RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN25 (Homo sapiens)

Ensembl gene IDs: ENSG00000197037

Ensembl transcript IDs: ENST00000262941.7, ENST00000334715.7, ENST00000394150.5, ENST00000394152.7, ENST00000431485.2, ENST00000466948.1, ENST00000473646.5, ENST00000481424.5, ENST00000485586.1, ENST00000493443.5

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTGTGGGTTTTGACTTCGTCAGGCAGGGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGCGCACTGCCTGCAGGGCCACCAGGC +
Preference number: 1 (lower is better)
Translates to: ELWVLTSSGRGMAPC*GGGSPGALPAGPPG
Trigger: GCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 90 bp GCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGG +
Preference number: 1 (lower is better)
Translates to: ARPCLSRVGEWVGRR*DQCFPAAITLHPAR
Trigger: CCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 90 bp TGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: CLSRVGEWVGRRWDQ*FPAAITLHPARPCS
Trigger: ACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR TCA 90 bp GTGCTTGCTCCTGGAAGGCCCGTGTCTCATCTCCAGGGTCCTGACTaGGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: VLAPGRPVSHLQGPD*AAPRYLGLDLELLP
Trigger: GGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGAGACACGGGCCTTCCAGGAGCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 90 bp GCAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTaGGGTCACATGCCTCCACTCCTCCTCAGGGAAGGCCAGGGCCAT +
Preference number: 1 (lower is better)
Translates to: AVLRFHILPKAVYLG*GHMPPLLLREGQGH
Trigger: ATGGCCCTGGCCTTCCCTGAGGAGGAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 90 bp ACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTCCACTCCTCCTCAGGGAAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: TLQSCGSTYSPKQSI*AGVTCLHSSSGKAR
Trigger: CCTGGCCTTCCCTGAGGAGGAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR GCA 90 bp CCTGCAGTGAGAAAGATGAATGATGGTGCTGCCTGCCACCTGCTATaGTCACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: PAVRKMNDGAACHLL*SLHQRLLAVLGLLV
Trigger: CACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCAGGTGGCAGGCAGCACCATCATTCATCTTTCTCACTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 90 bp GCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGC +
Preference number: 1 (lower is better)
Translates to: ALSKPGLAFPALANG*EGDGTSAFLQPSPC
Trigger: GCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 90 bp GGGTGGGAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGCT +
Preference number: 1 (lower is better)
Translates to: GWEGDGTSAFLQPSP*TPQGPAVRKMNDGA
Trigger: AGCACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CCA 90 bp TGGGGAAGGCCACACTCAGGCCAGAAGCCTCCCACTGAGTCTGCCTaGCTGTCAGCCCTGCCTAGCTGCTCTGATAATTACGGGGGAAAA +
Preference number: 1 (lower is better)
Translates to: WGRPHSGQKPPTESA*LSALPSCSDNYGGK
Trigger: TTTTCCCCCGTAATTATCAGAGCAGCTAGGCAGGGCTGACAGCCAGGCAGACTCAGTGGGAGGCTTCTGGCCTGAGTGTGGCCTTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 90 bp GTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTaGGAATGCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCA +
Preference number: 1 (lower is better)
Translates to: VVMGRCSHGHTAQIP*ECLGSWAVACIPNA
Trigger: TGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 90 bp AGCAGCCCCGTGTGGACATCTCAGATACATTTACGACCCAGTCAGTaGAGCCTCGTGGGCACAGCTAATGAGCCAGGAAGACCAAGGAGC +
Preference number: 1 (lower is better)
Translates to: SSPVWTSQIHLRPSQ*SLVGTANEPGRPRS
Trigger: GCTCCTTGGTCTTCCTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAAATGTATCTGAGATGTCCACACGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 90 bp CCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTaGAGGAGAAAATCTCAGCCTGAACTGAACCGCAGGAGACTGCTT +
Preference number: 1 (lower is better)
Translates to: PLLPALFGRGTQTVH*RRKSQPELNRRRLL
Trigger: AAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR TCA 90 bp AGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCC +
Preference number: 1 (lower is better)
Translates to: SLSYDPAGKTEPSGR*GPSYQHVSRFCLYS
Trigger: GGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR TCA 90 bp CGGCAGGGGGACACAGACAGTCCACTGAAGGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: RQGDTDSPLKEKISA*TEPQETASLKHWKK
Trigger: TTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGTCCCCCTGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CCA 90 bp TGTGGACATCTCAGATACATTTACGACCCAGTCAGTGCAGCCTCGTaGGCACAGCTAATGAGCCAGGAAGACCAAGGAGCGTCATTTGCT +
Preference number: 1 (lower is better)
Translates to: CGHLRYIYDPVSAAS*AQLMSQEDQGASFA
Trigger: AGCAAATGACGCTCCTTGGTCTTCCTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAAATGTATCTGAGATGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 90 bp CCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTaGCATGTTTGTTACAGGGCCTCAATAAATACTTGGGAAATGGGT +
Preference number: 1 (lower is better)
Translates to: PYFIHGCVSSTQKSS*HVCYRASINTWEMG
Trigger: ACCCATTTCCCAAGTATTTATTGAGGCCCTGTAACAAACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITGSWRC*VFWCRL
Trigger: CAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAAGGGGGATGGCACCGTaGTGGGGAGGAGGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGRGMAP*WGGGSP
Trigger: TGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCT...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 2 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGGAGCAGATCCCAGCTaGGGAGGGAAGATCCAGCAC +
Preference number: 2 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITGADPS*GGKIQH
Trigger: GTGCTGGATCTTCCCTCCCCAGCTGGGATCTGCTCC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp CTCCCACCGCCTGGAGAGACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: LPPPGETLQSCGSTYSPKRPGPA*RTGSAC
Trigger: GCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCT...CTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGTCCTCCGGTGCACCTaGAGGTGCTGCCTGCGGCTG +
Preference number: 2 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYVLRCT*RCCLRL
Trigger: CAGCCGCAGGCAGCACCTGCAGGTGCACCGGAGGAC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp CACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGTTGAGGATGCCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTC +
Preference number: 2 (lower is better)
Translates to: HCTSGSWRCWVFWCRLRMPKQSI*AGVTCL
Trigger: GAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGG...CATCCTCAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CAA 90 bp CCACACTCAGGGCACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGGATGGCACCGTGCTGGGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PHSGHWKGFQKELWV*TSSGRGMAPCWGGG
Trigger: TCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR TCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAACCTGGGTCTGGACCTTaGACTCCTTCCCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: EALSKPGLAFPALANGWEPGSGP*TPSPGG
Trigger: GCCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGG...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR TCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGGTGCTGCCTGCGGCTaGAGCTCTTCCAGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFGAACG*SSSSSP
Trigger: GGGACTGCTGGAAGAGCTTCAGCCGCAGGCAGCACC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAACTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: EALSKPGLAFPALANGWELQPSP*TPQGPA
Trigger: TGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAG...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGTGTGCGTCCTCCGGTaGACCTGCAGGTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFVCVLR*TCRCCL
Trigger: CAGGCAGCACCTGCAGGTGCACCGGAGGACGCACAC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CAA 90 bp TGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: CSLEALSKPGLAFPA*ANGWEGDGTSAFLQ
Trigger: CTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHEKISA*TEPQET
Trigger: AGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTC...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp CATCATCCCCAGTGGGTGTCCAGGACCCCTAGTGCCTTGGATGACAAGGGTCTGGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 2 (lower is better)
Translates to: HHPQWVSRTPSALDDKGLEPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...CAGACCCTTGTCATCCAAGGCACTAGGGGTCCTGGACACCCACTGGGGATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGGTGGGGGAAGAGTCTaGGCTATGACCCTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYGGGRV*AMTLQA
Trigger: TGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGGATGGACCTCTGGTTaGAGCTTCGCCCGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAGWTSG*SFARRQ
Trigger: CTGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp CATCATCCCCAGTGGGTGTCCAGGACCCCTAGTGCCTTGGATGACAAGGGTCTGTCATGGGCTGTCGCATaGATCCCCAACGCACAACCC +
Preference number: 2 (lower is better)
Translates to: HHPQWVSRTPSALDDKGLSWAVA*IPNAQP
Trigger: GGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGA...CAGACCCTTGTCATCCAAGGCACTAGGGGTCCTGGACACCCACTGGGGATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGATCTTCGTGGGTTCGCTaGTGCCTGACGAGATTGGAG +
Preference number: 2 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGSSWVR*CLTRLE
Trigger: CTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGA...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGATTGAGGATGGACCTCTaGTTGAAGCTTCGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGLRMDL*LKLRPQ
Trigger: CTGCGGGCGAAGCTTCAACCAGAGGTCCATCCTCAA...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR TCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 2 (lower is better)
Translates to: IPNAQPPEASRLVSHSPREPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGGGACCAGTGCTTTCCTaGAGCCATCACCTTGCACCC +
Preference number: 2 (lower is better)
Translates to: SLEALSKPGLAFPALANGGPVLS*SHHLAP
Trigger: GGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCC...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTGCTGCCTGCCACCTaGTATGCTCACTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVLPAT*YAHCTS
Trigger: GCTGGTGCAGTGAGCATAGCAGGTGGCAGGCAGCAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGCCTTTCCCGCGTTaGCGAATGGGTGGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPALPFPR*RMGGKA
Trigger: CGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGAATGCCTCGGGTCATaGGCTGTCGCATGCATCCCC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFECLGS*AVACIP
Trigger: GGGGATGCATGCGACAGCCCATGACCCGAGGCATTC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTCCCCAAACCTCTCTaGTGTCAGTGCCACCAGCGC +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAFPKPL*CQCHQR
Trigger: GCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFRRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCTCATGGGCTGTCGCATaGATCCCCAACGCACAACCC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFSWAVA*IPNAQP
Trigger: GGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGA...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCTGCTGGGTCTTCTGGTaGCGGTTGAGGATGGACCTC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFCWVFW*RLRMDL
Trigger: GAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCA...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGGGCAGGAGTGGTCATaGGAAGATGTTCTCACGGGC +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAGQEWS*EDVLTG
Trigger: GCCCGTGAGAACATCTTCCCATGACCACTCCTGCCC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCCTGCTCCTCGGTACCTaGGTCTGGACCTTGAACTCC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFLLLGT*VWTLNS
Trigger: GGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAG...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGCCAGCTGCCATCTCTTaGTCTCTGGGATTCACTGCG +
Preference number: 2 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRPAAIS*SLGFTA
Trigger: CGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGG...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CAA 90 bp GCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTC +
Preference number: 2 (lower is better)
Translates to: ALRKMRSQLPTRVKV*PLLPALFGRGTQTV
Trigger: GACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKREPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp CACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTTGACTTCGTCAGGCAGGGGGGAAGAGTCTGAGCTATaGCCCTGCAGGCAAGACAGA +
Preference number: 2 (lower is better)
Translates to: HWKGFQKELWVLTSSGRGEESEL*PCRQDR
Trigger: TCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTC...CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRRRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 2 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGCAGGAGGGCAGGAGTaGTCATGGGAAGATGTTCTC +
Preference number: 2 (lower is better)
Translates to: WEDVLTGTQHRYPENASGAGGQE*SWEDVL
Trigger: GAGAACATCTTCCCATGACCACTCCTGCCCTCCTGC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTERSCGF*LRQAGG
Trigger: TCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCCAGGCCCAGAGGATTTaGAGGAATATCCACGGGTTC +
Preference number: 2 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFQAQRI*RNIHGF
Trigger: GAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTG...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTAATCTCAGCCTGAACTaGACCGCAGGAGACTGCTTC +
Preference number: 2 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPNLSLN*TAGDCF
Trigger: GAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATT...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLREKISA*TEPQET
Trigger: AGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGACACAGACAGTCCACTaGAGGAGAAAATCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRTQTVH*RRKSQP
Trigger: AGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGT...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCACAGCACAGATACCCTaGGAATGCCTCGGGTCATGG +
Preference number: 2 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPTAQIP*ECLGSW
Trigger: CCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAGGGAAATGGGTCCAATaGGAATGGGGTGAAATTAAT +
Preference number: 2 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGGKWVQ*EWGEIN
Trigger: ATTAATTTCACCCCATTCTCATTGGACCCATTTCCC...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGCACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR TCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACAATCTCAGCCTGAACTaGACCGCAGGAGACTGCTTC +
Preference number: 2 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHNLSLN*TAGDCF
Trigger: GAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATT...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGACAGCACAGATACCCTaGGAATGCCTCGGGTCATGG +
Preference number: 2 (lower is better)
Translates to: SITEEQQQPRVDISDTFTTAQIP*ECLGSW
Trigger: CCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGT...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYRWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACCACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCAGGCCCAGAGGATTTaGAGGAATATCCACGGGTTC +
Preference number: 2 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPQAQRI*RNIHGF
Trigger: GAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAGGCCATATCTTTAAATaGCCCCAACCCCTGCGATCC +
Preference number: 2 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEGHIFK*PQPLRS
Trigger: GGATCGCAGGGGTTGGGGCCATTTAAAGATATGGCC...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR TCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGAATATCCACGGGTTCTaGAGATCAGGTACATCCACG +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRNIHGF*RSGTST
Trigger: CGTGGATGTACCTGATCTTCAGAACCCGTGGATATT...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: KQLCSLEALSKPGLAFPARWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGCACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTGAATGCCTCGGGTCATaGGCTGTCGCATGCATCCCC +
Preference number: 2 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCECLGS*AVACIP
Trigger: GGGGATGCATGCGACAGCCCATGACCCGAGGCATTC...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGGAGCAGATCCCAGCTaGGGAGGGAAGATCCAGCAC +
Preference number: 2 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSGADPS*GGKIQH
Trigger: GTGCTGGATCTTCCCTCCCCAGCTGGGATCTGCTCC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAATTCACACAGTTGCCTaGGAGCAGATCCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETIHTVA*EQIPAG
Trigger: CCCAGCTGGGATCTGCTCCCAGGCAACTGTGTGAAT...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAACCCAGGTGGGTTCTCTaGTGCTTCATCAGGTATTCT +
Preference number: 2 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEPRWVL*CFIRYS
Trigger: AGAATACCTGATGAAGCACCAGAGAACCCACCTGGG...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR TCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAAATATCCACGGGTTCTaGAGATCAGGTACATCCACG +
Preference number: 2 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTENIHGF*RSGTST
Trigger: CGTGGATGTACCTGATCTTCAGAACCCGTGGATATT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGTAACAAGAGGTAGGTaGCAAATGCATTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRVTRGR*QMHFRA
Trigger: TGCCCTGAAATGCATTTGTCACCTACCTCTTGTTAC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCATGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSWVGRR*DQCFPA
Trigger: TGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCA...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGTTGTTTAGCACCACTTaGGTAAGAGATGGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRLFSTT*VRDGSS
Trigger: GCTGCTTCCATCTCTTACCCAAGTGGTGCTAAACAA...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGGGCAGGAGTGGTCATaGGAAGATGTTCTCACGGGC +
Preference number: 2 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSGQEWS*EDVLTG
Trigger: GCCCGTGAGAACATCTTCCCATGACCACTCCTGCCC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR CAA 90 bp TCAGGGCAAGATGCTGACAAAGCAATGAATACAGGCCCAGAGGATTaGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAG +
Preference number: 2 (lower is better)
Translates to: SGQDADKAMNTGPED*QEYPRVLKIRYIHE
Trigger: CTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTGTATTCATTGCTTTGTCAGCATCTTGCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR TCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGGAAGAGTCTGAGCTATaGCCCTGCAGGCAAGACAGA +
Preference number: 2 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQEESEL*PCRQDR
Trigger: TCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTC...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 2 (lower is better)
Translates to: TEPQETASLKHWKKNCLARRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAACACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR GCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAAGTAAAGAACCCAGCTaGCATCTCTTGGTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKSKEPS*HLLVSG
Trigger: CCCAGAGACCAAGAGATGGCAGCTGGGTTCTTTACT...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCATGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: TEPQETASLKHWKKNCLAWVGRR*DQCFPA
Trigger: TGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCA...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGCCTCAATAAATACTTaGGAAATGGGTCCAATGAGA +
Preference number: 2 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRASINT*EMGPMR
Trigger: TCTCATTGGACCCATTTCCCAAGTATTTATTGAGGC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR CAA 90 bp TATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTTaGTTACAGGGCCTCAATAAATACTTGGGAAATGGGTCCAATGAG +
Preference number: 2 (lower is better)
Translates to: YSWMCLKHPEEFLTC*LQGLNKYLGNGSNE
Trigger: CTCATTGGACCCATTTCCCAAGTATTTATTGAGGCCCTGTAACAAACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CAA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCCCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: KPGLAFPALANGWEGDGTPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CCA 72 bp GTTTTGACTTCGTCAGGCAGGGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGCGCACTGCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: VLTSSGRGMAPC*GGGSPGALPAG
Trigger: CCCTGCAGGCAGTGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CAA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 72 bp TCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTTGCTCCTGGAAGGCCCGT +
Preference number: 3 (lower is better)
Translates to: SLGFTAGRPGPA*RTGSACSWKAR
Trigger: ACGGGCCTTCCAGGAGCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 72 bp TGCTATGCTCACTGCACCAGCGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTGAGGATGGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: CYAHCTSGSWRC*VFWCRLRMDLW
Trigger: CCAGAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CAA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCACCTGGGTCTGGACCTaGAACTCCTTCCCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGTWVWT*NSFPRG
Trigger: CCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGT...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CAA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGAGGACCCCTAGTGCCTaGGATGACAAGGGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITRTPSA*DDKGLE
Trigger: CTCCAGACCCTTGTCATCCAAGGCACTAGGGGTCCT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 72 bp TGCTCCTGGAAGGCCCGTGTCTCATCTCCAGGGTCCTaGCTGAGCTGCTCCTCGGTACCTGGGTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: CSWKARVSSPGS*LSCSSVPGSGP
Trigger: AGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGAGACACGGGCCTTCCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR TCA 72 bp GGATTCTCTGGTGTCGGACCAGCCGCTCCCCTTTGCTaGACCGCTTCCCGCACACCTGGCACCCATATGGCT +
Preference number: 3 (lower is better)
Translates to: GFSGVGPAAPLC*TASRTPGTHMA
Trigger: AGCCATATGGGTGCCAGGTGTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGCTGGTCCGACACCAGAGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CAA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTCCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: WEDVLTGTQHRYPENASGPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCTTCCTGTGGGGGTTTaGCCTCCTTTTCCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHLPVGV*PPFPCS
Trigger: GGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAG...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR TCA 72 bp GGCACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGATGGCACCGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GTGKASRRSCGF*LRQAGGWHRAG
Trigger: CCCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 72 bp TGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCAGCCATCACCTTGCAC +
Preference number: 3 (lower is better)
Translates to: CLSRVGEWVGRR*DQCFPAAITLH
Trigger: GTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGACCTTTACTCCCAGCTTaGTTCGGCAGGGGGACACAG +
Preference number: 3 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGPLLPA*FGRGTQ
Trigger: CTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 72 bp TCCTTGCTCCCACCGCCTGGAGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCAAAGCAGTCTATCTGG +
Preference number: 3 (lower is better)
Translates to: SLLPPPGETLQS*GSTYSPKQSIW
Trigger: CCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCGGTGGGAGCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CCA 72 bp TCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTCCACTCCTCCTCAGGG +
Preference number: 3 (lower is better)
Translates to: SCGSTYSPKQSI*AGVTCLHSSSG
Trigger: CCCTGAGGAGGAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR-3UTR CAA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTCTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: WEDVLTGTQHRYPENASGLAFPA*ANGWEG
Trigger: GCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAG...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITTRVKV*PLLPAL
Trigger: CAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 72 bp GGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCAGTGAGAAAGATGAAT +
Preference number: 3 (lower is better)
Translates to: GDGTSAFLQPSP*TPQGPAVRKMN
Trigger: ATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGCCTTTACTCCCAGCTTaGTTCGGCAGGGGGACACAG +
Preference number: 3 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAPLLPA*FGRGTQ
Trigger: CTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR TCA 72 bp GGAAGATGTTCTCACGGGCACACAGCACAGATACCCTaGGAATGCCTCGGGTCATGGGCTGTCGCATGCATC +
Preference number: 3 (lower is better)
Translates to: GRCSHGHTAQIP*ECLGSWAVACI
Trigger: GATGCATGCGACAGCCCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CCA 72 bp CTCAGATACATTTACGACCCAGTCAGTGCAGCCTCGTaGGCACAGCTAATGAGCCAGGAAGACCAAGGAGCG +
Preference number: 3 (lower is better)
Translates to: LRYIYDPVSAAS*AQLMSQEDQGA
Trigger: CGCTCCTTGGTCTTCCTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAAATGTATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CAA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCACAGGCCCAGAGGATTaGCAGGAATATCCACGGGTT +
Preference number: 3 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFTGPED*QEYPRV
Trigger: AACCCGTGGATATTCCTGCAAATCCTCTGGGCCTGT...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 72 bp TATGACCCTGCAGGCAAGACAGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACACGTGTCAAGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: YDPAGKTEPSGR*GPSYQHVSRFC
Trigger: GCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCACCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: TEPQETASLKHWKKNCLAPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTAAAATTCACACAGTaGCCTGGGAGCAGATCCCAG +
Preference number: 3 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVKFTQ*PGSRSQ
Trigger: CTGGGATCTGCTCCCAGGCAACTGTGTGAATTTTAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR GCA 72 bp GTGTGGACATCTCAGATACATTTACGACCCAGTCAGTaGAGCCTCGTGGGCACAGCTAATGAGCCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: VWTSQIHLRPSQ*SLVGTANEPGR
Trigger: TCTTCCTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAAATGTATCTGAGATGTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CAA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCGTAAAATTCACACAGTaGCCTGGGAGCAGATCCCAG +
Preference number: 3 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPVKFTQ*PGSRSQ
Trigger: CTGGGATCTGCTCCCAGGCAACTGTGTGAATTTTAC...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR-3UTR CAA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGGCCTCAATAAATACTaGGGAAATGGGTCCAATGAG +
Preference number: 3 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRGLNKY*GNGSNE
Trigger: CTCATTGGACCCATTTCCCAAGTATTTATTGAGGCC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 72 bp GACACAGACAGTCCACTGAAGGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACTGCTTCCCTCAAACAT +
Preference number: 3 (lower is better)
Translates to: DTDSPLKEKISA*TEPQETASLKH
Trigger: ATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR TCA 72 bp CAGGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTaGAGATCAGGTACATCCACGAGACATAAGCTCTAC +
Preference number: 3 (lower is better)
Translates to: QAQRICRNIHGF*RSGTSTRHKLY
Trigger: GTAGAGCTTATGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CAA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCTAATAGTTGGTGTGTaGACAGTTGTTATAGTGCAA +
Preference number: 3 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPLIVGV*TVVIVQ
Trigger: TTGCACTATAACAACTGTCAACACACCAACTATTAG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CCA 72 bp CTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATaGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACA +
Preference number: 3 (lower is better)
Translates to: LRGQQLLPLFYS*MCLKHPEEFLT
Trigger: TGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR-3UTR CAA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGCTAATAGTTGGTGTGTaGACAGTTGTTATAGTGCAA +
Preference number: 3 (lower is better)
Translates to: SITEEQQQPRVDISDTFTLIVGV*TVVIVQ
Trigger: TTGCACTATAACAACTGTCAACACACCAACTATTAG...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR TCA 72 bp ATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTaGCATGTTTGTTACAGGGCCTCAATAAATACTTGG +
Preference number: 3 (lower is better)
Translates to: IHGCVSSTQKSS*HVCYRASINTW
Trigger: CCAAGTATTTATTGAGGCCCTGTAACAAACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTTCGTCAGGCAGGGGGATGGCACCGTGCTGGGGAGGAGGAAGCCCAGGCGCAAGCGGCTCCTGGCGGTaGTGGGTCTTCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TSSGRGMAPCWGGGSPGASGSWR*WVFWCR
Trigger: CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCT...TGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp ACTTCGTCAGGCAGGGGGATGGCACCGTGCTGGGGAGGAGGAAGCCCAGGCGCAGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: TSSGRGMAPCWGGGSPGAGSWRC*VFWCRL
Trigger: CAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCC...TGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp ACTTCGTCAGGCAGGGGGATGGCACCGTGCTGGGGAGGAGGAAGCCCAGGCGCAGTGTGGGCACGCCGGTaGACCGCCAGATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TSSGRGMAPCWGGGSPGAVWARR*TARLAF
Trigger: GAATGCCAATCTGGCGGTGCACCGGCGTGCCCACAC...TGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGAGCGGCTCCTGGCGGTaGTGGGTCTTCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITSGSWR*WVFWCR
Trigger: CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CCCAGCTGCCATCTCTTGGTCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCGTCTCTGGGATTCACTaGGGGGAGGCCAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: PSCHLLVSGIHCGEARTRVSGIH*GEARTR
Trigger: GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGAC...GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGCGTCAGGCAGGGGGATaGCACCGTGCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITRQAGG*HRAGEE
Trigger: CTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACG...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGGCCGCTCCCCTTTGCTaGACCGCTTCCCGCACACCT +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVAAPLC*TASRTP
Trigger: AGGTGTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGC...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATGCCGCTCCCCTTTGCTaGACCGCTTCCCGCACACCT +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHAAPLC*TASRTP
Trigger: AGGTGTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGC...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGGAAGCCCAGGCGCACTaGCTGCAGGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEEAQAH*LQGHQA
Trigger: AGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTC...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCGTGTGCGTCCTCCGGTaGACCTGCAGGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTVCVLR*TCRCCL
Trigger: CAGGCAGCACCTGCAGGTGCACCGGAGGACGCACAC...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGTGTGCGTCCTCCGGTaGACCTGCAGGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCVCVLR*TCRCCL
Trigger: CAGGCAGCACCTGCAGGTGCACCGGAGGACGCACAC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGTTGAGGATGCTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HCTSGSWRCWVFWCRLRMLQPSP*TPQGPA
Trigger: TGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAG...CATCCTCAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCTCAGGTCCTCCACCATaGCGGCCAGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTSGPPP*RPGPCH
Trigger: GTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGA...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCCCCAGCTGGATGCCTaGCTCCCAAGCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHPQLDA*LPSASA
Trigger: TGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTGGGG...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCCCCAGCTGGATGCCTaGCTCCCAAGCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCPQLDA*LPSASA
Trigger: TGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTGGGG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTCCCACCGCCTGGAGAGACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGCGTCAGGCAGGGGGATaGCACCGTGCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPPPGETLQSCGSTYSPKRQAGG*HRAGEE
Trigger: CTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACG...CTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCGGTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTGSWRC*VFWCRL
Trigger: CAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCC...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGGGTTCGCTGGTGCCTaGCGAGATTGGAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCGFAGA*RDWSSD
Trigger: GTCGGAGCTCCAATCTCGTCAGGCACCAGCGAACCC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCGCCGCTCCCCTTTGCTaGACCGCTTCCCGCACACCT +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGAAPLC*TASRTP
Trigger: AGGTGTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGC...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCAGGGGGATGGCACCGTaGTGGGGAGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGRGMAP*WGGGSP
Trigger: TGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCT...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGTGTGGCTGCGCTGGTaGACCTCCAGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCVWLRW*TSRWCL
Trigger: GAGACACCACCTGGAGGTGCACCAGCGCAGCCACAC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGGCCTGCCACCTGCTATaGTCACTGCACCAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVACHLL*SLHQRL
Trigger: GAGCCGCTGGTGCAGTGAGCATAGCAGGTGGCAGGC...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTTCGTCAGGCAGGGGGATGGCACCGTGCTGGGGAGGAGGAAGCCCAGGCGCAGGACCAGTGCTTTCCTaGAGCCATCACCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: TSSGRGMAPCWGGGSPGAGPVLS*SHHLAP
Trigger: GGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCC...TGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp CACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGTTGAGGATGAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HCTSGSWRCWVFWCRLRMRPGPA*RTGSAC
Trigger: GCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCT...CATCCTCAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGATCAGGTCCTCCACCATaGCGGCCAGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGSGPPP*RPGPCH
Trigger: GTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGA...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGCCCCAGCTGGATGCCTaGCTCCCAAGCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEPQLDA*LPSASA
Trigger: TGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTGGGG...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCCCAGCTGGATGCCTaGCTCCCAAGCGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGPQLDA*LPSASA
Trigger: TGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTGGGG...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGACGTCAGGCAGGGGGATaGCACCGTGCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGRQAGG*HRAGEE
Trigger: CTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACG...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGTGCACCAGCGGCTCCTaGCGGTGCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSECTSGS*RCWVFW
Trigger: CCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCA...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAGGGTTCGCTGGTGCCTaGCGAGATTGGAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGGFAGA*RDWSSD
Trigger: GTCGGAGCTCCAATCTCGTCAGGCACCAGCGAACCC...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGGGGTTCGCTGGTGCCTaGCGAGATTGGAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEGFAGA*RDWSSD
Trigger: GTCGGAGCTCCAATCTCGTCAGGCACCAGCGAACCC...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAGGTGCTGCCTGCGGCTaGAGCTCTTCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGGAACG*SSSSSP
Trigger: GGGACTGCTGGAAGAGCTTCAGCCGCAGGCAGCACC...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCGGATGGACCTCTGGTTaGAGCTTCGCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGGWTSG*SFARRQ
Trigger: CTGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCC...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGTCCTCCGGTGCACCTaGAGGTGCTGCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKVLRCT*RCCLRL
Trigger: CAGCCGCAGGCAGCACCTGCAGGTGCACCGGAGGAC...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGGTGTGGGCACGCCGGTaGACCGCCAGATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEVWARR*TARLAF
Trigger: GAATGCCAATCTGGCGGTGCACCGGCGTGCCCACAC...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGLQPSP*TPQGPA
Trigger: TGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAG...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTRPGPA*RTGSAC
Trigger: GCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCT...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGCGCCTGGAGAGACCCTaGAGTCCTGCGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITRLERP*SPAVPH
Trigger: ATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCG...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CCCAGCTGCCATCTCTTGGTCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCCGACGACAGAGCTCCTaGAGCTCCCTAAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PSCHLLVSGIHCGEARTRRRQSS*SSLRAS
Trigger: GGAAGCTCTTAGGGAGCTCCAGGAGCTCTGTCGTCG...GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGTCCCTGCCTGTGGCATaGAACCGCCTTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSESLPVA*NRLGLQ
Trigger: CTGGAGGCCAAGGCGGTTCCATGCCACAGGCAGGGA...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAAGGCTTGACCTCCACTaGCCCCAGCTGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGRLDLH*PQLDAW
Trigger: CCAGGCATCCAGCTGGGGCCAGTGGAGGTCAAGCCT...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTCCCACCGCCTGGAGAGACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGAGGCTTGACCTCCACTaGCCCCAGCTGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPPPGETLQSCGSTYSPKRLDLH*PQLDAW
Trigger: CCAGGCATCCAGCTGGGGCCAGTGGAGGTCAAGCCT...CTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCGGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCCACCGCCTTGCTCCTaGAAGGCCCGTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVPPPCS*KARVSS
Trigger: AGATGAGACACGGGCCTTCCAGGAGCAAGGCGGTGG...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262941.7
CDS-3UTR CCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAACGTCAGGCAGGGGGATaGCACCGTGCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKRQAGG*HRAGEE
Trigger: CTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACG...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGTTGCCTTTCCCGCGTTaGCGAATGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVLPFPR*RMGGKA
Trigger: CGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAA...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCTTGCCTTTCCCGCGTTaGCGAATGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTLPFPR*RMGGKA
Trigger: CGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAA...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGCTATGCTCACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGGGGCAGGAGTGGTCATaGGAAGATGTTCTCACGGGC +
Preference number: 4 (lower is better)
Translates to: CYAHCTSGSWRCWVFWCRGQEWS*EDVLTG
Trigger: GCCCGTGAGAACATCTTCCCATGACCACTCCTGCCC...CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGCCTGGGTCTGGACCTTaGACTCCTTCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWPGSGP*TPSPGG
Trigger: GCCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGG...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGTCATCTCCAGGGTCCTaGCTGAGCTGCTCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITSSPGS*LSCSSV
Trigger: TACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGA...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCTTCCCCAAACCTCTCTaGTGTCAGTGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTFPKPL*CQCHQR
Trigger: GCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAA...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITRSCGF*LRQAGG
Trigger: TCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGGTGGTGTCTCTGGCTaGAGGTTTTCCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCGGVSG*RFSSTR
Trigger: GCGAGTGCTGGAAAACCTTCAGCCAGAGACACCACC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGGGTGGTGTCTCTGGCTaGAGGTTTTCCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVGGVSG*RFSSTR
Trigger: GCGAGTGCTGGAAAACCTTCAGCCAGAGACACCACC...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGGTGCTGCCTGCGGCTaGAGCTCTTCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKGAACG*SSSSSP
Trigger: GGGACTGCTGGAAGAGCTTCAGCCGCAGGCAGCACC...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAGGATGGACCTCTGGTTaGAGCTTCGCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGGWTSG*SFARRQ
Trigger: CTGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCC...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGAAGCCCAGGCGCACTaGCTGCAGGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEEAQAH*LQGHQA
Trigger: AGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTC...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAAGGGGGATGGCACCGTaGTGGGGAGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKRGMAP*WGGGSP
Trigger: TGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCT...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGAGCGGCTCCTGGCGGTaGTGGGTCTTCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGSGSWR*WVFWCR
Trigger: CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCT...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAGTGCTGCCTGCCACCTaGTATGCTCACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGVLPAT*YAHCTS
Trigger: GCTGGTGCAGTGAGCATAGCAGGTGGCAGGCAGCAC...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVRRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITETLQS*GSTYSP
Trigger: TGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGTTACGACCCAGTCAGTaGAGCCTCGTGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVLRPSQ*SLVGTA
Trigger: AGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAA...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGTCCCTAAGAGCTTCCTaGGGTCCAGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSESLRAS*GPAASW
Trigger: CCAGGAGGCAGCTGGACCCCAGGAAGCTCTTAGGGA...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGTCAGGTCCTCCACCATaGCGGCCAGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWSGPPP*RPGPCH
Trigger: GTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGA...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGGGCATGGAACCGCCTTaGCCTCCAGTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVGMEPP*PPVLFL
Trigger: CAGAAAGAGCACTGGAGGCCAAGGCGGTTCCATGCC...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCTCGGTACCTGGGTCTaGACCTTGAACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCLGTWV*TLNSFP
Trigger: GGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCCTGCTCCTCGGTACCTaGGTCTGGACCTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTLLLGT*VWTLNS
Trigger: GGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAG...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGCTATGCTCACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGGGCCTCTTTCCCAGGTaGGTTCTCTGGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: CYAHCTSGSWRCWVFWCRGLFPR*VLWCFI
Trigger: GATGAAGCACCAGAGAACCCACCTGGGAAAGAGGCC...CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCCTGTATGGATTCTCTaGTGTCGGACCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCPVWIL*CRTSRS
Trigger: GGAGCGGCTGGTCCGACACCAGAGAATCCATACAGG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTCCCACCGCCTGGAGAGACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGCGGTGCTGGGTCTTCTaGTGCCGGTTGAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LPPPGETLQSCGSTYSPKRCWVF*CRLRMD
Trigger: GTCCATCCTCAACCGGCACCAGAAGACCCAGCACCG...CTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCTTGCCTTTCCCGCGTTaGCGAATGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGLPFPR*RMGGKA
Trigger: CGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAA...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCCATCTCTTGGTCTCTaGGATTCACTGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVPSLGL*DSLRGG
Trigger: GCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGG...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTGGAGCAGATCCCAGCTaGGGAGGGAAGATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLGADPS*GGKIQH
Trigger: GTGCTGGATCTTCCCTCCCCAGCTGGGATCTGCTCC...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGTCAGTGCAGCCTCGTaGGCACAGCTAATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCVSAAS*AQLMSQ
Trigger: CTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGAC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGATACCCAACTGCTGCTaGGGAGCTTCCGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITIPNCC*GASAIS
Trigger: AGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTAT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGACTGAGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCCCAGGGGTGGGGGAAGAGTCTaGGCTATGACCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTELLLGTWVWTLNSFPRGGGRV*AMTLQA
Trigger: TGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACC...CCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGGTCCTCCCTTCCTCTaGCCCATGGCAACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCGPPFL*PMATLS
Trigger: AGAAAGAGTTGCCATGGGGCAGAGGAAGGGAGGACC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAATCCTCCTGCTCTCCCTaGCTGTGGCATGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKSSCSP*LWHGTA
Trigger: GGCGGTTCCATGCCACAGGCAGGGAGAGCAGGAGGA...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACAGGGCCACCAGGCTCCTaGTCACAGACCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QSCGSTYSPKQSIWAGVTGPPGS*SQTLPS
Trigger: GCTCGGAAGGGTCTGTGAGCAGGAGCCTGGTGGCCC...TGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGAAGCCCAGGCGCACTaGCTGCAGGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFEAQAH*LQGHQA
Trigger: AGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGATCGTGGGTTCGCTGGTaGCTGACGAGATTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGSWVRW*LTRLEL
Trigger: GAGCTCCAATCTCGTCAGGCACCAGCGAACCCACGA...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTCCTCCGGTGCACCTaGAGGTGCTGCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVLRCT*RCCLRL
Trigger: CAGCCGCAGGCAGCACCTGCAGGTGCACCGGAGGAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGTCCTCCGGTGCACCTaGAGGTGCTGCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFVLRCT*RCCLRL
Trigger: CAGCCGCAGGCAGCACCTGCAGGTGCACCGGAGGAC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGACCTGCTATGCTCACTaGACCAGCGGCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWTCYAH*TSGSWR
Trigger: CCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCAGGT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGCCTGCCACCTGCTATaGTCACTGCACCAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKACHLL*SLHQRL
Trigger: GAGCCGCTGGTGCAGTGAGCATAGCAGGTGGCAGGC...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGCTGCAGCCATCACCTTaGACCCCGCAAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWLQPSP*TPQGPA
Trigger: TGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAG...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTGGACCAGTGCTTTCCTaGAGCCATCACCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLGPVLS*SHHLAP
Trigger: GGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCC...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSERRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCGGGGAGGCCAGGACCCGCCTGCAGAACAGGTAGTGCTTGCTCCTGGAAGGCCAGTAAAGAACCCAGCTaGCATCTCTTGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRPGPACRTGSACSWKASKEPS*HLLVSG
Trigger: CCCAGAGACCAAGAGATGGCAGCTGGGTTCTTTACT...GGCCTTCCAGGAGCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGCTCGGTACCTGGGTCTaGACCTTGAACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSELGTWV*TLNSFP
Trigger: GGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAG...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAGMAPC*GGGSPG
Trigger: GCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCTCTTCGTGGGTTCGCTaGTGCCTGACGAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCSSWVR*CLTRLE
Trigger: CTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGA...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCGGCCTCTTTCCCAGGTaGGTTCTCTGGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCGLFPR*VLWCFI
Trigger: GATGAAGCACCAGAGAACCCACCTGGGAAAGAGGCC...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATTTGAGGATGGACCTCTaGTTGAAGCTTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHLRMDL*LKLRPQ
Trigger: CTGCGGGCGAAGCTTCAACCAGAGGTCCATCCTCAA...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGCACCAGCGGCTCCTaGCGGTGCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGCTSGS*RCWVFW
Trigger: CCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCA...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHPKQSI*AGVTCL
Trigger: GAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGG...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAGGAGCAGATCCCAGCTaGGGAGGGAAGATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGGADPS*GGKIQH
Trigger: GTGCTGGATCTTCCCTCCCCAGCTGGGATCTGCTCC...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGATTCACACAGTTGCCTaGGAGCAGATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVIHTVA*EQIPAG
Trigger: CCCAGCTGGGATCTGCTCCCAGGCAACTGTGTGAAT...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
3UTR CAA 72 bp GGGCACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGGATGGCACCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GHWKGFQKELWV*TSSGRGMAPCW
Trigger: CCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTCCCCCATTCAGGCTTaGCCTCCACTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGSPIQA*PPLAPA
Trigger: AGCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGA...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGACTGAGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCCCAGGTCATCTCCAGGGTCCTaGCTGAGCTGCTCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: LTELLLGTWVWTLNSFPRSSPGS*LSCSSV
Trigger: TACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGA...CCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGCCGCTCCCCTTTGCTaGACCGCTTCCCGCACACCT +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAAAPLC*TASRTP
Trigger: AGGTGTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGATACCCAACTGCTGCTaGGGAGCTTCCGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEIPNCC*GASAIS
Trigger: AGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTAT...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGAATCTCAGCCTGAACTaGACCGCAGGAGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVNLSLN*TAGDCF
Trigger: GAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATT...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATGAAGAGTCTGAGCTATaGCCCTGCAGGCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHEESEL*PCRQDR
Trigger: TCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTC...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTGGTCCTCCCTTCCTCTaGCCCATGGCAACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLGPPFL*PMATLS
Trigger: AGAAAGAGTTGCCATGGGGCAGAGGAAGGGAGGACC...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGSASAK*CFLLLS
Trigger: GGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCT...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAGCTCCCAAGCGCCTCTaGAAAGTGCTGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGAPKRL*KVLFPP
Trigger: AGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGC...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGGGCCACCAGGCTCCTaGTCACAGACCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGGPPGS*SQTLPS
Trigger: GCTCGGAAGGGTCTGTGAGCAGGAGCCTGGTGGCCC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGTGTGGCTGCGCTGGTaGACCTCCAGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEVWLRW*TSRWCL
Trigger: GAGACACCACCTGGAGGTGCACCAGCGCAGCCACAC...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGTGTGCGTCCTCCGGTaGACCTGCAGGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGVCVLR*TCRCCL
Trigger: CAGGCAGCACCTGCAGGTGCACCGGAGGACGCACAC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGTGTGGGCACGCCGGTaGACCGCCAGATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYVWARR*TARLAF
Trigger: GAATGCCAATCTGGCGGTGCACCGGCGTGCCCACAC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTCTCTGGGATTCACTaGGGGGAGGCCAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVSGIH*GEARTR
Trigger: GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGATCATGGGCTGTCGCATaGATCCCCAACGCACAACCC +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGSWAVA*IPNAQP
Trigger: GGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGA...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGTCCCTAAGAGCTTCCTaGGGTCCAGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWSLRAS*GPAASW
Trigger: CCAGGAGGCAGCTGGACCCCAGGAAGCTCTTAGGGA...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTCCCTGCCTGTGGCATaGAACCGCCTTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGSLPVA*NRLGLQ
Trigger: CTGGAGGCCAAGGCGGTTCCATGCCACAGGCAGGGA...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGCTCTCCCTGCCTGTaGCATGGAACCGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGCSPCL*HGTALA
Trigger: GGCCAAGGCGGTTCCATGCCACAGGCAGGGAGAGCA...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGTGCTCTCCCTGCCTGTaGCATGGAACCGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRCSPCL*HGTALA
Trigger: GGCCAAGGCGGTTCCATGCCACAGGCAGGGAGAGCA...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAAGGCTTGACCTCCACTaGCCCCAGCTGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWERLDLH*PQLDAW
Trigger: CCAGGCATCCAGCTGGGGCCAGTGGAGGTCAAGCCT...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACAGGCTTGACCTCCACTaGCCCCAGCTGGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYRLDLH*PQLDAW
Trigger: CCAGGCATCCAGCTGGGGCCAGTGGAGGTCAAGCCT...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPGMAPC*GGGSPG
Trigger: GCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCC...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGATCTTCGTGGGTTCGCTaGTGCCTGACGAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGSSWVR*CLTRLE
Trigger: CTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGA...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGTTGAGGATGGACCTCTaGTTGAAGCTTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSELRMDL*LKLRPQ
Trigger: CTGCGGGCGAAGCTTCAACCAGAGGTCCATCCTCAA...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTGCACCAGCGGCTCCTaGCGGTGCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGCTSGS*RCWVFW
Trigger: CCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTCCAGCTGCCATCTCTTaGTCTCTGGGATTCACTGCG +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLPAAIS*SLGFTA
Trigger: CGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGG...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCAGCTGCCATCTCTTaGTCTCTGGGATTCACTGCG +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGPAAIS*SLGFTA
Trigger: CGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGG...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGGCCATATCTTTAAATaGCCCCAACCCCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITGHIFK*PQPLRS
Trigger: GGATCGCAGGGGTTGGGGCCATTTAAAGATATGGCC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGPKQSI*AGVTCL
Trigger: GAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGG...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACACTTGCTCCCACCGCCTaGAGAGACCCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSCGSTYSPKQSIWAGVTLAPTA*RDPAVL
Trigger: CAGGACTGCAGGGTCTCTCCAGGCGGTGGGAGCAAG...TGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACTCCCTGCCTGTGGCATaGAACCCACCGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYSLPVA*NPPPWP
Trigger: AGGCCAAGGCGGTGGGTTCCATGCCACAGGCAGGGA...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
3UTR CAA 72 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPA*ANGWEGDGTSA
Trigger: AGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCTCCCCCATTCAGGCTTaGCCTCCACTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFSPIQA*PPLAPA
Trigger: AGCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGA...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKRSCGF*LRQAGG
Trigger: TCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCT...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGGATGGACCTCTGGTTaGAGCTTCGCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGGWTSG*SFARRQ
Trigger: CTGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CCCAGCTGCCATCTCTTGGTCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCACACAGACAGTCCACTaGAGGAGAAAATCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSCHLLVSGIHCGEARTRTQTVH*RRKSQP
Trigger: AGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGT...GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTCCTCCTGCTCTCCCTaGCTGTGGCATGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPASSCSP*LWHGTA
Trigger: GGCGGTTCCATGCCACAGGCAGGGAGAGCAGGAGGA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGCTCCCACCGCCTTaGTCCTGGAAGGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPALLPPP*SWKARV
Trigger: GACACGGGCCTTCCAGGAGCAAGGCGGTGGGAGCAA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262941.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGGGCCACCAGGCTCCTaGTCACAGACCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRGPPGS*SQTLPS
Trigger: GCTCGGAAGGGTCTGTGAGCAGGAGCCTGGTGGCCC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGAGGGGGATGGCACCGTaGTGGGGAGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRRGMAP*WGGGSP
Trigger: TGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCT...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGTGTGGCTGCGCTGGTaGACCTCCAGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGVWLRW*TSRWCL
Trigger: GAGACACCACCTGGAGGTGCACCAGCGCAGCCACAC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTGTGGGCACGCCGGTaGACCGCCAGATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVWARR*TARLAF
Trigger: GAATGCCAATCTGGCGGTGCACCGGCGTGCCCACAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTACCTGCTATGCTCACTaGACCAGCGGCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGTCYAH*TSGSWR
Trigger: CCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCAGGT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGCCTGCCACCTGCTATaGTCACTGCACCAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFACHLL*SLHQRL
Trigger: GAGCCGCTGGTGCAGTGAGCATAGCAGGTGGCAGGC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGGACCAGTGCTTTCCTaGAGCCATCACCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKGPVLS*SHHLAP
Trigger: GGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCC...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CATCATCCCCAGTGGGTGTCCAGGACCCCTAGTGCCTTGGATGACAAGGGTCTGAGGCGATGGGACCAGTaGTTTCCTGCAGCCATCACC +
Preference number: 4 (lower is better)
Translates to: HHPQWVSRTPSALDDKGLRRWDQ*FPAAIT
Trigger: GGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCT...CAGACCCTTGTCATCCAAGGCACTAGGGGTCCTGGACACCCACTGGGGATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHGMAPC*GGGSPG
Trigger: GCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCC...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCTTCCAGAAGGAGCTGTaGGTTTTGACTTCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: KPGLAFPALANGWEGDGTFQKEL*VLTSSG
Trigger: GCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAA...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCCCAGGTGGGTTCTCTaGTGCTTCATCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCPRWVL*CFIRYS
Trigger: AGAATACCTGATGAAGCACCAGAGAACCCACCTGGG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACTTGCCTTTCCCGCGTTaGCGAATGGGTGGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYLPFPR*RMGGKA
Trigger: CGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAA...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAGGTAGTGCTTGCTCCTaGAAGGCCCGTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGGSACS*KARVSS
Trigger: AGATGAGACACGGGCCTTCCAGGAGCAAGCACTACC...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTCTTGCTCCCACCGCCTaGAGAGACCCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGLAPTA*RDPAVL
Trigger: CAGGACTGCAGGGTCTCTCCAGGCGGTGGGAGCAAG...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGGAATGCCTCGGGTCATaGGCTGTCGCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRECLGS*AVACIP
Trigger: GGGGATGCATGCGACAGCCCATGACCCGAGGCATTC...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGAATGCCTCGGGTCATaGGCTGTCGCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYECLGS*AVACIP
Trigger: GGGGATGCATGCGACAGCCCATGACCCGAGGCATTC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGGGAGCAGATCCCAGCTaGGGAGGGAAGATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRGADPS*GGKIQH
Trigger: GTGCTGGATCTTCCCTCCCCAGCTGGGATCTGCTCC...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGACCCACTGAGTCTGCCTaGCTGTCAGCCCTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRPTESA*LSALPS
Trigger: GCTAGGCAGGGCTGACAGCCAGGCAGACTCAGTGGG...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACATGCTCTCCCTGCCTGTaGCATGGAACCCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: QSCGSTYSPKQSIWAGVTCSPCL*HGTHRL
Trigger: AAGGCGGTGGGTTCCATGCCACAGGCAGGGAGAGCA...TGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAATCATCTCCAGGGTCCTaGCTGAGCTGCTCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWESSPGS*LSCSSV
Trigger: TACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGA...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACTTCCCCAAACCTCTCTaGTGTCAGTGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYFPKPL*CQCHQR
Trigger: GCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAA...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGGGTGGTGTCTCTGGCTaGAGGTTTTCCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGGGVSG*RFSSTR
Trigger: GCGAGTGCTGGAAAACCTTCAGCCAGAGACACCACC...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEEKISA*TEPQET
Trigger: AGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTC...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGGTGGGGGAAGAGTCTaGGCTATGACCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRGGGRV*AMTLQA
Trigger: TGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGCGCCTTGGCCTCCAGTaGTCTTTCTGTCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGRLGLQ*SFCQVL
Trigger: GAGGACCTGACAGAAAGAGCACTGGAGGCCAAGGCG...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTTGACTTCGTCAGGCAGGGGGTCGTGGGTTCGCTGGTaGCTGACGAGATTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HWKGFQKELWVLTSSGRGSWVRW*LTRLEL
Trigger: GAGCTCCAATCTCGTCAGGCACCAGCGAACCCACGA...CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGTGCTGCCTGCCACCTaGTATGCTCACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRVLPAT*YAHCTS
Trigger: GCTGGTGCAGTGAGCATAGCAGGTGGCAGGCAGCAC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGGACCAGTGCTTTCCTaGAGCCATCACCTTGCACCC +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYGPVLS*SHHLAP
Trigger: GGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGRPGPA*RTGSAC
Trigger: GCAAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTCCTTCCTCTGCCCCATaGCAACTCTTTCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLPSSAP*QLFLQF
Trigger: AAACTGGAGAAAGAGTTGCCATGGGGCAGAGGAAGG...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACATGCCTCCACTCTCCCTAAGAGCTTCCTaGGGTCCAGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FHILPKAVYLGWGHMPPLSLRAS*GPAASW
Trigger: CCAGGAGGCAGCTGGACCCCAGGAAGCTCTTAGGGA...GAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTCCCTAAGAGCTTCCTaGGGTCCAGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGSLRAS*GPAASW
Trigger: CCAGGAGGCAGCTGGACCCCAGGAAGCTCTTAGGGA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACTCAGGTCCTCCACCATaGCGGCCAGGGCCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHSGPPP*RPGPCH
Trigger: GTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGA...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGTCCCTGCCTGTGGCATaGAACCGCCTTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRSLPVA*NRLGLQ
Trigger: CTGGAGGCCAAGGCGGTTCCATGCCACAGGCAGGGA...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAACTCGGTACCTGGGTCTaGACCTTGAACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWELGTWV*TLNSFP
Trigger: GGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAG...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACACTGCTCCTCGGTACCTaGGTCTGGACCTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QSCGSTYSPKQSIWAGVTLLLGT*VWTLNS
Trigger: GGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAG...TGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGCCCAGGTGGGTTCTCTaGTGCTTCATCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEPRWVL*CFIRYS
Trigger: AGAATACCTGATGAAGCACCAGAGAACCCACCTGGG...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGCCTGTATGGATTCTCTaGTGTCGGACCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGPVWIL*CRTSRS
Trigger: GGAGCGGCTGGTCCGACACCAGAGAATCCATACAGG...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGTTGAGGATGGACCTCTaGTTGAAGCTTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWLRMDL*LKLRPQ
Trigger: CTGCGGGCGAAGCTTCAACCAGAGGTCCATCCTCAA...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTCGGTGCTGGGTCTTCTaGTGCCGGTTGAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGRCWVF*CRLRMD
Trigger: GTCCATCCTCAACCGGCACCAGAAGACCCAGCACCG...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGCGGTGCTGGGTCTTCTaGTGCCGGTTGAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPARCWVF*CRLRMD
Trigger: GTCCATCCTCAACCGGCACCAGAAGACCCAGCACCG...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEGSWRC*VFWCRL
Trigger: CAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCC...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGWVGRR*DQCFPA
Trigger: TGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCA...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGCGTTGGCGAATGGGTaGGAAGGCGATGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGALANG*EGDGTS
Trigger: ACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCATCTCTTGGTCTCTaGGATTCACTGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYPSLGL*DSLRGG
Trigger: GCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGG...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGATTCACACAGTTGCCTaGGAGCAGATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWIHTVA*EQIPAG
Trigger: CCCAGCTGGGATCTGCTCCCAGGCAACTGTGTGAAT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAATGGAAAACCACCCTCTaGGGAAGGCCACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEWKTTL*GRPHSG
Trigger: GCCTGAGTGTGGCCTTCCCCAGAGGGTGGTTTTCCA...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAATCCCCCATTCAGGCTTaGCCTCCACTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTESPIQA*PPLAPA
Trigger: AGCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGA...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTTCATCTCCAGGGTCCTaGCTGAGCTGCTCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGSSPGS*LSCSSV
Trigger: TACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGA...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTTCCCCAAACCTCTCTaGTGTCAGTGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGFPKPL*CQCHQR
Trigger: GCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGRSCGF*LRQAGG
Trigger: TCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGAATCTCAGCCTGAACTaGACCGCAGGAGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWNLSLN*TAGDCF
Trigger: GAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTACACAGACAGTCCACTaGAGGAGAAAATCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLTQTVH*RRKSQP
Trigger: AGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGT...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACATGCCTCCACTCGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 4 (lower is better)
Translates to: FHILPKAVYLGWGHMPPLEPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...GAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGEPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATGTAACAAGAGGTAGGTaGCAAATGCATTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHVTRGR*QMHFRA
Trigger: TGCCCTGAAATGCATTTGTCACCTACCTCTTGTTAC...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGGTAACAAGAGGTAGGTaGCAAATGCATTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVVTRGR*QMHFRA
Trigger: TGCCCTGAAATGCATTTGTCACCTACCTCTTGTTAC...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGGGTCCTCCCTTCCTCTaGCCCATGGCAACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGGPPFL*PMATLS
Trigger: AGAAAGAGTTGCCATGGGGCAGAGGAAGGGAGGACC...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CACTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTTGACTTCGTCAGGCAGGGGGAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HWKGFQKELWVLTSSGRGSASAK*CFLLLS
Trigger: GGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCT...CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACGCTCCCAAGCGCCTCTaGAAAGTGCTGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYAPKRL*KVLFPP
Trigger: AGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGC...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGGCTCCCAAGCGCCTCTaGAAAGTGCTGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRAPKRL*KVLFPP
Trigger: AGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGC...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGTCCTCCGGTGCACCTaGAGGTGCTGCCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETVLRCT*RCCLRL
Trigger: CAGCCGCAGGCAGCACCTGCAGGTGCACCGGAGGAC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTGCTGGGTCTTCTGGTaGCGGTTGAGGATGGACCTC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGCWVFW*RLRMDL
Trigger: GAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCACCTGCTATGCTCACTaGACCAGCGGCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPTCYAH*TSGSWR
Trigger: CCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCAGGT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATTCCGCCATCTCTGGATaGTCTTTAAGCATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHSAISG*SLSIFR
Trigger: TCTGAAGATGCTTAAAGAGCATCCAGAGATGGCGGA...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAATTGCCTCCTTTTCCTTaGTCCCACCGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWELPPFP*SHRLER
Trigger: TCTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAA...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTCATGGGCTGTCGCATaGATCCCCAACGCACAACCC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPASWAVA*IPNAQP
Trigger: GGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGCTCGGTACCTGGGTCTaGACCTTGAACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPALGTWV*TLNSFP
Trigger: GGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAG...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTCTGCTCCTCGGTACCTaGGTCTGGACCTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGLLLGT*VWTLNS
Trigger: GGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAG...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGGGCCTCTTTCCCAGGTaGGTTCTCTGGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRGLFPR*VLWCFI
Trigger: GATGAAGCACCAGAGAACCCACCTGGGAAAGAGGCC...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGWVGRR*DQCFPA
Trigger: TGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTCACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGTTGTTTAGCACCACTTaGGTAAGAGATGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVLFSTT*VRDGSS
Trigger: GCTGCTTCCATCTCTTACCCAAGTGGTGCTAAACAA...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGTCAGTGCAGCCTCGTaGGCACAGCTAATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGVSAAS*AQLMSQ
Trigger: CTGGCTCATTAGCTGTGCCCACGAGGCTGCACTGAC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTTGGAAAACCACCCTCTaGGGAAGGCCACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGWKTTL*GRPHSG
Trigger: GCCTGAGTGTGGCCTTCCCCAGAGGGTGGTTTTCCA...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTCCCCAAACCTCTCTaGTGTCAGTGCCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPFPKPL*CQCHQR
Trigger: GCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAA...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGTGCTGCCTGCGGCTaGAGCTCTTCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGAACG*SSSSSP
Trigger: GGGACTGCTGGAAGAGCTTCAGCCGCAGGCAGCACC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAGGTGCTGCCTGCGGCTaGAGCTCTTCCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKGAACG*SSSSSP
Trigger: GGGACTGCTGGAAGAGCTTCAGCCGCAGGCAGCACC...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGGGGAAATGGGTCCAATaGGAATGGGGTGAAATTAAT +
Preference number: 4 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITGKWVQ*EWGEIN
Trigger: ATTAATTTCACCCCATTCTCATTGGACCCATTTCCC...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGATCAATGACCCCTCCTaGAACTCATATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSEINDPS*NSYAGT
Trigger: TGTACCAGCATATGAGTTTCAGGAGGGGTCATTGAT...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAATCAATGACCCCTCCTaGAACTCATATGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGINDPS*NSYAGT
Trigger: TGTACCAGCATATGAGTTTCAGGAGGGGTCATTGAT...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGGTCCTCCCTTCCTCTaGCCCATGGCAACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGGPPFL*PMATLS
Trigger: AGAAAGAGTTGCCATGGGGCAGAGGAAGGGAGGACC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGSASAK*CFLLLS
Trigger: GGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGSASAK*CFLLLS
Trigger: GGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCT...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGCTCCCAAGCGCCTCTaGAAAGTGCTGTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRAPKRL*KVLFPP
Trigger: AGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAAGGGGGATGGCACCGTaGTGGGGAGGAGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETRGMAP*WGGGSP
Trigger: TGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCT...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTGCTGGGTCTTCTGGTaGCGGTTGAGGATGGACCTC +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPCWVFW*RLRMDL
Trigger: GAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCA...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTTCCGCCATCTCTGGATaGTCTTTAAGCATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLSAISG*SLSIFR
Trigger: TCTGAAGATGCTTAAAGAGCATCCAGAGATGGCGGA...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRETLQS*GSTYSP
Trigger: TGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAACGCCTGGAGAGACCCTaGAGTCCTGCGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTERLERP*SPAVPH
Trigger: ATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCG...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGCCTCCTTTTCCTTaGTCCCACCGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPALPPFP*SHRLER
Trigger: TCTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAA...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGTCATGGGCTGTCGCATaGATCCCCAACGCACAACCC +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRSWAVA*IPNAQP
Trigger: GGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGA...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCTGAAGCTTAAGATATaGCAACTTGCTGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCLKLKI*QLAETQ
Trigger: CTGGGTTTCAGCAAGTTGGCATATCTTAAGCTTCAG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTCAGCCGAAAAGTCTCTaGACTAGGGTCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGQPKSL*TRVLPS
Trigger: GGAAGGGAGGACCCTAGTCCAGAGACTTTTCGGCTG...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCGACGACAGAGCTCCTaGAGCTCCCTAAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPRRQSS*SSLRAS
Trigger: GGAAGCTCTTAGGGAGCTCCAGGAGCTCTGTCGTCG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCTGCTCCTCGGTACCTaGGTCTGGACCTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPLLLGT*VWTLNS
Trigger: GGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCTCTTCGTGGGTTCGCTaGTGCCTGACGAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFSSWVR*CLTRLE
Trigger: CTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGA...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTTCTTCGTGGGTTCGCTaGTGCCTGACGAGATTGGAG +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGSSWVR*CLTRLE
Trigger: CTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGA...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAACCCAGGTGGGTTCTCTaGTGCTTCATCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: QCFPAAITLHPARPCSEKPRWVL*CFIRYS
Trigger: AGAATACCTGATGAAGCACCAGAGAACCCACCTGGG...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGGCCTCTTTCCCAGGTaGGTTCTCTGGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGGLFPR*VLWCFI
Trigger: GATGAAGCACCAGAGAACCCACCTGGGAAAGAGGCC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGCCTGTATGGATTCTCTaGTGTCGGACCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRPVWIL*CRTSRS
Trigger: GGAGCGGCTGGTCCGACACCAGAGAATCCATACAGG...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGCTCCTGGCGGTGCTaGGTCTTCTGGTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGSWRC*VFWCRL
Trigger: CAACCGGCACCAGAAGACCCAGCACCGCCAGGAGCC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGGTAGTGCTTGCTCCTaGAAGGCCCGTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGGSACS*KARVSS
Trigger: AGATGAGACACGGGCCTTCCAGGAGCAAGCACTACC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTCCAGCTGCCATCTCTTaGTCTCTGGGATTCACTGCG +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGPAAIS*SLGFTA
Trigger: CGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGG...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGCAGGAGGGCAGGAGTaGTCATGGGAAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGAGGQE*SWEDVL
Trigger: GAGAACATCTTCCCATGACCACTCCTGCCCTCCTGC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGGAAAGGCTTCCAGAAGGAGCTGTGGGTTTTGACTTCGTCAGGCAGGGGGATATTCACACAGTTGCCTaGGAGCAGATCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LERLPEGAVGFDFVRQGDIHTVA*EQIPAG
Trigger: CCCAGCTGGGATCTGCTCCCAGGCAACTGTGTGAAT...ATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCCCCTATTTTATTCATaGATGTGTCTCAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHPLFYS*MCLKHP
Trigger: TGGGTGCTTGAGACACATCCATGAATAAAATAGGGG...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGGACCCCTAGTGCCTTaGATGACAAGGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRGPLVP*MTRVWR
Trigger: CCTCCAGACCCTTGTCATCCAAGGCACTAGGGGTCC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGCTCATCATCCCCAGTaGGTGTCCAGGACCCCTAGT +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRAHHPQ*VSRTPS
Trigger: ACTAGGGGTCCTGGACACCCACTGGGGATGATGAGC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAAACCCAGAGGAATGCTaGCTGTGTATGACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGNPEEC*LCMTKE
Trigger: CTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTT...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCTTAGATCAGGGTGGTaGCAAAGAGTCAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: RWDQCFPAAITLHPARPCLRSGW*QRVRQN
Trigger: ATTTTGTCTGACTCTTTGCCACCACCCTGATCTAAG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTGGAACCCACCGCCTTaGCCTCCAGTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPWNPPP*PPVLFL
Trigger: CAGAAAGAGCACTGGAGGCCAAGGCGGTGGGTTCCA...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR TCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAATCCCCCATTCAGGCTTaGCCTCCACTGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKSPIQA*PPLAPA
Trigger: AGCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGA...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAATCTCAGCCTGAACTaGACCGCAGGAGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGNLSLN*TAGDCF
Trigger: GAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGATT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCGAAGAGTCTGAGCTATaGCCCTGCAGGCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFEESEL*PCRQDR
Trigger: TCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTC...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTACAGCACAGATACCCTaGGAATGCCTCGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPTAQIP*ECLGSW
Trigger: CCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGT...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTGGGAAATGGGTCCAATaGGAATGGGGTGAAATTAAT +
Preference number: 4 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLGKWVQ*EWGEIN
Trigger: ATTAATTTCACCCCATTCTCATTGGACCCATTTCCC...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGCGTTTCAAAGTGGGCTaGGTAATACAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: DQCFPAAITLHPARPCSERFKVG*VIQLCV
Trigger: AACACAAAGCTGTATTACTCAGCCCACTTTGAAACG...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAATCCTCCTGCTCTCCCTaGCTGTGGCATGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKSSCSP*LWHGTA
Trigger: GGCGGTTCCATGCCACAGGCAGGGAGAGCAGGAGGA...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAAGCGGCTCCTGGCGGTaGTGGGTCTTCTGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSSGSWR*WVFWCR
Trigger: CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCT...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAACCTGCTATGCTCACTaGACCAGCGGCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETTCYAH*TSGSWR
Trigger: CCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCAGGT...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGAGTAAAGAACCCAGCTaGCATCTCTTGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGSKEPS*HLLVSG
Trigger: CCCAGAGACCAAGAGATGGCAGCTGGGTTCTTTACT...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCTTACGACCCAGTCAGTaGAGCCTCGTGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPLRPSQ*SLVGTA
Trigger: AGCTGTGCCCACGAGGCTGCACTGACTGGGTCGTAA...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCTCAGCCCTGCCTAGCTaGTCTGATAATTACGGGGGA +
Preference number: 4 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFSALPS*SDNYGG
Trigger: TCCCCCGTAATTATCAGAGCAGCTAGGCAGGGCTGA...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCGACGACAGAGCTCCTaGAGCTCCCTAAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPRRQSS*SSLRAS
Trigger: GGAAGCTCTTAGGGAGCTCCAGGAGCTCTGTCGTCG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAATTCCAGAAGGAGCTGTaGGTTTTGACTTCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEFQKEL*VLTSSG
Trigger: GCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAA...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAACCCAGGTGGGTTCTCTaGTGCTTCATCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEPRWVL*CFIRYS
Trigger: AGAATACCTGATGAAGCACCAGAGAACCCACCTGGG...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCTGGGTGGGAAGGCGATaGGACCAGTGCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPWVGRR*DQCFPA
Trigger: TGCAGGAAAGCACTGGTCCCATCGCCTTCCCACCCA...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGACTGAGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCCCAGGTTGTTTAGCACCACTTaGGTAAGAGATGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTELLLGTWVWTLNSFPRLFSTT*VRDGSS
Trigger: GCTGCTTCCATCTCTTACCCAAGTGGTGCTAAACAA...CCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGGCCATATCTTTAAATaGCCCCAACCCCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAGHIFK*PQPLRS
Trigger: GGATCGCAGGGGTTGGGGCCATTTAAAGATATGGCC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAGGCCATATCTTTAAATaGCCCCAACCCCTGCGATCC +
Preference number: 4 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRGHIFK*PQPLRS
Trigger: GGATCGCAGGGGTTGGGGCCATTTAAAGATATGGCC...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCGGACCCCTAGTGCCTTaGATGACAAGGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPGPLVP*MTRVWR
Trigger: CCTCCAGACCCTTGTCATCCAAGGCACTAGGGGTCC...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCTTAGATCAGGGTGGTaGCAAAGAGTCAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGLRSGW*QRVRQN
Trigger: ATTTTGTCTGACTCTTTGCCACCACCCTGATCTAAG...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGAGGAGCTGTGGGTTTTaGCTTCGTCAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTRSCGF*LRQAGG
Trigger: TCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCT...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAATACCCAACTGCTGCTaGGGAGCTTCCGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEIPNCC*GASAIS
Trigger: AGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTAT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGEKISA*TEPQET
Trigger: AGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTC...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGGAAGAGTCTGAGCTATaGCCCTGCAGGCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKREESEL*PCRQDR
Trigger: TCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTC...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAACAGCACAGATACCCTaGGAATGCCTCGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTETAQIP*ECLGSW
Trigger: CCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGGGCCACCAGGCTCCTaGTCACAGACCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSGPPGS*SQTLPS
Trigger: GCTCGGAAGGGTCTGTGAGCAGGAGCCTGGTGGCCC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGAAGCCCAGGCGCACTaGCTGCAGGGCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAEAQAH*LQGHQA
Trigger: AGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGTGTGCGTCCTCCGGTaGACCTGCAGGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSVCVLR*TCRCCL
Trigger: CAGGCAGCACCTGCAGGTGCACCGGAGGACGCACAC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGTGCTGCCTGCCACCTaGTATGCTCACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETVLPAT*YAHCTS
Trigger: GCTGGTGCAGTGAGCATAGCAGGTGGCAGGCAGCAC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LEALSKPGLAFPALANGWRWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGTCTCTGGGATTCACTaGGGGGAGGCCAGGACCCGC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSVSGIH*GEARTR
Trigger: GCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGAC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAACGCCTGGAGAGACCCTaGAGTCCTGCGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKRLERP*SPAVPH
Trigger: ATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGCG...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGTCAGCCCTGCCTAGCTaGTCTGATAATTACGGGGGA +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRSALPS*SDNYGG
Trigger: TCCCCCGTAATTATCAGAGCAGCTAGGCAGGGCTGA...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCCTGGCTGTCAGCCCTaGCTAGCTGCTCTGATAATT +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPPGCQP*LAALII
Trigger: AATTATCAGAGCAGCTAGGCAGGGCTGACAGCCAGG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGGGATGGCACCGTGCTaGGGAGGAGGAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAGMAPC*GGGSPG
Trigger: GCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGCCTGTATGGATTCTCTaGTGTCGGACCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTPVWIL*CRTSRS
Trigger: GGAGCGGCTGGTCCGACACCAGAGAATCCATACAGG...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGCCATCTCTTGGTCTCTaGGATTCACTGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTPSLGL*DSLRGG
Trigger: GCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGG...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAGCAGGAGGGCAGGAGTaGTCATGGGAAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEAGGQE*SWEDVL
Trigger: GAGAACATCTTCCCATGACCACTCCTGCCCTCCTGC...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAGCCTCAATAAATACTTaGGAAATGGGTCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGASINT*EMGPMR
Trigger: TCTCATTGGACCCATTTCCCAAGTATTTATTGAGGC...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGAGCAGCAGCCCCGTGTaGACATCTCAGATACATTTA +
Preference number: 4 (lower is better)
Translates to: SLEALSKPGLAFPALANGSSSPV*TSQIHL
Trigger: TAAATGTATCTGAGATGTCCACACGGGGCTGCTGCT...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACTGAAACTCATATGCTaGTACAGCAGACAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGLKLIC*YSRQKK
Trigger: CTTTTTCTGTCTGCTGTACCAGCATATGAGTTTCAG...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
3UTR CAA 72 bp AAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KMRSQLPTRVKV*PLLPALFGRGT
Trigger: TGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGTGGTGTCTCTGGCTaGAGGTTTTCCAGCACTCGC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGGVSG*RFSSTR
Trigger: GCGAGTGCTGGAAAACCTTCAGCCAGAGACACCACC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGGGTGGGGGAAGAGTCTaGGCTATGACCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQGGGRV*AMTLQA
Trigger: TGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACC...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACAAAGGCACAGCACAATaGCACAGCAGTCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHKGTAQ*HSSQST
Trigger: CGTGGACTGACTGCTGTGTCATTGTGCTGTGCCTTT...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACATCGTGGGTTCGCTGGTaGCTGACGAGATTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETSWVRW*LTRLEL
Trigger: GAGCTCCAATCTCGTCAGGCACCAGCGAACCCACGA...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAATGCTGGGTCTTCTGGTaGCGGTTGAGGATGGACCTC +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKCWVFW*RLRMDL
Trigger: GAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCA...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTGCCTGCCACCTGCTATaGTCACTGCACCAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCACHLL*SLHQRL
Trigger: GAGCCGCTGGTGCAGTGAGCATAGCAGGTGGCAGGC...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAATCCGCCATCTCTGGATaGTCTTTAAGCATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWESAISG*SLSIFR
Trigger: TCTGAAGATGCTTAAAGAGCATCCAGAGATGGCGGA...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCAATGGCCCCAACCCCTaGGATCCAGCAGTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPNGPNP*DPAVKN
Trigger: GTTCTTTACTGCTGGATCGCAGGGGTTGGGGCCATT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAAATGGCCCCAACCCCTaGGATCCAGCAGTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTENGPNP*DPAVKN
Trigger: GTTCTTTACTGCTGGATCGCAGGGGTTGGGGCCATT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGCACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGAGGTAGGTGACAAATaGATTTCAGGGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEEVGDK*ISGQDA
Trigger: AGCATCTTGCCCTGAAATGCATTTGTCACCTACCTC...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGCATGGAACCGCCTTaGCCTCCAGTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGMEPP*PPVLFL
Trigger: CAGAAAGAGCACTGGAGGCCAAGGCGGTTCCATGCC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGCGGTGCTGGGTCTTCTaGTGCCGGTTGAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQRCWVF*CRLRMD
Trigger: GTCCATCCTCAACCGGCACCAGAAGACCCAGCACCG...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCATGCACCAGCGGCTCCTaGCGGTGCTGGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLACTSGS*RCWVFW
Trigger: CCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCA...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGCACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGGCAGGAGTGGTCATaGGAAGATGTTCTCACGGGC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGQEWS*EDVLTG
Trigger: GCCCGTGAGAACATCTTCCCATGACCACTCCTGCCC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAACAGCACAGATACCCTaGGAATGCCTCGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKTAQIP*ECLGSW
Trigger: CCATGACCCGAGGCATTCTCAGGGTATCTGTGCTGT...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGTGTGGCTGCGCTGGTaGACCTCCAGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAVWLRW*TSRWCL
Trigger: GAGACACCACCTGGAGGTGCACCAGCGCAGCCACAC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: WEDVLTGTQHRYPENASGRWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGAGACTGAGAATGACTaGATCAATGACCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWEETEND*INDPFE
Trigger: CTCAAAAGGGTCATTGATGCAGTCATTCTCAGTCTC...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334715.7
CDS-3UTR GCA 90 bp GGAGGGCAGGAGTGGTCATGGGAAGATGTTCTCACGGGCACACAGCACAGATACCTCCTGAAACTCATATaGTGGTACAGCAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: GGQEWSWEDVLTGTQHRYLLKLI*WYSRQK
Trigger: TTTCTGTCTGCTGTACCAGCATATGAGTTTCAGGAG...GTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCATGACCACTCCTGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCCTTCCTCTGCCCCATaGCAACTCTTTCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPPSSAP*QLFLQF
Trigger: AAACTGGAGAAAGAGTTGCCATGGGGCAGAGGAAGG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAGGTAGTGCTTGCTCCTaGAAGGCCCGTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETGSACS*KARVSS
Trigger: AGATGAGACACGGGCCTTCCAGGAGCAAGCACTACC...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAACCAAAGCAGTCTATCTaGGCTGGGGTCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKPKQSI*AGVTCL
Trigger: GAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGG...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGCTTGCTCCCACCGCCTaGAGAGACCCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGLAPTA*RDPAVL
Trigger: CAGGACTGCAGGGTCTCTCCAGGCGGTGGGAGCAAG...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGAATGCCTCGGGTCATaGGCTGTCGCATGCATCCCC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSECLGS*AVACIP
Trigger: GGGGATGCATGCGACAGCCCATGACCCGAGGCATTC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGCCCACTGAGTCTGCCTaGCTGTCAGCCCTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGPTESA*LSALPS
Trigger: GCTAGGCAGGGCTGACAGCCAGGCAGACTCAGTGGG...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCACACAGACAGTCCACTaGAGGAGAAAATCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPTQTVH*RRKSQP
Trigger: AGGCTGAGATTTTCTCCTTCAGTGGACTGTCTGTGT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCATCGTGGGTTCGCTGGTaGCTGACGAGATTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSSWVRW*LTRLEL
Trigger: GAGCTCCAATCTCGTCAGGCACCAGCGAACCCACGA...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCATGCTGGGTCTTCTGGTaGCGGTTGAGGATGGACCTC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSCWVFW*RLRMDL
Trigger: GAGGTCCATCCTCAACCGGCACCAGAAGACCCAGCA...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGTTGCCTCCTTTTCCTTaGTCCCACCGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQLPPFP*SHRLER
Trigger: TCTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAA...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCACGTGTCAAGGTTTTaGCTTTACTCCCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPHVSRF*LYSQLC
Trigger: ACAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGTTCCAGAAGGAGCTGTaGGTTTTGACTTCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTFQKEL*VLTSSG
Trigger: GCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAA...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAACACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTEHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTGCTCATCATCCCCAGTaGGTGTCCAGGACCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCAHHPQ*VSRTPS
Trigger: ACTAGGGGTCCTGGACACCCACTGGGGATGATGAGC...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAACTGAAACTCATATGCTaGTACAGCAGACAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: EALSKPGLAFPALANGWELKLIC*YSRQKK
Trigger: CTTTTTCTGTCTGCTGTACCAGCATATGAGTTTCAG...TTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394150.5
ENST00000394152.7
CDS-3UTR TCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGGAGCCCTCAGGAAGATaGGGTCCCAGCTACCAACAC +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGEPSGR*GPSYQH
Trigger: GTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTC...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGAATATCCACGGGTTCTaGAGATCAGGTACATCCACG +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTNIHGF*RSGTST
Trigger: CGTGGATGTACCTGATCTTCAGAACCCGTGGATATT...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGAAAGGCACAGCACAATaGCACAGCAGTCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQKGTAQ*HSSQST
Trigger: CGTGGACTGACTGCTGTGTCATTGTGCTGTGCCTTT...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAETLQS*GSTYSP
Trigger: TGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGCTCCTGAAACTCATATaGTGGTACAGCAGACAGAAA +
Preference number: 4 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRLLKLI*WYSRQK
Trigger: TTTCTGTCTGCTGTACCAGCATATGAGTTTCAGGAG...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAACCTTCCTCTGCCCCATaGCAACTCTTTCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKPSSAP*QLFLQF
Trigger: AAACTGGAGAAAGAGTTGCCATGGGGCAGAGGAAGG...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCACGACGACAGAGCTCCTaGAGCTCCCTAAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLARRQSS*SSLRAS
Trigger: GGAAGCTCTTAGGGAGCTCCAGGAGCTCTGTCGTCG...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGGCATGGAACCGCCTTaGCCTCCAGTGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAGMEPP*PPVLFL
Trigger: CAGAAAGAGCACTGGAGGCCAAGGCGGTTCCATGCC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAATTCCAGAAGGAGCTGTaGGTTTTGACTTCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKFQKEL*VLTSSG
Trigger: GCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAA...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCATTGAGGATGGACCTCTaGTTGAAGCTTCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSLRMDL*LKLRPQ
Trigger: CTGCGGGCGAAGCTTCAACCAGAGGTCCATCCTCAA...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCAGCTTCCGCCATCTCTaGATGCTCTTTAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPSFRHL*MLFKHL
Trigger: AAGATGCTTAAAGAGCATCCAGAGATGGCGGAAGCT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp TTTTGCCTTTACTCCCAGCTTTGTTCGGCAGGGGGACACAGACAGTCCACTGAAAGCTTCCGCCATCTCTaGATGCTCTTTAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: FCLYSQLCSAGGHRQSTESFRHL*MLFKHL
Trigger: AAGATGCTTAAAGAGCATCCAGAGATGGCGGAAGCT...TTCAGTGGACTGTCTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGGGCAGGAGTGGTCATaGGAAGATGTTCTCACGGGC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAGQEWS*EDVLTG
Trigger: GCCCGTGAGAACATCTTCCCATGACCACTCCTGCCC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGCAGGAGGGCAGGAGTaGTCATGGGAAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSAGGQE*SWEDVL
Trigger: GAGAACATCTTCCCATGACCACTCCTGCCCTCCTGC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAAATATCCACGGGTTCTaGAGATCAGGTACATCCACG +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETNIHGF*RSGTST
Trigger: CGTGGATGTACCTGATCTTCAGAACCCGTGGATATT...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACCGTTTCAAAGTGGGCTaGGTAATACAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHRFKVG*VIQLCV
Trigger: AACACAAAGCTGTATTACTCAGCCCACTTTGAAACG...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGAGGCCCAGCTCCTTCTaGAGCTTAAGATATGCCAAC +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQRPSSF*SLRYAN
Trigger: GTTGGCATATCTTAAGCTTCAGAAGGAGCTGGGCCT...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGAGCTTCCGCCATCTCTaGATGCTCTTTAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SITEEQQQPRVDISDTFTSFRHL*MLFKHL
Trigger: AAGATGCTTAAAGAGCATCCAGAGATGGCGGAAGCT...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACAAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETRWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAAATGGCCCCAACCCCTaGGATCCAGCAGTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLANGPNP*DPAVKN
Trigger: GTTCTTTACTGCTGGATCGCAGGGGTTGGGGCCATT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGCAGGCCCAGAGGATTTaGAGGAATATCCACGGGTTC +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGQAQRI*RNIHGF
Trigger: GAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTG...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCACAGGCCCAGAGGATTTaGAGGAATATCCACGGGTTC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAQAQRI*RNIHGF
Trigger: GAACCCGTGGATATTCCTGCAAATCCTCTGGGCCTG...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGCCTGGCTGTCAGCCCTaGCTAGCTGCTCTGATAATT +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGPGCQP*LAALII
Trigger: AATTATCAGAGCAGCTAGGCAGGGCTGACAGCCAGG...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTCCTTCCTCTGCCCCATaGCAACTCTTTCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCPSSAP*QLFLQF
Trigger: AAACTGGAGAAAGAGTTGCCATGGGGCAGAGGAAGG...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACATTGTTTAGCACCACTTaGGTAAGAGATGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETLFSTT*VRDGSS
Trigger: GCTGCTTCCATCTCTTACCCAAGTGGTGCTAAACAA...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp TCTCAGCCTGAACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAAACCCAGAGGAATGCTaGCTGTGTATGACAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SQPELNRRRLLPSNIGRKNPEEC*LCMTKE
Trigger: CTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTT...TTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGTTCAGGCTGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGGAGAAAATCTCAGCCTaGACTGAACCGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGEKISA*TEPQET
Trigger: AGTCTCCTGCGGTTCAGTTCAGGCTGAGATTTTCTC...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR TCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAAGGCCCAGCTCCTTCTaGAGCTTAAGATATGCCAAC +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLARPSSF*SLRYAN
Trigger: GTTGGCATATCTTAAGCTTCAGAAGGAGCTGGGCCT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGAGTAAAGAACCCAGCTaGCATCTCTTGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGSKEPS*HLLVSG
Trigger: CCCAGAGACCAAGAGATGGCAGCTGGGTTCTTTACT...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTAGCAGCAGCCCCGTGTaGACATCTCAGATACATTTA +
Preference number: 4 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCSSSPV*TSQIHL
Trigger: TAAATGTATCTGAGATGTCCACACGGGGCTGCTGCT...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR CAA 72 bp GCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATaGTTTAGCACCACTTGGGTAAGAGATGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGDCFPQTLEEK*FSTTWVRDGSS
Trigger: GCTGCTTCCATCTCTTACCCAAGTGGTGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCACACTTGGGTAAGAGATaGAAGCAGCTATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAHLGKR*KQLCSL
Trigger: CAGAGAGCATAGCTGCTTCCATCTCTTACCCAAGTG...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CCA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGCCCCTATTTTATTCATaGATGTGTCTCAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQPLFYS*MCLKHP
Trigger: TGGGTGCTTGAGACACATCCATGAATAAAATAGGGG...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR CAA 72 bp ATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTTaGTTACAGGGCCTCAATAAATACTTGGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: MCLKHPEEFLTC*LQGLNKYLGNG
Trigger: CCCATTTCCCAAGTATTTATTGAGGCCCTGTAACAAACATGTCAGGAACTCTTCTGGGTGCTTGAGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR GCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAAGATGGAAGCAGCTATaGTCTCTGGAAGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLARWKQL*SLEALS
Trigger: ACTTAGAGCTTCCAGAGAGCATAGCTGCTTCCATCT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR GCA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTCTGAAGCTTAAGATATaGCAACTTGCTGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCLKLKI*QLAETQ
Trigger: CTGGGTTTCAGCAAGTTGGCATATCTTAAGCTTCAG...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CCA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAGCCTCAATAAATACTTaGGAAATGGGTCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: TEPQETASLKHWKKNCLAASINT*EMGPMR
Trigger: TCTCATTGGACCCATTTCCCAAGTATTTATTGAGGC...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
3UTR CAA 72 bp TTCCTGACATGTTTGTTACAGGGCCTCAATAAATACTaGGGAAATGGGTCCAATGAGAATGGGGTGAAATTA +
Preference number: 4 (lower is better)
Translates to: FLTCLLQGLNKY*GNGSNENGVKL
Trigger: TAATTTCACCCCATTCTCATTGGACCCATTTCCCAAGTATTTATTGAGGCCCTGTAACAAACATGTCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCACGATGGCGGCCAGGGCCTaGCCACTCTCTGGGCCATGC +
Preference number: 5 (lower is better)
Translates to: RVMGCRMHPQRTTPRGITMAARA*PLSGPC
Trigger: GCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCAT...CGTGATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS CCA 90 bp TTCTGTCAGGTCCTCCACCATGGCGGCCAGGGCCTTGCCACTCTCTaGGCCATGCTCCCGGATCCAGGCGTAGAACTCGCGGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: FCQVLHHGGQGLATL*AMLPDPGVELAGQD
Trigger: ATCCTGCCCCGCGAGTTCTACGCCTGGATCCGGGAGCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000466948.1
ENST00000481424.5
CDS-3UTR CAA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCCTTGCTCCCACCGCCTaGCTCCTGGAAGGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: KPGLAFPALANGWEGDGTLAPTA*LLEGPC
Trigger: ACACGGGCCTTCCAGGAGCAAGGCGGTGGGAGCAAG...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262941.7
CDS-3UTR CAA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATACCAGCCGCTCCCCTTaGCTGAACCGCTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHTSRSP*LNRFPH
Trigger: GTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGCTGGT...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS TCA 90 bp CCTCGTGCCCCATGGTCCGTGCTGGACCCATTTACCCGCCTGCCATaGAGTCCCCTTCCTTTGCCAGGAGCGCCAGAGCTACGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PRAPWSVLDPFTRLP*SPLPLPGAPELRQD
Trigger: GTCCTGCCGTAGCTCTGGCGCTCCTGGCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 90 bp CCAGTGCTCTTTCTGTCAGGTCCTCCACCATGGCGGCCAGGGCCTTaGCACTCTCTGGGCCATGCTCCCGGATCCAGGCGTAGAACTCGC +
Preference number: 5 (lower is better)
Translates to: PVLFLSGPPPWRPGP*HSLGHAPGSRRRTR
Trigger: GCGAGTTCTACGCCTGGATCCGGGAGCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCATGGTGGAGGACCTGACAGAAAGAGCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000466948.1
ENST00000481424.5
CDS GCA 90 bp CAGCTCCTCGTGCCCCATGGTCCGTGCTGGACCCATTTACCCGCCTaGCATGAAGTCCCCTTCCTTTGCCAGGAGCGCCAGAGCTACGGC +
Preference number: 5 (lower is better)
Translates to: QLLVPHGPCWTHLPA*HEVPFLCQERQSYG
Trigger: GCCGTAGCTCTGGCGCTCCTGGCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS-3UTR CAA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATCTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHLAFPA*ANGWEG
Trigger: GCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAG...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS CCA 90 bp TGCACAGGGGCCTGGGTGTCCCTTGCCCTATTCTCAGCTGGGGCCTaGGTGTCTCCTGTTCTCAGCTGGCAAGATTGTCCCGGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: CTGAWVSLALFSAGA*VSPVLSWQDCPGPV
Trigger: GACAGGGCCGGGACAATCTTGCCAGCTGAGAACAGGAGACACCCAGGCCCCAGCTGAGAATAGGGCAAGGGACACCCAGGCCCCTGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS-3UTR CAA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAATGGCGGCCAGGGCCTaGCCACTCTCTGGGCCATGC +
Preference number: 5 (lower is better)
Translates to: QCFPAAITLHPARPCSEKMAARA*PLSGPC
Trigger: GCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCAT...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTACCTGGGTCTGGACCTaGAACTCCTTCCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLTWVWT*NSFPRG
Trigger: CCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGT...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCCGGTGCACCGCCAGATaGGCATTCCTGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RWDQCFPAAITLHPARPCRCTAR*AFLLKL
Trigger: GAGCTTCAGCAGGAATGCCAATCTGGCGGTGCACCG...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGAGGATGGACCTCTGGTaGAAGCTTCGCCCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QALPFPRWRMGGKAMGPVRMDLW*KLRPQA
Trigger: TGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCCT...CACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGLAFPA*ANGWEG
Trigger: GCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAG...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGCTATGCTCACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGATGGAACCCACCGCCTaGGCCTCCAGTGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: CYAHCTSGSWRCWVFWCRMEPTA*ASSALS
Trigger: AGAAAGAGCACTGGAGGCCAAGGCGGTGGGTTCCAT...CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS TCA 90 bp CGCCTTGCTCCTGGAAGGCCCGTGTCTCATCTCCAGGGTCCTGACTaGGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLAPGRPVSHLQGPD*AAPRYLGLDLELLP
Trigger: GGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGAGACACGGGCCTTCCAGGAGCAAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262941.7
CDS GCA 90 bp TGCCTGGGAGCAGATCCCAGCTGGCTCCCAAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCCCTGCCTGTGGCATGGAACCGCCTT +
Preference number: 5 (lower is better)
Translates to: CLGADPSWLPSASAK*CFLLLSLPVAWNRL
Trigger: AAGGCGGTTCCATGCCACAGGCAGGGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGCCAGCTGGGATCTGCTCCCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466948.1
CDS CCA 90 bp CATCCCCCATTCAGGCTTGACCTCCACTGGCCCCAGCTGGATGCCTaGCTCCCAAGCGCCTCTGCAAAGTGCTGTTTCCTCCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HPPFRLDLHWPQLDA*LPSASAKCCFLLLS
Trigger: GGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000481424.5
ENST00000485586.1
CDS-3UTR CAA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGAACCTGGGTCTGGACCTaGAACTCCTTCCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGTWVWT*NSFPRG
Trigger: CCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGT...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: KPGLAFPALANGWEGDGTKELWV*TSSGRG
Trigger: CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTT...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGACCAGCCGCTCCCCTTaGCTGAACCGCTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: LEALSKPGLAFPALANGWTSRSP*LNRFPH
Trigger: GTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGCTGGT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAACCAGCCGCTCCCCTTaGCTGAACCGCTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: QCFPAAITLHPARPCSEKTSRSP*LNRFPH
Trigger: GTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGCTGGT...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGCCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SLEALSKPGLAFPALANGPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GGGTGGGGGAAGAGTCTGAGCTATGACCCTGCAGGCAAGACAGAGCCCTCAGGACTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GWGKSLSYDPAGKTEPSGLAFPA*ANGWEG
Trigger: GCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAG...TCCTGAGGGCTCTGTCTTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCCACTGTCCTAAGCTCTaGGCCCCACAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: KPGLAFPALANGWEGDGTHCPKL*APQEIG
Trigger: CCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTG...GGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS TCA 90 bp CACCTTGCTCCTGGAAGGCCCGTGTCTCATCTCCAGGGTCCTGACTaGGCTGCTCCTCGGTACCTGGGTCTGGACCTTGAACTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: HLAPGRPVSHLQGPD*AAPRYLGLDLELLP
Trigger: GGGAAGGAGTTCAAGGTCCAGACCCAGGTACCGAGGAGCAGCTCAGTCAGGACCCTGGAGATGAGACACGGGCCTTCCAGGAGCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS CCA 90 bp TTTCCCATGCACAGGGGCCTGGGTGTCCCTTGCCCTATTCTCAGCTaGGGCCTGGGTGTCTCCTGTTCTCAGCTGGCAAGATTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: FPMHRGLGVPCPILS*GLGVSCSQLARLSR
Trigger: CCGGGACAATCTTGCCAGCTGAGAACAGGAGACACCCAGGCCCCAGCTGAGAATAGGGCAAGGGACACCCAGGCCCCTGTGCATGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS-3UTR CAA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGATGGCGGCCAGGGCCTaGCCACTCTCTGGGCCATGC +
Preference number: 5 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAMAARA*PLSGPC
Trigger: GCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCAT...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGAAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGKELWV*TSSGRG
Trigger: CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTT...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACCAGTGCTTGTCTTCTGGTGCCGGTaGAGGATGGACCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ALPFPRWRMGGKAMGPVLVFWCR*RMDLWL
Trigger: CAACCAGAGGTCCATCCTCAACCGGCACCAGAAGAC...AAGCACTGGTCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGACCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp GAAGGCGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCTTCCTGTGGGGGTTTaGCCTCCTTTTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: EGDGTSAFLQPSPCTPQGLPVGV*PPFPCS
Trigger: GGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAG...GCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGATGGTGCCTGACGAGATaGGAGCTCCGACTGAATCCT +
Preference number: 5 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGWCLTR*ELRLNP
Trigger: AGGATTCAGTCGGAGCTCCAATCTCGTCAGGCACCA...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGTGGTGCCTGACGAGATaGGAGCTCCGACTGAATCCT +
Preference number: 5 (lower is better)
Translates to: DQCFPAAITLHPARPCSEWCLTR*ELRLNP
Trigger: AGGATTCAGTCGGAGCTCCAATCTCGTCAGGCACCA...CTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAAGGATGGACCTCTGGTaGAAGCTTCGCCCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QCFPAAITLHPARPCSEKRMDLW*KLRPQA
Trigger: TGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCCT...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATACAGGCCCAGAGGATTaGCAGGAATATCCACGGGTT +
Preference number: 5 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHTGPED*QEYPRV
Trigger: AACCCGTGGATATTCCTGCAAATCCTCTGGGCCTGT...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS GCA 90 bp CACCTGTGGGTGGAGACAGTCTTACCTGGAGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: HLWVETVLPGETLQS*GSTYSPKQSIWAGV
Trigger: GACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCACCCACAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS-3UTR CAA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACATGGCGGCCAGGGCCTaGCCACTCTCTGGGCCATGC +
Preference number: 5 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHMAARA*PLSGPC
Trigger: GCATGGCCCAGAGAGTGGCAAGGCCCTGGCCGCCAT...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTATCCCCCATTCAGGCTaGACCTCCACTGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGIPHSG*TSTGPS
Trigger: GCTGGGGCCAGTGGAGGTCAAGCCTGAATGGGGGAT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGGGAAGATGTTCTCACGGGCACACAGCACAGATACCCTGAGAATGCCTCGGGTACCTGGGTCTGGACCTaGAACTCCTTCCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: WEDVLTGTQHRYPENASGTWVWT*NSFPRG
Trigger: CCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGT...ACCCGAGGCATTCTCAGGGTATCTGTGCTGTGTGCCCGTGAGAACATCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LEALSKPGLAFPALANGWKELWV*TSSGRG
Trigger: CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTT...CCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CATCATCCCCAGTGGGTGTCCAGGACCCCTAGTGCCTTGGATGACAAGGGTCTGCCCAGCTGCCATCTCTaGGTCTCTGGGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: HHPQWVSRTPSALDDKGLPSCHL*VSGIHC
Trigger: GCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG...CAGACCCTTGTCATCCAAGGCACTAGGGGTCCTGGACACCCACTGGGGATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAATTTGCCTCCTTTTCCTaGCTCCCACCGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: QCFPAAITLHPARPCSEKFASFS*LPPPGE
Trigger: CTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAAA...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GCCTCGGGTCATGGGCTGTCGCATGCATCCCCAACGCACAACCCCCAGAGGCATGTAAAATTCACACAGTaGCCTGGGAGCAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: ASGHGLSHASPTHNPQRHVKFTQ*PGSRSQ
Trigger: CTGGGATCTGCTCCCAGGCAACTGTGTGAATTTTAC...ATGCCTCTGGGGGTTGTGCGTTGGGGATGCATGCGACAGCCCATGACCCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS TCA 90 bp TTGCCTGATGCCCACAAGGGAAATATGGCCAGGCCTCTGCCCTCATaGCCAAACAGAGGCTTCAGGCCCTTCTGCATGGCAGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: LPDAHKGNMARPLPS*PNRGFRPFCMAASP
Trigger: GGGAGATGCTGCCATGCAGAAGGGCCTGAAGCCTCTGTTTGGTCATGAGGGCAGAGGCCTGGCCATATTTCCCTTGTGGGCATCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS GCA 90 bp TCCTCTATTGACACAGGAAAGCAGCTCCTCGTGCCCCATGGTCCGTaGTGGACCCATTTACCCGCCTGCCATGAAGTCCCCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SSIDTGKQLLVPHGP*WTHLPACHEVPFLC
Trigger: GCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGTGTCAATAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS CCA 90 bp TCTATTGACACAGGAAAGCAGCTCCTCGTGCCCCATGGTCCGTGCTaGACCCATTTACCCGCCTGCCATGAAGTCCCCTTCCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SIDTGKQLLVPHGPC*THLPACHEVPFLCQ
Trigger: CTGGCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGTGTCAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS-3UTR CAA 90 bp CAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAACTTCCTGTGGGGGTTTaGCCTCCTTTTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: QCFPAAITLHPARPCSEKLPVGV*PPFPCS
Trigger: GGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAG...TTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CATCATCCCCAGTGGGTGTCCAGGACCCCTAGTGCCTTGGATGACAAGGGTCTGTGGTGCCTGACGAGATaGGAGCTCCGACTGAATCCT +
Preference number: 5 (lower is better)
Translates to: HHPQWVSRTPSALDDKGLWCLTR*ELRLNP
Trigger: AGGATTCAGTCGGAGCTCCAATCTCGTCAGGCACCA...CAGACCCTTGTCATCCAAGGCACTAGGGGTCCTGGACACCCACTGGGGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp TCTAGTCTCTCATTCACCACGGCATTCCCACGGCCAGGTGCTCAGAGGATGTTCCGGTGCACCGCCAGATaGGCATTCCTGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SSLSFTTAFPRPGAQRMFRCTAR*AFLLKL
Trigger: GAGCTTCAGCAGGAATGCCAATCTGGCGGTGCACCG...GAACATCCTCTGAGCACCTGGCCGTGGGAATGCCGTGGTGAATGAGAGACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAGGATGGACCTCTGGTaGAAGCTTCGCCCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGRMDLW*KLRPQA
Trigger: TGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCCT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGAAGGATGGACCTCTGGTaGAAGCTTCGCCCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRRMDLW*KLRPQA
Trigger: TGCCTGCGGGCGAAGCTTCAACCAGAGGTCCATCCT...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGCCCAGCTGCCATCTCTaGGTCTCTGGGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: SLEALSKPGLAFPALANGPSCHL*VSGIHC
Trigger: GCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGGCTGGGGTCACATTTGCCTCCTTTTCCTaGCTCCCACCGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: QSCGSTYSPKQSIWAGVTFASFS*LPPPGE
Trigger: CTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAAA...TGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS-3UTR CAA 90 bp CGATGGGACCAGTGCTTTCCTGCAGCCATCACCTTGCACCCCGCAAGGCCCTGCACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: RWDQCFPAAITLHPARPCTRVKV*PLLPAL
Trigger: CAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGT...GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGGAAAGCACTGGTCCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp ATCCCCAACGCACAACCCCCAGAGGCATCACGTCTAGTCTCTCATTCACCACGGCACTGTCCTAAGCTCTaGGCCCCACAGGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: IPNAQPPEASRLVSHSPRHCPKL*APQEIG
Trigger: CCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTG...CCGTGGTGAATGAGAGACTAGACGTGATGCCTCTGGGGGTTGTGCGTTGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS GCA 90 bp CAGTTCCTCACCTGTGGGTGGAGACAGTCTTACCTGGAGAGACCCTaGAGTCCTGCGGTTCCACATACTCCCCAAAGCAGTCTATCTGGG +
Preference number: 5 (lower is better)
Translates to: QFLTCGWRQSYLERP*SPAVPHTPQSSLSG
Trigger: CCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCACCCACAGGTGAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 90 bp CTCCATCATTTGGCTCCTCTATTGACACAGGAAAGCAGCTCCTCGTaGCCCATGGTCCGTGCTGGACCCATTTACCCGCCTGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: LHHLAPLLTQESSSS*PMVRAGPIYPPAMK
Trigger: CTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGTGTCAATAGAGGAGCCAAATGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 90 bp CCACTCCTACTGCTTCCTCAAATCTTTGGATTCTTTAACATTCCCTaGCCACGCCAAGGGCGCCAGACCTGGATCCCCTCCTCACCCACC +
Preference number: 5 (lower is better)
Translates to: PLLLLPQIFGFFNIP*PRQGRQTWIPSSPT
Trigger: GGTGGGTGAGGAGGGGATCCAGGTCTGGCGCCCTTGGCGTGGGCAGGGAATGTTAAAGAATCCAAAGATTTGAGGAAGCAGTAGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS CCA 90 bp TCAGAACTCCCCAGTTCCTCACCTGTGGGTGGAGACAGTCTTACCTaGAGAGACCCTGCAGTCCTGCGGTTCCACATACTCCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SELPSSSPVGGDSLT*RDPAVLRFHILPKA
Trigger: TGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCACCCACAGGTGAGGAACTGGGGAGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS-3UTR CAA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCACCTGGGTCTGGACCTaGAACTCCTTCCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPTWVWT*NSFPRG
Trigger: CCCCCTGGGGAAGGAGTTCAAGGTCCAGACCCAGGT...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GCTTTTCTGAGACACTGTCCTAAGCTCTTGGCCCCACAGGAGATAGGGAAGAGGCGGTGCACCGCCAGATaGGCATTCCTGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: AFLRHCPKLLAPQEIGKRRCTAR*AFLLKL
Trigger: GAGCTTCAGCAGGAATGCCAATCTGGCGGTGCACCG...CCTCTTCCCTATCTCCTGTGGGGCCAAGAGCTTAGGACAGTGTCTCAGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGGTCTTCTGGTGCCGGTaGAGGATGGACCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KQLCSLEALSKPGLAFPAVFWCR*RMDLWL
Trigger: CAACCAGAGGTCCATCCTCAACCGGCACCAGAAGAC...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTCCCAGCTGCCATCTCTaGGTCTCTGGGATTCACTGC +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGPSCHL*VSGIHC
Trigger: GCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGG...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGTGGACCTCAGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATTTGCCTCCTTTTCCTaGCTCCCACCGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: CGPQYYRGAAAAPCGHLRFASFS*LPPPGE
Trigger: CTCTCCAGGCGGTGGGAGCAAGGAAAAGGAGGCAAA...TCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACTGAGGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTAGGACCCCTAGTGCCTaGGATGACAAGGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGRTPSA*DDKGLE
Trigger: CTCCAGACCCTTGTCATCCAAGGCACTAGGGGTCCT...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS TCA 90 bp GCCCTTCTGCATGGCAGCATCTCCCCTGGGAATGGCCTTTCTTGCTaGAAACGCCACTGCTCTCCAAAAAGAACCTCAGGGAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: ALLHGSISPGNGLSC*KRHCSPKRTSGSLR
Trigger: CCTCAGACTCCCTGAGGTTCTTTTTGGAGAGCAGTGGCGTTTTCAGCAAGAAAGGCCATTCCCAGGGGAGATGCTGCCATGCAGAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS TCA 90 bp CTGCTCTCCTTTCCCAGTCATCCATCAGGGGGCTGTACCACAAAGTaGCCGAAATATGGCTGGAACCTCAAGGAAGCACGTGCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLSFPSHPSGGCTTK*PKYGWNLKEARAVP
Trigger: TGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCACTTTGTGGTACAGCCCCCTGATGGATGACTGGGAAAGGAGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTCTTCCTGTGGGGGTTTaGCCTCCTTTTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGLPVGV*PPFPCS
Trigger: GGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAG...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AAGCAGCTATGCTCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGCTTCCTGTGGGGGTTTaGCCTCCTTTTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KQLCSLEALSKPGLAFPALPVGV*PPFPCS
Trigger: GGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAG...CGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGAGCATAGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTGTCTTCTGGTGCCGGTaGAGGATGGACCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPVFWCR*RMDLWL
Trigger: CAACCAGAGGTCCATCCTCAACCGGCACCAGAAGAC...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTCCTTTACTCCCAGCTTaGTTCGGCAGGGGGACACAG +
Preference number: 5 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPPLLPA*FGRGTQ
Trigger: CTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS CCA 90 bp CAGCCGAAAAGTCTCTGGACTAGGGTCCTCCCTTCCTCTGCCCCATaGCAACTCTTTCTCCAGTTTCACCACAGGAATACCCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: QPKSLWTRVLPSSAP*QLFLQFHHRNTQLL
Trigger: CAGCAGTTGGGTATTCCTGTGGTGAAACTGGAGAAAGAGTTGCCATGGGGCAGAGGAAGGGAGGACCCTAGTCCAGAGACTTTTCGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS CCA 90 bp CACCACAGGAATACCCAACTGCTGCTGAGGAGCTTCCGCCATCTCTaGATGCTCTTTAAGCATCTTCAGACTCCCTCCGAGGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: HHRNTQLLLRSFRHL*MLFKHLQTPSEETE
Trigger: CTCAGTCTCCTCGGAGGGAGTCTGAAGATGCTTAAAGAGCATCCAGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTATTCCTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS-3UTR CAA 90 bp GAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACGAGACACTTGCCTTTCCCGCGTaGGCGAATGGGTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EDLQEYPRVLKIRYIHETLAFPA*ANGWEG
Trigger: GCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAG...TGTCTCGTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTTTACTCCCCCTTTACTCCCAGCTTaGTTCGGCAGGGGGACACAG +
Preference number: 5 (lower is better)
Translates to: QEDEVPATNTCQGFAFTPPLLPA*FGRGTQ
Trigger: CTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG...GGGAGTAAAGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp TGCTATGCTCACTGCACCAGCGGCTCCTGGCGGTGCTGGGTCTTCTGGTGCCGGCTAATAGTTGGTGTGTaGACAGTTGTTATAGTGCAA +
Preference number: 5 (lower is better)
Translates to: CYAHCTSGSWRCWVFWCRLIVGV*TVVIVQ
Trigger: TTGCACTATAACAACTGTCAACACACCAACTATTAG...CCGGCACCAGAAGACCCAGCACCGCCAGGAGCCGCTGGTGCAGTGAGCATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394150.5
CDS CCA 90 bp TCCCAGTCATCCATCAGGGGGCTGTACCACAAAGTGACCGAAATATaGCTGGAACCTCAAGGAAGCACGTGCGGTGCCAAATCACTTGGT +
Preference number: 5 (lower is better)
Translates to: SQSSIRGLYHKVTEI*LEPQGSTCGAKSLG
Trigger: ACCAAGTGATTTGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCACTTTGTGGTACAGCCCCCTGATGGATGACTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS-3UTR CAA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGGTCTTCTGGTGCCGGTaGAGGATGGACCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SITEEQQQPRVDISDTFTVFWCR*RMDLWL
Trigger: CAACCAGAGGTCCATCCTCAACCGGCACCAGAAGAC...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp TTTGCAATTATAGGACACTATCAACAAAGGACAAACTCACTCACTCAGCCAGGGCCTGCAGCCATCACCTaGCACCCCGCAAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FAIIGHYQQRTNSLTQPGPAAIT*HPARPC
Trigger: GCAGGGCCTTGCGGGGTGCAAGGTGATGGCTGCAGG...CCCTGGCTGAGTGAGTGAGTTTGTCCTTTGTTGATAGTGTCCTATAATTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGCCTTTACTCCCAGCTTaGTTCGGCAGGGGGACACAG +
Preference number: 5 (lower is better)
Translates to: SITEEQQQPRVDISDTFTPLLPA*FGRGTQ
Trigger: CTGTGTCCCCCTGCCGAACAAAGCTGGGAGTAAAGG...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp TCTCTGGAAGCTCTAAGTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLEALSKPGLAFPALANGTRVKV*PLLPAL
Trigger: CAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGT...CCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTACTTAGAGCTTCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGTAAAATTCACACAGTaGCCTGGGAGCAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGVKFTQ*PGSRSQ
Trigger: CTGGGATCTGCTCCCAGGCAACTGTGTGAATTTTAC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AGTATTACAGAGGAGCAGCAGCAGCCCCGTGTGGACATCTCAGATACATTTACGAGGACCCCTAGTGCCTaGGATGACAAGGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SITEEQQQPRVDISDTFTRTPSA*DDKGLE
Trigger: CTCCAGACCCTTGTCATCCAAGGCACTAGGGGTCCT...CGTAAATGTATCTGAGATGTCCACACGGGGCTGCTGCTGCTCCTCTGTAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAACCAGCCGCTCCCCTTaGCTGAACCGCTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: TEPQETASLKHWKKNCLATSRSP*LNRFPH
Trigger: GTGCGGGAAGCGGTTCAGCAAAGGGGAGCGGCTGGT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp AGAGCCCTCAGGAAGATGAGGTCCCAGCTACCAACACGTGTCAAGGTTTTGCCTGTAAAATTCACACAGTaGCCTGGGAGCAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: RALRKMRSQLPTRVKVLPVKFTQ*PGSRSQ
Trigger: CTGGGATCTGCTCCCAGGCAACTGTGTGAATTTTAC...AGGCAAAACCTTGACACGTGTTGGTAGCTGGGACCTCATCTTCCTGAGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GTAAGCCAGGCCTTGCCTTTCCCGCGTTGGCGAATGGGTGGGAAGGCGATGGGACTAATAGTTGGTGTGTaGACAGTTGTTATAGTGCAA +
Preference number: 5 (lower is better)
Translates to: VSQALPFPRWRMGGKAMGLIVGV*TVVIVQ
Trigger: TTGCACTATAACAACTGTCAACACACCAACTATTAG...TCCCATCGCCTTCCCACCCATTCGCCAACGCGGGAAAGGCAAGGCCTGGCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS-3UTR CAA 90 bp GGCCCAGAGGATTTGCAGGAATATCCACGGGTTCTGAAGATCAGGTACATCCACACAGGCCCAGAGGATTaGCAGGAATATCCACGGGTT +
Preference number: 5 (lower is better)
Translates to: GPEDLQEYPRVLKIRYIHTGPED*QEYPRV
Trigger: AACCCGTGGATATTCCTGCAAATCCTCTGGGCCTGT...GTGGATGTACCTGATCTTCAGAACCCGTGGATATTCCTGCAAATCCTCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CCCCTATTTTATTCATGGATGTGTCTCAAGCACCCAGAAGAGTTCCTGACATGTCGGTGCACCGCCAGATaGGCATTCCTGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PLFYSWMCLKHPEEFLTCRCTAR*AFLLKL
Trigger: GAGCTTCAGCAGGAATGCCAATCTGGCGGTGCACCG...ACATGTCAGGAACTCTTCTGGGTGCTTGAGACACATCCATGAATAAAATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp CAGCCATCACCTTGCACCCCGCAAGGCCCTGCAGTGAGAAAGATGAATGATGGTGGCCTCAATAAATACTaGGGAAATGGGTCCAATGAG +
Preference number: 5 (lower is better)
Translates to: QPSPCTPQGPAVRKMNDGGLNKY*GNGSNE
Trigger: CTCATTGGACCCATTTCCCAAGTATTTATTGAGGCC...ACCATCATTCATCTTTCTCACTGCAGGGCCTTGCGGGGTGCAAGGTGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS TCA 90 bp GGCAACTCTTTCTCCAGTTTCACCACAGGAATACCCAACTGCTGCTaGGGAGCTTCCGCCATCTCTGGATGCTCTTTAAGCATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GNSFSSFTTGIPNCC*GASAISGCSLSIFR
Trigger: TCTGAAGATGCTTAAAGAGCATCCAGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTATTCCTGTGGTGAAACTGGAGAAAGAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS TCA 90 bp TTGGTGTCATTAGAGCAGCACCAGAGAATTGTTACAGGAGCCCTATaGGCCACAGAGAAACAGTACTGCCATGGACAACCCTTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: LVSLEQHQRIVTGAL*ATEKQYCHGQPFSG
Trigger: TCCGGAAAAGGGTTGTCCATGGCAGTACTGTTTCTCTGTGGCTCATAGGGCTCCTGTAACAATTCTCTGGTGCTGCTCTAATGACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS TCA 90 bp ACTCATGCATCAGGCCCTGAGCAACTTTTATCTGTCCACGCCATTTaGCAAGGGTCCCCTCTACCTGCCATCACCAAGCCCAAATATTAT +
Preference number: 5 (lower is better)
Translates to: THASGPEQLLSVHAI*QGSPLPAITKPKYY
Trigger: ATAATATTTGGGCTTGGTGATGGCAGGTAGAGGGGACCCTTGTCAAATGGCGTGGACAGATAAAAGTTGCTCAGGGCCTGATGCATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481424.5
ENST00000485586.1
CDS GCA 90 bp TACCACAAAGTGACCGAAATATGGCTGGAACCTCAAGGAAGCACGTaGGGTGCCAAATCACTTGGTGTCATTAGAGCAGCACCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: YHKVTEIWLEPQGST*GAKSLGVIRAAPEN
Trigger: ATTCTCTGGTGCTGCTCTAATGACACCAAGTGATTTGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCACTTTGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS-3UTR CAA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCAAAGGAGCTGTGGGTTTaGACTTCGTCAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TEPQETASLKHWKKNCLAKELWV*TSSGRG
Trigger: CCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTT...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS TCA 90 bp GCCTGTGGCATGGAACCTAAGAACAGTTCCCAACACCGATTAGAATaGGGCCTGGGCAAGGCTGTTATGAAGGGAGTTGAACTAAAATCT +
Preference number: 5 (lower is better)
Translates to: ACGMEPKNSSQHRLE*GLGKAVMKGVELKS
Trigger: AGATTTTAGTTCAACTCCCTTCATAACAGCCTTGCCCAGGCCTCATTCTAATCGGTGTTGGGAACTGTTCTTAGGTTCCATGCCACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481424.5
ENST00000485586.1
CDS TCA 90 bp ACTCCCTCCGAGGAGACTGAGAATGACTGCATCAATGACCCCTCCTaGAACTCATATGCTGGTACAGCAGACAGAAAAAGTCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: TPSEETENDCINDPS*NSYAGTADRKSQME
Trigger: TTCCATTTGACTTTTTCTGTCTGCTGTACCAGCATATGAGTTTCAGGAGGGGTCATTGATGCAGTCATTCTCAGTCTCCTCGGAGGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS-3UTR CAA 90 bp CTGAAACCCAGAGGAATGCTGGCTGTGTATGACAAAAGAGCATCTGTGATTCAGACACGTGTCAAGGTTTaGCCTTTACTCCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LKPRGMLAVYDKRASVIQTRVKV*PLLPAL
Trigger: CAAAGCTGGGAGTAAAGGCAAAACCTTGACACGTGT...CTGAATCACAGATGCTCTTTTGTCATACACAGCCAGCATTCCTCTGGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS TCA 90 bp AGTGTCTTTAATCATGGACACAATGTAGGTGTTTGGGGGTCCTCATaGCCGACCTGTCTCCATACAGCCAGAATAATGGCCTCATGTTTT +
Preference number: 5 (lower is better)
Translates to: SVFNHGHNVGVWGSS*PTCLHTARIMASCF
Trigger: AAAACATGAGGCCATTATTCTGGCTGTATGGAGACAGGTCGGTCATGAGGACCCCCAAACACCTACATTGTGTCCATGATTAAAGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS-3UTR CAA 90 bp AAGCTCTACGAGGTCAACAGCTTCTCCCCCTATTTTATTCATGGATGTGTCTCAGGCCTCAATAAATACTaGGGAAATGGGTCCAATGAG +
Preference number: 5 (lower is better)
Translates to: KLYEVNSFSPYFIHGCVSGLNKY*GNGSNE
Trigger: CTCATTGGACCCATTTCCCAAGTATTTATTGAGGCC...TGAGACACATCCATGAATAAAATAGGGGGAGAAGCTGTTGACCTCGTAGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334715.7
ENST00000394152.7
CDS-3UTR CAA 90 bp ACTGAACCGCAGGAGACTGCTTCCCTCAAACATTGGAAGAAAAATTGTTTAGCACTAATAGTTGGTGTGTaGACAGTTGTTATAGTGCAA +
Preference number: 5 (lower is better)
Translates to: TEPQETASLKHWKKNCLALIVGV*TVVIVQ
Trigger: TTGCACTATAACAACTGTCAACACACCAACTATTAG...TGCTAAACAATTTTTCTTCCAATGTTTGAGGGAAGCAGTCTCCTGCGGTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
CDS GCA 90 bp TTACTTTGGGGGATATGGTTTATCTGCCTACTGAAAAAGTATTCCTaGAAGTCAGCTGAATATTTCTTGGTAGTTTCTAGAAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: LLWGIWFICLLKKYS*KSAEYFLVVSRRDL
Trigger: CAGATCCCTTCTAGAAACTACCAAGAAATATTCAGCTGACTTGCAGGAATACTTTTTCAGTAGGCAGATAAACCATATCCCCCAAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS CCA 90 bp AAGAAAGAAAGAAAGAAAGAAAGCTACATATTACTTTGGGGGATATaGTTTATCTGCCTACTGAAAAAGTATTCCTGCAAGTCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: KKERKKESYILLWGI*FICLLKKYSCKSAE
Trigger: TTCAGCTGACTTGCAGGAATACTTTTTCAGTAGGCAGATAAACCATATCCCCCAAAGTAATATGTAGCTTTCTTTCTTTCTTTCTTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS GCA 72 bp TCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCCGCCGCGGCCCTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: SLGFTAGRPGPA*RTGSAAAALKG
Trigger: GCCCTTCAGGGCCGCGGCGGCACTACCTGTTCTGCAGGCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473646.5
ENST00000493443.5
CDS GCA 72 bp TCCCTGCCTGTGGCATGGAACCGCCTTGGCCTCCAGTaGTCTTTCTGTCAGGTCCTCCACCATGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: SLPVAWNRLGLQ*SFCQVLHHGGQ
Trigger: CTGGCCGCCATGGTGGAGGACCTGACAGAAAGAGCACTGGAGGCCAAGGCGGTTCCATGCCACAGGCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394152.7
ENST00000466948.1
CDS GCA 72 bp GTGCCCCATGGTCCGTGCTGGACCCATTTACCCGCCTaGCATGAAGTCCCCTTCCTTTGCCAGGAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: VPHGPCWTHLPA*HEVPFLCQERQ
Trigger: CTGGCGCTCCTGGCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 72 bp CAGCTGGATGCCTGGCTCCCAAGCGCCTCTGCAAAGTaGTGTTTCCTCCTGCTCTCCCTGCCTGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: QLDAWLPSASAK*CFLLLSLPVAW
Trigger: CCATGCCACAGGCAGGGAGAGCAGGAGGAAACAGCACTTTGCAGAGGCGCTTGGGAGCCAGGCATCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000481424.5
ENST00000485586.1
CDS GCA 72 bp GACACAGGAAAGCAGCTCCTCGTGCCCCATGGTCCGTaGTGGACCCATTTACCCGCCTGCCATGAAGTCCCC +
Preference number: 6 (lower is better)
Translates to: DTGKQLLVPHGP*WTHLPACHEVP
Trigger: GGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS TCA 72 bp CCATGGTCCGTGCTGGACCCATTTACCCGCCTGCCATaGAGTCCCCTTCCTTTGCCAGGAGCGCCAGAGCTA +
Preference number: 6 (lower is better)
Translates to: PWSVLDPFTRLP*SPLPLPGAPEL
Trigger: TAGCTCTGGCGCTCCTGGCAAAGGAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS CCA 72 bp ACAGGAAAGCAGCTCCTCGTGCCCCATGGTCCGTGCTaGACCCATTTACCCGCCTGCCATGAAGTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TGKQLLVPHGPC*THLPACHEVPF
Trigger: GAAGGGGACTTCATGGCAGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS TCA 72 bp CAGGAAGTCAGGGTGACGAGAGTGTGCACGGGAGGCTaGACTACAGAAGGACGGGGGCTTGTGAGCAAGACG +
Preference number: 6 (lower is better)
Translates to: QEVRVTRVCTGG*TTEGRGLVSKT
Trigger: CGTCTTGCTCACAAGCCCCCGTCCTTCTGTAGTTCAGCCTCCCGTGCACACTCTCGTCACCCTGACTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS GCA 72 bp TCTCTGGGATTCACTGCGGGGAGGCCAGGACCCGCCTaGAGAACAGGTAGTGCTGAGCAGGGACAAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SLGFTAGRPGPA*RTGSAEQGQKA
Trigger: TGCTTTTTGTCCCTGCTCAGCACTACCTGTTCTGCAGGCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS TCA 72 bp GCCCACAAGGGAAATATGGCCAGGCCTCTGCCCTCATaGCCAAACAGAGGCTTCAGGCCCTTCTGCATGGCA +
Preference number: 6 (lower is better)
Translates to: AHKGNMARPLPS*PNRGFRPFCMA
Trigger: TGCCATGCAGAAGGGCCTGAAGCCTCTGTTTGGTCATGAGGGCAGAGGCCTGGCCATATTTCCCTTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS TCA 72 bp GCACGGGAGGCTGAACTACAGAAGGACGGGGGCTTGTaGGCAAGACGGTGTCATCAGTCCTGCTCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: AREAELQKDGGL*ARRCHQSCSPF
Trigger: GAAAGGAGAGCAGGACTGATGACACCGTCTTGCTCACAAGCCCCCGTCCTTCTGTAGTTCAGCCTCCCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS GCA 72 bp TTGGCTCCTCTATTGACACAGGAAAGCAGCTCCTCGTaGCCCATGGTCCGTGCTGGACCCATTTACCCGCCT +
Preference number: 6 (lower is better)
Translates to: LAPLLTQESSSS*PMVRAGPIYPP
Trigger: AGGCGGGTAAATGGGTCCAGCACGGACCATGGGGCACGAGGAGCTGCTTTCCTGTGTCAATAGAGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 72 bp GACCTGACATCCCCACTATCTGCGTCTTACTCACCTTaGTCCTGGAAGGCCCGTGTCTCATCTCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: DLTSPLSASYSP*SWKARVSSPGS
Trigger: GGACCCTGGAGATGAGACACGGGCCTTCCAGGAGCAAGGTGAGTAAGACGCAGATAGTGGGGATGTCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS CCA 72 bp GTAGCGGAACTGCCGAAACCTCAGCCGAAAAGTCTCTaGACTAGGGTCCTCCCTTCCTCTGCCCCATGGCAA +
Preference number: 6 (lower is better)
Translates to: VAELPKPQPKSL*TRVLPSSAPWQ
Trigger: TTGCCATGGGGCAGAGGAAGGGAGGACCCTAGTCCAGAGACTTTTCGGCTGAGGTTTCGGCAGTTCCGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262941.7
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000466948.1
ENST00000481424.5
CDS CCA 72 bp CCCAGTTCCTCACCTGTGGGTGGAGACAGTCTTACCTaGAGAGACCCTGCAGTCCTGCGGTTCCACATACTC +
Preference number: 6 (lower is better)
Translates to: PSSSPVGGDSLT*RDPAVLRFHIL
Trigger: GAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCACCCACAGGTGAGGAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS GCA 72 bp ACCTGTGGGTGGAGACAGTCTTACCTGGAGAGACCCTaGAGTCCTGCGGTTCCACATACTCCCCAAAGCAGT +
Preference number: 6 (lower is better)
Translates to: TCGWRQSYLERP*SPAVPHTPQSS
Trigger: ACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCACCCACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS TCA 72 bp TCAGGCCCTGAGCAACTTTTATCTGTCCACGCCATTTaGCAAGGGTCCCCTCTACCTGCCATCACCAAGCCC +
Preference number: 6 (lower is better)
Translates to: SGPEQLLSVHAI*QGSPLPAITKP
Trigger: GGGCTTGGTGATGGCAGGTAGAGGGGACCCTTGTCAAATGGCGTGGACAGATAAAAGTTGCTCAGGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481424.5
ENST00000485586.1
CDS GCA 72 bp GTGGAGACAGTCTTACCTGGAGAGACCCTGCAGTCCTaGGGTTCCACATACTCCCCAAAGCAGTCTATCTGG +
Preference number: 6 (lower is better)
Translates to: VETVLPGETLQS*GSTYSPKQSIW
Trigger: CCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAGGTAAGACTGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473646.5
CDS TCA 72 bp CATGGCAGCATCTCCCCTGGGAATGGCCTTTCTTGCTaGAAACGCCACTGCTCTCCAAAAAGAACCTCAGGG +
Preference number: 6 (lower is better)
Translates to: HGSISPGNGLSC*KRHCSPKRTSG
Trigger: CCCTGAGGTTCTTTTTGGAGAGCAGTGGCGTTTTCAGCAAGAAAGGCCATTCCCAGGGGAGATGCTGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS CCA 72 bp TCCATCAGGGGGCTGTACCACAAAGTGACCGAAATATaGCTGGAACCTCAAGGAAGCACGTGCGGTGCCAAA +
Preference number: 6 (lower is better)
Translates to: SIRGLYHKVTEI*LEPQGSTCGAK
Trigger: TTTGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCACTTTGTGGTACAGCCCCCTGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS CCA 72 bp GAACCAGAAGACTCCAGACAGAATCCCTTTTCACTCTaGTACCACACTTTCCCATGCACAGGGGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: EPEDSRQNPFSL*YHTFPCTGAWV
Trigger: CACCCAGGCCCCTGTGCATGGGAAAGTGTGGTACCAGAGTGAAAAGGGATTCTGTCTGGAGTCTTCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485586.1
CDS CCA 72 bp CTCAACCTCCAAGTGGATTATGCGGAAGACCTAGACTaGGAAGACAGACTTGGAAGTCCAAAGCACCAGGGG +
Preference number: 6 (lower is better)
Translates to: LNLQVDYAEDLD*EDRLGSPKHQG
Trigger: CCCCTGGTGCTTTGGACTTCCAAGTCTGTCTTCCCAGTCTAGGTCTTCCGCATAATCCACTTGGAGGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431485.2
CDS TCA 72 bp TTCTCCAGTTTCACCACAGGAATACCCAACTGCTGCTaGGGAGCTTCCGCCATCTCTGGATGCTCTTTAAGC +
Preference number: 6 (lower is better)
Translates to: FSSFTTGIPNCC*GASAISGCSLS
Trigger: GCTTAAAGAGCATCCAGAGATGGCGGAAGCTCCTCAGCAGCAGTTGGGTATTCCTGTGGTGAAACTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334715.7
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS TCA 72 bp TTTCCCAGTCATCCATCAGGGGGCTGTACCACAAAGTaGCCGAAATATGGCTGGAACCTCAAGGAAGCACGT +
Preference number: 6 (lower is better)
Translates to: FPSHPSGGCTTK*PKYGWNLKEAR
Trigger: ACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCACTTTGTGGTACAGCCCCCTGATGGATGACTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS GCA 72 bp GTGACCGAAATATGGCTGGAACCTCAAGGAAGCACGTaGGGTGCCAAATCACTTGGTGTCATTAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VTEIWLEPQGST*GAKSLGVIRAA
Trigger: TGCTGCTCTAATGACACCAAGTGATTTGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTTCGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS CAA 90 bp AAATATGGCTGGAACCTCAAGGAAGCACGTGCGGTGCCAAATCACTaGGTGTCATTAGAGCAGCACCAGAGAATTGTTACAGGAGCCCTA +
Preference number: 6 (lower is better)
Translates to: KYGWNLKEARAVPNH*VSLEQHQRIVTGAL
Trigger: TAGGGCTCCTGTAACAATTCTCTGGTGCTGCTCTAATGACACCAAGTGATTTGGCACCGCACGTGCTTCCTTGAGGTTCCAGCCATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS CAA 72 bp TGGAACCTCAAGGAAGCACGTGCGGTGCCAAATCACTaGGTGTCATTAGAGCAGCACCAGAGAATTGTTACA +
Preference number: 6 (lower is better)
Translates to: WNLKEARAVPNH*VSLEQHQRIVT
Trigger: TGTAACAATTCTCTGGTGCTGCTCTAATGACACCAAGTGATTTGGCACCGCACGTGCTTCCTTGAGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481424.5
CDS TCA 72 bp ATGGAACCTAAGAACAGTTCCCAACACCGATTAGAATaGGGCCTGGGCAAGGCTGTTATGAAGGGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: MEPKNSSQHRLE*GLGKAVMKGVE
Trigger: TTCAACTCCCTTCATAACAGCCTTGCCCAGGCCTCATTCTAATCGGTGTTGGGAACTGTTCTTAGGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481424.5
ENST00000485586.1
CDS TCA 72 bp GAGGAGACTGAGAATGACTGCATCAATGACCCCTCCTaGAACTCATATGCTGGTACAGCAGACAGAAAAAGT +
Preference number: 6 (lower is better)
Translates to: EETENDCINDPS*NSYAGTADRKS
Trigger: ACTTTTTCTGTCTGCTGTACCAGCATATGAGTTTCAGGAGGGGTCATTGATGCAGTCATTCTCAGTCTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394150.5
ENST00000394152.7
ENST00000431485.2
ENST00000481424.5
CDS TCA 72 bp GAAGTGAAAAGGAAGCTAAACTCATGCATCAGGCCCTaGGCAACTTTTATCTGTCCACGCCATTTGACAAGG +
Preference number: 6 (lower is better)
Translates to: EVKRKLNSCIRP*ATFICPRHLTR
Trigger: CCTTGTCAAATGGCGTGGACAGATAAAAGTTGCTCAGGGCCTGATGCATGAGTTTAGCTTCCTTTTCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481424.5
ENST00000485586.1
CDS TCA 72 bp ACATATTACTTTGGGGGATATGGTTTATCTGCCTACTaGAAAAGTATTCCTGCAAGTCAGCTGAATATTTCT +
Preference number: 6 (lower is better)
Translates to: TYYFGGYGLSAY*KSIPASQLNIS
Trigger: AGAAATATTCAGCTGACTTGCAGGAATACTTTTTCAGTAGGCAGATAAACCATATCCCCCAAAGTAATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485586.1