RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN32 (Homo sapiens)

Ensembl gene IDs: ENSG00000140987

Ensembl transcript IDs: ENST00000304926.7, ENST00000396846.8, ENST00000396852.9, ENST00000422427.6, ENST00000439568.2, ENST00000571906.1, ENST00000573719.1, ENST00000573830.1, ENST00000574084.1, ENST00000574940.5, ENST00000575350.2, ENST00000576500.5, ENST00000618425.4

Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTaGACCATCCACAGTGCCATCTTCTACCTCCGTGGGTTCCCCATT +
Preference number: 1 (lower is better)
Translates to: PDFLARIPEVLFIPV*TIHSAIFYLRGFPI
Trigger: AATGGGGAACCCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR CCA 90 bp AGTCTGTTTGGGAACAGCACTGGCAGGTCTAGTTTCCTGACTTCCTaGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTGCACCATCC +
Preference number: 1 (lower is better)
Translates to: SLFGNSTGRSSFLTS*PGFLKSFSSLSAPS
Trigger: GGATGGTGCAGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGCCAGTGCTGTTCCCAAACAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR TCA 90 bp CACAGCAGAAGAAAGCTCATACATGCTGACCTGAGGAACTTAATCTaGCAGTTTACCGACACACTCATAACGCATCTCTTCCTTCCTGTG +
Preference number: 1 (lower is better)
Translates to: HSRRKLIHADLRNLI*QFTDTLITHLFLPV
Trigger: CACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGTAAACTGTCAGATTAAGTTCCTCAGGTCAGCATGTATGAGCTTTCTTCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR CAA 90 bp CCCATTCTGGTGATTCAGCTCTCCAGCCTCAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCTTGCCATAGGAGGTGCAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PILVIQLSSLNITSF*ARNSIACHRRCRGP
Trigger: TGGGCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGGAGAGCTGAATCACCAGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp AAGCAAGGTGCTAAGTACCCAGCCAGCATAGGCTCAGGCTGTGAAAGGCAAGGCAAGATGGACCTGGTCTaGAGGCCTAACCAGCAGTCT +
Preference number: 2 (lower is better)
Translates to: KQGAKYPASIGSGCERQGKMDLV*RPNQQS
Trigger: AGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTT...GCCTTGCCTTTCACAGCCTGAGCCTATGCTGGCTGGGTACTTAGCACCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
3UTR-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 2 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
3UTR-3UTR GCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCATTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCAC +
Preference number: 2 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSFQFER*LVGRVH
Trigger: GTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAA...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR TCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 2 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR GCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCACTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp AGCAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: SSFSHRGYVYRLCPWHKNHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...GTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCCATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 2 (lower is better)
Translates to: QFFPQRICVQALSLAQKLHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR CAA 90 bp TCTCCTCACTCTCCCCTGGAGAATTTCTACATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGTGCCAATAAA +
Preference number: 2 (lower is better)
Translates to: SPHSPLENFYIAFLM*AHSPSLFVAQSANK
Trigger: TTTATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCCAGGGGAGAGTGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR GCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCTTAACTTTTACATGTaGTTTCCAGGAAAGGAGACA +
Preference number: 2 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLLNFYM*FPGKET
Trigger: TGTCTCCTTTCCTGGAAAGCACATGTAAAAGTTAAG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
3UTR-3UTR GCA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCGGAGAATTTCTACATTaGCTTCTTGATGTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: QFFPQRICVQALSLAQKLGEFLH*LLDVGS
Trigger: TGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR TCA 90 bp GAACTTAATCTGACAGTTTACCGACACACTCATAACGCATCTCTTCCTTCCTGTAAAGCTCATACATGCTaGCCTGAGGAACTTAATCTG +
Preference number: 2 (lower is better)
Translates to: ELNLTVYRHTHNASLPSCKAHTC*PEELNL
Trigger: CAGATTAAGTTCCTCAGGTCAGCATGTATGAGCTTT...ACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGTAAACTGTCAGATTAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp GAACTTAATCTGACAGTTTACCGACACACTCATAACGCATCTCTTCCTTCCTGTGCCAATAAACTCCTCTaGACTTTCTCTGTAAAGCCT +
Preference number: 2 (lower is better)
Translates to: ELNLTVYRHTHNASLPSCANKLL*TFSVKP
Trigger: AGGCTTTACAGAGAAAGTCCAGAGGAGTTTATTGGC...ACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGTAAACTGTCAGATTAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CCA 90 bp TTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTCTTGAAAACAAAAGGCAACCCTaGGCTTGGCCAGCTCAAACA +
Preference number: 2 (lower is better)
Translates to: LSTISSASLFIGVPSILENKRQP*AWPAQT
Trigger: TGTTTGAGCTGGCCAAGCCCAGGGTTGCCTTTTGTT...TTCAAGAATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574940.5
3UTR-3UTR CCA 90 bp CCTCAATTCTTGAATGTTCTAACTTCTAGCAGCAGAATAACAAAAGGCAACCCTATGAAAACCAAAACTTaGATAGGGTCACACATCAAG +
Preference number: 2 (lower is better)
Translates to: PQFLNVLTSSSRITKGNPMKTKT*IGSHIK
Trigger: CTTGATGTGTGACCCTATCCAAGTTTTGGTTTTCAT...AGGGTTGCCTTTTGTTATTCTGCTGCTAGAAGTTAGAACATTCAAGAATTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574940.5
3UTR CCA 72 bp TGTCTGCACCATCCACAGTGCCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGATTCAGCTCTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: CLHHPQCHLLPP*VPHSGDSALQP
Trigger: AGGCTGGAGAGCTGAATCACCAGAATGGGGAACCCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR CCA 72 bp GGGAACAGCACTGGCAGGTCTAGTTTCCTGACTTCCTaGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: GNSTGRSSFLTS*PGFLKSFSSLS
Trigger: AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGCCAGTGCTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CAA 90 bp AAGCAAGGTGCTAAGTACCCAGCCAGCATAGGCTCAGGCTGTGAAAGGCAAGGCCATGAAAACCAAAACTaGGATAGGGTCACACATCAA +
Preference number: 3 (lower is better)
Translates to: KQGAKYPASIGSGCERQGHENQN*DRVTHQ
Trigger: TTGATGTGTGACCCTATCCAAGTTTTGGTTTTCATG...GCCTTGCCTTTCACAGCCTGAGCCTATGCTGGCTGGGTACTTAGCACCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
3UTR CCA 72 bp TTCAGGACATTGAGATACTTTTTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCACACTCTGAGAGCAGTT +
Preference number: 3 (lower is better)
Translates to: FRTLRYFFQFER*LVGRVHTLRAV
Trigger: AACTGCTCTCAGAGTGTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTATCTCAATGTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
3UTR-3UTR CAA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCACAAAACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSQNQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTG...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp AAGCAAGGTGCTAAGTACCCAGCCAGCATAGGCTCAGGCTGTGAAAGGCAAGGCTGTCCTTCCTCTGGGTaGCACCCCTGTAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KQGAKYPASIGSGCERQGCPSSG*HPCRGP
Trigger: GGGCCCTCTACAGGGGTGCCACCCAGAGGAAGGACA...GCCTTGCCTTTCACAGCCTGAGCCTATGCTGGCTGGGTACTTAGCACCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCATTACGCACGCCCCTaGGCAGGCCCGCAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKHYARP*AGPQAE
Trigger: TTCGGCTTGCGGGCCTGCGCAGGGGCGTGCGTAATG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGGCCTCTCCCCTGTGTaGGTTCGTAGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRGLSPV*VRRWAV
Trigger: CACTGCCCACCTACGAACTCACACAGGGGAGAGGCC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGGCCTCTCCCCTGTGTaGGTTCGTAGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADGLSPV*VRRWAV
Trigger: CACTGCCCACCTACGAACTCACACAGGGGAGAGGCC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGGCCTCTCCCCTGTGTaGGTTCGTAGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKGLSPV*VRRWAV
Trigger: CACTGCCCACCTACGAACTCACACAGGGGAGAGGCC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACCAGGGCACACCTGTTaGGGACACCAGCACTCGCGA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRPGHTC*GHQHSR
Trigger: TCGCGAGTGCTGGTGTCCGCAACAGGTGTGCCCTGG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439568.2
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCGCATGGCTGGTCCCTaGGACCCAGCTGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLRMAGP*DPAVQT
Trigger: GGTCTGGACAGCTGGGTCCCAGGGACCAGCCATGCG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGGCCTCTCCCCTGTGTaGGTTCGTAGGTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIGLSPV*VRRWAV
Trigger: CACTGCCCACCTACGAACTCACACAGGGGAGAGGCC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGTGTGGATGCGCCGGTaGGCACTGAACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKVWMRR*ALNWEL
Trigger: CAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACAC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGTGTGGATGCGCCGGTaGGCACTGAACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADVWMRR*ALNWEL
Trigger: CAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACAC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGTAGAGGGCCCTTTGTaGAGGGCCTGGGCACATCCA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADVEGPL*RAWAHP
Trigger: TGGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTAC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGTAGAGGGCCCTTTGTaGAGGGCCTGGGCACATCCA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRVEGPL*RAWAHP
Trigger: TGGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTAC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR GCA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGCCAGGGCACACCTGTTaGGGACACCAGCACTCGCGA +
Preference number: 4 (lower is better)
Translates to: DDDDARISDSSYSTARLMPGHTC*GHQHSR
Trigger: TCGCGAGTGCTGGTGTCCGCAACAGGTGTGCCCTGG...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573830.1
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTGTCCTTCCTCTGGGTaGCACCCCTGTAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLCPSSG*HPCRGP
Trigger: GGGCCCTCTACAGGGGTGCCACCCAGAGGAAGGACA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGTTGTCACGCATGGCTaGTCCCTGGGACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKVVTHG*SLGPSC
Trigger: ACAGCTGGGTCCCAGGGACCAGCCATGCGTGACAAC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCTCTGTTGTCACGCATaGCTGGTCCCTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADLCCHA*LVPGTQ
Trigger: CTGGGTCCCAGGGACCAGCCATGCGTGACAACAGAG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAGGTTCCTGGGAGCCTaGGGAGCAAGCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIRFLGA*GASQAV
Trigger: AACAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304926.7
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATGGAGACCTGTGTTTTaGGGCAGGTTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRWRPVF*GRFLGA
Trigger: GGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGTGTGGATGCGCCGGTaGGCACTGAACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIVWMRR*ALNWEL
Trigger: CAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACAC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGTGTGGATGCGCCGGTaGGCACTGAACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLVWMRR*ALNWEL
Trigger: CAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACAC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAGGTTCCTGGGAGCCTaGGGAGCAAGCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIRFLGA*GASQAS
Trigger: AGAAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGAGGTTCCTGGGAGCCTaGGGAGCAAGCCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARRFLGA*GASQAS
Trigger: AGAAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCT...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACCGTTTTCTGGATGCTaGTCCCTCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRPFSGC*SLTQVW
Trigger: CCAGACCTGGGTGAGGGAGCAGCATCCAGAAAACGG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCGTAGAGGGCCCTTTGTaGAGGGCCTGGGCACATCCA +
Preference number: 4 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGVEGPL*RAWAHP
Trigger: TGGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTAC...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp TTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCGTAGAGGGCCCTTTGTaGAGGGCCTGGGCACATCCA +
Preference number: 4 (lower is better)
Translates to: LDRVTHQDDDDARISDSSVEGPL*RAWAHP
Trigger: TGGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTAC...GGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTCAGGGCTGTTACCCTaGAGGGCTGATTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKSGLLP*RADFWP
Trigger: GGGCCAGAAATCAGCCCTCCAGGGTAACAGCCCTGA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAGCACCACTCTAGCCTaGGACCCAGCTGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSTTLA*DPAVQT
Trigger: GGTCTGGACAGCTGGGTCCCAGGCTAGAGTGGTGCT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304926.7
CDS-3UTR CCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTTGTCCTTCCTCTGGGTaGCACCCCTGTAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTACPSSG*HPCRGP
Trigger: GGGCCCTCTACAGGGGTGCCACCCAGAGGAAGGACA...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
3UTR CAA 72 bp GTGATTCAGCTCTCCAGCCTCAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCTTGCCATAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VIQLSSLNITSF*ARNSIACHRRC
Trigger: GCACCTCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGGAGAGCTGAATCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTGTGGGATCCTTGTTTaGGGATGGGTGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKCGILV*GWVCLG
Trigger: ACCGAGGCACACCCATCCTCAAACAAGGATCCCACA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATGGAGACCTGTGTTTTaGGGCAGGTTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIWRPVF*GRFLGA
Trigger: GGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGTGTGGATGCGCCGGTaGGCACTGAACTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHVWMRR*ALNWEL
Trigger: CAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACAC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGCAAGCCAGGCTTCTaGCTGTTCCCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADSKPGF*LFPWSL
Trigger: CAAAGACCAGGGGAACAGTCAGAAGCCTGGCTTGCT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR GCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACCGTTTTCTGGATGCTaGTCCCTCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIPFSGC*SLTQVW
Trigger: CCAGACCTGGGTGAGGGAGCAGCATCCAGAAAACGG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAGGGCTGTTACCCTaGAGGGCTGATTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: DRVTHQDDDDARISDSSYSGLLP*RADFWP
Trigger: GGGCCAGAAATCAGCCCTCCAGGGTAACAGCCCTGA...GTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKFQFER*LVGRVH
Trigger: GTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRFQFER*LVGRVH
Trigger: GTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGGTTGTCACGCATGGCTaGTCCCTGGGACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SHIKMMMMPGSVTAPTQLVVTHG*SLGPSC
Trigger: ACAGCTGGGTCCCAGGGACCAGCCATGCGTGACAAC...CAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp GGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGACACTCTGTTGTCACGCATaGCTGGTCCCTGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GLTSSLTMHSETPWEKMTLCCHA*LVPGTQ
Trigger: CTGGGTCCCAGGGACCAGCCATGCGTGACAACAGAG...TGTCATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp TGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTTGTGGGATCCTTGTTTaGGGATGGGTGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: WIGSHIKMMMMPGSVTAPCGILV*GWVCLG
Trigger: ACCGAGGCACACCCATCCTCAAACAAGGATCCCACA...AGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATGTGGGATCCTTGTTTaGGGATGGGTGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLICGILV*GWVCLG
Trigger: ACCGAGGCACACCCATCCTCAAACAAGGATCCCACA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACAGGATTTCCTCTTTTaGGTGGGTCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRQDFLF*VGLRPQ
Trigger: CTGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCAGGATTTCCTCTTTTaGGTGGGTCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADQDFLF*VGLRPQ
Trigger: CTGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RVTHQDDDDARISDSSYSAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...TGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGGAGAGTGCACACTCTaGGAGCAGTTTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRGECTL*EQFFPQ
Trigger: CTGTGGGAAAAACTGCTCTCAGAGTGTGCACTCTCC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGGAGAGTGCACACTCTaGGAGCAGTTTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKGECTL*EQFFPQ
Trigger: CTGTGGGAAAAACTGCTCTCAGAGTGTGCACTCTCC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADSASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKSASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAGTCGGTTCCTCTGGCTaGACCTCCTGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: QDDDDARISDSSYSTARLVGSSG*TSCFHW
Trigger: CCAATGGAAACAGGAGGTTCAGCCAGAGGAACCGAC...TAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCAGCAAGCCAGGCTTCTaGCTGTTCCCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGSKPGF*LFPWSL
Trigger: CAAAGACCAGGGGAACAGTCAGAAGCCTGGCTTGCT...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR GCA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTCCGTTTTCTGGATGCTaGTCCCTCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTHQDDDDARISDSSYSTPFSGC*SLTQVW
Trigger: CCAGACCTGGGTGAGGGAGCAGCATCCAGAAAACGG...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AGAAGATGGACCTGGTCTGGAGGCCTAACCAGCAGTCTGACAATGCATAGTGAAGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: RRWTWSGGLTSSLTMHSEGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...TTCACTATGCATTGTCAGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp GATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DRVTHQDDDDARISDSSYRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...GTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DDDDARISDSSYSTARLMRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GGAGGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGCTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GGLTSSLTMHSETPWEKMLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...CATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp GATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGCCCTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: DDDARISDSSYSTARLMALFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...GGCCATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCCCAGGGCACACCTGTTaGTGTTGTCCAGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QFFPQRICVQALSLAQKLPGHTC*CCPGAL
Trigger: GAGAGCTCCTGGACAACAGCAACAGGTGTGCCCTGG...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCCAGGGCACACCTGTTaGTGTTGTCCAGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHPGHTC*CCPGAL
Trigger: GAGAGCTCCTGGACAACAGCAACAGGTGTGCCCTGG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADRTGLL*LPLLPW
Trigger: CCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTCAGGGCTGTTACCCTaGAGGGCTGATTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSGLLP*RADFWP
Trigger: GGGCCAGAAATCAGCCCTCCAGGGTAACAGCCCTGA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCCTTTGTGCAGGGCCTaGGCACATCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLPLCRA*AHPFLL
Trigger: CAGCAAGAATGGATGTGCCCAGGCCCTGCACAAAGG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CCA 90 bp GGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACCTTTGTGCAGGGCCTaGGCACATCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSHIKMMMMPGSVTAPTQPLCRA*AHPFLL
Trigger: CAGCAAGAATGGATGTGCCCAGGCCCTGCACAAAGG...TTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp TTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LDRVTHQDDDDARISDSSRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...GGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLFQFER*LVGRVH
Trigger: GTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGGCTTTTCACCAGTGTaGGTTTTTCGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRGFSPV*VFRWAL
Trigger: CAGTGCCCACCGAAAAACCCACACTGGTGAAAAGCC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGAAGATGGACCTGGTCTGGAGGCCTAACCAGCAGTCTGACAATGCATAGTGAATGTTCCCCTGGTCTTTaGTGTGAGCTCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: RRWTWSGGLTSSLTMHSECSPGL*CELCDP
Trigger: GGGATCACAGAGCTCACACCAAAGACCAGGGGAACA...TTCACTATGCATTGTCAGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp ATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTGGGAGAAGATGGACCTaGTCTGGAGGCCTAACCAGC +
Preference number: 4 (lower is better)
Translates to: IGSHIKMMMMPGSVTAPTGRRWT*SGGLTS
Trigger: GCTGGTTAGGCCTCCAGACCAGGTCCATCTTCTCCC...AGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTGTGGGATCCTTGTTTaGGGATGGGTGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHCGILV*GWVCLG
Trigger: ACCGAGGCACACCCATCCTCAAACAAGGATCCCACA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCTGTGGGATCCTTGTTTaGGGATGGGTGTGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: QFFPQRICVQALSLAQKLCGILV*GWVCLG
Trigger: ACCGAGGCACACCCATCCTCAAACAAGGATCCCACA...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACAGGATTTCCTCTTTTaGGTGGGTCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIQDFLF*VGLRPQ
Trigger: CTGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGAAGATGGACCTGGTCTGGAGGCCTAACCAGCAGTCTGACAATGCATAGTGAAATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RRWTWSGGLTSSLTMHSEIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...TTCACTATGCATTGTCAGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVTHQDDDDARISDSSYSRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...TGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSHIKMMMMPGSVTAPTQPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...TTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp ACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTGCAGGTCTAGTTTCCTaGCTTCCTGGCCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: TWIGSHIKMMMMPGSVTAAGLVS*LPGQDS
Trigger: GGAATCCTGGCCAGGAAGTCAGGAAACTAGACCTGC...AGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGGAGAGTGCACACTCTaGGAGCAGTTTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIGECTL*EQFFPQ
Trigger: CTGTGGGAAAAACTGCTCTCAGAGTGTGCACTCTCC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGGAGAGTGCACACTCTaGGAGCAGTTTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLGECTL*EQFFPQ
Trigger: CTGTGGGAAAAACTGCTCTCAGAGTGTGCACTCTCC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAATACTTTTTCCAGTTTaGGCGCTGGCTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRILFPV*ALACGE
Trigger: CTCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTAT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACATACTTTTTCCAGTTTaGGCGCTGGCTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADILFPV*ALACGE
Trigger: CTCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTAT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLISASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAAAGGGCTCAACTTTaGAGGATGTCGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRKRAQL*RMSDTS
Trigger: GCTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCATTGGGATCTCAGTaGTTCTCTGGTTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPLGSQ*FSGCSQ
Trigger: TTGGGAGCAACCAGAGAATCACTGAGATCCCAATGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGTCGGTTCCTCTGGCTaGACCTCCTGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHVGSSG*TSCFHW
Trigger: CCAATGGAAACAGGAGGTTCAGCCAGAGGAACCGAC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGGACTTTGCCATCCTTTaGCCATCAGAGCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARDFAIL*PSEPRE
Trigger: CTCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTC...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp GATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACGACTTTGCCATCCTTTaGCCATCAGAGCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DRVTHQDDDDARISDSSYDFAIL*PSEPRE
Trigger: CTCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTC...GTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: DDDDARISDSSYSTARLMGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp TGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: WIGSHIKMMMMPGSVTAPGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...AGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGACAAGGAACAGCATCGCTTaGCATAGGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLTSSLTMHSETPWEKMTRNSIA*HRRCRG
Trigger: GCCTCTGCACCTCCTATGGCAAGCGATGCTGTTCCT...TGTCATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTCTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VTHQDDDDARISDSSYSTLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADSFPHH*EAMFSC
Trigger: GCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLRTGLL*LPLLPW
Trigger: CCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTACGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: QDDDDARISDSSYSTARLRTGLL*LPLLPW
Trigger: CCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCG...TAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp GGGAGAAGATGGACCTGGTCTGGAGGCCTAACCAGCAGTCTGACAATGCATAGTTTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACT +
Preference number: 4 (lower is better)
Translates to: GRRWTWSGGLTSSLTMHSFASTN*LTLVAT
Trigger: AGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAA...ACTATGCATTGTCAGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp CCAGCCTCAATATCACTTCCTTCTTGGCCAGGAACAGCATCGCTTGCCATAGGAATTTCTGGCCCTGTGTaGGATCCTTGTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PASISLPSWPGTASLAIGISGPV*DPCLRM
Trigger: CATCCTCAAACAAGGATCCCACACAGGGCCAGAAAT...TCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAACAGCACCTGTCTCCTaGTCGTGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLITAPVS*SWRPVF
Trigger: AAACACAGGTCTCCACGACCAGGAGACAGGTGCTGT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGCACCTGTCTCCTaGTCGTGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLTAPVS*SWRPVF
Trigger: AAACACAGGTCTCCACGACCAGGAGACAGGTGCTGT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACTCTGTTGTCACGCATaGCTGGTCCCTGTAACAACA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRLCCHA*LVPVTT
Trigger: TGTTGTTACAGGGACCAGCCATGCGTGACAACAGAG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304926.7
CDS-3UTR CCA 90 bp ACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTTTGTGCAGGGCCTaGGCACATCCATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TWIGSHIKMMMMPGSVTAPLCRA*AHPFLL
Trigger: CAGCAAGAATGGATGTGCCCAGGCCCTGCACAAAGG...AGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp ACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TWIGSHIKMMMMPGSVTARVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...AGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CCAGCCTCAATATCACTTCCTTCTTGGCCAGGAACAGCATCGCTTGCCATAGGATACAGGCTTTGTCCCTaGCACAAAAACTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PASISLPSWPGTASLAIGYRLCP*HKNSGD
Trigger: GTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTA...TCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTTCCAGTTTGAGCGCTaGCTTGTGGGGAGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHFQFER*LVGRVH
Trigger: GTGCACTCTCCCCACAAGCCAGCGCTCAAACTGGAA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGGCTTTTCACCAGTGTaGGTTTTTCGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIGFSPV*VFRWAL
Trigger: CAGTGCCCACCGAAAAACCCACACTGGTGAAAAGCC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGGCTTTTCACCAGTGTaGGTTTTTCGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLGFSPV*VFRWAL
Trigger: CAGTGCCCACCGAAAAACCCACACTGGTGAAAAGCC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTGCAAAGTCAGGGACTaGCTAGATCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKCKVRD*LDLSTA
Trigger: TGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATGCAAAGTCAGGGACTaGCTAGATCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRCKVRD*LDLSTA
Trigger: TGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACATCTCAGTGATTCTCTaGTTGCTCCCAAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADISVIL*LLPKGP
Trigger: TGGCCCCTTTGGGAGCAACCAGAGAATCACTGAGAT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATGTTCCCCTGGTCTTTaGTGTGAGCTCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLICSPGL*CELCDP
Trigger: GGGATCACAGAGCTCACACCAAAGACCAGGGGAACA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR CCA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGTGTTCCCCTGGTCTTTaGTGTGAGCTCTGTGATCCC +
Preference number: 4 (lower is better)
Translates to: DDDDARISDSSYSTARLMCSPGL*CELCDP
Trigger: GGGATCACAGAGCTCACACCAAAGACCAGGGGAACA...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACGGGAGAAGATGGACCTaGTCTGGAGGCCTAACCAGC +
Preference number: 4 (lower is better)
Translates to: QNLDRVTHQDDDDARISDGRRWT*SGGLTS
Trigger: GCTGGTTAGGCCTCCAGACCAGGTCCATCTTCTCCC...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGTAATCCGTGGGACATaGGAGTGTCAGACATGTGTA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKVIRGT*ECQTCV
Trigger: TACACATGTCTGACACTCTCATGTCCCACGGATTAC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp ATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAGGATTTCCTCTTTTaGGTGGGTCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: IGSHIKMMMMPGSVTAPTQDFLF*VGLRPQ
Trigger: CTGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTG...AGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp GATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGCCTCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: DDDARISDSSYSTARLMASTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...GGCCATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTARGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp ATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: IGSHIKMMMMPGSVTAPTPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...AGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAATACTTTTTCCAGTTTaGGCGCTGGCTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIILFPV*ALACGE
Trigger: CTCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTAT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CCAGCCTCAATATCACTTCCTTCTTGGCCAGGAACAGCATCGCTTGCCATAGGAAGTGGGAGCTATTGTTaGAGATTTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: PASISLPSWPGTASLAIGSGSYC*RFSHTL
Trigger: CAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACT...TCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGCAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCAGCGTCCTTATGCTaGCTCCTGGTCCTAGACATG +
Preference number: 4 (lower is better)
Translates to: SSFSHRGYVYRLCPWHKNSASLC*LLVLDM
Trigger: CATGTCTAGGACCAGGAGTCAGCATAAGGACGCTGA...GTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCCATTGGGATCTCAGTaGTTCTCTGGTTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARPLGSQ*FSGCSQ
Trigger: TTGGGAGCAACCAGAGAATCACTGAGATCCCAATGG...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp GAACTTAATCTGACAGTTTACCGACACACTCATAACGCATCTCTTCCTTCCTGTCCGTTTTCTGGATGCTaGTCCCTCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ELNLTVYRHTHNASLPSCPFSGC*SLTQVW
Trigger: CCAGACCTGGGTGAGGGAGCAGCATCCAGAAAACGG...ACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGTAAACTGTCAGATTAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGGCCTCTCCTCACTTTaGGGTAACTCAACTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHGLSSL*GNSTVG
Trigger: GCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACCTGCACCATCCACAGTaGCATCTTCTACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QNLDRVTHQDDDDARISDLHHPQ*HLLPPW
Trigger: CCACGGAGGTAGAAGATGGCACTGTGGATGGTGCAG...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCACTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: RVTHQDDDDARISDSSYSLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...TGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCCTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR GCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTCTTTTCATCCCTGTCTaGACCATCCACAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSLFIPV*TIHSAI
Trigger: GATGGCACTGTGGATGGTGCAGACAGGGATGAAAAG...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHRTGLL*LPLLPW
Trigger: CCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTACTCTGTTGTCACGCATaGCTGGTCCCTGTAACAACA +
Preference number: 4 (lower is better)
Translates to: QDDDDARISDSSYSTARLLCCHA*LVPVTT
Trigger: TGTTGTTACAGGGACCAGCCATGCGTGACAACAGAG...TAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422427.6
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSHIKMMMMPGSVTAPTQHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...TTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAAAACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKKTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAAACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRKTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCCTCACTCTCCCCTaGAGAATTTCTACATTGCCT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLLTLP*RISTLP
Trigger: AGGCAATGTAGAAATTCTCCAGGGGAGAGTGAGGAG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATACAGGCTTTGTCCCTaGCACAAAAACTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRYRLCP*HKNSGD
Trigger: GTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTACAGGCTTTGTCCCTaGCACAAAAACTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADYRLCP*HKNSGD
Trigger: GTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCGGTGGGCACTGAAGTaGGAGCTATTGTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKRWALK*ELLLKI
Trigger: AATCTTCAACAATAGCTCCCACTTCAGTGCCCACCG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGCAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACGGCTTTTCACCAGTGTaGGTTTTTCGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSFSHRGYVYRLCPWHKNGFSPV*VFRWAL
Trigger: CAGTGCCCACCGAAAAACCCACACTGGTGAAAAGCC...GTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATGCAAAGTCAGGGACTaGCTAGATCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLICKVRD*LDLSTA
Trigger: TGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGATCTCAGTGATTCTCTaGTTGCTCCCAAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARISVIL*LLPKGP
Trigger: TGGCCCCTTTGGGAGCAACCAGAGAATCACTGAGAT...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAAAAGTCGGTTCCTCTaGCTGAACCTCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADKSRFL*LNLLFP
Trigger: TGGAAACAGGAGGTTCAGCCAGAGGAACCGACTTTT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR CCA 90 bp ATGGGAAAAGATGACATGAACTTAGTTGAAAGAGGTTGGCAAATGCAAAATCAGCGCATGGCTGGTCCCTaGGACCCAGCTGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: MGKDDMNLVERGWQMQNQRMAGP*DPAVQT
Trigger: GGTCTGGACAGCTGGGTCCCAGGGACCAGCCATGCG...CTGATTTTGCATTTGCCAACCTCTTTCAACTAAGTTCATGTCATCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp GGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTTACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSHIKMMMMPGSVTAPTQLTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAG...TTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAAGATGGACCTGGTCTaGAGGCCTAACCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTAKMDLV*RPNQQS
Trigger: AGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTT...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp GATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACAACAAAAGGCAACCCTaGGCTTGGCCAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: DRVTHQDDDDARISDSSYNKRQP*AWPAQT
Trigger: TGTTTGAGCTGGCCAAGCCCAGGGTTGCCTTTTGTT...GTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGTAATCCGTGGGACATaGGAGTGTCAGACATGTGTA +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLVIRGT*ECQTCV
Trigger: TACACATGTCTGACACTCTCATGTCCCACGGATTAC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLDRVTHQDDDDARISDSIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...GCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRSTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKSTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATATACTTTTTCCAGTTTaGGCGCTGGCTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHILFPV*ALACGE
Trigger: CTCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTAT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAGTGGGAGCTATTGTTaGAGATTTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRSGSYC*RFSHTL
Trigger: CAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGTGGGAGCTATTGTTaGAGATTTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADSGSYC*RFSHTL
Trigger: CAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTGAGGAACTTAATCTaGCAGTTTACCGACACACTC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLRNLI*QFTDTL
Trigger: GAGTGTGTCGGTAAACTGTCAGATTAAGTTCCTCAG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCTGAGGAACTTAATCTaGCAGTTTACCGACACACTC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADLRNLI*QFTDTL
Trigger: GAGTGTGTCGGTAAACTGTCAGATTAAGTTCCTCAG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAAAAGGGCTCAACTTTaGAGGATGTCGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHKRAQL*RMSDTS
Trigger: GCTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AGCAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACAAAAGGGCTCAACTTTaGAGGATGTCGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: SSFSHRGYVYRLCPWHKNKRAQL*RMSDTS
Trigger: GCTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTT...GTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGGGCCATCTCCTTCATaGGTACTTTCAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLGPSPS*VLSSPS
Trigger: AGAAGGACTTGAAAGTACTCATGAAGGAGATGGCCC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR TCA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGGGGCCATCTCCTTCATaGGTACTTTCAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HQDDDDARISDSSYSTARGPSPS*VLSSPS
Trigger: AGAAGGACTTGAAAGTACTCATGAAGGAGATGGCCC...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp GATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACGGGCCATCTCCTTCATaGGTACTTTCAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRVTHQDDDDARISDSSYGPSPS*VLSSPS
Trigger: AGAAGGACTTGAAAGTACTCATGAAGGAGATGGCCC...GTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTCCATTGGGATCTCAGTaGTTCTCTGGTTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTAPLGSQ*FSGCSQ
Trigger: TTGGGAGCAACCAGAGAATCACTGAGATCCCAATGG...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTCTTTCCACAGACAATaGACTGGTAAGGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKSFHRQ*TGKAFP
Trigger: GGGAAAAGCCTTACCAGTGCATTGTCTGTGGAAAGA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGATCTTTCCACAGACAATaGACTGGTAAGGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRSFHRQ*TGKAFP
Trigger: GGGAAAAGCCTTACCAGTGCATTGTCTGTGGAAAGA...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADSFCNP*DMRVSD
Trigger: GTCTGACACTCTCATGTCCCACGGATTACAGAAAGA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCTCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QFFPQRICVQALSLAQKLSFPHH*EAMFSC
Trigger: GCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGA...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSFPHH*EAMFSC
Trigger: GCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADLPLLP*RSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLPLLP*RSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACT +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADFASTN*LTLVAT
Trigger: AGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAATTTCTGGCCCTGTGTaGGATCCTTGTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIISGPV*DPCLRM
Trigger: CATCCTCAAACAAGGATCCCACACAGGGCCAGAAAT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGATTTCTGGCCCTGTGTaGGATCCTTGTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLISGPV*DPCLRM
Trigger: CATCCTCAAACAAGGATCCCACACAGGGCCAGAAAT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACACAGCACCTGTCTCCTaGTCGTGGAGACCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QNLDRVTHQDDDDARISDTAPVS*SWRPVF
Trigger: AAACACAGGTCTCCACGACCAGGAGACAGGTGCTGT...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp TTCTTGATGTTGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGTGCCAATAAAAGAGTCCTTCCGCCATaGCCCTGTAGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLMLAHSPSLFVAQSANKRVLPP*PCRSGC
Trigger: ACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCT...TTTATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp GGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGACACATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GLTSSLTMHSETPWEKMTHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...TGTCATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAAAACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLKTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAAAACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIKTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CCAGCCTCAATATCACTTCCTTCTTGGCCAGGAACAGCATCGCTTGCCATAGGAGCCAATAAACTCCTCTaGACTTTCTCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PASISLPSWPGTASLAIGANKLL*TFSVKP
Trigger: AGGCTTTACAGAGAAAGTCCAGAGGAGTTTATTGGC...TCCTATGGCAAGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTCCTCACTCTCCCCTaGAGAATTTCTACATTGCCT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILLTLP*RISTLP
Trigger: AGGCAATGTAGAAATTCTCCAGGGGAGAGTGAGGAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCACATCTTCTCCTGGGATaGGGTTTTCTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSHLLLG*GFLLTL
Trigger: GAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATG...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTACAGGCTTTGTCCCTaGCACAAAAACTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLYRLCP*HKNSGD
Trigger: GTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATACAGGCTTTGTCCCTaGCACAAAAACTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIYRLCP*HKNSGD
Trigger: GTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACGGTGGGCACTGAAGTaGGAGCTATTGTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIRWALK*ELLLKI
Trigger: AATCTTCAACAATAGCTCCCACTTCAGTGCCCACCG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTGCAAAGTCAGGGACTaGCTAGATCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHCKVRD*LDLSTA
Trigger: TGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTATCTCAGTGATTCTCTaGTTGCTCCCAAAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTHQDDDDARISDSSYSTISVIL*LLPKGP
Trigger: TGGCCCCTTTGGGAGCAACCAGAGAATCACTGAGAT...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACACCTCCTGTTTCCATTaGGATCTCAGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADTSCFH*DLSDSL
Trigger: CAGAGAATCACTGAGATCCCAATGGAAACAGGAGGT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396852.9
CDS-3UTR CCA 90 bp ACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCTTACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TWIGSHIKMMMMPGSVTALTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAG...AGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTCTTACCAAGTCTGTTTaGGAACAGCACTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTALTKSV*EQHWQV
Trigger: GACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAG...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAAGATGGACCTGGTCTaGAGGCCTAACCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QNLDRVTHQDDDDARISDKMDLV*RPNQQS
Trigger: AGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTT...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp GGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGACAGAAAAAGGGAGAAGATaGACCTGGTCTGGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GLTSSLTMHSETPWEKMTEKGRR*TWSGGL
Trigger: TAGGCCTCCAGACCAGGTCCATCTTCTCCCTTTTTC...TGTCATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGAAAAAGGGAGAAGATaGACCTGGTCTGGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: VTHQDDDDARISDSSYSTEKGRR*TWSGGL
Trigger: TAGGCCTCCAGACCAGGTCCATCTTCTCCCTTTTTC...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR TCA 90 bp CACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGTAATCCGTGGGACATaGGAGTGTCAGACATGTGTA +
Preference number: 4 (lower is better)
Translates to: HIKMMMMPGSVTAPTQLLVIRGT*ECQTCV
Trigger: TACACATGTCTGACACTCTCATGTCCCACGGATTAC...TAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAGTAATCCGTGGGACATaGGAGTGTCAGACATGTGTA +
Preference number: 4 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSVIRGT*ECQTCV
Trigger: TACACATGTCTGACACTCTCATGTCCCACGGATTAC...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp CCTCAATTCTTGAATGTTCTAACTTCTAGCAGCAGAATAACAAAAGGCAACCCTTGGAGACCTGTGTTTTaGGGCAGGTTCCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQFLNVLTSSSRITKGNPWRPVF*GRFLGA
Trigger: GGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCA...AGGGTTGCCTTTTGTTATTCTGCTGCTAGAAGTTAGAACATTCAAGAATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLISTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACACCTGGCCAGGATTCCTaGAGTCCTTTTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTWIGSHIKMMMMPGSVTPGQDS*SPFHPC
Trigger: ACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGG...TGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACACTGGGAACTGTTGTTaGATCTCTTTCCACAGACAA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADTGNCC*ISFHRQ
Trigger: TTGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAGTGGGAGCTATTGTTaGAGATTTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLISGSYC*RFSHTL
Trigger: CAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAGTGGGAGCTATTGTTaGAGATTTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSGSYC*RFSHTL
Trigger: CAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTGAGGAACTTAATCTaGCAGTTTACCGACACACTC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILRNLI*QFTDTL
Trigger: GAGTGTGTCGGTAAACTGTCAGATTAAGTTCCTCAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGAAGCCATGTTCTCCTaGAAGGAATGTCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRREAMFS*KECLSV
Trigger: TACAGAAAGACATTCCTTGCAGGAGAACATGGCTTC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGAAGCCATGTTCTCCTaGAAGGAATGTCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKEAMFS*KECLSV
Trigger: TACAGAAAGACATTCCTTGCAGGAGAACATGGCTTC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCTCGGTACTCTTCACTaGAGCCATCATTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLLGTLH*SHHLLQ
Trigger: TTGAAGCAAATGATGGCTGCAGTGAAGAGTACCGAG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTCTTTCCACAGACAATaGACTGGTAAGGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSFHRQ*TGKAFP
Trigger: GGGAAAAGCCTTACCAGTGCATTGTCTGTGGAAAGA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLISFCNP*DMRVSD
Trigger: GTCTGACACTCTCATGTCCCACGGATTACAGAAAGA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTTCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSSFCNP*DMRVSD
Trigger: GTCTGACACTCTCATGTCCCACGGATTACAGAAAGA...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLSFCNP*DMRVSD
Trigger: GTCTGACACTCTCATGTCCCACGGATTACAGAAAGA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILPLLP*RSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATATTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIFASTN*LTLVAT
Trigger: AGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAA...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATATTTCTGGCCCTGTGTaGGATCCTTGTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHISGPV*DPCLRM
Trigger: CATCCTCAAACAAGGATCCCACACAGGGCCAGAAAT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACCATCTTCTACCTCCGTaGGTTCCCCATTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QNLDRVTHQDDDDARISDHLLPP*VPHSGD
Trigger: ATCACCAGAATGGGGAACCCACGGAGGTAGAAGATG...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCTCCTCACTCTCCCCTaGAGAATTTCTACATTGCCT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHLLTLP*RISTLP
Trigger: AGGCAATGTAGAAATTCTCCAGGGGAGAGTGAGGAG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAACCTCCTGTTTCCATTaGGATCTCAGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: QDDDDARISDSSYSTARLTSCFH*DLSDSL
Trigger: CAGAGAATCACTGAGATCCCAATGGAAACAGGAGGT...TAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTAAAAGTCGGTTCCTCTaGCTGAACCTCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VTHQDDDDARISDSSYSTKSRFL*LNLLFP
Trigger: TGGAAACAGGAGGTTCAGCCAGAGGAACCGACTTTT...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp ATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTAAAAGTCGGTTCCTCTaGCTGAACCTCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IGSHIKMMMMPGSVTAPTKSRFL*LNLLFP
Trigger: TGGAAACAGGAGGTTCAGCCAGAGGAACCGACTTTT...AGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
3UTR CAA 72 bp CCTCACTCTCCCCTGGAGAATTTCTACATTGCCTTCTaGATGTTGGCTCACTCTCCAAGCCTTTTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PHSPLENFYIAF*MLAHSPSLFVA
Trigger: AGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCCAGGGGAGAGTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAAAAGGGCTCAACTTTaGAGGATGTCTGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIKRAQL*RMSEED
Trigger: ATCCTCTTCAGACATCCTTCAAAGTTGAGCCCTTTT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304926.7
CDS-3UTR TCA 90 bp AAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAATCTGGCTGTTCTGCTaGCAGGTCTGGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KTWIGSHIKMMMMPGSVTIWLFC*QVWSFP
Trigger: TGGAAAACTCCAGACCTGTCAGCAGAACAGCCAGAT...TGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTTCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTASTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTATCAACTGTAGGCTTTTaGACTTGGTGCGACACTGTT +
Preference number: 4 (lower is better)
Translates to: HIKMMMMPGSVTAPTQLLSTVGF*TWCDTV
Trigger: AACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGA...TAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR TCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCACATTCAGGACATTaGGATACTTTTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPHSGH*DTFSSL
Trigger: CAAACTGGAAAAAGTATCTCAATGTCCTGAATGTGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACCACATTCAGGACATTaGGATACTTTTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRPHSGH*DTFSSL
Trigger: CAAACTGGAAAAAGTATCTCAATGTCCTGAATGTGG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTGGGAACTGTTGTTaGATCTCTTTCCACAGACAA +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLTGNCC*ISFHRQ
Trigger: TTGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTACTGGGAACTGTTGTTaGATCTCTTTCCACAGACAA +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSTGNCC*ISFHRQ
Trigger: TTGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGT...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCTGAGGAACTTAATCTaGCAGTTTACCGACACACTC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHLRNLI*QFTDTL
Trigger: GAGTGTGTCGGTAAACTGTCAGATTAAGTTCCTCAG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAAAGCTCATACATGCTaGCCTGAGGAACTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIKAHTC*PEELNL
Trigger: CAGATTAAGTTCCTCAGGTCAGCATGTATGAGCTTT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAAAGCTCATACATGCTaGCCTGAGGAACTTAATCTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLKAHTC*PEELNL
Trigger: CAGATTAAGTTCCTCAGGTCAGCATGTATGAGCTTT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGGAGAATTTCTACATTaGCTTCTTGATGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SQGLARSLHSRRKLIHADGEFLH*LLDVGS
Trigger: TGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGGAGAATTTCTACATTaGCTTCTTGATGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKGEFLH*LLDVGS
Trigger: TGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGGAGAATTTCTACATTaGCTTCTTGATGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRGEFLH*LLDVGS
Trigger: TGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTCTTTCCACAGACAATaGACTGGTAAGGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSFHRQ*TGKAFP
Trigger: GGGAAAAGCCTTACCAGTGCATTGTCTGTGGAAAGA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp ACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTTCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: THQDDDDARISDSSYSTASFCNP*DMRVSD
Trigger: GTCTGACACTCTCATGTCCCACGGATTACAGAAAGA...AGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHLPLLP*RSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATTTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHFASTN*LTLVAT
Trigger: AGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAA...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGCCAATAAACTCCTCTaGACTTTCTCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIANKLL*TFSVKP
Trigger: AGGCTTTACAGAGAAAGTCCAGAGGAGTTTATTGGC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGCCAATAAACTCCTCTaGACTTTCTCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLANKLL*TFSVKP
Trigger: AGGCTTTACAGAGAAAGTCCAGAGGAGTTTATTGGC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
3UTR CAA 72 bp TCTCCCCTGGAGAATTTCTACATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SPLENFYIAFLM*AHSPSLFVAQS
Trigger: ACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCCAGGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp GTGTACCCTCAATTCTTGAATGTTCTAACTTCTAGCAGCAGAATAACAAAAGGCAGAGGCCCAGGAGCCTaGAAGAGCATTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: VYPQFLNVLTSSSRITKGRGPGA*KSIHFL
Trigger: GAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCT...GCCTTTTGTTATTCTGCTGCTAGAAGTTAGAACATTCAAGAATTGAGGGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCCACATTCAGGACATTaGGATACTTTTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLPHSGH*DTFSSL
Trigger: CAAACTGGAAAAAGTATCTCAATGTCCTGAATGTGG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACCACATTCAGGACATTaGGATACTTTTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIPHSGH*DTFSSL
Trigger: CAAACTGGAAAAAGTATCTCAATGTCCTGAATGTGG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAAAGCTCATACATGCTaGCCTGAGGAACTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHKAHTC*PEELNL
Trigger: CAGATTAAGTTCCTCAGGTCAGCATGTATGAGCTTT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR TCA 90 bp ATGGGAAAAGATGACATGAACTTAGTTGAAAGAGGTTGGCAAATGCAAAATCAGGTCGGTTCCTCTGGCTaGACCTCCTGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: MGKDDMNLVERGWQMQNQVGSSG*TSCFHW
Trigger: CCAATGGAAACAGGAGGTTCAGCCAGAGGAACCGAC...CTGATTTTGCATTTGCCAACCTCTTTCAACTAAGTTCATGTCATCTTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR GCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGAAGCCATGTTCTCCTaGAAGGAATGTCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHEAMFS*KECLSV
Trigger: TACAGAAAGACATTCCTTGCAGGAGAACATGGCTTC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp AACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCGAAGCCATGTTCTCCTaGAAGGAATGTCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NLDRVTHQDDDDARISDSEAMFS*KECLSV
Trigger: TACAGAAAGACATTCCTTGCAGGAGAACATGGCTTC...GCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR GCA 90 bp TCTAGTTTCCTGACTTCCTGGCCAGGATTCCTGAAGTCCTTTTCATCCCTGTCTGGAGAATTTCTACATTaGCTTCTTGATGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSFLTSWPGFLKSFSSLSGEFLH*LLDVGS
Trigger: TGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC...AGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAGGAAACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR GCA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTTAACTTTTACATGTaGTTTCCAGGAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKLNFYM*FPGKET
Trigger: TGTCTCCTTTCCTGGAAAGCACATGTAAAAGTTAAG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACTTAACTTTTACATGTaGTTTCCAGGAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRLNFYM*FPGKET
Trigger: TGTCTCCTTTCCTGGAAAGCACATGTAAAAGTTAAG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCCAATAAACTCCTCTaGACTTTCTCTGTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHANKLL*TFSVKP
Trigger: AGGCTTTACAGAGAAAGTCCAGAGGAGTTTATTGGC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CCA 90 bp TTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTCTTGAAAGGCAACCCTGGGCTTaGCCAGCTCAAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSTISSASLFIGVPSILERQPWA*PAQTGR
Trigger: TCTTCCTGTTTGAGCTGGCCAAGCCCAGGGTTGCCT...TTCAAGAATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR TCA 90 bp AGCAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACCCACATTCAGGACATTaGGATACTTTTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSFSHRGYVYRLCPWHKNPHSGH*DTFSSL
Trigger: CAAACTGGAAAAAGTATCTCAATGTCCTGAATGTGG...GTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR TCA 90 bp ATGGGAAAAGATGACATGAACTTAGTTGAAAGAGGTTGGCAAATGCAAAATCAGACCACTCTAGCCTTCTaGCTGTTCCCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: MGKDDMNLVERGWQMQNQTTLAF*LFPWSL
Trigger: CAAAGACCAGGGGAACAGTCAGAAGGCTAGAGTGGT...CTGATTTTGCATTTGCCAACCTCTTTCAACTAAGTTCATGTCATCTTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422427.6
CDS-3UTR TCA 90 bp AAGACATTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTGACTTTGCCATCCTTTaGCCATCAGAGCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTLSTISSASLFIGVPSIDFAIL*PSEPRE
Trigger: CTCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTC...AATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR GCA 90 bp TTCTTGATGTTGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGTGCCAATAAATCTTTCCACAGACAATaGACTGGTAAGGCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLMLAHSPSLFVAQSANKSFHRQ*TGKAFP
Trigger: GGGAAAAGCCTTACCAGTGCATTGTCTGTGGAAAGA...TTTATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR GCA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTTAACTTTTACATGTaGTTTCCAGGAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILNFYM*FPGKET
Trigger: TGTCTCCTTTCCTGGAAAGCACATGTAAAAGTTAAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR GCA 90 bp GGAGGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGAAGCACTATATCATCTaGCAGTCTGTTTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: GGLTSSLTMHSETPWEKMKHYII*QSVYRC
Trigger: ACACCTATAAACAGACTGGCAGATGATATAGTGCTT...CATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp AAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACATTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: KTWIGSHIKMMMMPGSVTLPLLP*RSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAA...TGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGATGAAAACCAAAACTTaGATAGGGTCACACATCAAG +
Preference number: 4 (lower is better)
Translates to: DDDDARISDSSYSTARLMMKTKT*IGSHIK
Trigger: CTTGATGTGTGACCCTATCCAAGTTTTGGTTTTCAT...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp CAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGAAAACCAAAACTTaGATAGGGTCACACATCAAG +
Preference number: 4 (lower is better)
Translates to: QDDDDARISDSSYSTARLMKTKT*IGSHIK
Trigger: CTTGATGTGTGACCCTATCCAAGTTTTGGTTTTCAT...TAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CCA 90 bp AAGACATTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTTCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTLSTISSASLFIGVPSISFPHH*EAMFSC
Trigger: GCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGA...AATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp TTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTCTTGAAATTTCTGGCCCTGTGTaGGATCCTTGTTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LSTISSASLFIGVPSILEISGPV*DPCLRM
Trigger: CATCCTCAAACAAGGATCCCACACAGGGCCAGAAAT...TTCAAGAATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CCA 90 bp AAGACATTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTACCTCCTGTTTCCATTaGGATCTCAGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KTLSTISSASLFIGVPSITSCFH*DLSDSL
Trigger: CAGAGAATCACTGAGATCCCAATGGAAACAGGAGGT...AATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS CCA 90 bp AGGGCACACCTGTTGCCAGCGAGACGTGACTGTCCTTCCTCTGGGTaGCACCCCTGTAGAGGGCCCTTTGTGCAGGGCCTGGGCACATCC +
Preference number: 5 (lower is better)
Translates to: RAHLLPARRDCPSSG*HPCRGPFVQGLGTS
Trigger: GGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGGGGTGCCACCCAGAGGAAGGACAGTCACGTCTCGCTGGCAACAGGTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000422427.6
ENST00000571906.1
ENST00000574940.5
ENST00000575350.2
CDS CCA 90 bp CGGGAGGCCTCGGAGTCAGGGCTGTTACCCTGGAGGGCTGATTTCTaGCCCTGTGTGGGATCCTTGTTTGAGGATGGGTGTGCCTCGGTA +
Preference number: 5 (lower is better)
Translates to: REASESGLLPWRADF*PCVGSLFEDGCASV
Trigger: TACCGAGGCACACCCATCCTCAAACAAGGATCCCACACAGGGCCAGAAATCAGCCCTCCAGGGTAACAGCCCTGACTCCGAGGCCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp CACCTGTCTCCTGGTCGTGGAGACCTGTGTTTTGAGGCAGGTTCCTaGGAGCCTGAGGAGCAAGCCAGGCTGTTGTCCAGGAGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: HLSPGRGDLCFEAGS*EPEEQARLLSRSSL
Trigger: CAGAGAGCTCCTGGACAACAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCACGACCAGGAGACAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000571906.1
CDS CCA 90 bp CACCTGTCTCCTGGTCGTGGAGACCTGTGTTTTGAGGCAGGTTCCTaGGAGCCTGAGGAGCAAGCCAGGCTTCTGACTGTTCCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HLSPGRGDLCFEAGS*EPEEQARLLTVPLV
Trigger: GACCAGGGGAACAGTCAGAAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCACGACCAGGAGACAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000574940.5
ENST00000575350.2
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCCAGGGCACACCTGTaGCGGACACCAGCACTCGCG +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPRAHL*RTPALA
Trigger: CGCGAGTGCTGGTGTCCGCAACAGGTGTGCCCTGGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439568.2
CDS-3UTR CAA 90 bp GGGAGAAGATGGACCTGGTCTGGAGGCCTAACCAGCAGTCTGACAATGCATAGTAGGGATACAGCTCTGTaGTCACGCATGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRRWTWSGGLTSSLTMHSRDTAL*SRMAGP
Trigger: GGGACCAGCCATGCGTGACAACAGAGCTGTATCCCT...ACTATGCATTGTCAGACTGCTGGTTAGGCCTCCAGACCAGGTCCATCTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCTGTAGAGGGCCCTTaGTGCAGGGCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPVEGP*CRAWAH
Trigger: ATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp GTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTCCCAGGGCACACCTGTaGCGGACACCAGCACTCGCG +
Preference number: 5 (lower is better)
Translates to: VTHQDDDDARISDSSYSTPRAHL*RTPALA
Trigger: CGCGAGTGCTGGTGTCCGCAACAGGTGTGCCCTGGG...AGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573830.1
CDS-3UTR CAA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCCCTGTAGAGGGCCCTTaGTGCAGGGCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGPVEGP*CRAWAH
Trigger: ATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGG...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGGTGGGCAGTGAGGTaGGAGCGCTCACTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADRWAVR*ERSLKP
Trigger: GGGCTTTAGTGAGCGCTCCAACCTCACTGCCCACCT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAGGTGGGCAGTGAGGTaGGAGCGCTCACTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRRWAVR*ERSLKP
Trigger: GGGCTTTAGTGAGCGCTCCAACCTCACTGCCCACCT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGTGTGGGATCCTTGTTaGAGGATGGGTGTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADVWDPC*RMGVPR
Trigger: CCGAGGCACACCCATCCTCAAACAAGGATCCCACAC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCCCTGTGTGGGATCCTaGTTTGAGGATGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADPCVGS*FEDGCA
Trigger: GGCACACCCATCCTCAAACAAGGATCCCACACAGGG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGAGCAAGCCAGGCTGTaGTCCAGGAGCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRREQARL*SRSSLY
Trigger: GTACAGAGAGCTCCTGGACAACAGCCTGGCTTGCTC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304926.7
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACGTGGAGACCTGTGTTTaGAGGCAGGTTCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADVETCV*RQVPGS
Trigger: GCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCAC...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAGGGATACAGCTCTGTaGTCACGCATGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADRDTAL*SRMAGP
Trigger: GGGACCAGCCATGCGTGACAACAGAGCTGTATCCCT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCCTGTAGAGGGCCCTTaGTGCAGGGCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHPVEGP*CRAWAH
Trigger: ATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp ATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCCTGTAGAGGGCCCTTaGTGCAGGGCCTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: IGSHIKMMMMPGSVTAPTPVEGP*CRAWAH
Trigger: ATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGG...AGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAGGTGGGCAGTGAGGTaGGAGCGCTCACTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIRWAVR*ERSLKP
Trigger: GGGCTTTAGTGAGCGCTCCAACCTCACTGCCCACCT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACCCTGTGTGGGATCCTaGTTTGAGGATGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIPCVGS*FEDGCA
Trigger: GGCACACCCATCCTCAAACAAGGATCCCACACAGGG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCCCTGTGTGGGATCCTaGTTTGAGGATGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLPCVGS*FEDGCA
Trigger: GGCACACCCATCCTCAAACAAGGATCCCACACAGGG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAGGGATACAGCTCTGTaGTCACGCATGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLRDTAL*SRMAGP
Trigger: GGGACCAGCCATGCGTGACAACAGAGCTGTATCCCT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAAGTTTGAGCGCTGGCTaGTGGGGAGAGTGCACACTC +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLISLSAG*WGECTL
Trigger: GAGTGTGCACTCTCCCCACAAGCCAGCGCTCAAACT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGCACACCTGTTGCTGTaGTCCAGGAGCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRAHLLL*SRSSLY
Trigger: GTACAGAGAGCTCCTGGACAACAGCAACAGGTGTGC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGGCACACCTGTTGCTGTaGTCCAGGAGCTCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKAHLLL*SRSSLY
Trigger: GTACAGAGAGCTCCTGGACAACAGCAACAGGTGTGC...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576500.5
ENST00000618425.4
CDS TCA 90 bp ATGATGGAGAGGTGGCTGGCAATAAGGGTAGTGGCTTGCCTGCCTTaGCAGTTGTGGGACTTCTTTGGAGAGATGGAAAGGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: MMERWLAIRVVACLP*QLWDFFGEMERFWN
Trigger: GTTCCAGAACCTTTCCATCTCTCCAAAGAAGTCCCACAACTGTCAAGGCAGGCAAGCCACTACCCTTATTGCCAGCCACCTCTCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396846.8
CDS GCA 90 bp TTTGAGGATGGGTGTGCCTCGGTACTCTTCACTGCAGCCATCATTTaGTTCAACGAACTGGCTTACTCTGGTTGCCACTTCTACCCTGGA +
Preference number: 5 (lower is better)
Translates to: FEDGCASVLFTAAII*FNELAYSGCHFYPG
Trigger: TCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAGAGTACCGAGGCACACCCATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp GTGCCTCGGTACTCTTCACTGCAGCCATCATTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACTTCTACCCTGGAGATCAGAGTCCAT +
Preference number: 5 (lower is better)
Translates to: VPRYSSLQPSFASTN*LTLVATSTLEIRVH
Trigger: ATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAGAGTACCGAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCCCCTGTGTGGGATCCTaGTTTGAGGATGGGTGTGCC +
Preference number: 5 (lower is better)
Translates to: NLDRVTHQDDDDARISDSPCVGS*FEDGCA
Trigger: GGCACACCCATCCTCAAACAAGGATCCCACACAGGG...GCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCCAGGATTTCCTCTTTaGAGTGGGTCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKPGFPL*SGSSAS
Trigger: TGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTGG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGTGGAGACCTGTGTTTaGAGGCAGGTTCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHVETCV*RQVPGS
Trigger: GCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCAC...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000396852.9
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAGTTTGAGCGCTGGCTaGTGGGGAGAGTGCACACTC +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHSLSAG*WGECTL
Trigger: GAGTGTGCACTCTCCCCACAAGCCAGCGCTCAAACT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CAGTTTTTCCCACAGAGGATATGTGTACAGGCTTTGTCCCTGGCACAAAAACTCAGTTTGAGCGCTGGCTaGTGGGGAGAGTGCACACTC +
Preference number: 5 (lower is better)
Translates to: QFFPQRICVQALSLAQKLSLSAG*WGECTL
Trigger: GAGTGTGCACTCTCCCCACAAGCCAGCGCTCAAACT...GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGAAAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp GATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGCCTCTTACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: DDDARISDSSYSTARLMASYQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAGA...GGCCATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS CCA 90 bp ACATCCATTCTTGCTGACAGAGGGATACAGCTCTGTTGTCACGCATaGCTGGTCCCTGTAACAACACTGGAGCTGCTGCTACCGATAAAA +
Preference number: 5 (lower is better)
Translates to: TSILADRGIQLCCHA*LVPVTTLELLLPIK
Trigger: TTTTATCGGTAGCAGCAGCTCCAGTGTTGTTACAGGGACCAGCCATGCGTGACAACAGAGCTGTATCCCTCTGTCAGCAAGAATGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304926.7
ENST00000422427.6
ENST00000575350.2
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCCAGGATTTCCTCTTTaGAGTGGGTCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLPGFPL*SGSSAS
Trigger: TGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTGG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp GATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGCCCTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: DDDARISDSSYSTARLMALNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...GGCCATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGACAAAACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRQNQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTG...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCAAAACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADQNQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAGATACTTTTTCCAGTTaGAGCGCTGGCTTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRDTFSS*SAGLWG
Trigger: TCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTATC...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCTAGCAGCAGAATAACAAAAGGCAACCCTGGGCTTGGCCAGCTCAAACAGGAATCTTACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSSRITKGNPGLGQLKQESYQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAGA...TTCCTGTTTGAGCTGGCCAAGCCCAGGGTTGCCTTTTGTTATTCTGCTGCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp ATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCGGACTTTGCCATCCTTaGACCATCAGAGCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: IKMMMMPGSVTAPTQLLGGLCHP*TIRAKG
Trigger: TCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTCC...GCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGGACTTTGCCATCCTTaGACCATCAGAGCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: DDDDARISDSSYSTARLMGLCHP*TIRAKG
Trigger: TCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTCC...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS TCA 90 bp CTTTGGTGTGAGCTCTGTGATCCCTTAAAAGTCGGTTCCTCTGGCTaGACCTCCTGTTTCCATTGGGATCTCAGTGATTCTCTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LWCELCDPLKVGSSG*TSCFHWDLSDSLVA
Trigger: AGCAACCAGAGAATCACTGAGATCCCAATGGAAACAGGAGGTTCAGCCAGAGGAACCGACTTTTAAGGGATCACAGAGCTCACACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396852.9
ENST00000422427.6
ENST00000573719.1
ENST00000574940.5
ENST00000575350.2
CDS TCA 90 bp ATCTCAGTGATTCTCTGGTTGCTCCCAAAGGGGCCATCTCCTTCATaGGTACTTTCAAGTCCTTCTCAGAATCTAGAACCGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: ISVILWLLPKGPSPS*VLSSPSQNLEPDTS
Trigger: GCTGGTGTCCGGTTCTAGATTCTGAGAAGGACTTGAAAGTACTCATGAAGGAGATGGCCCCTTTGGGAGCAACCAGAGAATCACTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422427.6
CDS GCA 90 bp TTCACTGCAGCCATCATTTGCTTCAACGAACTGGCTTACTCTGGTTaGCACTTCTACCCTGGAGATCAGAGTCCATCTTTCCCACATCAC +
Preference number: 5 (lower is better)
Translates to: FTAAIICFNELAYSG*HFYPGDQSPSFPHH
Trigger: GTGATGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp TGCCACTTCTACCCTGGAGATCAGAGTCCATCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGCAAGGAATGTCTTTCTGTAATCCGT +
Preference number: 5 (lower is better)
Translates to: CHFYPGDQSPSFPHH*EAMFSCKECLSVIR
Trigger: ACGGATTACAGAAAGACATTCCTTGCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp CATTTGCTTCAACGAACTGGCTTACTCTGGTTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTTCCCACATCACTGGGAAGCCATGTT +
Preference number: 5 (lower is better)
Translates to: HLLQRTGLLWLPLLP*RSESIFPTSLGSHV
Trigger: AACATGGCTTCCCAGTGATGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp ACTCTTCACTGCAGCCATCATTTGCTTCAACGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGGAGATCAGAGTCCATCTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: TLHCSHHLLQRTGLL*LPLLPWRSESIFPT
Trigger: TGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 90 bp AATAAGGGTAGTGGCTTGCCTGCCTTGACAGTTGTGGGACTTCTTTaGAGAGATGGAAAGGTTCTGGAACTTGACCTGTATTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: NKGSGLPALTVVGLL*RDGKVLELDLYSQH
Trigger: GTGCTGGGAATACAGGTCAAGTTCCAGAACCTTTCCATCTCTCCAAAGAAGTCCCACAACTGTCAAGGCAGGCAAGCCACTACCCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396846.8
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCACTGCAGCCATCATTaGCTTCAACGAACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKHCSHH*LQRTGL
Trigger: TAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTG...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCACTGCAGCCATCATTaGCTTCAACGAACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADHCSHH*LQRTGL
Trigger: TAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCCAGGATTTCCTCTTTaGAGTGGGTCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHPGFPL*SGSSAS
Trigger: TGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTGG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACCTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADLNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACAAAACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIQNQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCAAAACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLQNQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRIAFLM*AHSPSL
Trigger: AAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAAT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADIAFLM*AHSPSL
Trigger: AAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAAT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAGATACTTTTTCCAGTTaGAGCGCTGGCTTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIDTFSS*SAGLWG
Trigger: TCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTATC...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGGATACTTTTTCCAGTTaGAGCGCTGGCTTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLDTFSS*SAGLWG
Trigger: TCCCCACAAGCCAGCGCTCAAACTGGAAAAAGTATC...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTTCTTACCAAGTCTGTTaGGGAACAGCACTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WIGSHIKMMMMPGSVTAPSYQVC*GTALAG
Trigger: ACCTGCCAGTGCTGTTCCCAAACAGACTTGGTAAGA...AGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS TCA 90 bp TCAACTGCTAGGCTAATGGCCTCTAAAGTGGACTTTGCCATCCTTTaGCCATCAGAGCCAAGGGAGTCTTACCAAGTCTGTTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: STARLMASKVDFAIL*PSEPRESYQVCLGT
Trigger: TGTTCCCAAACAGACTTGGTAAGACTCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTCCACTTTAGAGGCCATTAGCCTAGCAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574084.1
ENST00000574940.5
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACACTGCAGCCATCATTaGCTTCAACGAACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIHCSHH*LQRTGL
Trigger: TAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLILNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTCTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: WIGSHIKMMMMPGSVTAPLNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...AGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGCTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLLNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp GGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAAAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: GSHIKMMMMPGSVTAPTQNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...TTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGTTCTACATTGCCTTCTaGATGTTGGCTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKFYIAF*MLAHSP
Trigger: TGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAA...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACTTCTACATTGCCTTCTaGATGTTGGCTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADFYIAF*MLAHSP
Trigger: TGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAA...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAATATGTGTACAGGCTTaGTCCCTGGCACAAAAACTC +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRICVQA*SLAQKL
Trigger: GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATAT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGAAAAAGGGCTCAACTTaGAAGGATGTCGGACACCAG +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLKKGST*KDVGHQ
Trigger: CTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTTT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CAAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACGGACTTTGCCATCCTTaGACCATCAGAGCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: QNLDRVTHQDDDDARISDGLCHP*TIRAKG
Trigger: TCCCTTGGCTCTGATGGTCAAAGGATGGCAAAGTCC...GTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCCTCTAAAGTGGACTTaGCCATCCTTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: HQDDDDARISDSSYSTARPLKWT*PSFDHQ
Trigger: CTGATGGTCAAAGGATGGCAAAGTCCACTTTAGAGG...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp GGCCTAACCAGCAGTCTGACAATGCATAGTGAAACTCCATGGGAAAAGATGACACACTGCAGCCATCATTaGCTTCAACGAACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: GLTSSLTMHSETPWEKMTHCSHH*LQRTGL
Trigger: TAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTG...TGTCATCTTTTCCCATGGAGTTTCACTATGCATTGTCAGACTGCTGGTTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp CCTCAATTCTTGAATGTTCTAACTTCTAGCAGCAGAATAACAAAAGGCAACCCTAGGGATACAGCTCTGTaGTCACGCATGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: PQFLNVLTSSSRITKGNPRDTAL*SRMAGP
Trigger: GGGACCAGCCATGCGTGACAACAGAGCTGTATCCCT...AGGGTTGCCTTTTGTTATTCTGCTGCTAGAAGTTAGAACATTCAAGAATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATCTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHLNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp ACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: TWIGSHIKMMMMPGSVTANITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...AGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHIAFLM*AHSPSL
Trigger: AAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAAT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAATTGCCTTCTTGATGTaGGCTCACTCTCCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSIAFLM*AHSPSL
Trigger: AAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAAT...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGTTCTACATTGCCTTCTaGATGTTGGCTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLFYIAF*MLAHSP
Trigger: TGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAA...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp CTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATAATATGTGTACAGGCTTaGTCCCTGGCACAAAAACTC +
Preference number: 5 (lower is better)
Translates to: LLQSQGLARSLHSRRKLIICVQA*SLAQKL
Trigger: GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATAT...TATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGATATGTGTACAGGCTTaGTCCCTGGCACAAAAACTC +
Preference number: 5 (lower is better)
Translates to: KVRDWLDLSTAEESSYMLICVQA*SLAQKL
Trigger: GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATAT...CAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp GTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGAACTGGGAACTGTTGTaGAATCTCTTTCCACAGACA +
Preference number: 5 (lower is better)
Translates to: VGLLQSQGLARSLHSRRKNWELL*NLFPQT
Trigger: TGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGTT...CTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATGCTGACAACTGGGAACTGTTGTaGAATCTCTTTCCACAGACA +
Preference number: 5 (lower is better)
Translates to: SQGLARSLHSRRKLIHADNWELL*NLFPQT
Trigger: TGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGTT...GTCAGCATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCAGTAGGTCTGTTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAACTGGGAACTGTTGTaGAATCTCTTTCCACAGACA +
Preference number: 5 (lower is better)
Translates to: SVGLLQSQGLARSLHSRRNWELL*NLFPQT
Trigger: TGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGTT...TCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAACAGACCTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp ACCGACACACTCATAACGCATCTCTTCCTTCCTGTGATGAGAGTACTGCTTTCAAAAAAGGGCTCAACTTaGAAGGATGTCGGACACCAG +
Preference number: 5 (lower is better)
Translates to: TDTLITHLFLPVMRVLLSKKGST*KDVGHQ
Trigger: CTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTTT...TGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGAGTGTGTCGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAAAAAGGGCTCAACTTaGAAGGATGTCGGACACCAG +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHKKGST*KDVGHQ
Trigger: CTGGTGTCCGACATCCTTCAAAGTTGAGCCCTTTTT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp TCACACATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCCTCTAAAGTGGACTTaGCCATCCTTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: SHIKMMMMPGSVTAPTQLPLKWT*PSFDHQ
Trigger: CTGATGGTCAAAGGATGGCAAAGTCCACTTTAGAGG...CAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp AAGACATTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTGTGGAGACCTGTGTTTaGAGGCAGGTTCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KTLSTISSASLFIGVPSIVETCV*RQVPGS
Trigger: GCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCAC...AATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp AAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACACTCAACTGTAGGCTTTaGAACTTGGTGCGACACTGT +
Preference number: 5 (lower is better)
Translates to: KTWIGSHIKMMMMPGSVTLNCRL*NLVRHC
Trigger: ACAGTGTCGCACCAAGTTCAAAAGCCTACAGTTGAG...TGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp TTGCAAAGTCAGGGACTGGCTAGATCTCTCCACAGCAGAAGAAAGCTCATACATAACTGGGAACTGTTGTaGAATCTCTTTCCACAGACA +
Preference number: 5 (lower is better)
Translates to: LQSQGLARSLHSRRKLIHNWELL*NLFPQT
Trigger: TGTCTGTGGAAAGAGATTCAACAACAGTTCCCAGTT...ATGTATGAGCTTTCTTCTGCTGTGGAGAGATCTAGCCAGTCCCTGACTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000439568.2
ENST00000576500.5
ENST00000618425.4
CDS-3UTR CAA 90 bp AAAACTTGGATAGGGTCACACATCAAGATGATGATGATGCCAGGATCAGTGACACCTCTAAAGTGGACTTaGCCATCCTTTGACCATCAG +
Preference number: 5 (lower is better)
Translates to: KTWIGSHIKMMMMPGSVTPLKWT*PSFDHQ
Trigger: CTGATGGTCAAAGGATGGCAAAGTCCACTTTAGAGG...TGTCACTGATCCTGGCATCATCATCATCTTGATGTGTGACCCTATCCAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422427.6
ENST00000573830.1
ENST00000574940.5
CDS-3UTR CAA 90 bp CATCAAGATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCATGAAAACCAAAACTaGGATAGGGTCACACATCAA +
Preference number: 5 (lower is better)
Translates to: HQDDDDARISDSSYSTARHENQN*DRVTHQ
Trigger: TTGATGTGTGACCCTATCCAAGTTTTGGTTTTCATG...CCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATCTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CAA 90 bp GATGATGATGATGCCAGGATCAGTGACAGCTCCTACTCAACTGCTAGGCTAATGGTGTACCCTCAATTCTaGAATGTTCTAACTTCTAGC +
Preference number: 5 (lower is better)
Translates to: DDDDARISDSSYSTARLMVYPQF*NVLTSS
Trigger: GCTAGAAGTTAGAACATTCAAGAATTGAGGGTACAC...CATTAGCCTAGCAGTTGAGTAGGAGCTGTCACTGATCCTGGCATCATCATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp TTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCAATTCTTGAACCAGGATTTCCTCTTTaGAGTGGGTCTTCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSTISSASLFIGVPSILEPGFPL*SGSSAS
Trigger: TGAGGCCGAAGACCCACTCAAAAGAGGAAATCCTGG...TTCAAGAATTGAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS-3UTR CAA 90 bp TTCTTGATGTTGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGTGCCAATAAATTCTACATTGCCTTCTaGATGTTGGCTCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: FLMLAHSPSLFVAQSANKFYIAF*MLAHSP
Trigger: TGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAA...TTTATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp TTCTTGATGTTGGCTCACTCTCCAAGCCTTTTTGTAGCTCAGAGTGCCAATAAAATATGTGTACAGGCTTaGTCCCTGGCACAAAAACTC +
Preference number: 5 (lower is better)
Translates to: FLMLAHSPSLFVAQSANKICVQA*SLAQKL
Trigger: GAGTTTTTGTGCCAGGGACAAAGCCTGTACACATAT...TTTATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000576500.5
CDS-3UTR CAA 90 bp ATGGGAAAAGATGACATGAACTTAGTTGAAAGAGGTTGGCAAATGCAAAATCAGAATATCACTTCCTTCTaGGCCAGGAACAGCATCGCT +
Preference number: 5 (lower is better)
Translates to: MGKDDMNLVERGWQMQNQNITSF*ARNSIA
Trigger: AGCGATGCTGTTCCTGGCCAAGAAGGAAGTGATATT...CTGATTTTGCATTTGCCAACCTCTTTCAACTAAGTTCATGTCATCTTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422427.6
ENST00000574940.5
CDS-3UTR CAA 90 bp AGGCAAGACATTAAGCACTATATCATCTGCCAGTCTGTTTATAGGTGTACCCTCCATGAAAACCAAAACTaGGATAGGGTCACACATCAA +
Preference number: 5 (lower is better)
Translates to: RQDIKHYIICQSVYRCTLHENQN*DRVTHQ
Trigger: TTGATGTGTGACCCTATCCAAGTTTTGGTTTTCATG...GAGGGTACACCTATAAACAGACTGGCAGATGATATAGTGCTTAATGTCTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574940.5
CDS GCA 72 bp CTTCCTCTGGGTGGCACCCCTGTAGAGGGCCCTTTGTaGAGGGCCTGGGCACATCCATTCTTGCTGACAGAG +
Preference number: 6 (lower is better)
Translates to: LPLGGTPVEGPL*RAWAHPFLLTE
Trigger: CTCTGTCAGCAAGAATGGATGTGCCCAGGCCCTGCACAAAGGGCCCTCTACAGGGGTGCCACCCAGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304926.7
ENST00000396852.9
ENST00000422427.6
ENST00000571906.1
ENST00000574940.5
ENST00000575350.2
CDS CCA 72 bp CCTGGTCGTGGAGACCTGTGTTTTGAGGCAGGTTCCTaGGAGCCTGAGGAGCAAGCCAGGCTGTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PGRGDLCFEAGS*EPEEQARLLSR
Trigger: CCTGGACAACAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCACGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304926.7
ENST00000571906.1
CDS CCA 72 bp CCTGGTCGTGGAGACCTGTGTTTTGAGGCAGGTTCCTaGGAGCCTGAGGAGCAAGCCAGGCTTCTGACTGTT +
Preference number: 6 (lower is better)
Translates to: PGRGDLCFEAGS*EPEEQARLLTV
Trigger: AACAGTCAGAAGCCTGGCTTGCTCCTCAGGCTCCCAGGAACCTGCCTCAAAACACAGGTCTCCACGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000574940.5
ENST00000575350.2
CDS CCA 72 bp TCGGAGTCAGGGCTGTTACCCTGGAGGGCTGATTTCTaGCCCTGTGTGGGATCCTTGTTTGAGGATGGGTGT +
Preference number: 6 (lower is better)
Translates to: SESGLLPWRADF*PCVGSLFEDGC
Trigger: ACACCCATCCTCAAACAAGGATCCCACACAGGGCCAGAAATCAGCCCTCCAGGGTAACAGCCCTGACTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 72 bp GGAGGGCTGATTTCTGGCCCTGTGTGGGATCCTTGTTaGAGGATGGGTGTGCCTCGGTACTCTTCACTGCAG +
Preference number: 6 (lower is better)
Translates to: GGLISGPVWDPC*RMGVPRYSSLQ
Trigger: CTGCAGTGAAGAGTACCGAGGCACACCCATCCTCAAACAAGGATCCCACACAGGGCCAGAAATCAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 72 bp CCCTGGAGGGCTGATTTCTGGCCCTGTGTGGGATCCTaGTTTGAGGATGGGTGTGCCTCGGTACTCTTCACT +
Preference number: 6 (lower is better)
Translates to: PWRADFWPCVGS*FEDGCASVLFT
Trigger: AGTGAAGAGTACCGAGGCACACCCATCCTCAAACAAGGATCCCACACAGGGCCAGAAATCAGCCCTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 72 bp GGAGCAAGCCAGGCTTCTGACTGTTCCCCTGGTCTTTaGTGTGAGCTCTGTGATCCCTTAAAAGTCGGTTCC +
Preference number: 6 (lower is better)
Translates to: GASQASDCSPGL*CELCDPLKVGS
Trigger: GGAACCGACTTTTAAGGGATCACAGAGCTCACACCAAAGACCAGGGGAACAGTCAGAAGCCTGGCTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396852.9
ENST00000574940.5
ENST00000575350.2
CDS CCA 72 bp GGCACACCTGTTGCTTCTGACTGTTCCCCTGGTCTTTaGTGTGAGCTCTGTGATCCCTTAAAAGTCGGTTCC +
Preference number: 6 (lower is better)
Translates to: GTPVASDCSPGL*CELCDPLKVGS
Trigger: GGAACCGACTTTTAAGGGATCACAGAGCTCACACCAAAGACCAGGGGAACAGTCAGAAGCAACAGGTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573719.1
CDS CCA 72 bp CAACGAACTGGCTTACTCTGGTTGCCACTTCTACCCTaGAGATCAGAGTCCATCTTTCCCACATCACTGGGA +
Preference number: 6 (lower is better)
Translates to: QRTGLLWLPLLP*RSESIFPTSLG
Trigger: TCCCAGTGATGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 72 bp TGGGTGTGCCTCGGTACTCTTCACTGCAGCCATCATTaGCTTCAACGAACTGGCTTACTCTGGTTGCCACTT +
Preference number: 6 (lower is better)
Translates to: WVCLGTLHCSHH*LQRTGLLWLPL
Trigger: AAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAGAGTACCGAGGCACACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 72 bp AATGATGGAGAGGTGGCTGGCAATAAGGGTAGTGGCTaGCCTGCCTTGACAGTTGTGGGACTTCTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: NDGEVAGNKGSG*PALTVVGLLWR
Trigger: TCTCCAAAGAAGTCCCACAACTGTCAAGGCAGGCAAGCCACTACCCTTATTGCCAGCCACCTCTCCATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396846.8
CDS CAA 90 bp AATGATGGAGAGGTGGCTGGCAATAAGGGTAGTGGCTTGCCTGCCTaGACAGTTGTGGGACTTCTTTGGAGAGATGGAAAGGTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: NDGEVAGNKGSGLPA*TVVGLLWRDGKVLE
Trigger: TTCCAGAACCTTTCCATCTCTCCAAAGAAGTCCCACAACTGTCAAGGCAGGCAAGCCACTACCCTTATTGCCAGCCACCTCTCCATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396846.8
CDS CAA 90 bp TCCACTGATAATGATGGAGAGGTGGCTGGCAATAAGGGTAGTGGCTaGCCTGCCTTGACAGTTGTGGGACTTCTTTGGAGAGATGGAAAG +
Preference number: 6 (lower is better)
Translates to: STDNDGEVAGNKGSG*PALTVVGLLWRDGK
Trigger: CTTTCCATCTCTCCAAAGAAGTCCCACAACTGTCAAGGCAGGCAAGCCACTACCCTTATTGCCAGCCACCTCTCCATCATTATCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396846.8
CDS CCA 72 bp TGCAGCCATCATTTGCTTCAACGAACTGGCTTACTCTaGTTGCCACTTCTACCCTGGAGATCAGAGTCCATC +
Preference number: 6 (lower is better)
Translates to: CSHHLLQRTGLL*LPLLPWRSESI
Trigger: GATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 90 bp CTTCACTGCAGCCATCATTTGCTTCAACGAACTGGCTTACTCTGGTaGCCACTTCTACCCTGGAGATCAGAGTCCATCTTTCCCACATCA +
Preference number: 6 (lower is better)
Translates to: LHCSHHLLQRTGLLW*PLLPWRSESIFPTS
Trigger: TGATGTGGGAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS TCA 72 bp TCCTGCAAGGAATGTCTTTCTGTAATCCGTGGGACATaGGAGTGTCAGACATGTGTAGAGACTCACAGCGGA +
Preference number: 6 (lower is better)
Translates to: SCKECLSVIRGT*ECQTCVETHSG
Trigger: TCCGCTGTGAGTCTCTACACATGTCTGACACTCTCATGTCCCACGGATTACAGAAAGACATTCCTTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS TCA 72 bp GAGCTCTGTGATCCCTTAAAAGTCGGTTCCTCTGGCTaGACCTCCTGTTTCCATTGGGATCTCAGTGATTCT +
Preference number: 6 (lower is better)
Translates to: ELCDPLKVGSSG*TSCFHWDLSDS
Trigger: AGAATCACTGAGATCCCAATGGAAACAGGAGGTTCAGCCAGAGGAACCGACTTTTAAGGGATCACAGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396852.9
ENST00000422427.6
ENST00000573719.1
ENST00000574940.5
ENST00000575350.2
CDS GCA 72 bp GCCATCATTTGCTTCAACGAACTGGCTTACTCTGGTTaGCACTTCTACCCTGGAGATCAGAGTCCATCTTTC +
Preference number: 6 (lower is better)
Translates to: AIICFNELAYSG*HFYPGDQSPSF
Trigger: GAAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 72 bp TACCCTGGAGATCAGAGTCCATCTTTCCCACATCACTaGGAAGCCATGTTCTCCTGCAAGGAATGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: YPGDQSPSFPHH*EAMFSCKECLS
Trigger: AGAAAGACATTCCTTGCAGGAGAACATGGCTTCCCAGTGATGTGGGAAAGATGGACTCTGATCTCCAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 72 bp TACTCTTCACTGCAGCCATCATTTGCTTCAACGAACTaGCTTACTCTGGTTGCCACTTCTACCCTGGAGATC +
Preference number: 6 (lower is better)
Translates to: YSSLQPSFASTN*LTLVATSTLEI
Trigger: GATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCTGCAGTGAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CAA 72 bp AGCCATCATTTGCTTCAACGAACTGGCTTACTCTGGTaGCCACTTCTACCCTGGAGATCAGAGTCCATCTTT +
Preference number: 6 (lower is better)
Translates to: SHHLLQRTGLLW*PLLPWRSESIF
Trigger: AAAGATGGACTCTGATCTCCAGGGTAGAAGTGGCAACCAGAGTAAGCCAGTTCGTTGAAGCAAATGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4
CDS CCA 72 bp CATGTTCTCCTGCAAGGAATGTCTTTCTGTAATCCGTaGGACATGAGAGTGTCAGACATGTGTAGAGACTCA +
Preference number: 6 (lower is better)
Translates to: HVLLQGMSFCNP*DMRVSDMCRDS
Trigger: TGAGTCTCTACACATGTCTGACACTCTCATGTCCCACGGATTACAGAAAGACATTCCTTGCAGGAGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000304926.7
ENST00000396846.8
ENST00000396852.9
ENST00000571906.1
ENST00000573719.1
ENST00000574940.5
ENST00000576500.5
ENST00000618425.4