTGGCATACCCAATGTGCGTAGCCACCA...TGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCCTGGTTGGGGAGTTaGAACTCGATGTATCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSWLGS*NSMYPP Trigger: CGGGGGATACATCGAGTTCAAACTCCCCAACCAGGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGTCATTTGTTCCTGGTaGGGGAGTTTGAACTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKVICSW*GSLNSM Trigger: CATCGAGTTCAAACTCCCCAACCAGGAACAAATGAC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS TCA 90 bp | TGGTTATTACATTTACAGCCTTTGGTCATCCGGCTTAGACTAGTGTaGAATTTTCCACTGATGCATGGACTTTCCATTGCAGTGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: WLLHLQPLVIRLRLV*NFPLMHGLSIAVGH Trigger: GTGTCCCACTGCAATGGAAAGTCCATGCATCAGTGGAAAATTTCACACTAGTCTAAGCCGGATGACCAAAGGCTGTAAATGTAATAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGGAATCCCAAGGTGTTaGTCCAGTCTCTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKGIPRC*SSLSFS Trigger: AGAAAAAGAGAGACTGGACAAACACCTTGGGATTCC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGGGCATGAATTGCACTaGTGGAATAACCAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKGHELH*WNNQLS Trigger: TGACAACTGGTTATTCCACAAGTGCAATTCATGCCC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATGCATGGACTTTCCATaGCAGTGGGACACACAATAT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKCMDFP*QWDTQY Trigger: ATATTGTGTGTCCCACTGCAATGGAAAGTCCATGCA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAACCTCTGGAAGTAAAGTaGATCTCTTGTTGTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKPLEVK*ISCCPL Trigger: GAGAGGACAACAAGAGATCAACTTTACTTCCAGAGG...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS GCA 90 bp | TGCATTCGGTACACTTATAACACTTCCCCTCAATTGGAAACTGTTTaGAGTTATTACAGGGAATCCCAAGGTGTTTGTCCAGTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CIRYTYNTSPQLETV*SYYRESQGVCPVSL Trigger: AAGAGAGACTGGACAAACACCTTGGGATTCCCTGTAATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGTTATAAGTGTACCGAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS CCA 90 bp | AGACCCAGCAGATATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTaGAACAGTTACAAACGTGAGGATTTCCTAGAAAAACTCGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPSRYAYKVPLLSEM*NSYKREDFLEKLGN Trigger: ATTTCCGAGTTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGTTCATTTTCGTCATTaGTTCCTGGTTGGGGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKVHFRH*FLVGEF Trigger: AAACTCCCCAACCAGGAACAAATGACGAAAATGAAC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAGCTGCAGCTACTAGTTaGCTAGAGTTTTTGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKAAATS*LEFLNS Trigger: GGAATTCAAAAACTCTAGCAAACTAGTAGCTGCAGC...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCAATAGGGCATGAATaGCACTTGTGGAATAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSIGHE*HLWNNQ Trigger: CTGGTTATTCCACAAGTGCAATTCATGCCCTATTGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTACATTTACAGCCTTaGGTCATCCGGCTTAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLHLQP*VIRLRL Trigger: TAGTCTAAGCCGGATGACCAAAGGCTGTAAATGTAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS TCA 90 bp | TGGAGCAAGCAGCTTACTATTCTTAGTAATCAGTTGGAGAGGCAGTaGTCTTACAATGTGTTTTGGTGTGTAAACTTGGCCTTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSKQLTILSNQLERQ*SYNVFWCVNLALLF Trigger: GAAAAGCAAGGCCAAGTTTACACACCAAAACACATTGTAAGATCACTGCCTCTCCAACTGATTACTAAGAATAGTAAGCTGCTTGCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS CCA 90 bp | TTGTTGTCCTCTCTTATTTTAGTGGCAGGAGTCTTCTTTAGGTTGTaGTTATTACATTTACAGCCTTTGGTCATCCGGCTTAGACTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSLILVAGVFFRL*LLHLQPLVIRLRLV Trigger: CACTAGTCTAAGCCGGATGACCAAAGGCTGTAAATGTAATAACCACAACCTAAAGAAGACTCCTGCCACTAAAATAAGAGAGGACAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAAACACTTCCCCTCAATaGGAAACTGTTTGCAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKNTSPQ*ETVCSY Trigger: ATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGTT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTTCATAGGCATCTTTaGGGCTTTGAGGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKFHRHL*GFEVYS Trigger: TGAATACACCTCAAAGCCCAAAAGATGCCTATGAAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTTACAAAGTTCCCCTCCTTTCGGAAATGTGGAACAGTTACAAACGTGAGCATCTTTTACAAGAGTaGCAGTTTGGTCTTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: YAYKVPLLSEMWNSYKREHLLQE*QFGLNL Trigger: GAGGTTAAGACCAAACTGCAACTCTTGTAAAAGATG...CTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGAACTTTGTAAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATCAATTGGAAACTGTTaGCAGTTATTACAGGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKSIGNC*QLLQGI Trigger: GATTCCCTGTAATAACTGCAAACAGTTTCCAATTGA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAAATCTTACAATGTGTTTaGGTGTGTAAACTTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKILQCV*VCKLGL Trigger: AAGGCCAAGTTTACACACCAAAACACATTGTAAGAT...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295131.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATACATGGTAGCAATCTaGTATGTTGACCAAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKYMVAI*YVDQDE Trigger: TTCATCTTGGTCAACATACAAGATTGCTACCATGTA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS-3UTR CAA 90 bp | AAAAATACAGAAGTACCGGGGAGTAATCCCTGCATGTTATGTGCTACCGTGAAATTAGCTGTGCTCCAATaGACAATAAGATTGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: KNTEVPGSNPCMLCATVKLAVLQ*TIRLKS Trigger: GGATTTCAATCTTATTGTCAATTGGAGCACAGCTAA...TTTCACGGTAGCACATAACATGCAGGGATTACTCCCCGGTACTTCTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS TCA 72 bp | GGGTGCGGGCGGAGGCGGCCCCTCTGCTCGGCTCACTaGGGCGCCAGCCGGTCTCCAAGACGACGGCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GCGRRRPLCSAH*GASRSPRRRRA Trigger: TGCACGCCGTCGTCTTGGAGACCGGCTGGCGCCTCAGTGAGCCGAGCAGAGGGGCCGCCTCCGCCCGCACCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS GCA 72 bp | TTCGCCTTTCAGAGGCCTTATAGCCTCGGCGAAGCATaGTGGGTGCGGGCGGAGGCGGCCCCTCTGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: FAFQRPYSLGEA*WVRAEAAPLLG Trigger: GCCGAGCAGAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCTATAAGGCCTCTGAAAGGCGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295131.3 ENST00000419862.1 |
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| CDS CCA 72 bp | GCCTTTCAGAGGCCTTATAGCCTCGGCGAAGCATGCTaGGTGCGGGCGGAGGCGGCCCCTCTGCTCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: AFQRPYSLGEAC*VRAEAAPLLGS Trigger: TGAGCCGAGCAGAGGGGCCGCCTCCGCCCGCACCCAGCATGCTTCGCCGAGGCTATAAGGCCTCTGAAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295131.3 ENST00000419862.1 |
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| CDS GCA 72 bp | CGCAGAGATTGTGATGGTGGCTACGCACATTGGGTATaGCAGTGGGGGAACCTGGTGGGCGGGGATGATGGC | + |
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Preference number: 6 (lower is better) Translates to: RRDCDGGYAHWV*QWGNLVGGDDG Trigger: GCCATCATCCCCGCCCACCAGGTTCCCCCACTGGCATACCCAATGTGCGTAGCCACCATCACAATCTCTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS CCA 72 bp | TGTATTCCGGCTCCTCCTCCCTCAGCAGGAAGCCAGTaGGGCCCATCTCTCGTAGGAGGTAGATGCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: CIPAPPPSAGSQ*GPSLVGGRCCY Trigger: GTAGCAGCATCTACCTCCTACGAGAGATGGGCCCCACTGGCTTCCTGCTGAGGGAGGAGGAGCCGGAATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295131.3 ENST00000419862.1 |
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| CDS CCA 72 bp | GATTGTGATGGTGGCTACGCACATTGGGTATGCCAGTaGGGGAACCTGGTGGGCGGGGATGATGGCCAACTG | + |
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Preference number: 6 (lower is better) Translates to: DCDGGYAHWVCQ*GNLVGGDDGQL Trigger: CAGTTGGCCATCATCCCCGCCCACCAGGTTCCCCCACTGGCATACCCAATGTGCGTAGCCACCATCACAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS CCA 72 bp | AGTATCCGCAGAGATTGTGATGGTGGCTACGCACATTaGGTATGCCAGTGGGGGAACCTGGTGGGCGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SIRRDCDGGYAH*VCQWGNLVGGD Trigger: ATCCCCGCCCACCAGGTTCCCCCACTGGCATACCCAATGTGCGTAGCCACCATCACAATCTCTGCGGATACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419862.1 |
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| CDS TCA 72 bp | CATTTACAGCCTTTGGTCATCCGGCTTAGACTAGTGTaGAATTTTCCACTGATGCATGGACTTTCCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: HLQPLVIRLRLV*NFPLMHGLSIA Trigger: TGCAATGGAAAGTCCATGCATCAGTGGAAAATTTCACACTAGTCTAAGCCGGATGACCAAAGGCTGTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CCA 72 bp | CCTGGAGCAAGCAGCTTACTATTCTTAGTAATCAGTTaGAGAGGCAGTGATCTTACAATGTGTTTTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PGASSLLFLVIS*RGSDLTMCFGV Trigger: CACACCAAAACACATTGTAAGATCACTGCCTCTCCAACTGATTACTAAGAATAGTAAGCTGCTTGCTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 72 bp | AACTGTTTGCAGTTATTACAGGGAATCCCAAGGTGTTaGTCCAGTCTCTCTTTTTCTGCTGCAGCTACTAGT | + |
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Preference number: 6 (lower is better) Translates to: NCLQLLQGIPRC*SSLSFSAAATS Trigger: ACTAGTAGCTGCAGCAGAAAAAGAGAGACTGGACAAACACCTTGGGATTCCCTGTAATAACTGCAAACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 90 bp | TCAATTGGAAACTGTTTGCAGTTATTACAGGGAATCCCAAGGTGTTaGTCCAGTCTCTCTTTTTCTGCTGCAGCTACTAGTTTGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SIGNCLQLLQGIPRC*SSLSFSAAATSLLE Trigger: CTCTAGCAAACTAGTAGCTGCAGCAGAAAAAGAGAGACTGGACAAACACCTTGGGATTCCCTGTAATAACTGCAAACAGTTTCCAATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS TCA 72 bp | TCCCCTCCTTTCGGAAATGTGGAACAGTTACAAACGTaGGGATTTCCTAGAAAAACTCGGAAATCCATGTAT | + |
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Preference number: 6 (lower is better) Translates to: SPPFGNVEQLQT*GFPRKTRKSMY Trigger: ATACATGGATTTCCGAGTTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCGAAAGGAGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 72 bp | TGTACCCATCTTCTTCAACATGTTCATTTTCGTCATTaGTTCCTGGTTGGGGAGTTTGAACTCGATGTATCC | + |
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Preference number: 6 (lower is better) Translates to: CTHLLQHVHFRH*FLVGEFELDVS Trigger: GGATACATCGAGTTCAAACTCCCCAACCAGGAACAAATGACGAAAATGAACATGTTGAAGAAGATGGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 90 bp | CTCTTGTTGTCCTCTCTTATTTTAGTGGCAGGAGTCTTCTTTAGGTaGTGGTTATTACATTTACAGCCTTTGGTCATCCGGCTTAGACTA | + |
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Preference number: 6 (lower is better) Translates to: LLLSSLILVAGVFFR*WLLHLQPLVIRLRL Trigger: TAGTCTAAGCCGGATGACCAAAGGCTGTAAATGTAATAACCACAACCTAAAGAAGACTCCTGCCACTAAAATAAGAGAGGACAACAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CCA 72 bp | TATGCATTCGGTACACTTATAACACTTCCCCTCAATTaGAAACTGTTTGCAGTTATTACAGGGAATCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: YAFGTLITLPLN*KLFAVITGNPK Trigger: CTTGGGATTCCCTGTAATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGTTATAAGTGTACCGAATGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CCA 72 bp | TCTCTTATTTTAGTGGCAGGAGTCTTCTTTAGGTTGTaGTTATTACATTTACAGCCTTTGGTCATCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SLILVAGVFFRL*LLHLQPLVIRL Trigger: AAGCCGGATGACCAAAGGCTGTAAATGTAATAACCACAACCTAAAGAAGACTCCTGCCACTAAAATAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 72 bp | CTATGCATTCGGTACACTTATAACACTTCCCCTCAATaGGAAACTGTTTGCAGTTATTACAGGGAATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LCIRYTYNTSPQ*ETVCSYYRESQ Trigger: TTGGGATTCCCTGTAATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGTTATAAGTGTACCGAATGCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS GCA 72 bp | AGTGTGAAATTTTCCACTGATGCATGGACTTTCCATTaGAGTGGGACACACAATATTCTTATGAACAATAGG | + |
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Preference number: 6 (lower is better) Translates to: SVKFSTDAWTFH*SGTHNILMNNR Trigger: CCTATTGTTCATAAGAATATTGTGTGTCCCACTGCAATGGAAAGTCCATGCATCAGTGGAAAATTTCACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 90 bp | TTGACAATAAGATTGAAATCCTCTGGAAGTAAAGTTGATCTCTTGTaGTCCTCTCTTATTTTAGTGGCAGGAGTCTTCTTTAGGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LTIRLKSSGSKVDLL*SSLILVAGVFFRLW Trigger: CCACAACCTAAAGAAGACTCCTGCCACTAAAATAAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCTTATTGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 72 bp | AGATTGAAATCCTCTGGAAGTAAAGTTGATCTCTTGTaGTCCTCTCTTATTTTAGTGGCAGGAGTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RLKSSGSKVDLL*SSLILVAGVFF Trigger: AAAGAAGACTCCTGCCACTAAAATAAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 72 bp | ATAAGATTGAAATCCTCTGGAAGTAAAGTTGATCTCTaGTTGTCCTCTCTTATTTTAGTGGCAGGAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IRLKSSGSKVDL*LSSLILVAGVF Trigger: GAAGACTCCTGCCACTAAAATAAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 90 bp | CAATTGACAATAAGATTGAAATCCTCTGGAAGTAAAGTTGATCTCTaGTTGTCCTCTCTTATTTTAGTGGCAGGAGTCTTCTTTAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QLTIRLKSSGSKVDL*LSSLILVAGVFFRL Trigger: CAACCTAAAGAAGACTCCTGCCACTAAAATAAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCTTATTGTCAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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| CDS CAA 90 bp | CTTTTAGACAAACTAAGTTTAGCTGTGCTCCAATTGACAATAAGATaGAAATCCTCTGGAAGTAAAGTTGATCTCTTGTTGTCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLDKLSLAVLQLTIR*KSSGSKVDLLLSSL Trigger: AAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCTTATTGTCAATTGGAGCACAGCTAAACTTAGTTTGTCTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295131.3 |
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