RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN9 (Homo sapiens)

Ensembl gene IDs: ENSG00000137185

Ensembl transcript IDs: ENST00000252207.10, ENST00000425468.6, ENST00000526391.5, ENST00000527436.5, ENST00000527844.1, ENST00000531941.1, ENST00000531979.5, ENST00000531981.5, ENST00000647743.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTCATGTACCATaGATCAGAAGTCCAGAAAGCTTCCAGGGTGGTACTCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: KLCSTAIPESLPHVP*IRSPESFQGGTQGE
Trigger: TTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACTTCTGATGCATGGTACATGAGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR CCA 90 bp CCTTCCTCATGTACCATGCATCAGAAGTCCAGAAAGCTTCCAGGGTaGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGGGTCAAAGAT +
Preference number: 1 (lower is better)
Translates to: PSSCTMHQKSRKLPG*YSGRSLHAGRRVKD
Trigger: ATCTTTGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACTTCTGATGCATGGTACATGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 90 bp ATGCCAGGATCTGAACCTGTCTGTCAAACCTTGAAGTCCATTCTCTaGAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTCATGTAC +
Preference number: 1 (lower is better)
Translates to: MPGSEPVCQTLKSIL*SCAPQRSLKAFLMY
Trigger: GTACATGAGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAGGTTTGACAGACAGGTTCAGATCCTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR GCA 90 bp CCAACTTCTCCATGTGAGGGATCCTGCTGTGATACCTCCCAGGTCTaGTCATTAAACATTTTCCCATGTGGTTCCACTATCTTAGGACAG +
Preference number: 1 (lower is better)
Translates to: PTSPCEGSCCDTSQV*SLNIFPCGSTILGQ
Trigger: CTGTCCTAAGATAGTGGAACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCCCTCACATGGAGAAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 90 bp ATGGCCATCTATAAGCCAGGAAGAGGCCTCACCAGAAACCAAACCTaGTGGTATCTTGATCTTGGACTACTAGCCTTTGAAAATGTGAGA +
Preference number: 1 (lower is better)
Translates to: MAIYKPGRGLTRNQT*WYLDLGLLAFENVR
Trigger: TCTCACATTTTCAAAGGCTAGTAGTCCAAGATCAAGATACCATCAGGTTTGGTTTCTGGTGAGGCCTCTTCCTGGCTTATAGATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR GCA 90 bp TCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTaGTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGT +
Preference number: 1 (lower is better)
Translates to: SILSLCSPTSPCEGS*CDTSQVCSLNIFPC
Trigger: ACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR CCA 90 bp AGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGTaGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATG +
Preference number: 1 (lower is better)
Translates to: SYYQPHFVDEGSEVK*LSNLPNTSSFHEAM
Trigger: CATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR TCA 90 bp ATTATATTTGGAGATAGGGCCTTGAGGAAGGTATTAAAAGTTAAATaGGGTTATAAGGAAGGGCCCTATCGGGTAGGAATGGTATCTGTC +
Preference number: 1 (lower is better)
Translates to: IIFGDRALRKVLKVK*GYKEGPYRVGMVSV
Trigger: GACAGATACCATTCCTACCCGATAGGGCCCTTCCTTATAACCTCATTTAACTTTTAATACCTTCCTCAAGGCCCTATCTCCAAATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CCA 90 bp GGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGGGTCAAAGATGAGCACCTGGTAAGGAGTCTTTaGGTCTCCTGTTTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GWYSGRSLHAGRRVKDEHLVRSL*VSCFPS
Trigger: GCTGGGAAAACAGGAGACCCAAAGACTCCTTACCAG...GTGCTCATCTTTGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR GCA 90 bp AGTCCAGAAAGCTTCCAGGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAATTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SPESFQGGTQGEVCTQGEFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...TTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR TCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCCAAGGGTGGCACTGGTaGTTTGTGACAATAGTGACC +
Preference number: 2 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGQGWHW*FVTIVT
Trigger: GGTCACTATTGTCACAAATCACCAGTGCCACCCTTG...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 2 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp AAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCAAAGTCTCTGTCCTTATAAGATaGGAGAGCTTGCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: KGGHCHHSEDYREGNGKVSVLIR*ESLLSL
Trigger: GAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGA...GACTTTGCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR TCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCTCCTTAGGCTGGGACTaGAGGGTCAGTGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVSLGWD*RVSGVC
Trigger: GCAGACACCACTGACCCTTCAGTCCCAGCCTAAGGA...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
3UTR-3UTR GCA 90 bp GAGAAGGAAATGGCAAAGTCTGATTTCACTGGATTCTCCCATACAGTTCTGCCACATTCTCTGAAGCTGTaGTCCACAGCGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: EKEMAKSDFTGFSHTVLPHSLKL*STAIPE
Trigger: TTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATG...TGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTGCCATTTCCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR GCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCTGCTCTCTCTCTGTATaGATACAGAAGAAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGCSLSV*IQKKGH
Trigger: ATGGCCTTTCTTCTGTATGCATACAGAGAGAGAGCA...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTCTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFLPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCCCTAACCCCTCAATATaGTTATATTTGGAGATAGGG +
Preference number: 2 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGPNPSI*LYLEIG
Trigger: CCCTATCTCCAAATATAATCATATTGAGGGGTTAGG...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR TCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGTCCTTAGGCTGGGACTaGAGGGTCAGTGGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAASLGWD*RVSGVC
Trigger: GCAGACACCACTGACCCTTCAGTCCCAGCCTAAGGA...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR TCA 90 bp GGATCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTTTGTTTGTTTTTGCTTaGCCAGGTGGGATTCGTTCA +
Preference number: 2 (lower is better)
Translates to: GSCCDTSQVCSLNIFPCGLFVFA*PGGIRS
Trigger: TGAACGAATCCCACCTGGTCAAGCAAAAACAAACAA...ACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAATTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR GCA 90 bp AAAGCAGCTGACTCAGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACTCTCCCATACAGTTCTaGCACTTACTAAGCATATCT +
Preference number: 2 (lower is better)
Translates to: KAADSVPSAQYYIHKGGHSPIQF*HLLSIS
Trigger: AGATATGCTTAGTAAGTGGCAGAACTGTATGGGAGA...GTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACTGAGTCAGCTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR TCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTACACAACTTGGGTGGTaGTCTGGAAAACTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFTQLGW*SGKLAH
Trigger: ATGAGCAAGTTTTCCAGATCACCACCCAAGTTGTGT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp CTATCGGGTAGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTCTGTCAAACCTTaGAGTCCATTCTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: LSGRNGICPYKMRELALSLSVKP*SPFSEA
Trigger: AGCTTCAGAGAATGGACTTCAAGGTTTGACAGACAG...AGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR TCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGC +
Preference number: 2 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHIEWHF*AESHVS
Trigger: GCTCACATGTGACTCTGCTCAGAAGTGCCATTCTAT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
3UTR-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGGGCGATGCCAGGATCTaGACCTGTCTGTCAAACCTT +
Preference number: 2 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAAGDARI*TCLSNL
Trigger: AAGGTTTGACAGACAGGTTCAGATCCTGGCATCGCC...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGC +
Preference number: 2 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKIEWHF*AESHVS
Trigger: GCTCACATGTGACTCTGCTCAGAAGTGCCATTCTAT...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR TCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGGGCTCTCAGAAGAACTaGCCATTACTGCTATCTGGT +
Preference number: 2 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKGSQKN*PLLLSG
Trigger: ACCAGATAGCAGTAATGGTCAGTTCTTCTGAGAGCC...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR CCA 90 bp GAGAAGGAAATGGCAAAGTCTGATTTCACTGGATTCTCCCATACAGTTCTGCCAGGATCTGAGGTCAAGTaGTTAAGTAATCTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: EKEMAKSDFTGFSHTVLPGSEVK*LSNLPN
Trigger: ATTGGGCAGATTACTTAACCACTTGACCTCAGATCC...TGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTGCCATTTCCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR CAA 90 bp ATCTTAGGACAGTCTTTCCTTAGCACCAACTCTCTGTCCTCAGTCTaGGTTACTTCATCAGAAACCAAACCTGATGGTATCTTGATCTTG +
Preference number: 2 (lower is better)
Translates to: ILGQSFLSTNSLSSV*VTSSETKPDGILIL
Trigger: CAAGATCAAGATACCATCAGGTTTGGTTTCTGATGAAGTAACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAAGACTGTCCTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR CCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGAAGACAACCAGTCTGTaGTATTCTCTTAAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKKTTSL*YSLKAA
Trigger: CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTT...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTACACAACTTGGGTGGTaGTCTGGAAAACTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFTQLGW*SGKLAH
Trigger: ATGAGCAAGTTTTCCAGATCACCACCCAAGTTGTGT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR TCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCACACAACTTGGGTGGTaGTCTGGAAAACTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVTQLGW*SGKLAH
Trigger: ATGAGCAAGTTTTCCAGATCACCACCCAAGTTGTGT...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCTGTCTGTCAAACCTTaGAGTCCATTCTCTGAAGCT +
Preference number: 2 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLSVKP*SPFSEA
Trigger: AGCTTCAGAGAATGGACTTCAAGGTTTGACAGACAG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR-3UTR GCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGTCAACATCAAATAAATaGTGTCCCTCACCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKSTSNK*CPSPVS
Trigger: AGAGACAGGTGAGGGACAGCATTTATTTGATGTTGA...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR CCA 72 bp TGTACCATGCATCAGAAGTCCAGAAAGCTTCCAGGGTaGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGG +
Preference number: 3 (lower is better)
Translates to: CTMHQKSRKLPG*YSGRSLHAGRR
Trigger: CCTTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACTTCTGATGCATGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 72 bp TGTCCCTCACCTGTCTCTCCAATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGCTGTGGCTCCTTAGGC +
Preference number: 3 (lower is better)
Translates to: CPSPVSPIEWHF*AESHVSCGSLG
Trigger: GCCTAAGGAGCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCATTCTATTGGAGAGACAGGTGAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
3UTR-3UTR CAA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCCTGCCCCACACAACTaGGGTGGTGATCTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLPAPHN*GGDLEN
Trigger: GTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAGG...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 72 bp TCTGAACCTGTCTGTCAAACCTTGAAGTCCATTCTCTaGAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: SEPVCQTLKSIL*SCAPQRSLKAF
Trigger: GAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAGGTTTGACAGACAGGTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR CCA 72 bp CTCAGTCCCAAGTGCTCAGTACTATATCCACAAGGGTaGTCACTGCCACCACTCAGAAGATTACAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: LSPKCSVLYPQG*SLPPLRRLQRR
Trigger: CCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACCTGCCCCACACAACTaGGGTGGTGATCTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSPAPHN*GGDLEN
Trigger: GTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAGG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR-3UTR CAA 90 bp AGTCCAGAAAGCTTCCAGGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGTTTATTGTTTGTTTTaGCTTGACCAGGTGGGATTC +
Preference number: 3 (lower is better)
Translates to: SPESFQGGTQGEVCTQGEVYCLF*LDQVGF
Trigger: GAATCCCACCTGGTCAAGCAAAAACAAACAATAAAC...TTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR GCA 72 bp CCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACTaGCACCACTCAGAAGATTACAGAGAAGGAAATGGC +
Preference number: 3 (lower is better)
Translates to: PSAQYYIHKGGH*HHSEDYREGNG
Trigger: GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGAGCACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACCTGCCCCACACAACTaGGGTGGTGATCTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEPAPHN*GGDLEN
Trigger: GTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAGG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
3UTR TCA 72 bp GGGTCAAAGATGAGCACACTAGGCTCTCAGAAGAACTaGCCATTACTGCTATCTGGTAAGGAGTCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: GSKMSTLGSQKN*PLLLSGKESLG
Trigger: ACCCAAAGACTCCTTACCAGATAGCAGTAATGGTCAGTTCTTCTGAGAGCCTAGTGTGCTCATCTTTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR GCA 72 bp CATTTGTGTTGCCCCTCTCCTAAGAGGTTTCCCCACTaGCTCTCTATCCTATCCTTATGTTCACCAACTTCT +
Preference number: 3 (lower is better)
Translates to: HLCCPSPKRFPH*LSILSLCSPTS
Trigger: AGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCAGTGGGGAAACCTCTTAGGAGAGGGGCAACACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 72 bp GCTCTCTCTCTGTATGCATACAGAAGAAAGGCCATGTaGGGATACAGCAAGAAGATGGCCATCTATAAGCCA +
Preference number: 3 (lower is better)
Translates to: ALSLYAYRRKAM*GYSKKMAIYKP
Trigger: TGGCTTATAGATGGCCATCTTCTTGCTGTATCCTCACATGGCCTTTCTTCTGTATGCATACAGAGAGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR GCA 72 bp TCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTaGTGTGATACCTCCCAGGTCTGCTCATTAAACATT +
Preference number: 3 (lower is better)
Translates to: SLCSPTSPCEGS*CDTSQVCSLNI
Trigger: AATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR TCA 72 bp TATAAGCCAGGAAGAGGCCTCACCAGAAACCAAACCTaGTGGTATCTTGATCTTGGACTACTAGCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: YKPGRGLTRNQT*WYLDLGLLAFE
Trigger: TTCAAAGGCTAGTAGTCCAAGATCAAGATACCATCAGGTTTGGTTTCTGGTGAGGCCTCTTCCTGGCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR TCA 72 bp CCCTATCGGGTAGGAATGGTATCTGTCCTTATAAGATaGGAGAGCTTGCTCTCTCTCTGTATGCATACAGAA +
Preference number: 3 (lower is better)
Translates to: PYRVGMVSVLIR*ESLLSLCMHTE
Trigger: TTCTGTATGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR TCA 72 bp GGAGATAGGGCCTTGAGGAAGGTATTAAAAGTTAAATaGGGTTATAAGGAAGGGCCCTATCGGGTAGGAATG +
Preference number: 3 (lower is better)
Translates to: GDRALRKVLKVK*GYKEGPYRVGM
Trigger: CATTCCTACCCGATAGGGCCCTTCCTTATAACCTCATTTAACTTTTAATACCTTCCTCAAGGCCCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR CCA 72 bp CAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGTaGTTAAGTAATCTGCCCAATACAAGCAGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: QPHFVDEGSEVK*LSNLPNTSSFH
Trigger: ATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTTGACCTCAGATCCCTCATCTACAAAATGGGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
3UTR TCA 72 bp CACTCAGAAGATTACAGAGAAGGAAATGGCAAAGTCTaGTTTCACTGGATTCTCCCATACAGTTCTGCCACT +
Preference number: 3 (lower is better)
Translates to: HSEDYREGNGKV*FHWILPYSSAT
Trigger: AGTGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTGCCATTTCCTTCTCTGTAATCTTCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR GCA 72 bp CAAAGTCTGATTTCACTGGATTCTCCCATACAGTTCTaGCACTTACTAAGCATATCTGATATCTTTCTACTC +
Preference number: 3 (lower is better)
Translates to: QSLISLDSPIQF*HLLSISDIFLL
Trigger: GAGTAGAAAGATATCAGATATGCTTAGTAAGTGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
3UTR-3UTR CAA 90 bp AACATTAACAAAAAGTCAGTAAGAGGGCATGATTTTATGTGTGGGAAATCAGACTTTGGAGATAGGGCCTaGAGGAAGGTATTAAAAGTT +
Preference number: 3 (lower is better)
Translates to: NINKKSVRGHDFMCGKSDFGDRA*RKVLKV
Trigger: AACTTTTAATACCTTCCTCAAGGCCCTATCTCCAAA...GTCTGATTTCCCACACATAAAATCATGCCCTCTTACTGACTTTTTGTTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp AGTCCAGAAAGCTTCCAGGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGGCGATGCCAGGATCTaGACCTGTCTGTCAAACCTT +
Preference number: 4 (lower is better)
Translates to: SPESFQGGTQGEVCTQGEGDARI*TCLSNL
Trigger: AAGGTTTGACAGACAGGTTCAGATCCTGGCATCGCC...TTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp GGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGGGTCAAAGATGAGCACAAGGTACCCTCCAGCTaGAGCTATGCTTCAAGACAA +
Preference number: 4 (lower is better)
Translates to: GWYSGRSLHAGRRVKDEHKVPSS*SYASRQ
Trigger: TTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTT...GTGCTCATCTTTGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTGGCGATGCCAGGATCTaGACCTGTCTGTCAAACCTT +
Preference number: 4 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPGDARI*TCLSNL
Trigger: AAGGTTTGACAGACAGGTTCAGATCCTGGCATCGCC...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGACCATGTGAGGGATCCTaGTGTGATACCTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGPCEGS*CDTSQV
Trigger: GACCTGGGAGGTATCACAGCAGGATCCCTCACATGG...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACAACCTTGGAGGCGCTTaGCGGCCCGGCGTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHNLGGA*RPGVAR
Trigger: TCTAGCAACGCCGGGCCGGCAAGCGCCTCCAAGGTT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531981.5
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGCGCGGCACGAACAATaGCCGGGCAGGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFARHEQ*PGREQR
Trigger: TCTTTGTTCCCTGCCCGGCCATTGTTCGTGCCGCGC...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000425468.6
CDS-3UTR CCA 90 bp AGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGACTTTGTGCTCACATGTaGCCTCAACCACTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPKCSVLYPQGWSLPPLRLCAHM*PQPLVA
Trigger: TGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAG...TCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCATCCTTAGGCTGGGACTaGAGGGTCAGTGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSSLGWD*RVSGVC
Trigger: GCAGACACCACTGACCCTTCAGTCCCAGCCTAAGGA...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp GGGTGGTACTCAGGGAGAAGTCTGCACGCAGGGAGAAGGGTCAAAGATGAGCACTCAACATCAAATAAATaGTGTCCCTCACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GWYSGRSLHAGRRVKDEHSTSNK*CPSPVS
Trigger: AGAGACAGGTGAGGGACAGCATTTATTTGATGTTGA...GTGCTCATCTTTGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGTACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATAACCTTGGAGGCGCTTaGCGGCCCGGCGTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHNLGGA*RPGVAR
Trigger: TCTAGCAACGCCGGGCCGGCAAGCGCCTCCAAGGTT...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531979.5
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACGCGCGGCACGAACAATaGCCGGGCAGGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHARHEQ*PGREQR
Trigger: TCTTTGTTCCCTGCCCGGCCATTGTTCGTGCCGCGC...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531981.5
CDS-3UTR CCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCCTGGTAAGGAGTCTTTaGGTCTCCTGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGLVRSL*VSCFPS
Trigger: GCTGGGAAAACAGGAGACCCAAAGACTCCTTACCAG...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCATGCCTCGGGAACTTaGACACCCAGGGATAAAACC +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLHASGT*TPRDKT
Trigger: GGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATG...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR TCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGC +
Preference number: 4 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGIEWHF*AESHVS
Trigger: GCTCACATGTGACTCTGCTCAGAAGTGCCATTCTAT...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp AGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGATCTGTCCTTATAAGATaGGAGAGCTTGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SPKCSVLYPQGWSLPPLRSVLIR*ESLLSL
Trigger: GAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGA...TCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGACAGAAGTTCTTCCCATaGCTCGGGAACTTGAACACC +
Preference number: 4 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGQKFFP*LGNLNT
Trigger: GGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTG...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTATCGGGTAGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTACTCAGGGAGAAGTCTaGACGCAGGGAGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSGRNGICPYKMRELALSTQGEV*TQGEGS
Trigger: TGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGT...AGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp AAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCAAAGTCCATTCTCTGAAGCTGTaGTCCACAGCGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KGGHCHHSEDYREGNGKVHSLKL*STAIPE
Trigger: TTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATG...GACTTTGCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp GGATCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTCATTCTCTGAAGCTGTaGTCCACAGCGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GSCCDTSQVCSLNIFPCGHSLKL*STAIPE
Trigger: TTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATG...ACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACTTCAAGACAAACCTTaGAGGCGCTTGCGAGACCCG +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSLQDKP*RRLRDP
Trigger: CGGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CCA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCCTTTGTGCTCACATGTaGCCTCAACCACTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCLCAHM*PQPLVA
Trigger: TGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAG...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCCTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCLPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGACTGGTAAGGAGTCTTTaGGTCTCCTGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGLVRSL*VSCFPS
Trigger: GCTGGGAAAACAGGAGACCCAAAGACTCCTTACCAG...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCTTCAAGACAAACCTTaGAGGCGCTTGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLQDKP*RRLPAR
Trigger: CCGGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531979.5
CDS-3UTR CCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTCTTGTCTGTGTCTGTaGGCCACCATCTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLSCLCL*ATIWGQ
Trigger: TTGTCCCCAGATGGTGGCCCACAGACACAGACAAGA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR TCA 90 bp GTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGGGCTCTCAGAAGAACTaGCCATTACTGCTATCTGGT +
Preference number: 4 (lower is better)
Translates to: VLYPQGWSLPPLRRLQRRGSQKN*PLLLSG
Trigger: ACCAGATAGCAGTAATGGTCAGTTCTTCTGAGAGCC...CCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp AAAGCAGCTGACTCAGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACAGAAGAAAGGCCATGTaGGGATACAGCAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: KAADSVPSAQYYIHKGGHRRKAM*GYSKKM
Trigger: CATCTTCTTGCTGTATCCTCACATGGCCTTTCTTCT...GTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACTGAGTCAGCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCAGAAGTTCTTCCCATaGCTCGGGAACTTGAACACC +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLQKFFP*LGNLNT
Trigger: GGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTG...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCAAAGTCCACAGCTGTCGAAAGTaGCTTCGGAAGATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGGHCHHSEDYREGNGKVHSCRK*LRKISL
Trigger: AAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTG...GACTTTGCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp GGATCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTCACAGCTGTCGAAAGTaGCTTCGGAAGATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSCCDTSQVCSLNIFPCGHSCRK*LRKISL
Trigger: AAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTG...ACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp GTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATCTGCTCCTTTGTaGTCACATGTGGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: VLYPQGWSLPPLRRLQRRKSAPL*SHVAST
Trigger: GGTTGAGGCCACATGTGAGCACAAAGGAGCAGATTT...CCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTAGCAGATCCAAAATCTaGTCCTTTGTGCTCACATGT +
Preference number: 4 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPSRSKI*SFVLTC
Trigger: ACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCT...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACACTCAGGGAGAAGTCTaGACGCAGGGAGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHTQGEV*TQGEGS
Trigger: TGACCCTTCTCCCTGCGTGCAGACTTCTCCCTGAGT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTGCGCGGCACGAACAATaGCCGGGCAGGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFARHEQ*PGREQR
Trigger: TCTTTGTTCCCTGCCCGGCCATTGTTCGTGCCGCGC...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000425468.6
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSSKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TCAGTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGAAAGCTTCCAGGGTaGTACTCAGGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SVLYPQGWSLPPLRRLQRRKLPG*YSGRSL
Trigger: CAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCT...TCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCTTCAAGACAAACCTTaGAGGCGCTTGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVLQDKP*RRLPAR
Trigger: CCGGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAG...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531981.5
CDS-3UTR TCA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCATGTCGAATGAGACCTaGGCTCTGAGTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCMSNET*ALSKAL
Trigger: AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACAT...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp AAAGCAGCTGACTCAGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACGTCAGTAAGAGGGCATaGTTTTATGTGTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: KAADSVPSAQYYIHKGGHVSKRA*FYVWEI
Trigger: GATTTCCCACACATAAAATCATGCCCTCTTACTGAC...GTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACTGAGTCAGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACAGAAGTTCTTCCCATaGCTCGGGAACTTGAACACC +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSQKFFP*LGNLNT
Trigger: GGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTCAGAAGTTCTTCCCATaGCTCGGGAACTTGAACACC +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFQKFFP*LGNLNT
Trigger: GGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTG...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGATTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGLPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCAAAGTCTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTT +
Preference number: 4 (lower is better)
Translates to: KGGHCHHSEDYREGNGKVSEDFP*QWITAF
Trigger: AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGA...GACTTTGCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTT +
Preference number: 4 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCSEDFP*QWITAF
Trigger: AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGA...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCCATGTGAGGGATCCTaGTGTGATACCTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHPCEGS*CDTSQV
Trigger: GACCTGGGAGGTATCACAGCAGGATCCCTCACATGG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp GGATCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTAAGAGGTTTCCCCACTaGCTCTCTATCCTATCCTTA +
Preference number: 4 (lower is better)
Translates to: GSCCDTSQVCSLNIFPCGKRFPH*LSILSL
Trigger: TAAGGATAGGATAGAGAGGCAGTGGGGAAACCTCTT...ACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAGACTGTAGCTCTTACTaGACTGGCTGCACTGATACG +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSDCSSY*TGCTDT
Trigger: CGTATCAGTGCAGCCAGTGCAGTAAGAGCTACAGTC...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGACTGTAGCTCTTACTaGACTGGCTGCACTGATACG +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFDCSSY*TGCTDT
Trigger: CGTATCAGTGCAGCCAGTGCAGTAAGAGCTACAGTC...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTTTCTAGTCTCAACCTaGCCCACACAACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFFLVST*PTQLGW
Trigger: CCACCCAAGTTGTGTGGGGCAGGTTGAGACTAGAAA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTTCAACATCAAATAAATaGTGTCCCTCACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPSTSNK*CPSPVS
Trigger: AGAGACAGGTGAGGGACAGCATTTATTTGATGTTGA...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTAGAACTGACCATTACTaGTATCTGGTAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPRTDHY*YLVRSL
Trigger: AAGACTCCTTACCAGATAGCAGTAATGGTCAGTTCT...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAAGGTACCCTCCAGCTaGAGCTATGCTTCAAGACAA +
Preference number: 4 (lower is better)
Translates to: YYIHKGGHCHHSEDYREGKVPSS*SYASRQ
Trigger: TTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTT...TCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGESKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACTTTGTGCTCACATGTaGCCTCAACCACTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSLCAHM*PQPLVA
Trigger: TGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGACACCATCTCATGTTGTaGTTCATCGAGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: YYIHKGGHCHHSEDYREGHHLML*FIELSL
Trigger: GAGAGAGAGCTCGATGAACCACAACATGAGATGGTG...TCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSLPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCAGATGGGCCCCAAGTaGGATCAGTACTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHQMGPK*DQYCPS
Trigger: AGAAGGGCAGTACTGATCCCACTTGGGGCCCATCTG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTCTGTAGAGAACAGATaGGCCCCAAGTGGGATCAGT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSVENR*APSGIS
Trigger: ACTGATCCCACTTGGGGCCCATCTGTTCTCTACAGA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACCTCCTCCTTTTAGCTaGGGGATCACAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSPPPFS*GITTGL
Trigger: CAAACCTGTTGTGATCCCCCAGCTAAAAGGAGGAGG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR CCA 90 bp AAAGCAGCTGACTCAGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACGGATCTGAGGTCAAGTaGTTAAGTAATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KAADSVPSAQYYIHKGGHGSEVK*LSNLPN
Trigger: ATTGGGCAGATTACTTAACCACTTGACCTCAGATCC...GTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACTGAGTCAGCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TGGTTACGGACTAAATTGTATTCCCTCACATATGCTGAGGTCCTAACCCCTCAACTATATCCACAAGGGTaGTCACTGCCACCACTCAGA +
Preference number: 4 (lower is better)
Translates to: WLRTKLYSLTYAEVLTPQLYPQG*SLPPLR
Trigger: TCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAG...TTGAGGGGTTAGGACCTCAGCATATGTGAGGGAATACAATTTAGTCCGTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCATGCCTCGGGAACTTaGACACCCAGGGATAAAACC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHHASGT*TPRDKT
Trigger: GGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGCATGCCTCGGGAACTTaGACACCCAGGGATAAAACC +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKHASGT*TPRDKT
Trigger: GGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATG...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR TCA 90 bp AGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTATGCACAAGGGTGGCACTGGTaGTTTGTGACAATAGTGACC +
Preference number: 4 (lower is better)
Translates to: RNGICPYKMRELALSLYAQGWHW*FVTIVT
Trigger: GGTCACTATTGTCACAAATCACCAGTGCCACCCTTG...TGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFLQLEL*FKTNLG
Trigger: TCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAG...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSLQLEL*FKTNLG
Trigger: TCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TGGTTACGGACTAAATTGTATTCCCTCACATATGCTGAGGTCCTAACCCCTCAACTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: WLRTKLYSLTYAEVLTPQLQLEL*FKTNLG
Trigger: TCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAG...TTGAGGGGTTAGGACCTCAGCATATGTGAGGGAATACAATTTAGTCCGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLLPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLSEDFP*QWITAF
Trigger: AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTAAATCTGCTCCTTTGTaGTCACATGTGGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFKSAPL*SHVAST
Trigger: GGTTGAGGCCACATGTGAGCACAAAGGAGCAGATTT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTCTTACTGCACTGGCTaGACTGATACGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSYCTG*TDTAFL
Trigger: GAGAAAAGCCGTATCAGTGCAGCCAGTGCAGTAAGA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp ATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGAAATGGCAGAACTGACCATTACTaGTATCTGGTAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: IHKGGHCHHSEDYREGNGRTDHY*YLVRSL
Trigger: AAGACTCCTTACCAGATAGCAGTAATGGTCAGTTCT...GCCATTTCCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCTTCAAGACAAACCTTaGAGGCGCTTGCGAGACCCG +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLQDKP*RRLRDP
Trigger: CGGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTAAGGTACCCTCCAGCTaGAGCTATGCTTCAAGACAA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFKVPSS*SYASRQ
Trigger: TTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAAGGTACCCTCCAGCTaGAGCTATGCTTCAAGACAA +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSKVPSS*SYASRQ
Trigger: TTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTT...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TCAGTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SVLYPQGWSLPPLRRLQRDFPCQ*ITAFQS
Trigger: AGACTGAAACGCAGTAATCCACTGGCAAGGGAAATC...TCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTTTGTGCTCACATGTaGCCTCAACCACTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLCAHM*PQPLVA
Trigger: TGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAG...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACACCATCTCATGTTGTaGTTCATCGAGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSHHLML*FIELSL
Trigger: GAGAGAGAGCTCGATGAACCACAACATGAGATGGTG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTCTTGTCTGTGTCTGTaGGCCACCATCTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSCLCL*ATISCC
Trigger: ACAACATGAGATGGTGGCCCACAGACACAGACAAGA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTTCTTGTCTGTGTCTGTaGGCCACCATCTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSSCLCL*ATISCC
Trigger: ACAACATGAGATGGTGGCCCACAGACACAGACAAGA...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTGTCACATGTGAGCTGTaGCTCCTTAGGCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFVTCEL*LLRLGL
Trigger: CAGTCCCAGCCTAAGGAGCCACAGCTCACATGTGAC...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACTGCCCCACACAACTTaGGTGGTGATCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELPHTT*VVIWKT
Trigger: AGTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGGTAAGGAGTCTTTaGGTCTCCTGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLVRSL*VSCFPS
Trigger: GCTGGGAAAACAGGAGACCCAAAGACTCCTTACCAG...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACAGAAAGCTTCCAGGGTaGTACTCAGGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHRKLPG*YSGRSL
Trigger: CAGACTTCTCCCTGAGTACCACCCTGGAAGCTTTCT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGCCTCGGGAACTTaGACACCCAGGGATAAAACC +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFHASGT*TPRDKT
Trigger: GGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEIEWHF*AESHVS
Trigger: GCTCACATGTGACTCTGCTCAGAAGTGCCATTCTAT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAATGTCGAATGAGACCTaGGCTCTGAGTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSMSNET*ALSKAL
Trigger: AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACAT...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTATGTCGAATGAGACCTaGGCTCTGAGTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFMSNET*ALSKAL
Trigger: AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACAT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAACACAACTTGGGTGGTaGTCTGGAAAACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSTQLGW*SGKLAH
Trigger: ATGAGCAAGTTTTCCAGATCACCACCCAAGTTGTGT...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTGGAAATGGCAAAGTCTaGTTTCACTGGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSGNGKV*FHWILP
Trigger: TGGGAGAATCCAGTGAAATCAGACTTTGCCATTTCC...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELQLEL*FKTNLG
Trigger: TCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLQLEL*FKTNLG
Trigger: TCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAG...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCAGAAGTTCTTCCCATaGCTCGGGAACTTGAACACC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHQKFFP*LGNLNT
Trigger: GGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSEDFP*QWITAF
Trigger: AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACACAGCTGTCGAAAGTaGCTTCGGAAGATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEHSCRK*LRKISL
Trigger: AAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAATCTTACTGCACTGGCTaGACTGATACGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGESYCTG*TDTAFL
Trigger: GAGAAAAGCCGTATCAGTGCAGCCAGTGCAGTAAGA...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGACTGTAGCTCTTACTaGACTGGCTGCACTGATACG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHDCSSY*TGCTDT
Trigger: CGTATCAGTGCAGCCAGTGCAGTAAGAGCTACAGTC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTATCGGGTAGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTTCCTCATGTACCATaGATCAGAAGTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSGRNGICPYKMRELALSLPHVP*IRSPES
Trigger: GCTTTCTGGACTTCTGATGCATGGTACATGAGGAAG...AGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGCACAAGGGTGGTCACTaGCACCACTCAGAAGATTAC +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKHKGGH*HHSEDY
Trigger: GTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTG...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSDFPCQ*ITAFQS
Trigger: AGACTGAAACGCAGTAATCCACTGGCAAGGGAAATC...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVSKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCTTTGTGCTCACATGTaGCCTCAACCACTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLCAHM*PQPLVA
Trigger: TGCTACCAGTGGTTGAGGCCACATGTGAGCACAAAG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACACCATCTCATGTTGTaGTTCATCGAGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEHHLML*FIELSL
Trigger: GAGAGAGAGCTCGATGAACCACAACATGAGATGGTG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CCA 90 bp GTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGTTTTGCTTGACCAGGTaGGATTCGTTCAACATCAAA +
Preference number: 4 (lower is better)
Translates to: VLYPQGWSLPPLRRLQRRFCLTR*DSFNIK
Trigger: TTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAA...CCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp CTATCGGGTAGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTAAGACAACCAGTCTGTaGTATTCTCTTAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LSGRNGICPYKMRELALSKTTSL*YSLKAA
Trigger: CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTT...AGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACTGTGGGCCACCATCTaGGGACAAAAAGACAAGATT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELWATI*GQKDKI
Trigger: AATCTTGTCTTTTTGTCCCCAGATGGTGGCCCACAG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTCTTGTCTGTGTCTGTaGGCCACCATCTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSCLCL*ATIWGQ
Trigger: TTGTCCCCAGATGGTGGCCCACAGACACAGACAAGA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
3UTR CAA 72 bp CAGTCTTTCCTTAGCACCAACTCTCTGTCCTCAGTCTaGGTTACTTCATCAGAAACCAAACCTGATGGTATC +
Preference number: 4 (lower is better)
Translates to: QSFLSTNSLSSV*VTSSETKPDGI
Trigger: GATACCATCAGGTTTGGTTTCTGATGAAGTAACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTATGTTCAATGAGAAATaGACGCCGACTGTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFMFNEK*TPTVAL
Trigger: AAGAGCTACAGTCGGCGTTCATTTCTCATTGAACAT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACCTGTGTGGCTTCTCTaGTGTTCAATGAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSPVWLL*CSMRNE
Trigger: TTCATTTCTCATTGAACATCAGAGAAGCCACACAGG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAACACAACTTGGGTGGTaGTCTGGAAAACTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGETQLGW*SGKLAH
Trigger: ATGAGCAAGTTTTCCAGATCACCACCCAAGTTGTGT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TGGCAAAGTCTGATTTCACTGGATTCTCCCATACAGTTCTGCCACTTACTAAGCTTGTTTGTTTTTGCTTaGCCAGGTGGGATTCGTTCA +
Preference number: 4 (lower is better)
Translates to: WQSLISLDSPIQFCHLLSLFVFA*PGGIRS
Trigger: TGAACGAATCCCACCTGGTCAAGCAAAAACAAACAA...GCTTAGTAAGTGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTTGTTTGTTTTTGCTTaGCCAGGTGGGATTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFLFVFA*PGGIRS
Trigger: TGAACGAATCCCACCTGGTCAAGCAAAAACAAACAA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp TCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTTCCCAAAAAGACAAGATTTaGCTCATGTTGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: SCCDTSQVCSLNIFPCGSQKDKI*LMLWFI
Trigger: GATGAACCACAACATGAGTCAAATCTTGTCTTTTTG...GGAACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAATTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATAAATCTGCTCCTTTGTaGTCACATGTGGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHKSAPL*SHVAST
Trigger: GGTTGAGGCCACATGTGAGCACAAAGGAGCAGATTT...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTAGCAGATCCAAAATCTaGTCCTTTGTGCTCACATGT +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFSRSKI*SFVLTC
Trigger: ACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGATACCTCCCAGGTCTaGTCATTAAACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFDTSQV*SLNIFP
Trigger: TGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATC...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAAAGAGGTTTCCCCACTaGCTCTCTATCCTATCCTTA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEKRFPH*LSILSL
Trigger: TAAGGATAGGATAGAGAGGCAGTGGGGAAACCTCTT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTCTTACTGCACTGGCTaGACTGATACGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHSYCTG*TDTAFL
Trigger: GAGAAAAGCCGTATCAGTGCAGCCAGTGCAGTAAGA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGTCTTACTGCACTGGCTaGACTGATACGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKSYCTG*TDTAFL
Trigger: GAGAAAAGCCGTATCAGTGCAGCCAGTGCAGTAAGA...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCGACTGTAGCTCTTACTaGACTGGCTGCACTGATACG +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVDCSSY*TGCTDT
Trigger: CGTATCAGTGCAGCCAGTGCAGTAAGAGCTACAGTC...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATAAGTGGGATCAGTACTaGCCTTCTCCTCAAACTTCG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHKWDQY*PSPQTS
Trigger: CGAAGTTTGAGGAGAAGGGCAGTACTGATCCCACTT...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR GCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTTGCTCTCTCTCTGTATaGATACAGAAGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSCSLSV*IQKKGH
Trigger: ATGGCCTTTCTTCTGTATGCATACAGAGAGAGAGCA...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAATACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHDFPCQ*ITAFQS
Trigger: AGACTGAAACGCAGTAATCCACTGGCAAGGGAAATC...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGAGTAAGAGCCTCCCTTaGTCCAGGGGTCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAASKSLP*SRGLLV
Trigger: TACCAAGAGACCCCTGGACCAAGGGAGGCTCTTACT...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCACCATCTCATGTTGTaGTTCATCGAGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHHHLML*FIELSL
Trigger: GAGAGAGAGCTCGATGAACCACAACATGAGATGGTG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACCACACTCCTTGCAGTaGTACCGTTTCTGTATATTG +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEPHSLQ*YRFCIL
Trigger: CAATATACAGAAACGGTACCACTGCAAGGAGTGTGG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCCACACTCCTTGCAGTaGTACCGTTTCTGTATATTG +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHPHSLQ*YRFCIL
Trigger: CAATATACAGAAACGGTACCACTGCAAGGAGTGTGG...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGC +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFIEWHF*AESHVS
Trigger: GCTCACATGTGACTCTGCTCAGAAGTGCCATTCTAT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAATGTTCAATGAGAAATaGACGCCGACTGTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEMFNEK*TPTVAL
Trigger: AAGAGCTACAGTCGGCGTTCATTTCTCATTGAACAT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACCTGTGTGGCTTCTCTaGTGTTCAATGAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEPVWLL*CSMRNE
Trigger: TTCATTTCTCATTGAACATCAGAGAAGCCACACAGG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTTGTTTGTTTTTGCTTaGCCAGGTGGGATTCGTTCA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLFVFA*PGGIRS
Trigger: TGAACGAATCCCACCTGGTCAAGCAAAAACAAACAA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR TCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGCTGTCTGTCAAACCTTaGAGTCCATTCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKLSVKP*SPFSEA
Trigger: AGCTTCAGAGAATGGACTTCAAGGTTTGACAGACAG...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR TCA 90 bp CTATCGGGTAGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCCTAACCCCTCAATATaGTTATATTTGGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: LSGRNGICPYKMRELALSPNPSI*LYLEIG
Trigger: CCCTATCTCCAAATATAATCATATTGAGGGGTTAGG...AGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCTACCCGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp AGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTATGCATTTCTACTCCAAGTATaGACCCAAATCAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RNGICPYKMRELALSLYAFLLQV*TQISKG
Trigger: ACCCTTGCTGATTTGGGTTCATACTTGGAGTAGAAA...TGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR TCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCAAAAAGACAAGATTTaGCTCATGTTGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLQKDKI*LMLWFI
Trigger: GATGAACCACAACATGAGTCAAATCTTGTCTTTTTG...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCACAGCTGTCGAAAGTaGCTTCGGAAGATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFHSCRK*LRKISL
Trigger: AAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCACAGCTGTCGAAAGTaGCTTCGGAAGATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVHSCRK*LRKISL
Trigger: AAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTG...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCAAATCTGCTCCTTTGTaGTCACATGTGGCCTCAACC +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVKSAPL*SHVAST
Trigger: GGTTGAGGCCACATGTGAGCACAAAGGAGCAGATTT...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAAGCAGATCCAAAATCTaGTCCTTTGTGCTCACATGT +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGESRSKI*SFVLTC
Trigger: ACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACAGCAGATCCAAAATCTaGTCCTTTGTGCTCACATGT +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHSRSKI*SFVLTC
Trigger: ACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAGATACCTCCCAGGTCTaGTCATTAAACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEDTSQV*SLNIFP
Trigger: TGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATC...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACGATACCTCCCAGGTCTaGTCATTAAACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHDTSQV*SLNIFP
Trigger: TGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATC...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTTTATTGTTTGTTTTTaGTTGACCAGGTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLFIVCF*LTRWDS
Trigger: CGAATCCCACCTGGTCAAGCAAAAACAAACAATAAA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCAAGGTACCCTCCAGCTaGAGCTATGCTTCAAGACAA +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVKVPSS*SYASRQ
Trigger: TTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTT...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHDFPCQ*ITAFQS
Trigger: AGACTGAAACGCAGTAATCCACTGGCAAGGGAAATC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTCTTGTCTGTGTCTGTaGGCCACCATCTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSCLCL*ATISCC
Trigger: ACAACATGAGATGGTGGCCCACAGACACAGACAAGA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCTCTGTCCTCAGTCTTaGTTACTTCATCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLCPQS*LLHLSL
Trigger: GAGAGACAGATGAAGTAACCAAGACTGAGGACAGAG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000531979.5
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCCACACTCCTTGCAGTaGTACCGTTTCTGTATATTG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHPHSLQ*YRFCIL
Trigger: CAATATACAGAAACGGTACCACTGCAAGGAGTGTGG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATAAGACAACCAGTCTGTaGTATTCTCTTAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHKTTSL*YSLKAA
Trigger: CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTT...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCTGTGGGCCACCATCTaGGGACAAAAAGACAAGATT +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVLWATI*GQKDKI
Trigger: AATCTTGTCTTTTTGTCCCCAGATGGTGGCCCACAG...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTATGTCGAATGAGACCTaGGCTCTGAGTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFMSNET*ALSKAL
Trigger: AAGAGCTTTACTCAGAGCTCAGGTCTCATTCGACAT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGATGTTCAATGAGAAATaGACGCCGACTGTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKMFNEK*TPTVAL
Trigger: AAGAGCTACAGTCGGCGTTCATTTCTCATTGAACAT...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR TCA 90 bp TGGTTACGGACTAAATTGTATTCCCTCACATATGCTGAGGTCCTAACCCCTCAAGTATTAAAAGTTAAATaGGGTTATAAGGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WLRTKLYSLTYAEVLTPQVLKVK*GYKEGP
Trigger: GGGCCCTTCCTTATAACCTCATTTAACTTTTAATAC...TTGAGGGGTTAGGACCTCAGCATATGTGAGGGAATACAATTTAGTCCGTAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSEDFP*QWITAF
Trigger: AAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGAGCAGATCCAAAATCTaGTCCTTTGTGCTCACATGT +
Preference number: 4 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKSRSKI*SFVLTC
Trigger: ACATGTGAGCACAAAGGAGCAGATTTTGGATCTGCT...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGATACCTCCCAGGTCTaGTCATTAAACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHDTSQV*SLNIFP
Trigger: TGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTAAGAGGTTTCCCCACTaGCTCTCTATCCTATCCTTA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFKRFPH*LSILSL
Trigger: TAAGGATAGGATAGAGAGGCAGTGGGGAAACCTCTT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTCAACATCAAATAAATaGTGTCCCTCACCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHSTSNK*CPSPVS
Trigger: AGAGACAGGTGAGGGACAGCATTTATTTGATGTTGA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCTTCCTCATGTACCATaGATCAGAAGTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLPHVP*IRSPES
Trigger: GCTTTCTGGACTTCTGATGCATGGTACATGAGGAAG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTAGCTATAAGAAGGTCTaGACAGAATTTACTCAACAC +
Preference number: 4 (lower is better)
Translates to: SKYEPKSARVALVICDNSSYKKV*TEFTQH
Trigger: GTGTTGAGTAAATTCTGTGCAGACCTTCTTATAGCT...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFDFPCQ*ITAFQS
Trigger: AGACTGAAACGCAGTAATCCACTGGCAAGGGAAATC...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCTCTGTCCTCAGTCTTaGTTACTTCATCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFLCPQS*LLHLSL
Trigger: GAGAGACAGATGAAGTAACCAAGACTGAGGACAGAG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000531979.5
CDS-3UTR CCA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTAAACATTTTCCCATGTaGTTCCACTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFKHFPM*FHYLRT
Trigger: TGTCCTAAGATAGTGGAACCACATGGGAAAATGTTT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCTCTGTCCTCAGTCTTaGTTACTTCATCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLCPQS*LLHLLG
Trigger: TCCTAAGAGATGAAGTAACCAAGACTGAGGACAGAG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTTTTGCTTGACCAGGTaGGATTCGTTCAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHFCLTR*DSFNIK
Trigger: TTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTATGTTCAATGAGAAATaGACGCCGACTGTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFMFNEK*TPTVAL
Trigger: AAGAGCTACAGTCGGCGTTCATTTCTCATTGAACAT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR TCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCCTGTGTGGCTTCTCTaGTGTTCAATGAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFPVWLL*CSMRNE
Trigger: TTCATTTCTCATTGAACATCAGAGAAGCCACACAGG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR GCA 90 bp AGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTATGCATTTATTGTTTGTTTTTaGTTGACCAGGTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: RNGICPYKMRELALSLYAFIVCF*LTRWDS
Trigger: CGAATCCCACCTGGTCAAGCAAAAACAAACAATAAA...TGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp TGGTTACGGACTAAATTGTATTCCCTCACATATGCTGAGGTCCTAACCCCTCAAAAAACAGTAGAACCTTaGTACAGATTGATTGTCAGA +
Preference number: 4 (lower is better)
Translates to: WLRTKLYSLTYAEVLTPQKTVEP*YRLIVR
Trigger: TCTGACAATCAATCTGTAGCAAGGTTCTACTGTTTT...TTGAGGGGTTAGGACCTCAGCATATGTGAGGGAATACAATTTAGTCCGTAACCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAAYCVSV*IPAIEG
Trigger: ACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTA...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CCA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAAAACATTTTCCCATGTaGTTCCACTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEKHFPM*FHYLRT
Trigger: TGTCCTAAGATAGTGGAACCACATGGGAAAATGTTT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CCA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACAAACATTTTCCCATGTaGTTCCACTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHKHFPM*FHYLRT
Trigger: TGTCCTAAGATAGTGGAACCACATGGGAAAATGTTT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR GCA 90 bp AACATTAACAAAAAGTCAGTAAGAGGGCATGATTTTATGTGTGGGAAATCAGACTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: NINKKSVRGHDFMCGKSDLPVDY*VSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAA...GTCTGATTTCCCACACATAAAATCATGCCCTCTTACTGACTTTTTGTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR GCA 90 bp AACATTAACAAAAAGTCAGTAAGAGGGCATGATTTTATGTGTGGGAAATCAGACAGAGGCAAGGGAAGTTaGAGCTTTGATGCATATAGG +
Preference number: 4 (lower is better)
Translates to: NINKKSVRGHDFMCGKSDRGKGS*SFDAYR
Trigger: CCTATATGCATCAAAGCTGCAACTTCCCTTGCCTCT...GTCTGATTTCCCACACATAAAATCATGCCCTCTTACTGACTTTTTGTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGGGATCTGAGGTCAAGTaGTTAAGTAATCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAAGSEVK*LSNLPN
Trigger: ATTGGGCAGATTACTTAACCACTTGACCTCAGATCC...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR GCA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCTTTATTGTTTGTTTTTaGTTGACCAGGTGGGATTCG +
Preference number: 4 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVFIVCF*LTRWDS
Trigger: CGAATCCCACCTGGTCAAGCAAAAACAAACAATAAA...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR GCA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGTCTCCCATACAGTTCTaGCACTTACTAAGCATATCT +
Preference number: 4 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAASPIQF*HLLSIS
Trigger: AGATATGCTTAGTAAGTGGCAGAACTGTATGGGAGA...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CCA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTAAACATTTTCCCATGTaGTTCCACTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFKHFPM*FHYLRT
Trigger: TGTCCTAAGATAGTGGAACCACATGGGAAAATGTTT...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS GCA 90 bp ATCTTGACCTTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCGGCCCGGCGTTGCT +
Preference number: 5 (lower is better)
Translates to: ILTLNSLKGTLQLEL*FKTNLGGACRPGVA
Trigger: AGCAACGCCGGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531979.5
ENST00000531981.5
CDS-3UTR CAA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTCTTGCCGGCCCGGCGTaGCTAGAAGCGCGGCACGAA +
Preference number: 5 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFLAGPA*LEARHE
Trigger: TTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGCAAG...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531979.5
CDS GCA 90 bp ATCTTGACCTTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCGAGACCCGGAACGCG +
Preference number: 5 (lower is better)
Translates to: ILTLNSLKGTLQLEL*FKTNLGGACETRNA
Trigger: CGCGTTCCGGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGGCTTCAAGACAAACCTaGGAGGCGCTTGCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLASRQT*EALAGP
Trigger: CGGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAGC...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531981.5
CDS GCA 90 bp ATCTTGACCTTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCTCTCCTCGAAGGCG +
Preference number: 5 (lower is better)
Translates to: ILTLNSLKGTLQLEL*FKTNLGGACLSSKA
Trigger: CGCCTTCGAGGAGAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531941.1
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAGTTACCGGCCCGGCGTaGCTAGAAGCGCGGCACGAA +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEVTGPA*LEARHE
Trigger: TTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGTAAC...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CAA 90 bp AGTCCCAAGTGCTCAGTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAGGCCACCATCTCATGTaGTGGTTCATCGAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SPKCSVLYPQGWSLPPLRGHHLM*WFIELS
Trigger: AGAGAGCTCGATGAACCACAACATGAGATGGTGGCC...TCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTACTGAGCACTTGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGTTACCGGCCCGGCGTaGCTAGAAGCGCGGCACGAA +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHVTGPA*LEARHE
Trigger: TTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGTAAC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CAA 90 bp GTACTATATCCACAAGGGTGGTCACTGCCACCACTCAGAAGATTACAGAGAAGGTGGTCCAGGGGTCTCTaGGTAGCACAGCTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: VLYPQGWSLPPLRRLQRRWSRGL*VAQLSK
Trigger: TTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCA...CCTTCTCTGTAATCTTCTGAGTGGTGGCAGTGACCACCCTTGTGGATATAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCTGGTCCAGGGGTCTCTaGGTAGCACAGCTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCWSRGL*VAQLSK
Trigger: TTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCA...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CAA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCTTGCCGGCCCGGCGTaGCTAGAAGCGCGGCACGAA +
Preference number: 5 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVLAGPA*LEARHE
Trigger: TTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGCAAG...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531981.5
CDS GCA 90 bp CTCTTGGTAGCACAGCTGTCGAAAGTGCCTTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTTCAGTCTGGATTCCTGCCATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLVAQLSKVPSEDFP*QWITAFQSGFLPLK
Trigger: CTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTACCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CCA 90 bp GTAGCACAGCTGTCGAAAGTGCCTTCGGAAGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCTGGATTCCTGCCATTGAAGGTGACT +
Preference number: 5 (lower is better)
Translates to: VAQLSKVPSEDFPCQ*ITAFQSGFLPLKVT
Trigger: AGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCGTTACCGGCCCGGCGTaGCTAGAAGCGCGGCACGAA +
Preference number: 5 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVVTGPA*LEARHE
Trigger: TTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGTAAC...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGCTTCAAGACAAACCTaGGAGGCGCTTGCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHASRQT*EALAGP
Trigger: CGGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAGC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531979.5
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCATGGTCCAGGGGTCTCTaGGTAGCACAGCTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSWSRGL*VAQLSK
Trigger: TTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCA...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGACCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TCCTGCTGTGATACCTCCCAGGTCTGCTCATTAAACATTTTCCCATGTGGTTCCCCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SCCDTSQVCSLNIFPCGSPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...GGAACCACATGGGAAAATGTTTAATGAGCAGACCTGGGAGGTATCACAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS GCA 90 bp GCTGTCGAAAGTGCCTTCGGAAGATTTCCCTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCTGCCATTGAAGGTGACTTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: AVESAFGRFPLPVDY*VSVWIPAIEGDFLL
Trigger: AAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGCTTCAAGACAAACCTaGGAGGCGCTTGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHASRQT*EALARP
Trigger: GGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CAA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTTTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPLLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTGGTCCAGGGGTCTCTaGGTAGCACAGCTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHWSRGL*VAQLSK
Trigger: TTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGCCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS CCA 90 bp GCCTTCGGAAGATTTCCCTTGCCAGTGGATTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGTGACTTTTTGCTTCCACTTTCATTG +
Preference number: 5 (lower is better)
Translates to: AFGRFPLPVDYCVSV*IPAIEGDFLLPLSL
Trigger: CAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTGCTTCAAGACAAACCTaGGAGGCGCTTGCGAGACCC +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFASRQT*EALARP
Trigger: GGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGC...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000647743.1
CDS-3UTR CAA 90 bp CTTGAAGTCCATTCTCTGAAGCTGTGCTCCACAGCGATCCCTGAAAGCCTTCCTGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: LEVHSLKLCSTAIPESLPVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...AGGAAGGCTTTCAGGGATCGCTGTGGAGCACAGCTTCAGAGAATGGACTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGTTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTT +
Preference number: 5 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLFGRFP*PVDYCV
Trigger: AACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAA...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCACCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCCTGCCCCACACAACTaGGGTGGTGATCTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHPAPHN*GGDLEN
Trigger: GTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAGG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TGCCTCTCTATCCTATCCTTATGTTCACCAACTTCTCCATGTGAGGGATCCTGCTCTCTGTCCTCAGTCTaGGTTACTTCATCAGAAACC +
Preference number: 5 (lower is better)
Translates to: CLSILSLCSPTSPCEGSCSLSSV*VTSSET
Trigger: GGTTTCTGATGAAGTAACCAAGACTGAGGACAGAGA...GCAGGATCCCTCACATGGAGAAGTTGGTGAACATAAGGATAGGATAGAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS GCA 90 bp ATTACTGCGTTTCAGTCTGGATTCCTGCCATTGAAGGTGACTTTTTaGTTCCACTTTCATTGTCAGAAGTTCTTCCCATGCCTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: ITAFQSGFLPLKVTF*FHFHCQKFFPCLGN
Trigger: GTTCCCGAGGCATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS GCA 90 bp ATCTTGACCTTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCTAAGCAGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: ILTLNSLKGTLQLEL*FKTNLGGACLSSKN
Trigger: ATTTTTACTGCTTAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526391.5
CDS-3UTR CAA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGATTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGLLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCATTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTT +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSFGRFP*PVDYCV
Trigger: AACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAA...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTGGTCCAGGGGTCTCTaGGTAGCACAGCTGTCGAAA +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFWSRGL*VAQLSK
Trigger: TTTCGACAGCTGTGCTACCAAGAGACCCCTGGACCA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGCCACCATCTCATGTaGTGGTTCATCGAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHGHHLM*WFIELS
Trigger: AGAGAGCTCGATGAACCACAACATGAGATGGTGGCC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS TCA 90 bp GCTTCCACTTTCATTGTCAGAAGTTCTTCCCATGCCTCGGGAACTTaGACACCCAGGGATAAAACCTCCTTTGAGTTTGTATTCATCTTG +
Preference number: 5 (lower is better)
Translates to: ASTFIVRSSSHASGT*TPRDKTSFEFVFIL
Trigger: CAAGATGAATACAAACTCAAAGGAGGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTGACAATGAAAGTGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCATCTGGATTCCTGCCATaGAAGGTGACTTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSSGFLP*KVTFCF
Trigger: GAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGA...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTATGCATTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTT +
Preference number: 5 (lower is better)
Translates to: RNGICPYKMRELALSLYAFGRFP*PVDYCV
Trigger: AACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAA...TGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTT +
Preference number: 5 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHFGRFP*PVDYCV
Trigger: AACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATCCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTGGCCACCATCTCATGTaGTGGTTCATCGAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFGHHLM*WFIELS
Trigger: AGAGAGCTCGATGAACCACAACATGAGATGGTGGCC...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
CDS-3UTR CAA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGCCTGCCCCACACAACTaGGGTGGTGATCTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAAPAPHN*GGDLEN
Trigger: GTTTTCCAGATCACCACCCAAGTTGTGTGGGGCAGG...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAACTTAGGACTCCTCTGTaGTTAGGCCATGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELRTPL*LGHVSP
Trigger: AGGAGAAACATGGCCTAACAACAGAGGAGTCCTAAG...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS-3UTR CAA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTTTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFLLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AGGAATGGTATCTGTCCTTATAAGATGAGAGAGCTTGCTCTCTCTCTGTATGCATCTGGATTCCTGCCATaGAAGGTGACTTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: RNGICPYKMRELALSLYASGFLP*KVTFCF
Trigger: GAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGA...TGCATACAGAGAGAGAGCAAGCTCTCTCATCTTATAAGGACAGATACCATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTT +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHFGRFP*PVDYCV
Trigger: AACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCCAAAATCTGCTCCTTaGTGCTCACATGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFPKSAP*CSHVAS
Trigger: TGAGGCCACATGTGAGCACAAAGGAGCAGATTTTGG...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AAGTGGTTAAGTAATCTGCCCAATACAAGCAGCTTCCATGAGGCGATGCCAGGAGAACCTTGCTACAGATaGATTGTCAGAACATTAACA +
Preference number: 5 (lower is better)
Translates to: KWLSNLPNTSSFHEAMPGEPCYR*IVRTLT
Trigger: TGTTAATGTTCTGACAATCAATCTGTAGCAAGGTTC...TCCTGGCATCGCCTCATGGAAGCTGCTTGTATTGGGCAGATTACTTAACCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: SKYEPKSARVALVICDNSVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAATTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGELLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACTTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHLLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACCTGATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LLDQVGFVQHQINAVPHLIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...CAGGTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTCTGGATTCCTGCCATaGAAGGTGACTTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHSGFLP*KVTFCF
Trigger: GAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTCTCTGTCCTCAGTCTaGGTTACTTCATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHSLSSV*VTSSVS
Trigger: AGAGACAGATGAAGTAACCAAGACTGAGGACAGAGA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000531979.5
CDS-3UTR CAA 90 bp TCCAAGTATGAACCCAAATCAGCAAGGGTGGCACTGGTGATTTGTGACAATAGTTTTGGAGATAGGGCCTaGAGGAAGGTATTAAAAGTT +
Preference number: 5 (lower is better)
Translates to: SKYEPKSARVALVICDNSFGDRA*RKVLKV
Trigger: AACTTTTAATACCTTCCTCAAGGCCCTATCTCCAAA...ACTATTGTCACAAATCACCAGTGCCACCCTTGCTGATTTGGGTTCATACTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATTTGCTTCCACTTTCATaGTCAGAAGTTCTTCCCATG +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHLLPLS*SEVLPM
Trigger: CATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAA...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CTTCAAACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: LQTPNFPLRKSLGLKSGFIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...AAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp GAGAAGGAAATGGCAAAGTCTGATTTCACTGGATTCTCCCATACAGTTCTGCCAATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: EKEMAKSDFTGFSHTVLPIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...TGGCAGAACTGTATGGGAGAATCCAGTGAAATCAGACTTTGCCATTTCCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp ACACCCAACTTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: TPNFPLRKSLGLKSGFVSIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...TGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAAGTTGGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTCTGGATTCCTGCCATaGAAGGTGACTTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSGFLP*KVTFCF
Trigger: GAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCTCTGGATTCCTGCCATaGAAGGTGACTTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVSGFLP*KVTFCF
Trigger: GAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGA...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTCCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTTCTCTGTCCTCAGTCTaGGTTACTTCATCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: FPLRKSLGLKSGFVSNTFSLSSV*VTSSVS
Trigger: AGAGACAGATGAAGTAACCAAGACTGAGGACAGAGA...AAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000531979.5
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAGTTTATTGTTTGTTTTaGCTTGACCAGGTGGGATTC +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEVYCLF*LDQVGF
Trigger: GAATCCCACCTGGTCAAGCAAAAACAAACAATAAAC...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647743.1
CDS-3UTR CAA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGAGGGAAGTTGCAGCTTaGATGCATATAGGGGTAATA +
Preference number: 5 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKREVAA*MHIGVI
Trigger: TATTACCCCTATATGCATCAAAGCTGCAACTTCCCT...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS-3UTR CAA 90 bp CCTTTAAGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACC +
Preference number: 5 (lower is better)
Translates to: PLRKSLGLKSGFVSNTFHVFILT*NSLKGT
Trigger: GGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATAC...ATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp AGGAAGTCCCTGGGCCTTAAGTCAGGATTTGTTTCAAACACATTTCATGGAGAAATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: RKSLGLKSGFVSNTFHGEIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...TTCTCCATGAAATGTGTTTGAAACAAATCCTGACTTAAGGCCCAGGGACTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000531979.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCCCTCACATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: FLLDQVGFVQHQINAVPHIEGDF*LPLSLS
Trigger: TGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAAT...GTGAGGGACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp CTAAACCAAAGCTATTATCAACCCCATTTTGTAGATGAGGGATCTGAGGTCAAGGTTTATTGTTTGTTTTaGCTTGACCAGGTGGGATTC +
Preference number: 5 (lower is better)
Translates to: LNQSYYQPHFVDEGSEVKVYCLF*LDQVGF
Trigger: GAATCCCACCTGGTCAAGCAAAAACAAACAATAAAC...CTTGACCTCAGATCCCTCATCTACAAAATGGGGTTGATAATAGCTTTGGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527436.5
ENST00000647743.1
CDS-3UTR CAA 90 bp TGTTTGTTTTTGCTTGACCAGGTGGGATTCGTTCAACATCAAATAAATGCTGTCGTTTATTGTTTGTTTTaGCTTGACCAGGTGGGATTC +
Preference number: 5 (lower is better)
Translates to: CLFLLDQVGFVQHQINAVVYCLF*LDQVGF
Trigger: GAATCCCACCTGGTCAAGCAAAAACAAACAATAAAC...GACAGCATTTATTTGATGTTGAACGAATCCCACCTGGTCAAGCAAAAACAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531981.5
ENST00000647743.1
CDS-3UTR CAA 90 bp GAAAATAAATTTCTGTTAAAGACAACCAGTCTGTGGTATTCTCTTAAGGCAGCGGAAAACAGTAGAACCTaGCTACAGATTGATTGTCAG +
Preference number: 5 (lower is better)
Translates to: ENKFLLKTTSLWYSLKAAENSRT*LQIDCQ
Trigger: CTGACAATCAATCTGTAGCAAGGTTCTACTGTTTTC...CGCTGCCTTAAGAGAATACCACAGACTGGTTGTCTTTAACAGAAATTTATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527436.5
CDS CAA 72 bp ACGCGCAAGGAGGGAGAGGGGGTTACCGGCCCGGCGTaGCTAGAAGCGCGGCACGAACAATGGCCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: TRKEGEGVTGPA*LEARHEQWPGR
Trigger: CCTGCCCGGCCATTGTTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGTAACCCCCTCTCCCTCCTTGCGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000425468.6
CDS CAA 90 bp AGACCCGGAACGCGCAAGGAGGGAGAGGGGGTTACCGGCCCGGCGTaGCTAGAAGCGCGGCACGAACAATGGCCGGGCAGGGAACAAAGA +
Preference number: 6 (lower is better)
Translates to: RPGTRKEGEGVTGPA*LEARHEQWPGREQR
Trigger: TCTTTGTTCCCTGCCCGGCCATTGTTCGTGCCGCGCTTCTAGCAACGCCGGGCCGGTAACCCCCTCTCCCTCCTTGCGCGTTCCGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000425468.6
CDS CCA 72 bp TACCCTCCAGCTGGAGCTATGCTTCAAGACAAACCTTaGAGGCGCTTGCGAGACCCGGAACGCGCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: YPPAGAMLQDKP*RRLRDPERARR
Trigger: CCTCCTTGCGCGTTCCGGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000527436.5
ENST00000647743.1
CDS CCA 72 bp TACCCTCCAGCTGGAGCTATGCTTCAAGACAAACCTTaGAGGCGCTTGCCTCTCCTCGAAGGCGGACGGAGC +
Preference number: 6 (lower is better)
Translates to: YPPAGAMLQDKP*RRLPLLEGGRS
Trigger: GCTCCGTCCGCCTTCGAGGAGAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531941.1
CDS CAA 72 bp GTACCCTCCAGCTGGAGCTATGCTTCAAGACAAACCTaGGAGGCGCTTGCGAGACCCGGAACGCGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: VPSSWSYASRQT*EALARPGTRKE
Trigger: CTCCTTGCGCGTTCCGGGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000527436.5
ENST00000647743.1
CDS CAA 72 bp GTACCCTCCAGCTGGAGCTATGCTTCAAGACAAACCTaGGAGGCGCTTGCCTCTCCTCGAAGGCGGACGGAG +
Preference number: 6 (lower is better)
Translates to: VPSSWSYASRQT*EALASPRRRTE
Trigger: CTCCGTCCGCCTTCGAGGAGAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531941.1
CDS GCA 72 bp TCTAGGATTCCATGTCTCGATGTCCGGCGTTCACCTTaGTTCGGACTCAACCCCCAATTTCCTGGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: SRIPCLDVRRSP*FGLNPQFPGVQ
Trigger: CTGGACGCCAGGAAATTGGGGGTTGAGTCCGAAGCAAGGTGAACGCCGGACATCGAGACATGGAATCCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531941.1
CDS GCA 72 bp TTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: LNSLKGTLQLEL*FKTNLGGACRP
Trigger: GGGCCGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531979.5
ENST00000531981.5
CDS GCA 72 bp TTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCGAGACC +
Preference number: 6 (lower is better)
Translates to: LNSLKGTLQLEL*FKTNLGGACET
Trigger: GGTCTCGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000527436.5
ENST00000647743.1
CDS GCA 72 bp GCACAGCTGTCGAAAGTGCCTTCGGAAGATTTCCCTTaGCAGTGGATTACTGCGTTTCAGTCTGGATTCCTG +
Preference number: 6 (lower is better)
Translates to: AQLSKVPSEDFP*QWITAFQSGFL
Trigger: CAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS GCA 72 bp TTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LNSLKGTLQLEL*FKTNLGGACLS
Trigger: GGAGAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531941.1
CDS GCA 72 bp AGTGCCTTCGGAAGATTTCCCTTGCCAGTGGATTACTaGGTTTCAGTCTGGATTCCTGCCATTGAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: SAFGRFPLPVDY*VSVWIPAIEGD
Trigger: GTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS GCA 72 bp TTGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATaGTTCAAGACAAACCTTGGAGGCGCTTGCCTAAGC +
Preference number: 6 (lower is better)
Translates to: LNSLKGTLQLEL*FKTNLGGACLS
Trigger: GCTTAGGCAAGCGCCTCCAAGGTTTGTCTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526391.5
CDS CCA 72 bp CTGTCGAAAGTGCCTTCGGAAGATTTCCCTTGCCAGTaGATTACTGCGTTTCAGTCTGGATTCCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: LSKVPSEDFPCQ*ITAFQSGFLPL
Trigger: CAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 72 bp AGCACAGCTGTCGAAAGTGCCTTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTTTCAGTCTGGATTCCT +
Preference number: 6 (lower is better)
Translates to: STAVESAFGRFP*PVDYCVSVWIP
Trigger: AGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 90 bp TCTCTTGGTAGCACAGCTGTCGAAAGTGCCTTCGGAAGATTTCCCTaGCCAGTGGATTACTGCGTTTCAGTCTGGATTCCTGCCATTGAA +
Preference number: 6 (lower is better)
Translates to: SLGSTAVESAFGRFP*PVDYCVSVWIPAIE
Trigger: TTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCTGTGCTACCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS TCA 72 bp GTTACTTCATCTGTCTCTCCAATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGCTGTGGCTCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: VTSSVSPIEWHF*AESHVSCGSLG
Trigger: GCCTAAGGAGCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCATTCTATTGGAGAGACAGATGAAGTAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252207.10
ENST00000526391.5
ENST00000531979.5
CDS CAA 90 bp TCTCTGTCCTCAGTCTTGGTTACTTCATCTCTTAGGACTCCTCTGTaGTTAGGCCATGTTTCTCCTCCTCCTTTTAGCTGGGGGATCACA +
Preference number: 6 (lower is better)
Translates to: SLSSVLVTSSLRTPL*LGHVSPPPFSWGIT
Trigger: TGTGATCCCCCAGCTAAAAGGAGGAGGAGAAACATGGCCTAACAACAGAGGAGTCCTAAGAGATGAAGTAACCAAGACTGAGGACAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425468.6
ENST00000527844.1
CDS TCA 72 bp CGTATTAAATCTGTCTCTCCAATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGCTGTGGCTCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: RIKSVSPIEWHF*AESHVSCGSLG
Trigger: GCCTAAGGAGCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCATTCTATTGGAGAGACAGATTTAATACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425468.6
CDS TCA 72 bp AAAAATGTGTCTGTCTCTCCAATAGAATGGCACTTCTaGGCAGAGTCACATGTGAGCTGTGGCTCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: KNVSVSPIEWHF*AESHVSCGSLG
Trigger: GCCTAAGGAGCCACAGCTCACATGTGACTCTGCTCAGAAGTGCCATTCTATTGGAGAGACAGACACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527844.1
CDS CAA 90 bp GATTACTGCGTTTCAGTCTGGATTCCTGCCATTGAAGGTGACTTTTaGCTTCCACTTTCATTGTCAGAAGTTCTTCCCATGCCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: DYCVSVWIPAIEGDF*LPLSLSEVLPMPRE
Trigger: TTCCCGAGGCATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CCA 72 bp AGATTTCCCTTGCCAGTGGATTACTGCGTTTCAGTCTaGATTCCTGCCATTGAAGGTGACTTTTTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: RFPLPVDYCVSV*IPAIEGDFLLP
Trigger: TGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAACGCAGTAATCCACTGGCAAGGGAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 72 bp CAGTCTTTCCTTAGCACCAACTCTCTGTCCTCAGTCTaGGTTACTTCATCTGTCTCTCCAATAGAATGGCAC +
Preference number: 6 (lower is better)
Translates to: QSFLSTNSLSSV*VTSSVSPIEWH
Trigger: GTGCCATTCTATTGGAGAGACAGATGAAGTAACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252207.10
ENST00000531979.5
CDS CAA 72 bp TCAGTCTTGGTTACTTCATCTCTTAGGACTCCTCTGTaGTTAGGCCATGTTTCTCCTCCTCCTTTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SVLVTSSLRTPL*LGHVSPPPFSW
Trigger: CCAGCTAAAAGGAGGAGGAGAAACATGGCCTAACAACAGAGGAGTCCTAAGAGATGAAGTAACCAAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425468.6
ENST00000527844.1
CDS CAA 90 bp ACACCCAGGGATAAAACCTCCTTTGAGTTTGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTATGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: TPRDKTSFEFVFILT*NSLKGTLQLELCFK
Trigger: CTTGAAGCATAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATACAAACTCAAAGGAGGTTTTATCCCTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS TCA 72 bp TTCATTGTCAGAAGTTCTTCCCATGCCTCGGGAACTTaGACACCCAGGGATAAAACCTCCTTTGAGTTTGTA +
Preference number: 6 (lower is better)
Translates to: FIVRSSSHASGT*TPRDKTSFEFV
Trigger: TACAAACTCAAAGGAGGTTTTATCCCTGGGTGTTCAAGTTCCCGAGGCATGGGAAGAACTTCTGACAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 72 bp CCCAGGGATAAAACCTCCTTTGAGTTTGTATTCATCTaGACCTTGAACAGCTTAAAAGGTACCCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PRDKTSFEFVFI*TLNSLKGTLQL
Trigger: CAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATACAAACTCAAAGGAGGTTTTATCCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 72 bp CAGTCTTTCCTTAGCACCAACTCTCTGTCCTCAGTCTaGGTTACTTCATCTCTTAGGACTCCTCTGTTGTTA +
Preference number: 6 (lower is better)
Translates to: QSFLSTNSLSSV*VTSSLRTPLLL
Trigger: TAACAACAGAGGAGTCCTAAGAGATGAAGTAACCAAGACTGAGGACAGAGAGTTGGTGCTAAGGAAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425468.6
ENST00000527844.1
CDS GCA 72 bp TTTCAGTCTGGATTCCTGCCATTGAAGGTGACTTTTTaGTTCCACTTTCATTGTCAGAAGTTCTTCCCATGC +
Preference number: 6 (lower is better)
Translates to: FQSGFLPLKVTF*FHFHCQKFFPC
Trigger: GCATGGGAAGAACTTCTGACAATGAAAGTGGAAGCAAAAAGTCACCTTCAATGGCAGGAATCCAGACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1
CDS CAA 72 bp GATAAAACCTCCTTTGAGTTTGTATTCATCTTGACCTaGAACAGCTTAAAAGGTACCCTCCAGCTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: DKTSFEFVFILT*NSLKGTLQLEL
Trigger: TAGCTCCAGCTGGAGGGTACCTTTTAAGCTGTTCAAGGTCAAGATGAATACAAACTCAAAGGAGGTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000252207.10
ENST00000425468.6
ENST00000526391.5
ENST00000527436.5
ENST00000527844.1
ENST00000531941.1
ENST00000531979.5
ENST00000531981.5
ENST00000647743.1