RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN26 (Homo sapiens)

Ensembl gene IDs: ENSG00000197062

Ensembl transcript IDs: ENST00000316606.10, ENST00000421553.7, ENST00000611552.2, ENST00000614088.1, ENST00000617168.4, ENST00000619937.4, ENST00000623276.3

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAAAATATCAATCTTCCCTTGTTCTGCTTAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTCAT +
Preference number: 1 (lower is better)
Translates to: QKYQSSLVLLKPANL*ALDSLLTSKLLLSH
Trigger: ATGACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR CCA 90 bp CTGTTTAACTTTGATCCTAGCATATCATCTACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAGGAAAGCAAAGGAGAGAGAATAGAG +
Preference number: 1 (lower is better)
Translates to: LFNFDPSISSTVKLL*SKADFKESKGERIE
Trigger: CTCTATTCTCTCTCCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAATAATTTCACTGTAGATGATATGCTAGGATCAAAGTTAAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTGTGGGAGGAATGAGGTaGAGCCACTGGGGGAAAATG +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFVGGMR*SHWGKM
Trigger: CATTTTCCCCCAGTGGCTTCACCTCATTCCTCCCAC...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATTCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 2 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFKPANL*ALDSLL
Trigger: CAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTCAGCAGCCACTATACTaGCACTGGAGTTATCAAGTC +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFQQPLY*HWSYQV
Trigger: GACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTG...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCACCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTTTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 2 (lower is better)
Translates to: PANLWALDSLLTSKLLLSFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCACACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR GCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTAATTATCTTTGCTTTTaGAAATGCTTCCACTGGGGA +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFNYLCF*KCFHWG
Trigger: TCCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCATTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAAATCTTGACATAATGTaGTGGGGAATGGGGATGGGA +
Preference number: 2 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQANLDIM*WGMGMG
Trigger: TCCCATCCCCATTCCCCACCACATTATGTCAAGATT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTCACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: PANLWALDSLLTSKLLLSAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCACCTGAAGGCAAGTTCTaGAGTTCACCAGCGAAAATT +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSPEGKF*SSPAKI
Trigger: AATTTTCGCTGGTGAACTTCAGAACTTGCCTTCAGG...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR CAA 90 bp ATGCAGCAGCCACTATACTGGCACTGGAGTTATCAAGTCAGACAGTaGCTATTCAGATTAATTCAGCAAGGTTCATTCAAATTACTCATG +
Preference number: 2 (lower is better)
Translates to: MQQPLYWHWSYQVRQ*LFRLIQQGSFKLLM
Trigger: CATGAGTAATTTGAATGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCATCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAAATTATCTTTGCTTTTaGAAATGCTTCCACTGGGGA +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSNYLCF*KCFHWG
Trigger: TCCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR CAA 90 bp ATGCTGTTTAACTTTGATCCTAGCATATCATCTACAGTGAAATTATaGTGGTCCAAAGCTGACTTCAAGGAAAGCAAAGGAGAGAGAATA +
Preference number: 2 (lower is better)
Translates to: MLFNFDPSISSTVKL*WSKADFKESKGERI
Trigger: TATTCTCTCTCCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAATAATTTCACTGTAGATGATATGCTAGGATCAAAGTTAAACAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR TCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR GCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTA +
Preference number: 2 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSCSEE*CLTLIL
Trigger: TAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR CAA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATTTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR CAA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTTTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR TCA 72 bp AGACCAGGATATATATGGATTGCAGAGGCTGAGGGCTaGAGTTGTCACTCTGGTGATATGTTTTGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: RPGYIWIAEAEG*SCHSGDMFWSG
Trigger: TCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCTCAGCCTCTGCAATCCATATATATCCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CAA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR TCA 72 bp TTAAGCCTGCAAATCTGTGGGCACTTGATTCACTGCTaGCTTCAAAACTCTTACTCAGTCATGAAGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LSLQICGHLIHC*LQNSYSVMKLS
Trigger: AGAGAGCTTCATGACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR CAA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR-3UTR CAA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR-3UTR CAA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAAAATTATCTTTGCTTTaGAAAATGCTTCCACTGGGG +
Preference number: 3 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAKLSLL*KMLPLG
Trigger: CCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATTT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
3UTR GCA 72 bp TATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTAGCATATCATCTACAG +
Preference number: 3 (lower is better)
Translates to: YVTCSEMSCSEE*CLTLILAYHLQ
Trigger: CTGTAGATGATATGCTAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR GCA 72 bp TATAGCATATCCAAAAATATCAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGTGGGCACTTGATTCAC +
Preference number: 3 (lower is better)
Translates to: YSISKNINLPLF*LSLQICGHLIH
Trigger: GTGAATCAAGTGCCCACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATTTTTGGATATGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR TCA 72 bp TGCTGTTTAACTTTGATCCTAGCATATCATCTACAGTaGAATTATTGTGGTCCAAAGCTGACTTCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: CCLTLILAYHLQ*NYCGPKLTSRK
Trigger: TTTCCTTGAAGTCAGCTTTGGACCACAATAATTTCACTGTAGATGATATGCTAGGATCAAAGTTAAACAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTCTTCAGAGACACTCCTaGTCAAGGGGCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFLQRHS*SRGLRG
Trigger: TCCTCTGAGGCCCCTTGACCAGGAGTGTCTCTGAAG...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTCTTCAGAGACACTCCTaGTCAAGGGGCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSLQRHS*SRGLRG
Trigger: TCCTCTGAGGCCCCTTGACCAGGAGTGTCTCTGAAG...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR TCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDRTQTL*NSVLAH
Trigger: ATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR TCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATCACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCCTGCACCCGGGCCTaGAGCTCCTTAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSCTRA*SSLGRM
Trigger: CATCCTGCCTAAGGAGCTCCAGGCCCGGGTGCAGGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTTCCTGCACCCGGGCCTaGAGCTCCTTAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFSCTRA*SSLGRM
Trigger: CATCCTGCCTAAGGAGCTCCAGGCCCGGGTGCAGGA...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCCTTGTCTCCTCACCTaGTCAAGGGGCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTPCLLT*SRGLRG
Trigger: TCCTCTGAGGCCCCTTGACCAGGTGAGGAGACAAGG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611552.2
CDS-3UTR TCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSRTQTL*NSVLAH
Trigger: ATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTTCTTTGGGCTTGGCCTaGTGCCTTTCCAAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSSLGLA*CLSKLE
Trigger: CTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGA...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCGTGGGAGGAATGAGGTaGAGCCACTGGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTVGGMR*SHWGKM
Trigger: CATTTTCCCCCAGTGGCTTCACCTCATTCCTCCCAC...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGGCCAGTGGGAGGAATaGGGTGAAGCCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKGQWEE*GEATGG
Trigger: TCCCCCAGTGGCTTCACCTCATTCCTCCCACTGGCC...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTGGCCAGTGGGAGGAATaGGGTGAAGCCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTGQWEE*GEATGG
Trigger: TCCCCCAGTGGCTTCACCTCATTCCTCCCACTGGCC...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCGCAGAGGCTGAGGGCTaGAGTTGTCACTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTAEAEG*SCHSGD
Trigger: ATCACCAGAGTGACAACTTCAGCCCTCAGCCTCTGC...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTACTCACCAATGCTGTTaGCATCCCCAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSTHQCC*HPQLQT
Trigger: AGTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATTTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATCAGCAGCCACTATACTaGCACTGGAGTTATCAAGTC +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDQQPLY*HWSYQV
Trigger: GACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTG...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTGPSAG*ISAHVL
Trigger: CAGAACGTGAGCAGAGATTCATCCAGCACTTGGACC...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTATGTTGAAAAAGACCTaGCCTTTGCCTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFMLKKT*PLPEGF
Trigger: GAAGCCTTCAGGCAAAGGTCAGGTCTTTTTCAACAT...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATATTGTGGTCCAAAGCTaGCTTCAAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDIVVQS*LQGKQR
Trigger: CCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAAT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTCTGGTCTGGGTCCAATaGTGTTGCCATCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSLVWVQ*CCHPQL
Trigger: AAGCTGGGGATGGCAACAGCATTGGACCCAGACCAG...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316606.10
ENST00000614088.1
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTTTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTAGACCAGGATATATATaGATTGCAGAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSRPGYI*IAEAEG
Trigger: GCCCTCAGCCTCTGCAATCCATATATATCCTGGTCT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTAGGGGAGCCAGGGAATaGGCACTCACCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSRGARE*ALTNAV
Trigger: AACAGCATTGGTGAGTGCCCATTCCCTGGCTCCCCT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTTCTTTGGGCTTGGCCTaGTGCCTTTCCAAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFSLGLA*CLSKLE
Trigger: CTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGA...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEGPSAG*ISAHVL
Trigger: CAGAACGTGAGCAGAGATTCATCCAGCACTTGGACC...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTGTAAGACTGGAACTCTaGCACACATCAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFVRLEL*HTSDSQ
Trigger: CTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTAC...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCGTAAGACTGGAACTCTaGCACACATCAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTVRLEL*HTSDSQ
Trigger: CTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTAC...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTCACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCCCCCAAGAATTTTCTaGTGCCACAGTGGGCTACGG +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVPPRIF*CHSGLR
Trigger: CCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGG...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAGTGGGAGGAATGAGGTaGAGCCACTGGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTVGGMR*SHWGKM
Trigger: CATTTTCCCCCAGTGGCTTCACCTCATTCCTCCCAC...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTAAGTTGTCACTCTGGTaGTATGTTTTGGAGTGGACG +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSKLSLW*YVLEWT
Trigger: CGTCCACTCCAAAACATATCACCAGAGTGACAACTT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAGCAGAGGCTGAGGGCTaGAGTTGTCACTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERAEAEG*SCHSGD
Trigger: ATCACCAGAGTGACAACTTCAGCCCTCAGCCTCTGC...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGACTGGTCTGGGTCCAATaGTGTTGCCATCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERLVWVQ*CCHPQL
Trigger: AAGCTGGGGATGGCAACAGCATTGGACCCAGACCAG...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316606.10
ENST00000614088.1
CDS-3UTR GCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTACTCACCAATGCTGTTaGCATCCCCAGCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFTHQCC*HPQLQT
Trigger: AGTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGT...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR CCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGAGGACCTTGGCTCGATaGTGCTGCCGCTTAGGCATC +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKRTLAR*CCRLGI
Trigger: GATGCCTAAGCGGCAGCACCATCGAGCCAAGGTCCT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS-3UTR CCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGACTTCAGAGACACTCCTaGTCAAGGGGCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERLQRHS*SRGLRG
Trigger: TCCTCTGAGGCCCCTTGACCAGGAGTGTCTCTGAAG...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTAATCTTGACATAATGTaGTGGGGAATGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSNLDIM*WGMGMG
Trigger: TCCCATCCCCATTCCCCACCACATTATGTCAAGATT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTCCACTATACTGGCACTaGAGTTATCAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSPLYWH*SYQVRQ
Trigger: CTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGG...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAAGGGGAGCCAGGGAATaGGCACTCACCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERRGARE*ALTNAV
Trigger: AACAGCATTGGTGAGTGCCCATTCCCTGGCTCCCCT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGERTQTL*NSVLAH
Trigger: ATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTTAGAGCCCTCATTATaGGCCTCCATGGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTLEPSL*ASMGSD
Trigger: ATCTGAACCCATGGAGGCTCATAATGAGGGCTCTAA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCTCTGCTCACGTTCTaGGCATTTATACTCAATCTT +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFSLLTF*AFILNL
Trigger: AAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTGPSAG*ISAHVL
Trigger: CAGAACGTGAGCAGAGATTCATCCAGCACTTGGACC...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENGPSAG*ISAHVL
Trigger: CAGAACGTGAGCAGAGATTCATCCAGCACTTGGACC...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTACTCTTACTCAGTCATaGAGCTCTCTATTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFTLTQS*SSLLLR
Trigger: TCTAAGCAATAGAGAGCTTCATGACTGAGTAAGAGT...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTGTGGGAGGAATGAGGTaGAGCCACTGGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVVGGMR*SHWGKM
Trigger: CATTTTCCCCCAGTGGCTTCACCTCATTCCTCCCAC...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGGCCAGTGGGAGGAATaGGGTGAAGCCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPGQWEE*GEATGG
Trigger: TCCCCCAGTGGCTTCACCTCATTCCTCCCACTGGCC...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAGCAGAGGCTGAGGGCTaGAGTTGTCACTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAAEAEG*SCHSGD
Trigger: ATCACCAGAGTGACAACTTCAGCCCTCAGCCTCTGC...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTATGTTCCAAAAGGCCTaGATTCTGGCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFMFQKA*ILAKDF
Trigger: AAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACAT...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTATGGGCACTCACCAATaGTGTTGCCATCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVMGTHQ*CCHPQL
Trigger: AAGCTGGGGATGGCAACAGCATTGGTGAGTGCCCAT...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTCATTATGAGCCTCCATaGGTTCAGATATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSHYEPP*VQIFSQ
Trigger: CTGGGAAAATATCTGAACCCATGGAGGCTCATAATG...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDSRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCAGCAGCCACTATACTaGCACTGGAGTTATCAAGTC +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTQQPLY*HWSYQV
Trigger: GACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTCTTCTCGAGGTCCTGTaGTCTCTTCATAACGCAACT +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFLLEVL*SLHNAT
Trigger: AGTTGCGTTATGAAGAGACCACAGGACCTCGAGAAG...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTTTTCTTTGGCTGGTCTaGGTCCACCTGTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSFLWLV*VHLLSC
Trigger: ACAGGACAACAGGTGGACCCAGACCAGCCAAAGAAA...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR CCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGTTTCTTTGGCTGGTCTaGGTCCACCTGTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEFLWLV*VHLLSC
Trigger: ACAGGACAACAGGTGGACCCAGACCAGCCAAAGAAA...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR TCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVRTQTL*NSVLAH
Trigger: ATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCT...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCTTTGGGCTTGGCCTaGTGCCTTTCCAAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSLGLA*CLSKLE
Trigger: CTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATGTCTGACGAGGTGTaGACTCCTCTGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEMSDEV*TPLKGF
Trigger: AAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACAT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTATGTCTGACGAGGTGTaGACTCCTCTGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSMSDEV*TPLKGF
Trigger: AAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACAT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGACACAGTGGGCTACGGTaGCTTTTCCTAAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERHSGLR*LFLKCC
Trigger: ACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTG...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTATCTCCTCTCCAAGCTaGCTTTATTGTTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSISSPS*LYCLTS
Trigger: GGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAGAT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCACTCATGCCGAACCTaGTGTTCCTGTACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVHSCRT*CSCTPF
Trigger: GAAAGGAGTACAGGAACAGCAGGTTCGGCATGAGTG...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTATGTTCCAAAAGGCCTaGATTCTGGCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSMFQKA*ILAKDF
Trigger: AAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACAT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATTCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDSCSEE*CLTLIL
Trigger: TAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGA...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTATGGGCACTCACCAATaGTGTTGCCATCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTMGTHQ*CCHPQL
Trigger: AAGCTGGGGATGGCAACAGCATTGGTGAGTGCCCAT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGTCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGESSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTGAATTGTTTGCACAATaGCTCCTGTCCAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFELFAQ*LLSKAF
Trigger: AAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTC...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR TCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGTAAGACTGGAACTCTaGCACACATCAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKVRLEL*HTSDSQ
Trigger: CTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTAC...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAGTAAGACTGGAACTCTaGCACACATCAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAVRLEL*HTSDSQ
Trigger: CTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTAC...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAATGTCTGACGAGGTGTaGACTCCTCTGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERMSDEV*TPLKGF
Trigger: AAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACAT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAATGTCTGACGAGGTGTaGACTCCTCTGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTMSDEV*TPLKGF
Trigger: AAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACAT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTATTGTGGTCCAAAGCTaGCTTCAAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSIVVQS*LQGKQR
Trigger: CCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAAT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATTGTGGTCCAAAGCTaGCTTCAAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEIVVQS*LQGKQR
Trigger: CCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAAT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGCATAACGCAACTGCCTaGATTGTTTGCACAATGGCT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEHNATA*IVCTMA
Trigger: AGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATG...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCACCTTGGCTCGATGGTaGTGCCGCTTAGGCATCGCA +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLTLARW*CRLGIA
Trigger: TGCGATGCCTAAGCGGCAGCACCATCGAGCCAAGGT...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS-3UTR GCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVVTSHS*RTCCSC
Trigger: ACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTAC...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFVTSHS*RTCCSC
Trigger: ACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTAC...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTCWMNL*SRSEHL
Trigger: TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCATTATGAGCCTCCATaGGTTCAGATATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTHYEPP*VQIFSQ
Trigger: CTGGGAAAATATCTGAACCCATGGAGGCTCATAATG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTTACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENKPANL*ALDSLL
Trigger: CAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTT...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGCCACTATACTGGCACTaGAGTTATCAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEPLYWH*SYQVRQ
Trigger: CTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGG...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAGACCAGGATATATATaGATTGCAGAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENRPGYI*IAEAEG
Trigger: GCCCTCAGCCTCTGCAATCCATATATATCCTGGTCT...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTGGAAACAGTATTCTATaGACTCCCAAGACCAGGATA +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFGNSIL*TPKTRI
Trigger: TATCCTGGTCTTGGGAGTCCATAGAATACTGTTTCC...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTCTTCTCGAGGTCCTGTaGTCTCTTCATAACGCAACT +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFLLEVL*SLHNAT
Trigger: AGTTGCGTTATGAAGAGACCACAGGACCTCGAGAAG...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTTTCTTTGGCTGGTCTaGGTCCTGTTGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENFLWLV*VLLSCF
Trigger: GAAACAGGACAACAGGACCCAGACCAGCCAAAGAAA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623276.3
CDS-3UTR TCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCATCTTTGGGCTTGGCCTaGTGCCTTTCCAAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSSLGLA*CLSKLE
Trigger: CTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGA...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTATGTCTGACGAGGTGTaGACTCCTCTGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVMSDEV*TPLKGF
Trigger: AAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACAT...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAATGTTGAAAAAGACCTaGCCTTTGCCTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTMLKKT*PLPEGF
Trigger: GAAGCCTTCAGGCAAAGGTCAGGTCTTTTTCAACAT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGTCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGESMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTATTGTGGTCCAAAGCTaGCTTCAAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVIVVQS*LQGKQR
Trigger: CCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAAT...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTATTGTGGTCCAAAGCTaGCTTCAAGGAAAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFIVVQS*LQGKQR
Trigger: CCTTTGCTTTCCTTGAAGTCAGCTTTGGACCACAAT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCACTCTTACTCAGTCATaGAGCTCTCTATTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTTLTQS*SSLLLR
Trigger: TCTAAGCAATAGAGAGCTTCATGACTGAGTAAGAGT...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCACTTGATTCACTGCTaGCTTCAAAACTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTHLIHC*LQNSYS
Trigger: TGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGTGGGAGGAATGAGGTaGAGCCACTGGGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPVGGMR*SHWGKM
Trigger: CATTTTCCCCCAGTGGCTTCACCTCATTCCTCCCAC...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACCCTGAAGGCAAGTTCTaGAGTTCACCAGCGAAAATT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENPEGKF*SSPAKI
Trigger: AATTTTCGCTGGTGAACTTCAGAACTTGCCTTCAGG...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCCTGAAGGCAAGTTCTaGAGTTCACCAGCGAAAATT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVPEGKF*SSPAKI
Trigger: AATTTTCGCTGGTGAACTTCAGAACTTGCCTTCAGG...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAAAGTTGTCACTCTGGTaGTATGTTTTGGAGTGGACG +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERKLSLW*YVLEWT
Trigger: CGTCCACTCCAAAACATATCACCAGAGTGACAACTT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACCATAACGCAACTGCCTaGATTGTTTGCACAATGGCT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENHNATA*IVCTMA
Trigger: AGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATG...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTTTGGCTCGATGGTGCTaGCGCTTAGGCATCGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPLARWC*RLGIAE
Trigger: TTCTGCGATGCCTAAGCGGCAGCACCATCGAGCCAA...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS-3UTR GCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTVTSHS*RTCCSC
Trigger: ACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTAC...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGECWMNL*SRSEHL
Trigger: TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCA...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTTCTCCAAGATCCAGCTaGAAATCCTCCAGAACAACA +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFSPRSS*KSSRTT
Trigger: TGTTGTTCTGGAGGATTTGCAGCTGGATCTTGGAGA...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTCATTATGAGCCTCCATaGGTTCAGATATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSHYEPP*VQIFSQ
Trigger: CTGGGAAAATATCTGAACCCATGGAGGCTCATAATG...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVSSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCATCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQASSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGTCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKSSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACTCAATCTTCTCTTTaGGCTTGGCCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENTQSSL*AWPDAF
Trigger: AAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGT...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTACTCAATCTTCTCTTTaGGCTTGGCCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVTQSSL*AWPDAF
Trigger: AAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGT...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCATTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTTTTCTGATGCCACAGTaGGCTACGGTGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTFLMPQ*ATVTFP
Trigger: AGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAA...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKKPANL*ALDSLL
Trigger: CAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTKPANL*ALDSLL
Trigger: CAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAAAGCCTGCAAATCTGTaGGCACTTGATTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAKPANL*ALDSLL
Trigger: CAGCAGTGAATCAAGTGCCCACAGATTTGCAGGCTT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAAATCTTGACATAATGTaGTGGGGAATGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTNLDIM*WGMGMG
Trigger: TCCCATCCCCATTCCCCACCACATTATGTCAAGATT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACCCACTATACTGGCACTaGAGTTATCAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENPLYWH*SYQVRQ
Trigger: CTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGG...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTCCACTATACTGGCACTaGAGTTATCAAGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFPLYWH*SYQVRQ
Trigger: CTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGG...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGCAGCAGCCACTATACTaGCACTGGAGTTATCAAGTC +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKQQPLY*HWSYQV
Trigger: GACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTG...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTCAGCAGCCACTATACTaGCACTGGAGTTATCAAGTC +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTQQPLY*HWSYQV
Trigger: GACTTGATAACTCCAGTGCCAGTATAGTGGCTGCTG...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAAGACCAGGATATATATaGATTGCAGAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQARPGYI*IAEAEG
Trigger: GCCCTCAGCCTCTGCAATCCATATATATCCTGGTCT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGGGAAACAGTATTCTATaGACTCCCAAGACCAGGATA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEGNSIL*TPKTRI
Trigger: TATCCTGGTCTTGGGAGTCCATAGAATACTGTTTCC...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTGGAAACAGTATTCTATaGACTCCCAAGACCAGGATA +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSGNSIL*TPKTRI
Trigger: TATCCTGGTCTTGGGAGTCCATAGAATACTGTTTCC...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAAGGGGAGCCAGGGAATaGGCACTCACCAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRRGARE*ALTNAV
Trigger: AACAGCATTGGTGAGTGCCCATTCCCTGGCTCCCCT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTGAATTGTTTGCACAATaGCTCCTGTCCAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFELFAQ*LLSKAF
Trigger: AAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTC...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACGAATTGTTTGCACAATaGCTCCTGTCCAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENELFAQ*LLSKAF
Trigger: AAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTC...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACATTTTGTTTCTTTGGCTaGTCTGGGTCCACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTFCFFG*SGSTCC
Trigger: ACAACAGGTGGACCCAGACCAGCCAAAGAAACAAAA...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGTCTCTGCTCACGTTCTaGGCATTTATACTCAATCTT +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGESLLTF*AFILNL
Trigger: AAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTTGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTATGTTGAAAAAGACCTaGCCTTTGCCTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVMLKKT*PLPEGF
Trigger: GAAGCCTTCAGGCAAAGGTCAGGTCTTTTTCAACAT...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGACTCTTACTCAGTCATaGAGCTCTCTATTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGETLTQS*SSLLLR
Trigger: TCTAAGCAATAGAGAGCTTCATGACTGAGTAAGAGT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTCACTTGATTCACTGCTaGCTTCAAAACTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSHLIHC*LQNSYS
Trigger: TGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTG...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGCACTTGATTCACTGCTaGCTTCAAAACTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEHLIHC*LQNSYS
Trigger: TGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTG...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTCCTGAAGGCAAGTTCTaGAGTTCACCAGCGAAAATT +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTPEGKF*SSPAKI
Trigger: AATTTTCGCTGGTGAACTTCAGAACTTGCCTTCAGG...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAAAGTTGTCACTCTGGTaGTATGTTTTGGAGTGGACG +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAKLSLW*YVLEWT
Trigger: CGTCCACTCCAAAACATATCACCAGAGTGACAACTT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGAAGTTGTCACTCTGGTaGTATGTTTTGGAGTGGACG +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKKLSLW*YVLEWT
Trigger: CGTCCACTCCAAAACATATCACCAGAGTGACAACTT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTATTGCGCTGAATGGATaGAAAATATGCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFIALNG*KICSRR
Trigger: CCTTCTGCTGCATATTTTTCATCCATTCAGCGCAAT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSVTSHS*RTCCSC
Trigger: ACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTAC...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVCWMNL*SRSEHL
Trigger: TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCA...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: PANLWALDSLLTSKLLLSNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAATGGGCACTCACCAATaGTGTTGCCATCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRMGTHQ*CCHPQL
Trigger: AAGCTGGGGATGGCAACAGCATTGGTGAGTGCCCAT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCATTATGAGCCTCCATaGGTTCAGATATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVHYEPP*VQIFSQ
Trigger: CTGGGAAAATATCTGAACCCATGGAGGCTCATAATG...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAACTCAATCTTCTCTTTaGGCTTGGCCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQATQSSL*AWPDAF
Trigger: AAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTTACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: VLFASQCAFSDVLQGENTYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: PKVLFASQCAFSDVLQGESRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTTTTGTTTCTTTGGCTaGTCTGGGTCCTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVFCFFG*SGSCCP
Trigger: AGGACAACAGGACCCAGACCAGCCAAAGAAACAAAA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000623276.3
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTTCTTTGGGCTTGGCCTaGTGCCTTTCCAAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPSLGLA*CLSKLE
Trigger: CTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGA...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCTCTGCTCACGTTCTaGGCATTTATACTCAATCTT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSLLTF*AFILNL
Trigger: AAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAGTAAGACTGGAACTCTaGCACACATCAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRVRLEL*HTSDSQ
Trigger: CTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTAC...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTGGATTCTTACATGCTaGGCAAGGTGTGAGTTTAGT +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVWILTC*ARCEFS
Trigger: ACTAAACTCACACCTTGCTCAGCATGTAAGAATCCA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTTCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTATCTCCTCTCCAAGCTaGCTTTATTGTTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFISSPS*LYCLTS
Trigger: GGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAGAT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCATGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQACWMNL*SRSEHL
Trigger: TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCA...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAATGTTCCAAAAGGCCTaGATTCTGGCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERMFQKA*ILAKDF
Trigger: AAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACAT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAATGTTCCAAAAGGCCTaGATTCTGGCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTMFQKA*ILAKDF
Trigger: AAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACAT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTATGTTCCAAAAGGCCTaGATTCTGGCTAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVMFQKA*ILAKDF
Trigger: AAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACAT...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTCATTATGAGCCTCCATaGGTTCAGATATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVHYEPP*VQIFSQ
Trigger: CTGGGAAAATATCTGAACCCATGGAGGCTCATAATG...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAACTCAATCTTCTCTTTaGGCTTGGCCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSTQSSL*AWPDAF
Trigger: AAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFSRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAAATCTTGACATAATGTaGTGGGGAATGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSNLDIM*WGMGMG
Trigger: TCCCATCCCCATTCCCCACCACATTATGTCAAGATT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTGGAAACAGTATTCTATaGACTCCCAAGACCAGGATA +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVGNSIL*TPKTRI
Trigger: TATCCTGGTCTTGGGAGTCCATAGAATACTGTTTCC...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTCTCTGCTCACGTTCTaGGCATTTATACTCAATCTT +
Preference number: 4 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVSLLTF*AFILNL
Trigger: AAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAAATTATCTTTGCTTTTaGAAATGCTTCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTNYLCF*KCFHWG
Trigger: TCCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGATCTCCTCTCCAAGCTaGCTTTATTGTTTAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKISSPS*LYCLTS
Trigger: GGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAGAT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRVTSHS*RTCCSC
Trigger: ACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTAC...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERSCSEE*CLTLIL
Trigger: TAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGA...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTTCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFSCSEE*CLTLIL
Trigger: TAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGA...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCCTGCAGTGAAGAATaGTGTTTAACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSCSEE*CLTLIL
Trigger: TAGGATCAAAGTTAAACAGCATTCTTCACTGCAGGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTTTCTTTGGCTGGTCTaGGTCCAATGCTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLFLWLV*VQCCCH
Trigger: ATGGCAACAGCATTGGACCCAGACCAGCCAAAGAAA...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316606.10
ENST00000614088.1
CDS-3UTR CCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTTCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPSSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATCTTCTCTTTGGGCTTaGCCTGATGCCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSSLWA*PDAFPS
Trigger: ACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGT +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLIRSKC*MNLCSR
Trigger: ACGTGAGCAGAGATTCATCCAGCACTTGGACCTGAT...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: KVLFASQCAFSDVLQGENYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATACATTGATGGCTTTTaGAGTGACTATGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERYIDGF*SDYGFS
Trigger: AGAGAATCCATAGTCACTCCAAAAGCCATCAATGTA...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTSRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGACTTCTCGAGGTCCTGTaGTCTCTTCATAACGCAACT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRLLEVL*SLHNAT
Trigger: AGTTGCGTTATGAAGAGACCACAGGACCTCGAGAAG...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCATGTTGAAAAAGACCTaGCCTTTGCCTGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLMLKKT*PLPEGF
Trigger: GAAGCCTTCAGGCAAAGGTCAGGTCTTTTTCAACAT...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAGCATATCATCTACAGTaGAATTATTGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAAYHLQ*NYCGPK
Trigger: CTTTGGACCACAATAATTTCACTGTAGATGATATGC...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGAATTATCTTTGCTTTTaGAAATGCTTCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKNYLCF*KCFHWG
Trigger: TCCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTAATTATCTTTGCTTTTaGAAATGCTTCCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTNYLCF*KCFHWG
Trigger: TCCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCCATAACGCAACTGCCTaGATTGTTTGCACAATGGCT +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLHNATA*IVCTMA
Trigger: AGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATG...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATCTCCAAGATCCAGCTaGAAATCCTCCAGAACAACA +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSPRSS*KSSRTT
Trigger: TGTTGTTCTGGAGGATTTGCAGCTGGATCTTGGAGA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTTCTCCAAGATCCAGCTaGAAATCCTCCAGAACAACA +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPSPRSS*KSSRTT
Trigger: TGTTGTTCTGGAGGATTTGCAGCTGGATCTTGGAGA...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTACTCAATCTTCTCTTTaGGCTTGGCCTGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPTQSSL*AWPDAF
Trigger: AAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGT...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSSRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCAACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQATVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCAATCTTGACATAATGTaGTGGGGAATGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLNLDIM*WGMGMG
Trigger: TCCCATCCCCATTCCCCACCACATTATGTCAAGATT...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATTTTGTTTCTTTGGCTaGTCTGGGTCCACCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRFCFFG*SGSTCC
Trigger: ACAACAGGTGGACCCAGACCAGCCAAAGAAACAAAA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
3UTR CAA 72 bp CCACTATACTGGCACTGGAGTTATCAAGTCAGACAGTaGCTATTCAGATTAATTCAGCAAGGTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: PLYWHWSYQVRQ*LFRLIQQGSFK
Trigger: TTTGAATGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTGCCAGTATAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTTCAATGTGCCTTCTCTaGTGTTCTACAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPSMCLL*CSTRRE
Trigger: TTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGA...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTATTGCGCTGAATGGATaGAAAATATGCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPIALNG*KICSRR
Trigger: CCTTCTGCTGCATATTTTTCATCCATTCAGCGCAAT...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS-3UTR GCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTA +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLCWMNL*SRSEHL
Trigger: TAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCA...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTCTCTGCTCACGTTCTaGGCATTTATACTCAATCTT +
Preference number: 4 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLSLLTF*AFILNL
Trigger: AAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGA...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAACTCTTACTCAGTCATaGAGCTCTCTATTGCTTAGA +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRTLTQS*SSLLLR
Trigger: TCTAAGCAATAGAGAGCTTCATGACTGAGTAAGAGT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR TCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTCACTTGATTCACTGCTaGCTTCAAAACTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPHLIHC*LQNSYS
Trigger: TGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTG...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR GCA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTAATCTTCCCTTGTTCTaGTTAAGCCTGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPNLPLF*LSLQIC
Trigger: ACAGATTTGCAGGCTTAAGCAGAACAAGGGAAGATT...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAAGTCGGAAGGCTTTCTaGCATATGTTACACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSRKAF*HMLHLK
Trigger: TTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CCA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAACAGTGAAATTATTGTaGTCCAAAGCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRTVKLL*SKADFK
Trigger: CTTGAAGTCAGCTTTGGACCACAATAATTTCACTGT...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
3UTR CAA 72 bp TATAAAGATCATGATCTCCTCTCCAAGCTGACTTTATaGTTTAACTTCCGAAGTATTCCAGAACAAGCAACA +
Preference number: 4 (lower is better)
Translates to: YKDHDLLSKLTL*FNFRSIPEQAT
Trigger: TGTTGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAGATCATGATCTTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGAACGCTGGAGGACCTaGGCTCGATGGTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSERWRT*ARWCCR
Trigger: GCGGCAGCACCATCGAGCCAAGGTCCTCCAGCGTTC...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS TCA 90 bp TCAGAGACACTCCTGGTCAAGGGGCCTCAGAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCATCGCCGAGTGTCAGCTCTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SETLLVKGPQRTQTL*NSVLAHRRVSALAL
Trigger: AAGAGCTAGAGCTGACACTCGGCGATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCTCTGAGGCCCCTTGACCAGGAGTGTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS GCA 90 bp GTCTCCTCACCCTTCTCTTTCTCAGGCTTTGTAACTTCACACTCATaGCGAACCTGCTGTTCCTGTACTCCTTTCAGAGGGGCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VSSPFSFSGFVTSHS*RTCCSCTPFRGAIS
Trigger: GGAGATGGCCCCTCTGAAAGGAGTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTACAAAGCCTGAGAAAGAGAAGGGTGAGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATGCCTTTACTGTTTCCTaGCAGCTTGAATCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDAFTVS*QLESLF
Trigger: GAACAGGGATTCAAGCTGCAAGGAAACAGTAAAGGC...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATAACTGCCTGAATTGTTaGCACAATGGCTCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDNCLNC*HNGSCP
Trigger: TGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTAACTGCCTGAATTGTTaGCACAATGGCTCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFNCLNC*HNGSCP
Trigger: TGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTT...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS TCA 90 bp TTAGTGCTTCTCGAGGTCCTGTGGTCTCTTCATAACGCAACTGCCTaGATTGTTTGCACAATGGCTCCTGTCCAAGGCCTTTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: LVLLEVLWSLHNATA*IVCTMAPVQGLYCF
Trigger: GAAACAGTAAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAAGAGACCACAGGACCTCGAGAAGCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS CCA 90 bp TCCTGTGGTCTCTTCATAACGCAACTGCCTGAATTGTTTGCACAATaGCTCCTGTCCAAGGCCTTTACTGTTTCCTTGCAGCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: SCGLFITQLPELFAQ*LLSKAFTVSLQLES
Trigger: GGATTCAAGCTGCAAGGAAACAGTAAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAAGAGACCACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp ACGGTGACTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCACTCACCAATGCTGTaGCCATCCCCAGCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: TVTFPKVLFASQCAFSDVHSPML*PSPASD
Trigger: GTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGTG...AACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAGTCACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTCCCATTCTCAATCCTaGTCTCCTCACCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: VLFASQCAFSDVLQGENTSHSQS*SPHLVK
Trigger: CTTGACCAGGTGAGGAGACAAGGATTGAGAATGGGA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611552.2
CDS-3UTR CAA 90 bp CTCCAACTCAGCCCCCAAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTTTGGAGAACTTTCTTaGGACTGTATCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LQLSPQEFSDATVGYGDFFGELS*DCIFRD
Trigger: GTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAA...AAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTTGGGGGCTGAGTTGGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTGATACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: GERIEAGSLQLSPQEFSDTVLLV*ENFLWT
Trigger: AGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGT...ATCAGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTCTCCACAAGTATTTTTaGTTTCTTTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSLHKYF*FLWLVW
Trigger: CCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAG...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTCACTCACCAATGCTGTaGCCATCCCCAGCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTHSPML*PSPASD
Trigger: GTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGTG...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCACACTCACCAATGCTGTaGCCATCCCCAGCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQAHSPML*PSPASD
Trigger: GTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGTG...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR CAA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTATATGCAGCAGAAGGTaGTACTCTGTTTACCAGATC +
Preference number: 5 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSICSRR*YSVYQI
Trigger: GATCTGGTAAACAGAGTACAACCTTCTGCTGCATAT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS TCA 90 bp ATGTTCAATCAGGTCCAAGTGCTGGATGAATCTCTGCTCACGTTCTaGGCATTTATACTCAATCTTCTCTTTGGGCTTGGCCTGATGCCT +
Preference number: 5 (lower is better)
Translates to: MFNQVQVLDESLLTF*AFILNLLFGLGLMP
Trigger: AGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS TCA 90 bp TTCTCTCTAGAGAGGACTTTCTTATGTCCTGTAAGACTGGAACTCTaGCACACATCAGACTCGCAGAGTTTCTTTCCCGTGTGTGTACTC +
Preference number: 5 (lower is better)
Translates to: FSLERTFLCPVRLEL*HTSDSQSFFPVCVL
Trigger: GAGTACACACACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAAGTCCTCTCTAGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTTCCCATTCTCAATCCTaGTCTCCTCACCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PANLWALDSLLTSKLLLSSHSQS*SPHPSL
Trigger: AAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGA...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTCCACACTCGTTACATaGATGGCTTTTGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: VLFASQCAFSDVLQGENTSTLVT*MAFGVT
Trigger: AGTCACTCCAAAAGCCATCAATGTAACGAGTGTGGA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAAGGAGAGAGAATAGAGGCAGGGAGCCTCCAACTCAGCCCCCAAGAATTTTCTAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: KGERIEAGSLQLSPQEFSNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...AGAAAATTCTTGGGGGCTGAGTTGGAGGCTCCCTGCCTCTATTCTCTCTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGCAGGATATATATGGATaGCAGAGGCTGAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PKVLFASQCAFSDVLQGEQDIYG*QRLRAE
Trigger: TTCAGCCCTCAGCCTCTGCAATCCATATATATCCTG...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTGCCTGAATTGTTaGCACAATGGCTCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: PKVLFASQCAFSDVLQGENCLNC*HNGSCP
Trigger: TGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTT...CTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAACGCAACTGCCTGAATaGTTTGCACAATGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTTQLPE*FAQWLL
Trigger: CAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGT...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTACGCAACTGCCTGAATaGTTTGCACAATGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFTQLPE*FAQWLL
Trigger: CAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTGTCTGGGTCCACCTGTaGTCCTGTTTCTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVVWVHL*SCFSKI
Trigger: GATCTTGGAGAAACAGGACAACAGGTGGACCCAGAC...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS TCA 90 bp AGAGCCCTCATTATGAGCCTCCATGGGTTCAGATATTTTCCCAGATaGCTCTACTCTTCCACAAGAGTCTGTTACTACAATAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RALIMSLHGFRYFPR*LYSSTRVCYYNKLP
Trigger: GGGAAGCTTATTGTAGTAACAGACTCTTGTGGAAGAGTAGAGTCATCTGGGAAAATATCTGAACCCATGGAGGCTCATAATGAGGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS TCA 90 bp TTCCCGTGTGTGTACTCGCATGTTCAATCAGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTGAGCATTTATACTCAATCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FPCVYSHVQSGPSAG*ISAHVLSIYTQSSL
Trigger: AAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS GCA 90 bp TGTGTACTCGCATGTTCAATCAGGTCCAAGTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTATACTCAATCTTCTCTTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CVLACSIRSKCWMNL*SRSEHLYSIFSLGL
Trigger: CAAGCCCAAAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS GCA 90 bp AGTTTCTTTCCCGTGTGTGTACTCGCATGTTCAATCAGGTCCAAGTaGTGGATGAATCTCTGCTCACGTTCTGAGCATTTATACTCAATC +
Preference number: 5 (lower is better)
Translates to: SFFPVCVLACSIRSK*WMNLCSRSEHLYSI
Trigger: GATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGGAAAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS CCA 90 bp TTCTTTCCCGTGTGTGTACTCGCATGTTCAATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGTTCTGAGCATTTATACTCAATCTTC +
Preference number: 5 (lower is better)
Translates to: FFPVCVLACSIRSKC*MNLCSRSEHLYSIF
Trigger: GAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCCTCCACAAGTATTTTTaGTTTCTTTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VLFASQCAFSDVLQGENTLHKYF*FLWLVW
Trigger: CCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAG...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTCCCATTCTCAATCCTaGTCTCCTCACCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: KVLFASQCAFSDVLQGENSHSQS*SPHPSL
Trigger: AAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp GTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACCTTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: VLFASQCAFSDVLQGENTFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...GGTGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTTTTGGAGAACTTTCTTaGGACTGTATCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFFGELS*DCIFRD
Trigger: GTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAA...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCATCCCATTCTCAATCCTaGTCTCCTCACCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQASHSQS*SPHPSL
Trigger: AAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGA...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTCCCATTCTCAATCCTaGTCTCCTCACCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVSHSQS*SPHPSL
Trigger: AAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGA...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGATCCACACTCGTTACATaGATGGCTTTTGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERSTLVT*MAFGVT
Trigger: AGTCACTCCAAAAGCCATCAATGTAACGAGTGTGGA...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACATCCACACTCGTTACATaGATGGCTTTTGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTSTLVT*MAFGVT
Trigger: AGTCACTCCAAAAGCCATCAATGTAACGAGTGTGGA...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTCAGGATATATATGGATaGCAGAGGCTGAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTQDIYG*QRLRAE
Trigger: TTCAGCCCTCAGCCTCTGCAATCCATATATATCCTG...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTCAGGATATATATGGATaGCAGAGGCTGAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVQDIYG*QRLRAE
Trigger: TTCAGCCCTCAGCCTCTGCAATCCATATATATCCTG...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTATATGCAGCAGAAGGTaGTACTCTGTTTACCAGATC +
Preference number: 5 (lower is better)
Translates to: PANLWALDSLLTSKLLLSICSRR*YSVYQI
Trigger: GATCTGGTAAACAGAGTACAACCTTCTGCTGCATAT...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGACTCCACAAGTATTTTTaGTTTCTTTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERLHKYF*FLWLVW
Trigger: CCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAG...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGTCCACACTCGTTACATaGATGGCTTTTGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKSTLVT*MAFGVT
Trigger: AGTCACTCCAAAAGCCATCAATGTAACGAGTGTGGA...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGAGTCTGGGTCCACCTGTaGTCCTGTTTCTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRVWVHL*SCFSKI
Trigger: GATCTTGGAGAAACAGGACAACAGGTGGACCCAGAC...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421553.7
ENST00000619937.4
CDS-3UTR CAA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTCTGGTCTGGGTCCTGTaGTCCTGTTTCTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPLVWVL*SCFSKI
Trigger: GATCTTGGAGAAACAGGACAACAGGACCCAGACCAG...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623276.3
CDS-3UTR CAA 90 bp AGGGCTGAAGTTGTCACTCTGGTGATATGTTTTGGAGTGGACGCCCCTAATTTTTCTGCAGGGATTTGTTaGAAACCTTTATTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: RAEVVTLVICFGVDAPNFSAGIC*KPLLEG
Trigger: TCCTTCTAATAAAGGTTTCAAACAAATCCCTGCAGA...AAAATTAGGGGCGTCCACTCCAAAACATATCACCAGAGTGACAACTTCAGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACTTTGGAGAACTTTCTTaGGACTGTATCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KVLFASQCAFSDVLQGENFGELS*DCIFRD
Trigger: GTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAA...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACATTTGGAGAACTTTCTTaGGACTGTATCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KCCLLVNVPSLMFYKERTFGELS*DCIFRD
Trigger: GTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAA...TGTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: KVLFASQCAFSDVLQGENTVLLV*ENFLWT
Trigger: AGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGT...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFTVLLV*ENFLWT
Trigger: AGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTCTCCACAAGTATTTTTaGTTTCTTTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: NHAVMLHALRCPAVKNAVLHKYF*FLWLVW
Trigger: CCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAG...AACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTCCTCTCCAAGCTGACTTTATTGTTTAACTTCCGAAGTATTCCAGAACAAGCACTCCACAAGTATTTTTaGTTTCTTTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LLSKLTLLFNFRSIPEQALHKYF*FLWLVW
Trigger: CCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAG...TGCTTGTTCTGGAATACTTCGGAAGTTAAACAATAAAGTCAGCTTGGAGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CTTTTCCTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGTTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: LFLKCCLLVNVPSLMFYKFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...CTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CTAAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LKCCLLVNVPSLMFYKERNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...TCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCACGCAACTGCCTGAATaGTTTGCACAATGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLTQLPE*FAQWLL
Trigger: CAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGT...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CCTGCAAATCTGTGGGCACTTGATTCACTGCTGACTTCAAAACTCTTACTCAGTTCTGCAGGGATTTGTTaGAAACCTTTATTAGAAGGA +
Preference number: 5 (lower is better)
Translates to: PANLWALDSLLTSKLLLSSAGIC*KPLLEG
Trigger: TCCTTCTAATAAAGGTTTCAAACAAATCCCTGCAGA...ACTGAGTAAGAGTTTTGAAGTCAGCAGTGAATCAAGTGCCCACAGATTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CATGAAGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTCCCATTCTCAATCCTaGTCTCCTCACCCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: HEALYCLEYIIMQLCYMLSHSQS*SPHPSL
Trigger: AAGAGAAGGGTGAGGAGACAAGGATTGAGAATGGGA...GAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCATTCCTAAAGTGCTGTTaGCTAGTCAATGTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSFLKCC*LVNVPS
Trigger: AGAAGGCACATTGACTAGCAAACAGCACTTTAGGAA...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp TGCAGTTATGTTACATGCTCTGAGATGTCCTGCAGTGAAGAATGCTGTTTAACTAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: CSYVTCSEMSCSEECCLTNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...AGTTAAACAGCATTCTTCACTGCAGGACATCTCAGAGCATGTAACATAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp AAAGTGCTGTTTGCTAGTCAATGTGCCTTCTCTGATGTTCTACAAGGAGAGAACAAATTATCTTTGCTTTaGAAAATGCTTCCACTGGGG +
Preference number: 5 (lower is better)
Translates to: KVLFASQCAFSDVLQGENKLSLL*KMLPLG
Trigger: CCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATTT...GTTCTCTCCTTGTAGAACATCAGAGAAGGCACATTGACTAGCAAACAGCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AAGAATTTTCTGATGCCACAGTGGGCTACGGTGACTTTTCCTAAAGTGCTGTTTAAATTATCTTTGCTTTaGAAAATGCTTCCACTGGGG +
Preference number: 5 (lower is better)
Translates to: KNFLMPQWATVTFPKVLFKLSLL*KMLPLG
Trigger: CCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATTT...AAACAGCACTTTAGGAAAAGTCACCGTAGCCCACTGTGGCATCAGAAAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTGCCTTTACTGTTTCCTaGCAGCTTGAATCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPAFTVS*QLESLF
Trigger: GAACAGGGATTCAAGCTGCAAGGAAACAGTAAAGGC...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACT +
Preference number: 5 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSTVLLV*ENFLWT
Trigger: AGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp AGCTCTCTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATCCACACTCGTTACATaGATGGCTTTTGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: SSLLLRVYNHAVMLHALRSTLVT*MAFGVT
Trigger: AGTCACTCCAAAAGCCATCAATGTAACGAGTGTGGA...TCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAGAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS-3UTR CAA 90 bp CACTGGAGTTATCAAGTCAGACAGTTGCTATTCAGATTAATTCAGCAAGGTTCAAAATTATCTTTGCTTTaGAAAATGCTTCCACTGGGG +
Preference number: 5 (lower is better)
Translates to: HWSYQVRQLLFRLIQQGSKLSLL*KMLPLG
Trigger: CCCCAGTGGAAGCATTTTCAAAAGCAAAGATAATTT...TGAACCTTGCTGAATTAATCTGAATAGCAACTGTCTGACTTGATAACTCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
CDS-3UTR CAA 90 bp CTATTGCTTAGAGTATATAATCATGCAGTTATGTTACATGCTCTGAGATGTCCTAATATCAATCTTCCCTaGTTCTGCTTAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLLRVYNHAVMLHALRCPNINLP*FCLSLQ
Trigger: TTGCAGGCTTAAGCAGAACAAGGGAAGATTGATATT...AGGACATCTCAGAGCATGTAACATAACTGCATGATTATATACTCTAAGCAATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS TCA 72 bp CTCCTGGTCAAGGGGCCTCAGAGGACCCAAACGCTCTaGAACAGCGTCTTAGCTCATCGCCGAGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LLVKGPQRTQTL*NSVLAHRRVSA
Trigger: AGCTGACACTCGGCGATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCTCTGAGGCCCCTTGACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000617168.4
CDS CAA 72 bp TCAGGGGAGCCAGGGAATGGGCACTCACCAATGCTGTaGCCATCCCCAGCTTCAGACTGTTCTCCTTGTTTT +
Preference number: 6 (lower is better)
Translates to: SGEPGNGHSPML*PSPASDCSPCF
Trigger: AAAACAAGGAGAACAGTCTGAAGCTGGGGATGGCAACAGCATTGGTGAGTGCCCATTCCCTGGCTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS TCA 72 bp CTCGAGGTCCTGTGGTCTCTTCATAACGCAACTGCCTaGATTGTTTGCACAATGGCTCCTGTCCAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LEVLWSLHNATA*IVCTMAPVQGL
Trigger: AAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAAGAGACCACAGGACCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS GCA 72 bp TTCTCAGGCTTTGTAACTTCACACTCATGCCGAACCTaGTGTTCCTGTACTCCTTTCAGAGGGGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: FSGFVTSHSCRT*CSCTPFRGAIS
Trigger: GGAGATGGCCCCTCTGAAAGGAGTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTACAAAGCCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS CAA 72 bp AGGTCCTGTGGTCTCTTCATAACGCAACTGCCTGAATaGTTTGCACAATGGCTCCTGTCCAAGGCCTTTACT +
Preference number: 6 (lower is better)
Translates to: RSCGLFITQLPE*FAQWLLSKAFT
Trigger: AGTAAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAAGAGACCACAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS CAA 90 bp GTCCAATGCTGTTGCCATCCCCAGCTTCAGACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACTGTATCTTCAGAGACACTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: VQCCCHPQLQTVLLV*ENFLWTVSSETLLV
Trigger: GACCAGGAGTGTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGTCTGAAGCTGGGGATGGCAACAGCATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316606.10
CDS CAA 90 bp CACCAATGCTGTTGCCATCCCCAGCTTCAGACTGTTCTCCTTGTTTaGGAGAACTTTCTTTGGACTGTATCTTCAGAGACACTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: HQCCCHPQLQTVLLV*ENFLWTVSSETLLV
Trigger: GACCAGGAGTGTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGTCTGAAGCTGGGGATGGCAACAGCATTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000623276.3
CDS TCA 72 bp CAGGTCCAAGTGCTGGATGAATCTCTGCTCACGTTCTaGGCATTTATACTCAATCTTCTCTTTGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: QVQVLDESLLTF*AFILNLLFGLG
Trigger: GCCAAGCCCAAAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS TCA 72 bp GAGAGGACTTTCTTATGTCCTGTAAGACTGGAACTCTaGCACACATCAGACTCGCAGAGTTTCTTTCCCGTG +
Preference number: 6 (lower is better)
Translates to: ERTFLCPVRLEL*HTSDSQSFFPV
Trigger: CACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAAGTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS CCA 72 bp CTCTTCATAACGCAACTGCCTGAATTGTTTGCACAATaGCTCCTGTCCAAGGCCTTTACTGTTTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LFITQLPELFAQ*LLSKAFTVSLQ
Trigger: CTGCAAGGAAACAGTAAAGGCCTTGGACAGGAGCCATTGTGCAAACAATTCAGGCAGTTGCGTTATGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421553.7
ENST00000617168.4
ENST00000619937.4
ENST00000623276.3
CDS CCA 72 bp GTGTGTGTACTCGCATGTTCAATCAGGTCCAAGTGCTaGATGAATCTCTGCTCACGTTCTGAGCATTTATAC +
Preference number: 6 (lower is better)
Translates to: VCVLACSIRSKC*MNLCSRSEHLY
Trigger: GTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS TCA 72 bp GTGTACTCGCATGTTCAATCAGGTCCAAGTGCTGGATaGATCTCTGCTCACGTTCTGAGCATTTATACTCAA +
Preference number: 6 (lower is better)
Translates to: VYSHVQSGPSAG*ISAHVLSIYTQ
Trigger: TTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3
CDS GCA 72 bp GCATGTTCAATCAGGTCCAAGTGCTGGATGAATCTCTaGTCACGTTCTGAGCATTTATACTCAATCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ACSIRSKCWMNL*SRSEHLYSIFS
Trigger: AGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316606.10
ENST00000421553.7
ENST00000611552.2
ENST00000614088.1
ENST00000619937.4
ENST00000623276.3