Pregenerated sensors for ZSCAN23 (Homo sapiens)
Ensembl gene IDs: ENSG00000187987Ensembl transcript IDs: ENST00000289788.4, ENST00000481983.5, ENST00000486481.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTaGAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTAT | + |
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Preference number: 1 (lower is better) Translates to: YSIHDEINTRGNIQY*KAVDVTDQRTRQMY Trigger: ATACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGTGTGGAGTCTCTGGTaGTGGAATAGGCCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: QGSKCKCLFQGASLIQPLVWSLW*WNRPDL Trigger: GAGGTCAGGCCTATTCCAGCACCAGAGACTCCACAC...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTGGAGTCTCTGGTGCTaGAATAGGCCTGACCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QGSKCKCLFQGASLIQPLWSLWC*NRPDLW Trigger: CCAGAGGTCAGGCCTATTCCAGCACCAGAGACTCCA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAATAGGGTCTCTCCACTaGAGAGCTCACCCTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: SKCKCLFQGASLIQPLGGIGSLH*RAHPLL Trigger: AAGCAAAGGGTGAGCTCTTCAGTGGAGAGACCCTAT...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGCCTGTGTGTGTTCTCTaGTGCTCGATAAGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: QGSKCKCLFQGASLIQPLPVCVL*CSIRME Trigger: TTCCATCCTTATCGAGCACCAGAGAACACACACAGG...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTTTGCTTTTCCAATCTaGCCTCACGGTCACAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: QGSKCKCLFQGASLIQPLFAFPI*PHGHRY Trigger: ATACCTGTGACCGTGAGGGCAGATTGGAAAAGCAAA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGACCATACTCAGGAATCTaGGTAATATTACCATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SKCKCLFQGASLIQPLGGPYSGI*VILPFC Trigger: ACAGAATGGTAATATTACTCAGATTCCTGAGTATGG...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAATAAGGATGGAATTCTaGGTGAAGCTTTTTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: SKCKCLFQGASLIQPLGGIRMEF*VKLFPH Trigger: ATGTGGAAAAAGCTTCACCCAGAATTCCATCCTTAT...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR-3UTR TCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTGTTATGAGGAGCCACTaGGCTGCTAATAACATATGG | + |
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Preference number: 2 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFVMRSH*AANNIW Trigger: CCATATGTTATTAGCAGCTCAGTGGCTCCTCATAAC...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| 3UTR-3UTR TCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTGAGCAATATTTGTTATaGGGAGCCACTGAGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFEQYLL*GATELL Trigger: TAGCAGCTCAGTGGCTCCTCATAACAAATATTGCTC...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| 3UTR-3UTR GCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTCTAATAACATATGGCTaGTTCAGTTCCTTGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFLITYG*FSSLVP Trigger: AGGAACCAAGGAACTGAAGCAGCCATATGTTATTAG...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| 3UTR CCA 72 bp | TCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTaGATGTCACTGATCAGAGAACTCGGCAGATGTATT | + |
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Preference number: 3 (lower is better) Translates to: STQEATFSIAKL*MSLIRELGRCI Trigger: AATACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| 3UTR TCA 72 bp | CCCTCACGGTCACAGGTATCTCCATACTCAGGAATCTaGGTAATATTACCATTCTGTTTTCCAAGAACTTGT | + |
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Preference number: 3 (lower is better) Translates to: PSRSQVSPYSGI*VILPFCFPRTC Trigger: ACAAGTTCTTGGAAAACAGAATGGTAATATTACTCAGATTCCTGAGTATGGAGATACCTGTGACCGTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR TCA 72 bp | CTTTTCTCTTATCTGTCAAATAAGAGCAAGCAGAAGTaGTCTCTAAGGTCCCTTAGAGTGATTCTGTTATTC | + |
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Preference number: 3 (lower is better) Translates to: LFSYLSNKSKQK*SLRSLRVILLF Trigger: GAATAACAGAATCACTCTAAGGGACCTTAGAGATCACTTCTGCTTGCTCTTATTTGACAGATAAGAGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGACCACTCACAGGACGGTaGTGTCTGACCCAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGPLTGR*CLTQAW Trigger: CCAGGCCTGGGTCAGACAGCACCGTCCTGTGAGTGG...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGAGATCGAGGCATCCGTaGGAGGAGATGCCACCTAGC | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLRSRHP*EEMPPS Trigger: GCTAGGTGGCATCTCCTCTCACGGATGCCTCGATCT...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTCCAAGTCCCAGCCTTaGCATCTGCTCTCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLSKSQP*HLLSWV Trigger: GACCCAGGAGAGCAGATGGCAAGGCTGGGACTTGGA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTGCAGATGCCTACAGTaGGTCTCAGGGCTCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLCRCLQ*VSGLQV Trigger: CACTTGGAGCCCTGAGACCCACTGTAGGCATCTGCA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| 3UTR CAA 72 bp | GGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTaGATTCAGCCACTGGGTGGACTTTCCGATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GSKCKCLFQGAS*IQPLGGLSDAG Trigger: TCCAGCATCGGAAAGTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGATCCAAGGAGCTAGCTTaGTTCAGCCACTGGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGSKELA*FSHWVD Trigger: GTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGA...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTCCACTCACAGGACGGTaGTGTCTGACCCAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCPLTGR*CLTQAW Trigger: CCAGGCCTGGGTCAGACAGCACCGTCCTGTGAGTGG...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAGTGTGGAGTCTCTGGTaGTGGAATAGGCCTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGVWSLW*WNRPDL Trigger: GAGGTCAGGCCTATTCCAGCACCAGAGACTCCACAC...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGCTGTTGTTTGCAGATaGCTACAGTGGGTCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLAVVCR*LQWVSG Trigger: CCCTGAGACCCACTGTAGGCATCTGCAAACAACAGC...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGATGGAGTCTCTGGTGCTaGAATAGGCCTGACCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGWSLWC*NRPDLW Trigger: CCAGAGGTCAGGCCTATTCCAGCACCAGAGACTCCA...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAATCCGTGAGAGGAGATaGCACCTAGCGCAGATCACA | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGIRERR*HLAQIT Trigger: TGTGATCTGCGCTAGGTGGCATCTCCTCTCACGGAT...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCCAATCTGCCCTCACGGTCACAGGTATCTCCATACTCAGGAATCTGAGTTGCATCTCTGCAGTCTaGAGGGTCAAGGTTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFQSALTVTGISILRNLSCISAV*RVKVMA Trigger: GGCCATAACCTTGACCCTTCAGACTGCAGAGATGCA...ACTCAGATTCCTGAGTATGGAGATACCTGTGACCGTGAGGGCAGATTGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAAGATCACATCTGCTCTaGATCCTTGACAACCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGRSHLL*ILDNRS Trigger: GCTGCGGTTGTCAAGGATTCAGAGCAGATGTGATCT...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGAGCGCAGATCACATCTaGTCTGAATCCTTGACAACC | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLSADHI*SESLTT Trigger: GGTTGTCAAGGATTCAGAGCAGATGTGATCTGCGCT...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAAGCATGGCTCAGGACCTaGTCTCCTGGGTCATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKAWLRT*SPGSSS Trigger: GCTGGATGACCCAGGAGAGCAGGTCCTGAGCCATGC...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAGGGTGGACTTTCCGATaGTGGATTAGGTTGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGGWTFR*WIRLQW Trigger: CCATTGCAACCTAATCCAGCATCGGAAAGTCCACCC...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGTTGTTGCTGTTGTTTaGAGATGCCTACAGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLVVAVV*RCLQWV Trigger: GACCCACTGTAGGCATCTGCAAACAACAGCAACAAC...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGCTTGATCTTTTCTTCTaGAAACCCCGAGATCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLLDLFF*KPRDRG Trigger: GCCTCGATCTCGGGGTTTCCAGAAGAAAAGATCAAG...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAGATTCAGCCACTGGGTaGACTTTCCGATGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGDSATG*TFRCWI Trigger: AATCCAGCATCGGAAAGTCCACCCAGTGGCTGAATC...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAGATAGCAGAACTGCCTaGAGCGTCTACGAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGDSRTA*SVYERS Trigger: AGATCTTTCGTAGACGCTTCAGGCAGTTCTGCTATC...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCCAATCTGCCCTCACGGTCACAGGTATCTCCATACTCAGGAATCTGAGTTCTGCTCTGAATCCTTaGCAACCGCAGCCCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LFQSALTVTGISILRNLSSALNP*QPQPKE Trigger: TTCTTTGGGCTGCGGTTGTCAAGGATTCAGAGCAGA...ACTCAGATTCCTGAGTATGGAGATACCTGTGACCGTGAGGGCAGATTGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTGTGTGGAGTCTCTGGTaGTGGAATAGGCCTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCVWSLW*WNRPDL Trigger: GAGGTCAGGCCTATTCCAGCACCAGAGACTCCACAC...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTTTGCCATCAATCTCTTaGACTGGGCACACCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCLPSIS*TGHTSR Trigger: GCGAGAGGTGTGCCCAGTTCAAGAGATTGATGGCAA...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAGATCGAGGCATCCGTaGGAGGAGATGCCACCTAGC | + |
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Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVRSRHP*EEMPPS Trigger: GCTAGGTGGCATCTCCTCTCACGGATGCCTCGATCT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTGATTCAGCCACTGGGTaGACTTTCCGATGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCDSATG*TFRCWI Trigger: AATCCAGCATCGGAAAGTCCACCCAGTGGCTGAATC...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTGATAGCAGAACTGCCTaGAGCGTCTACGAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCDSRTA*SVYERS Trigger: AGATCTTTCGTAGACGCTTCAGGCAGTTCTGCTATC...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGCCATACTCAGGAATCTaGGTAATATTACCATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLPYSGI*VILPFC Trigger: ACAGAATGGTAATATTACTCAGATTCCTGAGTATGG...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAATGCTTAATGAGGACTaGACGTCGACTAAAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGMLNED*TSTKTL Trigger: AAGAGTTTTAGTCGACGTTCAGTCCTCATTAAGCAT...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR GCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTAGCTGCTCCTGGAGTTaGCTTCTCCTTTACAAACTC | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCSCSWS*LLLYKL Trigger: GAGTTTGTAAAGGAGAAGGCAACTCCAGGAGCAGCT...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAAGGGTGGACTTTCCGATaGTGGATTAGGTTGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKGWTFR*WIRLQW Trigger: CCATTGCAACCTAATCCAGCATCGGAAAGTCCACCC...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGATAAGGATGGAATTCTaGGTGAAGCTTTTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: QGSKCKCLFQGASLIQPLIRMEF*VKLFPH Trigger: ATGTGGAAAAAGCTTCACCCAGAATTCCATCCTTAT...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTCCTGTGTGTGTTCTCTaGTGCTCGATAAGGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCPVCVL*CSIRME Trigger: TTCCATCCTTATCGAGCACCAGAGAACACACACAGG...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGTGGAGTCTCTGGTGCTaGAATAGGCCTGACCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVWSLWC*NRPDLW Trigger: CCAGAGGTCAGGCCTATTCCAGCACCAGAGACTCCA...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGTCCAAGGAGCTAGCTTaGTTCAGCCACTGGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKSKELA*FSHWVD Trigger: GTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGA...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGATCCGTGAGAGGAGATaGCACCTAGCGCAGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVIRERR*HLAQIT Trigger: TGTGATCTGCGCTAGGTGGCATCTCCTCTCACGGAT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTTTTGCTTTTCCAATCTaGCCTCACGGTCACAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCFAFPI*PHGHRY Trigger: ATACCTGTGACCGTGAGGGCAGATTGGAAAAGCAAA...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGATACGAAAGATCTCTCTaGTATGAGGGTTATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCKCLFQGASLIQPLGGYERSL*YEGYFL Trigger: CAAGAAATAACCCTCATACCAGAGAGATCTTTCGTA...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR TCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGAACTCTTCCTGTTCATaGGCATGGCTCAGGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKNSSCS*AWLRTC Trigger: GCAGGTCCTGAGCCATGCTCATGAACAGGAAGAGTT...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGATAGGGTCTCTCCACTaGAGAGCTCACCCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVIGSLH*RAHPLL Trigger: AAGCAAAGGGTGAGCTCTTCAGTGGAGAGACCCTAT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAAGAGCAATATTTGTTATaGGGAGCCACTGAGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKEQYLL*GATELL Trigger: TAGCAGCTCAGTGGCTCCTCATAACAAATATTGCTC...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTCCTGAGCTGCTCCTaGAGTTGCCTTCTCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKLLSCS*SCLLLY Trigger: GTAAAGGAGAAGGCAACTCCAGGAGCAGCTCAGGAG...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTTGCATCTCTGCAGTCTaGAGGGTCAAGGTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFCISAV*RVKVMA Trigger: GGCCATAACCTTGACCCTTCAGACTGCAGAGATGCA...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTTCATTTGATGACTCCTaGGCTGCTCCTGGAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFSFDDS*AAPGVA Trigger: GGCAACTCCAGGAGCAGCTCAGGAGTCATCAAATGA...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAAAATGGGTGGGTTTGTTaGGCAACTTCAGTGACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKNGWVC*ATSVTY Trigger: ATAAGTCACTGAAGTTGCTCAACAAACCCACCCATT...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGTCCTTCCTGCATCTCTaGAGTCTGAAGGGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKSFLHL*SLKGQG Trigger: ACCTTGACCCTTCAGACTGCAGAGATGCAGGAAGGA...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGCTTGATCTTTTCTTCTaGAAACCCCGAGATCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVLDLFF*KPRDRG Trigger: GCCTCGATCTCGGGGTTTCCAGAAGAAAAGATCAAG...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTAGTATTGCAAAGCTGTaGATGTCACTGATCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCSIAKL*MSLIRE Trigger: TTCTCTGATCAGTGACATCCACAGCTTTGCAATACT...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTAGCTGTGGATGTCACTaGTCAGAGAACTCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFSCGCH*SENSAD Trigger: ATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCT...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAAGAGCAAGCAGAAGTaGTCTCTAAGGTCCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVKSKQK*SLRSLR Trigger: TCTAAGGGACCTTAGAGATCACTTCTGCTTGCTCTT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGAGCGCAGATCACATCTaGTCTGAATCCTTGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKSADHI*SESLTT Trigger: GGTTGTCAAGGATTCAGAGCAGATGTGATCTGCGCT...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAATGCTCTTCCAAGGTTTaGAATTGGTCATTTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKCSSKV*NWSFDD Trigger: GTCATCAAATGACCAATTCCAAACCTTGGAAGAGCA...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTATAAGGATGGAATTCTaGGTGAAGCTTTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCIRMEF*VKLFPH Trigger: ATGTGGAAAAAGCTTCACCCAGAATTCCATCCTTAT...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAAGATCTCTCTGGTATaGGGGTTATTTCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVKISLV*GLFLDR Trigger: CCTGTCAAGAAATAACCCTCATACCAGAGAGATCTT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAACCATACTCAGGAATCTaGGTAATATTACCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKPYSGI*VILPFC Trigger: ACAGAATGGTAATATTACTCAGATTCCTGAGTATGG...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAATACGAAAGATCTCTCTaGTATGAGGGTTATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYWLSLELFYARGHSRDKYERSL*YEGYFL Trigger: CAAGAAATAACCCTCATACCAGAGAGATCTTTCGTA...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | ACATTCAGTATTGCAAAGCTGTGGATGTCACTGATCAGAGAACTCGGCAGATGTTATGTATTGGGTATTTaGGTGTATTCCAAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSIAKLWMSLIRELGRCYVLGI*VYSKPD Trigger: ATCTGGTTTGGAATACACCCAAATACCCAATACATA...ACATCTGCCGAGTTCTCTGATCAGTGACATCCACAGCTTTGCAATACTGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGTCAATGAGGAATAAATaGGAAGAGTCTTTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVSMRNK*EESFLD Trigger: GTCCAGGAAAGACTCTTCTCATTTATTCCTCATTGA...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGATGCTTAATGAGGACTaGACGTCGACTAAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKMLNED*TSTKTL Trigger: AAGAGTTTTAGTCGACGTTCAGTCCTCATTAAGCAT...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR TCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGGTAATTTTTATTTGGTaGTATAATGCCTCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVVIFIW*YNASSG Trigger: GCCACTGGAGGCATTATATCACCAAATAAAAATTAC...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTAATAACATATGGCTaGTTCAGTTCCTTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKLITYG*FSSLVP Trigger: AGGAACCAAGGAACTGAAGCAGCCATATGTTATTAG...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTATCAATCTCTTGAACTaGGCACACCTCTCGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFINLLN*AHLSQI Trigger: AATTTGCGAGAGGTGTGCCCAGTTCAAGAGATTGAT...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAGCTCTGCTTTTAACTaGCTGTATGATCTTAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVSSAFN*LYDLSY Trigger: GTAACTAAGATCATACAGCCAGTTAAAAGCAGAGCT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR GCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAAATTATACCCAAGTTaGTCTTCCAAGGTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVKLYPS*SSKVWN Trigger: ATTCCAAACCTTGGAAGAGCAACTTGGGTATAATTT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGATTGAAACATATAAATaGGTGGGTTTGTTGAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHDEINTRGNIQYCKAVIETYK*VGLLSN Trigger: GTTGCTCAACAAACCCACCCATTTATATGTTTCAAT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CCA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGTTACTTGCTATGTATTaGGTATTTGGGTGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STAYMMKSTQEATFSIAKLLAMY*VFGCIP Trigger: TGGAATACACCCAAATACCCAATACATAGCAAGTAA...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGATTCCAAGGAGCTAGCTaGATTCAGCCACTGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKCKCLFQGASLIQPLGGFQGAS*IQPLGG Trigger: TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAA...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGATCTGCTCTGAATCCTaGACAACCGCAGCCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSKCKCLFQGASLIQPLICSES*TTAAQR Trigger: TCTTTGGGCTGCGGTTGTCAAGGATTCAGAGCAGAT...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGAGAGAAATCTCCCTCTTaGGGGCTAACTCCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKCKCLFQGASLIQPLGGEKSPS*GLTPHS Trigger: GGAATGTGGAGTTAGCCCCAAAGAGGGAGATTTCTC...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTGTTGTTGCTGTTGTTaGCAGATGCCTACAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGSKCKCLFQGASLIQPLCCCCC*QMPTVG Trigger: ACCCACTGTAGGCATCTGCAAACAACAGCAACAACA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | TCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGGGTGGACATCCCACTTTGTTGTaGCTGTTGTTTGCAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKCKCLFQGASLIQPLGGHPTLL*LLFADA Trigger: GGCATCTGCAAACAACAGCAACAACAAAGTGGGATG...TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCCAATCTGCCCTCACGGTCACAGGTATCTCCATACTCAGGAATCTGAGTTATGAGGGTTATTTCTaGACAGGCCTGATTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFQSALTVTGISILRNLSYEGYF*TGLILA Trigger: GGCCAGAATCAGGCCTGTCAAGAAATAACCCTCATA...ACTCAGATTCCTGAGTATGGAGATACCTGTGACCGTGAGGGCAGATTGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS-3UTR CAA 90 bp | CAGGGCTCCAAGTGTAAGTGTCTGTTCCAAGGAGCTAGCTTGATTCAGCCACTGTCTTTCCATCCCACTTaGTTGTTGCTGTTGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGSKCKCLFQGASLIQPLSFHPT*LLLLFA Trigger: TGCAAACAACAGCAACAACAAAGTGGGATGGAAAGA...CAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGACACTTACACTTGGAGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481983.5 |
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| CDS TCA 90 bp | CCAAGTTGCTCTTCCAAGGTTTGGAATTGGTCATTTGATGACTCCTaGGCTGCTCCTGGAGTTGCCTTCTCCTTTACAAACTCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSCSSKVWNWSFDDS*AAPGVAFSFTNSSC Trigger: ACAGGAAGAGTTTGTAAAGGAGAAGGCAACTCCAGGAGCAGCTCAGGAGTCATCAAATGACCAATTCCAAACCTTGGAAGAGCAACTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000486481.1 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTTGCCATCAATCTCTaGAACTGGGCACACCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: STAYMMKSTQEATFSIAKLAINL*NWAHLS Trigger: CGAGAGGTGTGCCCAGTTCAAGAGATTGATGGCAAG...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
||
| CDS-3UTR CAA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGGAGAAATCTCCCTCTTaGGGGCTAACTCCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIHDEINTRGNIQYCKAVEKSPS*GLTPHS Trigger: GGAATGTGGAGTTAGCCCCAAAGAGGGAGATTTCTC...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
||
| CDS-3UTR CAA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGGAGCTGCTCCTGGAGTaGCCTTCTCCTTTACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: STAYMMKSTQEATFSIAKELLLE*PSPLQT Trigger: AGTTTGTAAAGGAGAAGGCAACTCCAGGAGCAGCTC...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
||
| CDS-3UTR CAA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTTTCCAAGGAGCTAGCTaGATTCAGCCACTGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFFQGAS*IQPLGG Trigger: TCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAA...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | TTTTACTGGCTTTCCCTTGAACTTTTCTATGCTAGAGGACACAGCAGGGACAAATATAAATGGGTGGGTTaGTTGAGCAACTTCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: FYWLSLELFYARGHSRDKYKWVG*LSNFSD Trigger: GTCACTGAAGTTGCTCAACAAACCCACCCATTTATA...TTTGTCCCTGCTGTGTCCTCTAGCATAGAAAAGTTCAAGGGAAAGCCAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGTATGAGGGTTATTTCTaGACAGGCCTGATTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: STAYMMKSTQEATFSIAKYEGYF*TGLILA Trigger: GGCCAGAATCAGGCCTGTCAAGAAATAACCCTCATA...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAGGCAACATTCAGTATaGCAAAGCTGTGGATGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SIHDEINTRGNIQYCKAVRQHSV*QSCGCH Trigger: GTGACATCCACAGCTTTGCAATACTGAATGTTGCCT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | AGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTGTGAAATGGGTGGGTTTGTaGAGCAACTTCAGTGACTTA | + |
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Preference number: 5 (lower is better) Translates to: SIHDEINTRGNIQYCKAVKWVGL*SNFSDL Trigger: TAAGTCACTGAAGTTGCTCAACAAACCCACCCATTT...CACAGCTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCAAATTATACCCAAGTaGCTCTTCCAAGGTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: STAYMMKSTQEATFSIAKQIIPK*LFQGLE Trigger: TTCCAAACCTTGGAAGAGCAACTTGGGTATAATTTG...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATACATGATGAAATCAACACAAGAGGCAACATTCAGTATTGCAAAGCTCGGTGAACTGCATTaGAGATTATTTTGTACTCAG | + |
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Preference number: 5 (lower is better) Translates to: STAYMMKSTQEATFSIAKLGELH*RLFCTQ Trigger: CTGAGTACAAAATAATCTCAAATGCAGTTCACCGAG...CTTTGCAATACTGAATGTTGCCTCTTGTGTTGATTTCATCATGTATGCTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTCTATGTATTGGGTATTaGGGTGTATTCCAAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFLCIGY*GVFQTR Trigger: TCTGGTTTGGAATACACCCAAATACCCAATACATAG...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS-3UTR CAA 90 bp | ATGTATTGGGTATTTGGGTGTATTCCAAACCAGATTGTTTTCACCATAGGTTTTGTTACTTGCTATGTATaGGGTATTTGGGTGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: MYWVFGCIPNQIVFTIGFVTCYV*GIWVYS Trigger: GGAATACACCCAAATACCCAATACATAGCAAGTAAC...AAAACCTATGGTGAAAACAATCTGGTTTGGAATACACCCAAATACCCAATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS GCA 72 bp | AGCATGGCTCAGGACCGAGGCATCCGTGAGAGGAGATaGCACCTAGCGCAGATCACATCTGCTCTGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: SMAQDRGIRERR*HLAQITSALNP Trigger: AGGATTCAGAGCAGATGTGATCTGCGCTAGGTGGCATCTCCTCTCACGGATGCCTCGGTCCTGAGCCATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486481.1 |
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| CDS GCA 72 bp | TGGAAACCCCGAGATCGAGGCATCCGTGAGAGGAGATaGCACCTAGCGCAGATCACATCTGCTCTGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: WKPRDRGIRERR*HLAQITSALNP Trigger: AGGATTCAGAGCAGATGTGATCTGCGCTAGGTGGCATCTCCTCTCACGGATGCCTCGATCTCGGGGTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000481983.5 |
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| CDS TCA 72 bp | GGAGTTGCCTTCTCCTTTACAAACTCTTCCTGTTCATaGGCATGGCTCAGGACCGAGGCATCCGTGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GVAFSFTNSSCS*AWLRTEASVRG Trigger: TCCTCTCACGGATGCCTCGGTCCTGAGCCATGCTCATGAACAGGAAGAGTTTGTAAAGGAGAAGGCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486481.1 |
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| CDS TCA 72 bp | GAAATATTATCCCCTACCTGTTCCAAGGAGCTAGCTTaGTTCAGCCACTGGGTGGACTTTCCGATGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EILSPTCSKELA*FSHWVDFPMLD Trigger: ATCCAGCATCGGAAAGTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGGTAGGGGATAATATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS CAA 72 bp | AGAAATATTATCCCCTACCTGTTCCAAGGAGCTAGCTaGATTCAGCCACTGGGTGGACTTTCCGATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RNIIPYLFQGAS*IQPLGGLSDAG Trigger: TCCAGCATCGGAAAGTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGGTAGGGGATAATATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS CAA 90 bp | AGGTTTGGAATTGGTCATTTGATGACTCCTGAGCTGCTCCTGGAGTaGCCTTCTCCTTTACAAACTCTTCCTGTTCATGAGCATGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RFGIGHLMTPELLLE*PSPLQTLPVHEHGS Trigger: TGAGCCATGCTCATGAACAGGAAGAGTTTGTAAAGGAGAAGGCAACTCCAGGAGCAGCTCAGGAGTCATCAAATGACCAATTCCAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000486481.1 |
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| CDS CAA 90 bp | GACAAAGTAAGAAATATTATCCCCTACCTGTTCCAAGGAGCTAGCTaGATTCAGCCACTGGGTGGACTTTCCGATGCTGGATTAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: DKVRNIIPYLFQGAS*IQPLGGLSDAGLGC Trigger: GCAACCTAATCCAGCATCGGAAAGTCCACCCAGTGGCTGAATCAAGCTAGCTCCTTGGAACAGGTAGGGGATAATATTTCTTACTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289788.4 |
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| CDS TCA 72 bp | TTCACTGCCAGAAGTCCTTCCTGCATCTCTGCAGTCTaGAGGGTCAAGGTTATGGCCATCAAAGGTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: FTARSPSCISAV*RVKVMAIKGLT Trigger: AGTTAAACCTTTGATGGCCATAACCTTGACCCTTCAGACTGCAGAGATGCAGGAAGGACTTCTGGCAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000481983.5 |
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| CDS CAA 72 bp | GTCTACGAAAGATCTCTCTGGTATGAGGGTTATTTCTaGACAGGCCTGATTCTGGCCCACAGGAATGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VYERSLWYEGYF*TGLILAHRNVP Trigger: AGGAACATTCCTGTGGGCCAGAATCAGGCCTGTCAAGAAATAACCCTCATACCAGAGAGATCTTTCGTAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000481983.5 |
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| CDS TCA 72 bp | TCTTCCAAGGTTTGGAATTGGTCATTTGATGACTCCTaGGCTGCTCCTGGAGTTGCCTTCTCCTTTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSKVWNWSFDDS*AAPGVAFSFTN Trigger: GTTTGTAAAGGAGAAGGCAACTCCAGGAGCAGCTCAGGAGTCATCAAATGACCAATTCCAAACCTTGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289788.4 ENST00000486481.1 |
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| CDS CAA 72 bp | ATGCCACCTAGCGCAGATCACATCTGCTCTGAATCCTaGACAACCGCAGCCCAAAGAATGATAAACTACAAA | + |
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Preference number: 6 (lower is better) Translates to: MPPSADHICSES*TTAAQRMINYK Trigger: TTTGTAGTTTATCATTCTTTGGGCTGCGGTTGTCAAGGATTCAGAGCAGATGTGATCTGCGCTAGGTGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486481.1 |
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| CDS CAA 90 bp | ATACTCAGGAATCTGAGTAATATTACCATTCTGTTTTCCAAGAACTaGTATAAGAGATTTCACTTCCTGAGAAATCTCCCTCTTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ILRNLSNITILFSKN*YKRFHFLRNLPLWG Trigger: GCCCCAAAGAGGGAGATTTCTCAGGAAGTGAAATCTCTTATACAAGTTCTTGGAAAACAGAATGGTAATATTACTCAGATTCCTGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000289788.4 ENST00000481983.5 ENST00000486481.1 |
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