RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN22 (Homo sapiens)

Ensembl gene IDs: ENSG00000182318

Ensembl transcript IDs: ENST00000329665.5

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCTCAGAACCAGTCTAAATCCTCAGTTCGGCTGCCTTCTCTCTaGGACAGCCCTGAGTGGGAAATAGAGGGTAGCAGTGCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: GPQNQSKSSVRLPSL*DSPEWEIEGSSAGP
Trigger: GGGCCCTGCACTGCTACCCTCTATTTCCCACTCAGGGCTGTCCCAGAGAGAAGGCAGCCGAACTGAGGATTTAGACTGGTTCTGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 90 bp AGCCTGTCATCCCTCTCAGTCTCTCAGCCTCTGGCACACGATATGTaGCCCTCTCTGCCTGTGTCTGGGACTCCCTCAGAGATACTTCCA +
Preference number: 1 (lower is better)
Translates to: SLSSLSVSQPLAHDM*PSLPVSGTPSEILP
Trigger: TGGAAGTATCTCTGAGGGAGTCCCAGACACAGGCAGAGAGGGCCACATATCGTGTGCCAGAGGCTGAGAGACTGAGAGGGATGACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp GAGGGTAGCAGTGCAGGGCCCTTCTGGAAGCTTCTCCAGCTGGCCTaGATCACCTTGTGCTCATCAGGGTTCCTCAAATGCAGAGTGGTT +
Preference number: 1 (lower is better)
Translates to: EGSSAGPFWKLLQLA*ITLCSSGFLKCRVV
Trigger: AACCACTCTGCATTTGAGGAACCCTGATGAGCACAAGGTGATTCAGGCCAGCTGGAGAAGCTTCCAGAAGGGCCCTGCACTGCTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 90 bp CCCTCTCAGTCTCTCAGCCTCTGGCACACGATATGTGGCCCTCTCTaGCTGTGTCTGGGACTCCCTCAGAGATACTTCCACAAAGTCTCT +
Preference number: 1 (lower is better)
Translates to: PSQSLSLWHTICGPL*LCLGLPQRYFHKVS
Trigger: AGAGACTTTGTGGAAGTATCTCTGAGGGAGTCCCAGACACAGGCAGAGAGGGCCACATATCGTGTGCCAGAGGCTGAGAGACTGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp TTAGGTCCCAAAAGTAGCCACAGGGAGGAGTCAGGCTCTGCAGCCTaGATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCTGGAA +
Preference number: 1 (lower is better)
Translates to: LGPKSSHREESGSAA*IQAHAFSVPSSMLE
Trigger: TTCCAGCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTGACTCCTCCCTGTGGCTACTTTTGGGACCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 90 bp TACATAAGGACAATGTGGGGCAGAGACAGCACGGTGACTGCCTCCTaGGGGCACCAGTCACATTCATGTAAGAGACATCAGTCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: YIRTMWGRDSTVTAS*GHQSHSCKRHQSGP
Trigger: AGGCCCTGACTGATGTCTCTTACATGAATGTGACTGGTGCCCCCAGGAGGCAGTCACCGTGCTGTCTCTGCCCCACATTGTCCTTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp GTGGTTCCTAGACAGCCCGAGTCTGCCCTCAGGCACCTATCATTTTaGCAACTCATCAATCACCCACCCTGTCTGTGGCTCTTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: VVPRQPESALRHLSF*QLINHPPCLWLFRN
Trigger: GTTCCTGAAGAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATGATAGGTGCCTGAGGGCAGACTCGGGCTGTCTAGGAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 90 bp AGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTaGCAAGGCACAGAGGTGGGCATGGCAGGTGTCCGTTCTGGGCTA +
Preference number: 1 (lower is better)
Translates to: SLAVRHKIVWSGNSR*QGTEVGMAGVRSGL
Trigger: TAGCCCAGAACGGACACCTGCCATGCCCACCTCTGTGCCTTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTaGTTTACATATGAGGAGGTCATGGAGGTTCAGGAAAGTCACTTA +
Preference number: 1 (lower is better)
Translates to: GPGFGSGTTQGGSCP*FTYEEVMEVQESHL
Trigger: TAAGTGACTTTCCTGAACCTCCATGACCTCCTCATATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 90 bp TGGCCTGAATCACCTTGTGCTCATCAGGGTTCCTCAAATGCAGAGTaGTTCCTAGACAGCCCGAGTCTGCCCTCAGGCACCTATCATTTT +
Preference number: 1 (lower is better)
Translates to: WPESPCAHQGSSNAE*FLDSPSLPSGTYHF
Trigger: AAAATGATAGGTGCCTGAGGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGCACAAGGTGATTCAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp AAAGGAGAGACAGGAACATGCTGGGCAGGTGTCAAGCAGCACCACTaGTTACGACAGGAAACCATGAGAGAGGCAGAGTGTAGAAAAGGC +
Preference number: 1 (lower is better)
Translates to: KGETGTCWAGVKQHH*LRQETMREAECRKG
Trigger: GCCTTTTCTACACTCTGCCTCTCTCATGGTTTCCTGTCGTAATCAGTGGTGCTGCTTGACACCTGCCCAGCATGTTCCTGTCTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp TGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATaGGGAGGTCATGGAGGTTCAGGAAAGTCACTTATCTTAGGTCCC +
Preference number: 1 (lower is better)
Translates to: WVRHYTRWVLSLVYI*GGHGGSGKSLILGP
Trigger: GGGACCTAAGATAAGTGACTTTCCTGAACCTCCATGACCTCCTCATATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 90 bp ACGCACAGAAAAATGACAGTATTCATACATGCATATGAGGATAACTaGAGAGGTTGCTCGGGGCCCAGAGCAGCCTGCATCTCAGCATAC +
Preference number: 1 (lower is better)
Translates to: THRKMTVFIHAYEDN*RGCSGPRAACISAY
Trigger: GTATGCTGAGATGCAGGCTGCTCTGGGCCCCGAGCAACCTCTCCAGTTATCCTCATATGCATGTATGAATACTGTCATTTTTCTGTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp AGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGAGATaGGGCCATTTTCACTGCACGCACAGAAAAATGACAGTATTCATA +
Preference number: 1 (lower is better)
Translates to: SSVWLVYGRWSHGMR*GHFHCTHRKMTVFI
Trigger: TATGAATACTGTCATTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp GTCTGGGACTCCCTCAGAGATACTTCCACAAAGTCTCTGTCTCCCTaGGTCTTACCTTCATGTTATGAACGTTTCTCATCAGTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: VWDSLRDTSTKSLSP*VLPSCYERFSSVSV
Trigger: CACAGAGACTGATGAGAAACGTTCATAACATGAAGGTAAGACTCAGGGAGACAGAGACTTTGTGGAAGTATCTCTGAGGGAGTCCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 90 bp CCTTTTAGACAGACATGGACAGATATGTCTCAACGACCAAATGGGTaGAGATGCTCAGAGCATCAAGGGGATGGAGATCCAGTTCTTGTG +
Preference number: 1 (lower is better)
Translates to: PFRQTWTDMSQRPNG*RCSEHQGDGDPVLV
Trigger: CACAAGAACTGGATCTCCATCCCCTTGATGCTCTGAGCATCTTCACCCATTTGGTCGTTGAGACATATCTGTCCATGTCTGTCTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAGGAGGAGTCAGGCTCTaGAGCCTGAATTCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTGGVRL*SLNSGP
Trigger: TGGGCCTGAATTCAGGCTGCAGAGCCTGACTCCTCC...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGGCACAGAGGTGGGCATaGCAGGTGTCCGTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMAQRWA*QVSVLG
Trigger: GCCCAGAACGGACACCTGCCATGCCCACCTCTGTGC...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAAATCCTCAGTTCGGCTaGCTTCTCTCTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTNPQFG*LLSGTA
Trigger: GGCTGTCCCAGAGAGAAGGCAGCCGAACTGAGGATT...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAGTAGTTCCGTGTGGCTaGTGTATGGAAGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTVVPCG*CMEGGA
Trigger: GGCTCCACCTTCCATACACCAGCCACACGGAACTAC...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCCTGGCACACGATATGTaGCCCTCTCTGCCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: QALQPEFRPMPFLFPPACLAHDM*PSLPVS
Trigger: AGACACAGGCAGAGAGGGCCACATATCGTGTGCCAG...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAGCAGAGACAGCACGGTaGCTGCCTCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQAETAR*LPPGGT
Trigger: GGTGCCCCCAGGAGGCAGTCACCGTGCTGTCTCTGC...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGACATGCGCCTTCATTTaGCCTGGCCCTCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMTCAFI*PGPQNQ
Trigger: CTGGTTCTGAGGGCCAGGGCAAATGAAGGCGCATGT...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGCGGCTGCCTTCTCTCTaGGACAGCCCTGAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLRLPSL*DSPEWE
Trigger: TTCCCACTCAGGGCTGTCCCAGAGAGAAGGCAGCCG...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGAATAAAGGCAGGAAGTaGTCAGGAAGGAGACCCCGG +
Preference number: 2 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMNKGRK*SGRRPR
Trigger: CCGGGGTCTCCTTCCTGACCACTTCCTGCCTTTATT...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACACAGGGTTCAAGCTGCTaGGGAGACATCCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTQGSSC*GDIHVN
Trigger: GTTTACATGGATGTCTCCCCAGCAGCTTGAACCCTG...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCCTCTCTGCCTGTGTCTaGGACTCCCTCAGAGATACT +
Preference number: 2 (lower is better)
Translates to: QALQPEFRPMPFLFPPACLSACV*DSLRDT
Trigger: AGTATCTCTGAGGGAGTCCCAGACACAGGCAGAGAG...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGAGCGTCTTGGGACGCTaGGTTCTGAGAGACATGCGC +
Preference number: 2 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLSVLGR*VLRDMR
Trigger: GCGCATGTCTCTCAGAACTCAGCGTCCCAAGACGCT...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCGCAAGAAGAACCACATaGGAACAAGCTACAGTTGGC +
Preference number: 2 (lower is better)
Translates to: QALQPEFRPMPFLFPPACARRTT*EQATVG
Trigger: GCCAACTGTAGCTTGTTCTCATGTGGTTCTTCTTGC...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGTCCTCAAATGCAGAGTaGTTCCTAGACAGCCCGAGT +
Preference number: 2 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMSSNAE*FLDSPS
Trigger: ACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGA...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGAGCGCTGGTGACTGGTaGGATGTGGAAGGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVSAGDW*DVEGKG
Trigger: TCCTTTTCCTTCCACATCCCACCAGTCACCAGCGCT...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATTCCCTCCAGCATGCTaGAAGCCTGTGCAATTTCAC +
Preference number: 2 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIFPPAC*KPVQFH
Trigger: GTGAAATTGCACAGGCTTCCAGCATGCTGGAGGGAA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGTGGGACGCTGAGTTCTaGGAGACATGCGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLWDAEF*ETCAFI
Trigger: AATGAAGGCGCATGTCTCTCAGAACTCAGCGTCCCA...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAAAGTGCAGGGCCCTTCTaGAAGCTTCTCCAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQSAGPF*KLLQLA
Trigger: GGCCAGCTGGAGAAGCTTCCAGAAGGGCCCTGCACT...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCAGGCACCTATCATTTTaGCAACTCATCAATCACCCA +
Preference number: 2 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPRHLSF*QLINHP
Trigger: TGGGTGATTGATGAGTTGTCAAAATGATAGGTGCCT...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGTCAGGGTTCCTCAAATaGAGAGTGGTTCCTAGACAG +
Preference number: 2 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVSGFLK*RVVPRQ
Trigger: CTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGA...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCAACACATGGACAGAATaGTGGCAAAGACTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: QALQPEFRPMPFLFPPACNTWTE*WQRLSP
Trigger: TGGACTTAGTCTTTGCCAGCATTCTGTCCATGTGTT...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAGCATATGAGGATAACTaGAGAGGTTGCTCGGGGCCC +
Preference number: 2 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKAYEDN*RGCSGP
Trigger: GGGCCCCGAGCAACCTCTCCAGTTATCCTCATATGC...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGTACATAAGGACAATGTaGGGCAGAGACAGCACGGTG +
Preference number: 2 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLYIRTM*GRDSTV
Trigger: CACCGTGCTGTCTCTGCCCCACATTGTCCTTATGTA...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAAGAACAAGCTACAGTTaGCCCGCCCAGAGCGTCTTG +
Preference number: 2 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQRTSYS*PAQSVL
Trigger: CAAGACGCTCTGGGCGGGCCAACTGTAGCTTGTTCT...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GAGCCATGGTATGAGATGAGGCCATTTTCACTGCACGCACAGAAAAATGACAGTGGCAGGTGTCCGTTCTaGGCTAAGCAGCAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: EPWYEMRPFSLHAQKNDSGRCPF*AKQQKS
Trigger: GCTTTTCTGCTGCTTAGCCCAGAACGGACACCTGCC...ACTGTCATTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCATATCAAGAGTCCCCTaGAGAGTGATACAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGISRVP*RVIQGQ
Trigger: CTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAATACGCCAGGTCAAATaGTTCACATATGATGAGACC +
Preference number: 2 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIIRQVK*FTYDET
Trigger: GGTCTCATCATATGTGAACCATTTGACCTGGCGTAT...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCTACGACAGGAAACCATaGGAGAGGCAGAGTGTAGAA +
Preference number: 2 (lower is better)
Translates to: SSMLEACAISLGMCISPLYDRKP*ERQSVE
Trigger: TTCTACACTCTGCCTCTCTCATGGTTTCCTGTCGTA...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCTTGAAACACCTTAGATaGAAAAGGAGGGCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: SSMLEACAISLGMCISPLLKHLR*KRRARC
Trigger: GCACCTGGCCCTCCTTTTTCATCTAAGGTGTTTCAA...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR GCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAAGTGGAAATAGTAGGTaGCAAGGCACAGAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQSGNSR*QGTEVG
Trigger: GCCCACCTCTGTGCCTTGGCACCTACTATTTCCACT...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGAGGCACAAAATAGTCTaGAGTGGAAATAGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQRHKIV*SGNSRC
Trigger: GCACCTACTATTTCCACTCCAGACTATTTTGTGCCT...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAACTGAGAGTAAGACATaGCCCCTGCTCTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQTESKT*PLLSGV
Trigger: AACTCCTGAGAGCAGGGGCCATGTCTTACTCTCAGT...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR TCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCGCACGCACAGAAAAATaGCAGTATTCATACATGCAT +
Preference number: 2 (lower is better)
Translates to: SSMLEACAISLGMCISPLARTEK*QYSYMH
Trigger: ATGCATGTATGAATACTGTCATTTTTCTGTGCGTGC...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 72 bp GAGGTGCTCTGGAAGCAGAGAGGGCAAGCTGAAGTCTaGTCCCGGAGAGCAGGGAGGTTTCTTTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: EVLWKQRGQAEV*SRRAGRFLWAT
Trigger: TGTTGCCCAAAGAAACCTCCCTGCTCTCCGGGAGCAGACTTCAGCTTGCCCTCTCTGCTTCCAGAGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp CCAAGGCACAGAGGTGGGCATGGCAGGTGTCCGTTCTaGGCTAAGCAGCAGAAAAGCAGGCAAGAAGAACCA +
Preference number: 3 (lower is better)
Translates to: PRHRGGHGRCPF*AKQQKSRQEEP
Trigger: TGGTTCTTCTTGCCTGCTTTTCTGCTGCTTAGCCCAGAACGGACACCTGCCATGCCCACCTCTGTGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp AGTGCAGGGCCCTTCTGGAAGCTTCTCCAGCTGGCCTaGATCACCTTGTGCTCATCAGGGTTCCTCAAATGC +
Preference number: 3 (lower is better)
Translates to: SAGPFWKLLQLA*ITLCSSGFLKC
Trigger: GCATTTGAGGAACCCTGATGAGCACAAGGTGATTCAGGCCAGCTGGAGAAGCTTCCAGAAGGGCCCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp AAAAGTAGCCACAGGGAGGAGTCAGGCTCTGCAGCCTaGATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: KSSHREESGSAA*IQAHAFSVPSS
Trigger: GCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTGACTCCTCCCTGTGGCTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 72 bp AGAGGTGCTGATGATTGCTGTGAGTCAGAGACAGTGTaGAGGGCCAGGCTTTGGGTCAGGCACTACACAAGG +
Preference number: 3 (lower is better)
Translates to: RGADDCCESETV*RARLWVRHYTR
Trigger: CCTTGTGTAGTGCCTGACCCAAAGCCTGGCCCTGCACACTGTCTCTGACTCACAGCAATCATCAGCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp ACAATGTGGGGCAGAGACAGCACGGTGACTGCCTCCTaGGGGCACCAGTCACATTCATGTAAGAGACATCAG +
Preference number: 3 (lower is better)
Translates to: TMWGRDSTVTAS*GHQSHSCKRHQ
Trigger: CTGATGTCTCTTACATGAATGTGACTGGTGCCCCCAGGAGGCAGTCACCGTGCTGTCTCTGCCCCACATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp AGACAGCCCGAGTCTGCCCTCAGGCACCTATCATTTTaGCAACTCATCAATCACCCACCCTGTCTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: RQPESALRHLSF*QLINHPPCLWL
Trigger: GAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATGATAGGTGCCTGAGGGCAGACTCGGGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 72 bp GATAACTGGAGAGGTTGCTCGGGGCCCAGAGCAGCCTaGATCTCAGCATACTTATACCCTGTTCAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: DNWRGCSGPRAA*ISAYLYPVQEA
Trigger: AGCTTCCTGAACAGGGTATAAGTATGCTGAGATGCAGGCTGCTCTGGGCCCCGAGCAACCTCTCCAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CAA 90 bp AGAAAAGGCATCGTGGAAGAGGCAGTCTCAAAAGTCAGCCTTGCAGTTAGGCACGAGAACAAGCTACAGTaGGCCCGCCCAGAGCGTCTT +
Preference number: 3 (lower is better)
Translates to: RKGIVEEAVSKVSLAVRHENKLQ*ARPERL
Trigger: AAGACGCTCTGGGCGGGCCAACTGTAGCTTGTTCTC...GTGCCTAACTGCAAGGCTGACTTTTGAGACTGCCTCTTCCACGATGCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp ACAGGAACATGCTGGGCAGGTGTCAAGCAGCACCACTaGTTACGACAGGAAACCATGAGAGAGGCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: TGTCWAGVKQHH*LRQETMREAEC
Trigger: ACACTCTGCCTCTCTCATGGTTTCCTGTCGTAATCAGTGGTGCTGCTTGACACCTGCCCAGCATGTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp CTCCCGGAGAGCAGGGAGGTTTCTTTGGGCAACATTTaGAACACCTTAGATGAAAAAGGAGGGCCAGGTGCG +
Preference number: 3 (lower is better)
Translates to: LPESREVSLGNI*NTLDEKGGPGA
Trigger: CGCACCTGGCCCTCCTTTTTCATCTAAGGTGTTTCAAATGTTGCCCAAAGAAACCTCCCTGCTCTCCGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 72 bp AAGGTGGCAGGAGTTGTAAGAGAGGTATCTAGGAGGTaGTCTGGAAGCAGAGAGGGCAAGCTGAAGTCTGCT +
Preference number: 3 (lower is better)
Translates to: KVAGVVREVSRR*SGSREGKLKSA
Trigger: AGCAGACTTCAGCTTGCCCTCTCTGCTTCCAGAGCACCTCCTAGATACCTCTCTTACAACTCCTGCCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp ATGTATGGCTCCTTCAGGGACCACAGTAGTTCCGTGTaGCTGGTGTATGGAAGGTGGAGCCATGGTATGAGA +
Preference number: 3 (lower is better)
Translates to: MYGSFRDHSSSV*LVYGRWSHGMR
Trigger: TCTCATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGGAGCCATACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp CCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATaGGATGAGGCCATTTTCACTGCACGCACAGAAAAA +
Preference number: 3 (lower is better)
Translates to: PCGWCMEGGAMV*DEAIFTARTEK
Trigger: TTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTCCACCTTCCATACACCAGCCACACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp TTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTaGTTTACATATGAGGAGGTCATGGAGGTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: FGSGTTQGGSCP*FTYEEVMEVQE
Trigger: TTCCTGAACCTCCATGACCTCCTCATATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR-3UTR CAA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGCAGGCACCTATCATTTaGACAACTCATCAATCACCC +
Preference number: 3 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVQAPII*TTHQSP
Trigger: GGGTGATTGATGAGTTGTCAAAATGATAGGTGCCTG...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp TGGCTGGTGTATGGAAGGTGGAGCCATGGTATGAGATaGGGCCATTTTCACTGCACGCACAGAAAAATGACA +
Preference number: 3 (lower is better)
Translates to: WLVYGRWSHGMR*GHFHCTHRKMT
Trigger: TGTCATTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTCCACCTTCCATACACCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp CACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATaGGGAGGTCATGGAGGTTCAGGAAAGTCACTTATC +
Preference number: 3 (lower is better)
Translates to: HYTRWVLSLVYI*GGHGGSGKSLI
Trigger: GATAAGTGACTTTCCTGAACCTCCATGACCTCCTCATATGTAAACCAGGGACAGGACCCACCTTGTGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp CAGACATGGACAGATATGTCTCAACGACCAAATGGGTaGAGATGCTCAGAGCATCAAGGGGATGGAGATCCA +
Preference number: 3 (lower is better)
Translates to: QTWTDMSQRPNG*RCSEHQGDGDP
Trigger: TGGATCTCCATCCCCTTGATGCTCTGAGCATCTTCACCCATTTGGTCGTTGAGACATATCTGTCCATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR GCA 72 bp GCATCTCAGCATACTTATACCCTGTTCAGGAAGCTGTaGTGTAGAAGATGGGTTGGAGAGCTTTCCACCTTG +
Preference number: 3 (lower is better)
Translates to: ASQHTYTLFRKL*CRRWVGELSTL
Trigger: CAAGGTGGAAAGCTCTCCAACCCATCTTCTACAGCACAGCTTCCTGAACAGGGTATAAGTATGCTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp AAAATGACAGTATTCATACATGCATATGAGGATAACTaGAGAGGTTGCTCGGGGCCCAGAGCAGCCTGCATC +
Preference number: 3 (lower is better)
Translates to: KMTVFIHAYEDN*RGCSGPRAACI
Trigger: GATGCAGGCTGCTCTGGGCCCCGAGCAACCTCTCCAGTTATCCTCATATGCATGTATGAATACTGTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp GTGGGTCCTGTCCCTGGTTTACATATGAGGAGGTCATaGAGGTTCAGGAAAGTCACTTATCTTAGGTCCCAA +
Preference number: 3 (lower is better)
Translates to: VGPVPGLHMRRS*RFRKVTYLRSQ
Trigger: TTGGGACCTAAGATAAGTGACTTTCCTGAACCTCCATGACCTCCTCATATGTAAACCAGGGACAGGACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp ACGTTTCTCATCAGTCTCTGTGCCTCTATTTACTCTTaGCATAGAGGGAATGGGCCCGAAATACAGGGAGAT +
Preference number: 3 (lower is better)
Translates to: TFLISLCASIYS*HRGNGPEIQGD
Trigger: ATCTCCCTGTATTTCGGGCCCATTCCCTCTATGTCAAGAGTAAATAGAGGCACAGAGACTGATGAGAAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp GACATGGCCCCTGCTCTCAGGAGTTTATGGTATCCTTaGAAAAGGCAGCTCTACAAGGAGCAAATAAGTAAA +
Preference number: 3 (lower is better)
Translates to: DMAPALRSLWYP*KRQLYKEQISK
Trigger: TTTACTTATTTGCTCCTTGTAGAGCTGCCTTTTCCAAGGATACCATAAACTCCTGAGAGCAGGGGCCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp TCCCTCAGAGATACTTCCACAAAGTCTCTGTCTCCCTaGGTCTTACCTTCATGTTATGAACGTTTCTCATCA +
Preference number: 3 (lower is better)
Translates to: SLRDTSTKSLSP*VLPSCYERFSS
Trigger: TGATGAGAAACGTTCATAACATGAAGGTAAGACTCAGGGAGACAGAGACTTTGTGGAAGTATCTCTGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR TCA 72 bp TCCTCCTCTATAAAACAGGGATGGTTGTGTGAGGACTaGGATGTATATAAATTATTTGGTAGACTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: SSSIKQGWLCED*DVYKLFGRLGS
Trigger: GCTGCCCAGTCTACCAAATAATTTATATACATCTCAGTCCTCACACAACCATCCCTGTTTTATAGAGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CCA 72 bp AATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTaGGGAGACATCCATGTAAACATACATAAGGACAAT +
Preference number: 3 (lower is better)
Translates to: NQIILALQGSSC*GDIHVNIHKDN
Trigger: ATTGTCCTTATGTATGTTTACATGGATGTCTCCCCAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAGGGCTGAGCAGTCGCTaGAGGCTCGGCCACACGCGT +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIGLSSR*RLGHTR
Trigger: ACGCGTGTGGCCGAGCCTTCAGCGACTGCTCAGCCC...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGGCTCAGGGAGTGCTTaGGGATGGCCATCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMGSGSA*GWPSGS
Trigger: GCTGCCCGATGGCCATCCCCAAGCACTCCCTGAGCC...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATCCGAGAAGACGCTGTaGTACGCCCCCAGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYISEKTL*YAPRGD
Trigger: GTCGCCCCTGGGGGCGTAGCACAGCGTCTTCTCGGA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGGGAGTGCTTGGGGATaGCCATCGGGCAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMGSAWG*PSGSSA
Trigger: AGCACTGCTGCCCGATGGCCATCCCCAAGCACTCCC...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAGCTCCCACCCAGGCTTaGATCTCTGGGGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIAPTQA*ISGGSA
Trigger: TGCGCTGCCCCCAGAGATCCAAGCCTGGGTGGGAGC...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGCCGCTCTTGGGACTCTaGGCTCCCACCCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMPLLGL*APTQAW
Trigger: CCAAGCCTGGGTGGGAGCCCAGAGTCCCAAGAGCGG...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAGATTCACGGCCACGCTaGTCTGTGGGGACATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTDSRPR*SVGTSL
Trigger: CAAGGATGTCCCCACAGACCAGCGTGGCCGTGAATC...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAGCACAGAGGTGGGCATaGCAGGTGTCCGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIAQRWA*QVSVLG
Trigger: GCCCAGAACGGACACCTGCCATGCCCACCTCTGTGC...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGCTCTTGTCCAGCACCTaGGTCAGATCCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMLLSST*VRSSTS
Trigger: GCTGGTGGAGGATCTGACTCAGGTGCTGGACAAGAG...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGCAGGTTCACATGCCTTaGCAAAGGCGGGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMQVHMP*QRRVQG
Trigger: CCCTTGGACCCGCCTTTGTCAAGGCATGTGAACCTG...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGACTGGGCTCAGGGAGTaGTTGGGGATGGCCATCGGG +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQTGLRE*LGMAIG
Trigger: CCCGATGGCCATCCCCAAGCACTCCCTGAGCCCAGT...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAGAGGGAGGAGCTCTGTaGAAAGGCCTTCGGACAAAC +
Preference number: 4 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTEGGAL*KGLRTN
Trigger: GTTTGTCCGAAGGCCTTTGCACAGAGCTCCTCCCTC...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCTGTGGGCTCGGCTCCTaGATCCCATCCTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPCGLGS*IPSSLV
Trigger: GACAAGAGAGGATGGGATCCAGGAGCCGAGCCCACA...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGCGAGAATGGGTCTTCTaGTGTGCCTCGAGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMREWVF*CASSAE
Trigger: TTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCG...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGATGTCGGATCAGGGCTaGGCAGTCGCTGAAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVMSDQG*AVAEGS
Trigger: CGAGCCTTCAGCGACTGCTCAGCCCTGATCCGACAT...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCCAAAGACTAAGTCCATaGCACCAGGGGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QALQPEFRPMPFLFPPACQRLSP*HQGIWG
Trigger: GCCCCAGATCCCCTGGTGTCATGGACTTAGTCTTTG...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAGCCCTCAGGTTCACATaGCTTGACAAAGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIALRFT*LDKGGS
Trigger: GGACCCGCCTTTGTCAAGGCATGTGAACCTGAGGGC...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCCAGACCTCTCTGAGCTaGCCTCAGGTTCACATGCCT +
Preference number: 4 (lower is better)
Translates to: QALQPEFRPMPFLFPPACQTSLS*PQVHMP
Trigger: AGGCATGTGAACCTGAGGGCAGCTCAGAGAGGTCTG...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCGAGGTATCTAGGAGGTaGTCTGGAAGCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPEVSRR*SGSREG
Trigger: GCCCTCTCTGCTTCCAGAGCACCTCCTAGATACCTC...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCATATGTGGCCCTCTCTaGCTGTGTCTGGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: QALQPEFRPMPFLFPPACICGPL*LCLGLP
Trigger: AGGGAGTCCCAGACACAGGCAGAGAGGGCCACATAT...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCAGAACAAGCTACAGTTaGCCCGCCCAGAGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPRTSYS*PAQSVL
Trigger: CAAGACGCTCTGGGCGGGCCAACTGTAGCTTGTTCT...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACACGGTGACTGCCTCCTaGGGGCACCAGTCACATTCA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYTVTAS*GHQSHS
Trigger: TGAATGTGACTGGTGCCCCCAGGAGGCAGTCACCGT...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCCAGTCTCTCAGCCTCTaGCACACGATATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPQSLSL*HTICGP
Trigger: AGGGCCACATATCGTGTGCCAGAGGCTGAGAGACTG...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACAAGCCATGGTATGAGATaGGGCCATTTTCACTGCACG +
Preference number: 4 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTSHGMR*GHFHCT
Trigger: CGTGCAGTGAAAATGGCCTCATCTCATACCATGGCT...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAAGCAGAGACAGCACGGTaGCTGCCTCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQAETAR*LPPGGT
Trigger: GGTGCCCCCAGGAGGCAGTCACCGTGCTGTCTCTGC...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATCAGGCTCTGCAGCCTaGATTCAGGCCCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYISGSAA*IQAHAF
Trigger: AAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTGA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGGCCATCGGGCAGCAGTaGTCAGTGAGACACAGGATG +
Preference number: 4 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVAIGQQ*SVRHRM
Trigger: CATCCTGTGTCTCACTGAGCACTGCTGCCCGATGGC...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGTCTCCCAGGTCACTCTaGTTGCAGCTTGCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMSPRSL*LQLASV
Trigger: CACAGAGGCAAGCTGCAAGCAGAGTGACCTGGGAGA...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGGGAGGAGTCAGGCTCTaGAGCCTGAATTCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQGGVRL*SLNSGP
Trigger: TGGGCCTGAATTCAGGCTGCAGAGCCTGACTCCTCC...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAACCGGAGCCTTGGAACTaGGCCTCACCAGCACAGCCG +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKPEPWN*ASPAQP
Trigger: CGGCTGTGCTGGTGAGGCCCAGTTCCAAGGCTCCGG...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATACAATGTGGTCATGGCTaGATTCTCCGCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIQCGHG*ILRPGR
Trigger: TCTCCCAGGGCGGAGAATCCAGCCATGACCACATTG...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGTACACTCGCGACACTTaGAGGACCTCTTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMYTRDT*RTSSLS
Trigger: ACTCAGGGAAGAGGTCCTCCAAGTGTCGCGAGTGTA...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGGGGGTCTTCCGAGAATaGGTCTTCTGGTGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVGVFRE*VFWCAS
Trigger: CGAGGCACACCAGAAGACCCATTCTCGGAAGACCCC...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCAATAAAGGCAGGAAGTaGTCAGGAAGGAGACCCCGG +
Preference number: 4 (lower is better)
Translates to: QALQPEFRPMPFLFPPACNKGRK*SGRRPR
Trigger: CCGGGGTCTCCTTCCTGACCACTTCCTGCCTTTATT...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACCATGCCAGGCTTATTTaGGTGCTGGCCCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYHARLI*VLAPRK
Trigger: TTTCCTGGGGGCCAGCACCCAAATAAGCCTGGCATG...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATGGGACGCTGAGTTCTaGGAGACATGCGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIWDAEF*ETCAFI
Trigger: AATGAAGGCGCATGTCTCTCAGAACTCAGCGTCCCA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCGGTGGAGCCATGGTATaGGATGAGGCCATTTTCACT +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPGGAMV*DEAIFT
Trigger: AGTGAAAATGGCCTCATCTCATACCATGGCTCCACC...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GGGCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATCTTGTGACAGAGACTaGGCAAGTAGGAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPGFGSGTTQGGSCPWFTSCDRD*ASRRQR
Trigger: TCTTTGCCTCCTACTTGCTCAGTCTCTGTCACAAGA...TGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGAATCCTCAGTTCGGCTaGCTTCTCTCTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQNPQFG*LLSGTA
Trigger: GGCTGTCCCAGAGAGAAGGCAGCCGAACTGAGGATT...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACAGTGGAAATAGTAGGTaGCAAGGCACAGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYSGNSR*QGTEVG
Trigger: GCCCACCTCTGTGCCTTGGCACCTACTATTTCCACT...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCCTGAATTCAGGCCCATaGCTTTTCTGTTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPLNSGP*LFCSLQ
Trigger: CTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAG...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAGGACCCTTCCGGAGGTaGCCGCAGAGACTAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKGPFRR*PQRLAN
Trigger: GTTGGCTAGTCTCTGCGGCCACCTCCGGAAGGGTCC...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCGGCCAGGGCCTCGTGTaGACCAGATGCCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGGQGLV*TRCLLI
Trigger: TATGAGGAGGCATCTGGTCCACACGAGGCCCTGGCC...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CATTTTGACAACTCATCAATCACCCACCCTGTCTGTGGCTCTTCAGGAACTCAGTGCAGCTTGCCTCTGTaGGCTCGGCTCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: HFDNSSITHPVCGSSGTQCSLPL*ARLLDP
Trigger: GGGATCCAGGAGCCGAGCCCACAGAGGCAAGCTGCA...CTGAGTTCCTGAAGAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACAGCGCCGAAGCACTCTaGAACATCTTCCTACACTCG +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYSAEAL*NIFLHS
Trigger: CGAGTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCT...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGCTCGCTGCAGGCATATaGGGTCTTCCGAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQLAAGI*GLPRMG
Trigger: ACCCATTCTCGGAAGACCCCATATGCCTGCAGCGAG...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGAGCGCTGGTGACTGGTaGGATGTGGAAGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMSAGDW*DVEGKG
Trigger: TCCTTTTCCTTCCACATCCCACCAGTCACCAGCGCT...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGACTGAGAGTAAGACATaGCCCCTGCTCTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMTESKT*PLLSGV
Trigger: AACTCCTGAGAGCAGGGGCCATGTCTTACTCTCAGT...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCTACATAAGGACAATGTaGGGCAGAGACAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPYIRTM*GRDSTV
Trigger: CACCGTGCTGTCTCTGCCCCACATTGTCCTTATGTA...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCTTCAGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGCAGGGTTCAAGCTGCTaGGGAGACATCCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSGTTVVPCGWCMEGGAMQGSSC*GDIHVN
Trigger: GTTTACATGGATGTCTCCCCAGCAGCTTGAACCCTG...CATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGAAAAGGCATCGTGGAAGAGGCAGTCTCAAAAGTCAGCCTTGCAGTTAGGCACGGAGGACCTCTTCCCTaGGTAGGTGTATGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RKGIVEEAVSKVSLAVRHGGPLP*VGVWRL
Trigger: GAGCCTCCATACACCTACTCAGGGAAGAGGTCCTCC...GTGCCTAACTGCAAGGCTGACTTTTGAGACTGCCTCTTCCACGATGCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGGTCATTGCAGCACCGTaGTGTGGATCCGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQVIAAP*CGSASE
Trigger: TTCACTTGCGGATCCACATCACGGTGCTGCAATGAC...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCAGCGTCTTGGGACGCTaGGTTCTGAGAGACATGCGC +
Preference number: 4 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGSVLGR*VLRDMR
Trigger: GCGCATGTCTCTCAGAACTCAGCGTCCCAAGACGCT...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCTTGAAACACCTTAGATaGAAAAGGAGGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPLKHLR*KRRARC
Trigger: GCACCTGGCCCTCCTTTTTCATCTAAGGTGTTTCAA...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGACAGTCACATTTTATTaGGGCCACTGCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMTVTFY*GHCMPG
Trigger: GCCTGGCATGCAGTGGCCTCAATAAAATGTGACTGT...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGGCCTCTATTTACTCTTaGCATAGAGGGAATGGGCCC +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMASIYS*HRGNGP
Trigger: GGGCCCATTCCCTCTATGTCAAGAGTAAATAGAGGC...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGGCGACTTCCGGTCATTaGAGCACCGTGATGTGGATC +
Preference number: 4 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLATSGH*STVMWI
Trigger: GATCCACATCACGGTGCTGCAATGACCGGAAGTCGC...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAACTCTTCCCACGGCACTaGGCTCAGGGAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQLFPRH*AQGVLG
Trigger: CCCAAGCACTCCCTGAGCCCAGTGCCGTGGGAAGAG...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ATATCAAGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTCTGGATTCTCCGCCCTaGGAGAGGCTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRVPWRVIQGQRIKAGSLDSPP*ERLASS
Trigger: AGAGGAAGCCAGCCTCTCCCAGGGCGGAGAATCCAG...ACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ATATCAAGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTCGGCTGCCTTCTCTCTaGGACAGCCCTGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ISRVPWRVIQGQRIKAGSRLPSL*DSPEWE
Trigger: TTCCCACTCAGGGCTGTCCCAGAGAGAAGGCAGCCG...ACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCGTCTCAACGACCAAATaGGTGAAGATGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPVSTTK*VKMLRA
Trigger: TGCTCTGAGCATCTTCACCCATTTGGTCGTTGAGAC...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp TGCTGGCCCCCAGGAAAATCAGATTATTCTTGCTCTCCAGGGTTCAAGCTGCTGATGTGGATCCGCAAGTaGACCATCAGGGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: CWPPGKSDYSCSPGFKLLMWIRK*TIRAEL
Trigger: TAGCTCAGCCCTGATGGTTCACTTGCGGATCCACAT...CAGCAGCTTGAACCCTGGAGAGCAAGAATAATCTGATTTTCCTGGGGGCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGGGACCACAGTAGTTCCGTGTGGCTGGTGTATGGAAGGTGGAGCCATGGTATGTCAGTCAGGGCCTACTaGGTCTTGTGTGTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RDHSSSVWLVYGRWSHGMSVRAY*VLCVVD
Trigger: ATCTACAACACACAAGACTCAGTAGGCCCTGACTGA...CATACCATGGCTCCACCTTCCATACACCAGCCACACGGAACTACTGTGGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACCAACGACCAAATGGGTaGAGATGCTCAGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYQRPNG*RCSEHQ
Trigger: TTGATGCTCTGAGCATCTTCACCCATTTGGTCGTTG...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAACCGGAAGCGCAGGCGTaGAGCCTCAGAGTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQPEAQA*SLRVSN
Trigger: ATTGCTCACTCTGAGGCTGCACGCCTGCGCTTCCGG...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAACCAGGTCACTCTGCTTaGAGCTTGCCTCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKPGHSA*SLPLWA
Trigger: AGCCCACAGAGGCAAGCTGCAAGCAGAGTGACCTGG...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAATGGGTCTTCTGGTGTaGCTCGAGCGCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKMGLLV*LERRST
Trigger: AGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCAT...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATACTGTTCAGGAAGCTGTaGTGTAGAAGATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYILFRKL*CRRWVG
Trigger: TCCAACCCATCTTCTACAGCACAGCTTCCTGAACAG...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAAAGGATGCCGGAGCCTTaGAACTGGGCCTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQRMPEP*NWASPA
Trigger: TGCTGGTGAGGCCCAGTTCCAAGGCTCCGGCATCCT...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACAATAGCGCTGGTGACTaGTGGGATGTGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYNSAGD*WDVEGK
Trigger: TTTTCCTTCCACATCCCACCAGTCACCAGCGCTATT...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGATATCAAGAGTCCCCTaGAGAGTGATACAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQISRVP*RVIQGQ
Trigger: CTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCGCATATGAGGATAACTaGAGAGGTTGCTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGAYEDN*RGCSGP
Trigger: GGGCCCCGAGCAACCTCTCCAGTTATCCTCATATGC...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CATTTTGACAACTCATCAATCACCCACCCTGTCTGTGGCTCTTCAGGAACTCAGTGCAGGGCCAGGCTTTaGGTCAGGCACTACACAAGG +
Preference number: 4 (lower is better)
Translates to: HFDNSSITHPVCGSSGTQCRARL*VRHYTR
Trigger: CCTTGTGTAGTGCCTGACCCAAAGCCTGGCCCTGCA...CTGAGTTCCTGAAGAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAAGAGCATCAAGGGGATaGAGATCCAGTTCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIRASRG*RSSSCD
Trigger: GTCACAAGAACTGGATCTCCATCCCCTTGATGCTCT...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CATTTTGACAACTCATCAATCACCCACCCTGTCTGTGGCTCTTCAGGAACTCAGGGAGAGACAGGAACATaGTGGGCAGGTGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HFDNSSITHPVCGSSGTQGETGT*WAGVKQ
Trigger: CTGCTTGACACCTGCCCAGCATGTTCCTGTCTCTCC...CTGAGTTCCTGAAGAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ATATCAAGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGAAGGAGGCTTCTCTTaGGAGGTGAGGTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ISRVPWRVIQGQRIKAGSEGGFS*EVRFGH
Trigger: GTGGCCAAACCTCACCTCCCAAGAGAAGCCTCCTTC...ACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCGGAAGCTTCTCCAGCTaGCCTGAATCACCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSMLEACAISLGMCISPLGSFSS*PESPCA
Trigger: AGCACAAGGTGATTCAGGCCAGCTGGAGAAGCTTCC...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCTGGGACAGCCCTGAGTaGGAAATAGAGGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGWDSPE*EIEGSS
Trigger: ACTGCTACCCTCTATTTCCCACTCAGGGCTGTCCCA...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CATTTTGACAACTCATCAATCACCCACCCTGTCTGTGGCTCTTCAGGAACTCAGTCCTCCACCTTCACTTaGAGGAAGCTGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HFDNSSITHPVCGSSGTQSSTFT*RKLSSS
Trigger: GGAAGAGGACAGCTTCCTTCAAGTGAAGGTGGAGGA...CTGAGTTCCTGAAGAGCCACAGACAGGGTGGGTGATTGATGAGTTGTCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACAGGCACCTATCATTTTaGCAACTCATCAATCACCCA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYRHLSF*QLINHP
Trigger: TGGGTGATTGATGAGTTGTCAAAATGATAGGTGCCT...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATGGGGCCCTAGAAAATaGCTCAATACAGTCACATTT +
Preference number: 4 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIWGPRK*LNTVTF
Trigger: AAATGTGACTGTATTGAGTCATTTTCTAGGGCCCCA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAACTCGTGTGGACCAGATaGCTCCTCATAGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQLVWTR*LLIAEV
Trigger: CACTTCCGCTATGAGGAGGCATCTGGTCCACACGAG...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAGGGCCCAGAGCAGCCTaGATCTCAGCATACTTATAC +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKGPRAA*ISAYLY
Trigger: GTATAAGTATGCTGAGATGCAGGCTGCTCTGGGCCC...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCTCCTCAAATGCAGAGTaGTTCCTAGACAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSMLEACAISLGMCISPLSSNAE*FLDSPS
Trigger: ACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGA...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAAGGCAGGTGTCCGTTCTaGGCTAAGCAGCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQGRCPF*AKQQKS
Trigger: GCTTTTCTGCTGCTTAGCCCAGAACGGACACCTGCC...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAGTAGTTCCGTGTGGCTaGTGTATGGAAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQVVPCG*CMEGGA
Trigger: GGCTCCACCTTCCATACACCAGCCACACGGAACTAC...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GAGCCATGGTATGAGATGAGGCCATTTTCACTGCACGCACAGAAAAATGACAGTCTGGCACACGATATGTaGCCCTCTCTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EPWYEMRPFSLHAQKNDSLAHDM*PSLPVS
Trigger: AGACACAGGCAGAGAGGGCCACATATCGTGTGCCAG...ACTGTCATTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGCATATGAGGAGGTCATaGAGGTTCAGGAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVHMRRS*RFRKVT
Trigger: AGTGACTTTCCTGAACCTCCATGACCTCCTCATATG...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
3UTR CAA 72 bp ATACCCTGTTCAGGAAGCTGTGCTGTAGAAGATGGGTaGGAGAGCTTTCCACCTTGGAGTGACACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: IPCSGSCAVEDG*ESFPPWSDTVR
Trigger: TCTGACTGTGTCACTCCAAGGTGGAAAGCTCTCCAACCCATCTTCTACAGCACAGCTTCCTGAACAGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCGCAAGAAGAACCACATaGGAACAAGCTACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSMLEACAISLGMCISPLARRTT*EQATVG
Trigger: GCCAACTGTAGCTTGTTCTCATGTGGTTCTTCTTGC...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACTCTCATCAGTCTCTGTaGCTCTATTTACTCTTGACA +
Preference number: 4 (lower is better)
Translates to: QELSVSLRPRASEKTLCYSHQSL*LYLLLT
Trigger: TGTCAAGAGTAAATAGAGGCACAGAGACTGATGAGA...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp AGAGGAGGGTTCCAGGCACAGGTACAAAGGCACATAAGTGGGAAAATGTATGGCAGAGGTGCTGATGATTaGTGTGAGTCAGAGACAGTG +
Preference number: 4 (lower is better)
Translates to: RGGFQAQVQRHISGKMYGRGADD*CESETV
Trigger: CACTGTCTCTGACTCACAGCAATCATCAGCACCTCT...GCCATACATTTTCCCACTTATGTGCCTTTGTACCTGTGCCTGGAACCCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp AGAAAAGGCATCGTGGAAGAGGCAGTCTCAAAAGTCAGCCTTGCAGTTAGGCACGAGAGCTTTCCACCTTaGAGTGACACAGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: RKGIVEEAVSKVSLAVRHESFPP*SDTVRS
Trigger: AGATCTGACTGTGTCACTCCAAGGTGGAAAGCTCTC...GTGCCTAACTGCAAGGCTGACTTTTGAGACTGCCTCTTCCACGATGCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGATACGCCAGGTCAAATaGTTCACATATGATGAGACC +
Preference number: 4 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVIRQVK*FTYDET
Trigger: GGTCTCATCATATGTGAACCATTTGACCTGGCGTAT...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAACTCTCTGCCTGTGTCTaGGACTCCCTCAGAGATACT +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQLSACV*DSLRDT
Trigger: AGTATCTCTGAGGGAGTCCCAGACACAGGCAGAGAG...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAAAGGCACTACACAAGGTaGGTCCTGTCCCTGGTTTAC +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQRHYTR*VLSLVY
Trigger: GTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCT...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTGGTCAGGCACGCACAGAAAAATaGCAGTATTCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: RVPWRVIQGQRIKAGSGQARTEK*QYSYMH
Trigger: ATGCATGTATGAATACTGTCATTTTTCTGTGCGTGC...CTGACCACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAATCAGGGTTCCTCAAATaGAGAGTGGTTCCTAGACAG +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKSGFLK*RVVPRQ
Trigger: CTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGA...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAGTAAGACATGGCCCCTaGTCTCAGGAGTTTATGGTA +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKVRHGP*SQEFMV
Trigger: TACCATAAACTCCTGAGAGCAGGGGCCATGTCTTAC...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCCATGCTGGAAGCCTGTaGAATTTCACTAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SSMLEACAISLGMCISPLHAGSL*NFTRNV
Trigger: CACATTCCTAGTGAAATTGCACAGGCTTCCAGCATG...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAACTGTTCCCTCCAGCATaGTGGAAGCCTGTGCAATTT +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQLFPPA*WKPVQF
Trigger: AAATTGCACAGGCTTCCAGCATGCTGGAGGGAACAG...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GAGCCATGGTATGAGATGAGGCCATTTTCACTGCACGCACAGAAAAATGACAGTTTGGGAGGTGAGGTTTaGCCACGCACTAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: EPWYEMRPFSLHAQKNDSLGGEV*PRTRTV
Trigger: AACAGTTCTAGTGCGTGGCCAAACCTCACCTCCCAA...ACTGTCATTTTTCTGTGCGTGCAGTGAAAATGGCCTCATCTCATACCATGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAATTCCCTCCAGCATGCTaGAAGCCTGTGCAATTTCAC +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQFPPAC*KPVQFH
Trigger: GTGAAATTGCACAGGCTTCCAGCATGCTGGAGGGAA...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAAGTGCTTCCAGTTCCTaGCAGTGTGACTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQSASSS*QCDFGQ
Trigger: CTGACCAAAGTCACACTGCCAGGAACTGGAAGCACT...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAAGTGGATCTGTTGGGTaGCAGACTTTGTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQSGSVG*QTLSRS
Trigger: AGATCTGGACAAAGTCTGTCACCCAACAGATCCACT...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp AGAAAAGGCATCGTGGAAGAGGCAGTCTCAAAAGTCAGCCTTGCAGTTAGGCACATCAAATTTGTCTTCTaGAGGAGGCTTCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RKGIVEEAVSKVSLAVRHIKFVF*RRLLLG
Trigger: TCCCAAGAGAAGCCTCCTTCAGAAGACAAATTTGAT...GTGCCTAACTGCAAGGCTGACTTTTGAGACTGCCTCTTCCACGATGCCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp ATATCAAGAGTCCCCTGGAGAGTGATACAGGGGCAGAGAATAAAGGCAGGAAGTAAGTCTCTGTCTCCCTaGGTCTTACCTTCATGTTAT +
Preference number: 4 (lower is better)
Translates to: ISRVPWRVIQGQRIKAGSKSLSP*VLPSCY
Trigger: ATAACATGAAGGTAAGACTCAGGGAGACAGAGACTT...ACTTCCTGCCTTTATTCTCTGCCCCTGTATCACTCTCCAGGGGACTCTTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR GCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAAACACATGGACAGAATaGTGGCAAAGACTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKNTWTE*WQRLSP
Trigger: TGGACTTAGTCTTTGCCAGCATTCTGTCCATGTGTT...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAGCAGGGAGGTTTCTTTaGGCAACATTTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQAGRFL*ATFETP
Trigger: AGGTGTTTCAAATGTTGCCCAAAGAAACCTCCCTGC...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAAAGTTTATGGTATCCTTaGAAAAGGCAGCTCTACAAG +
Preference number: 4 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKSLWYP*KRQLYK
Trigger: CTTGTAGAGCTGCCTTTTCCAAGGATACCATAAACT...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR TCA 90 bp GTCAGCCTTGCAGTTAGGCACAAAATAGTCTGGAGTGGAAATAGTAGGTGCCAACTTACCTTCATGTTATaGACGTTTCTCATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VSLAVRHKIVWSGNSRCQLTFML*TFLISL
Trigger: GAGACTGATGAGAAACGTTCATAACATGAAGGTAAG...TTGGCACCTACTATTTCCACTCCAGACTATTTTGTGCCTAACTGCAAGGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CCA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAACCTTTTAGACAGACATaGACAGATATGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQPFRQT*TDMSQR
Trigger: TCGTTGAGACATATCTGTCCATGTCTGTCTAAAAGG...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS GCA 90 bp GGCACTGGGCTCAGGGAGTGCTTGGGGATGGCCATCGGGCAGCAGTaGTCAGTGAGACACAGGATGCCGGAGCCTTGGAACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GTGLRECLGMAIGQQ*SVRHRMPEPWNWAS
Trigger: TGAGGCCCAGTTCCAAGGCTCCGGCATCCTGTGTCTCACTGAGCACTGCTGCCCGATGGCCATCCCCAAGCACTCCCTGAGCCCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp GCTCATCAGGGTTCCTCAAATGCAGAGTGGTTCCTAGACAGCCCGAGTCTGCCCCAGGATGCCGGAGCCTaGGAACTGGGCCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: AHQGSSNAEWFLDSPSLPQDAGA*ELGLTS
Trigger: GCTGGTGAGGCCCAGTTCCAAGGCTCCGGCATCCTG...GGGCAGACTCGGGCTGTCTAGGAACCACTCTGCATTTGAGGAACCCTGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS GCA 90 bp GAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTaGTACGCCCCCAGGGGCGACTTCCGGTCATTGCAGCACCGTGAT +
Preference number: 5 (lower is better)
Translates to: ELSVSLRPRASEKTL*YAPRGDFRSLQHRD
Trigger: ATCACGGTGCTGCAATGACCGGAAGTCGCCCCTGGGGGCGTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCCCCAGGTCACTCTGCTaGCAGCTTGCCTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QALQPEFRPMPFLFPPACPRSLC*QLASVG
Trigger: GCCCACAGAGGCAAGCTGCAAGCAGAGTGACCTGGG...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS GCA 90 bp CTCGCTGCAGGCATATGGGGTCTTCCGAGAATGGGTCTTCTGGTGTaGCTCGAGCGCCGAAGCACTCTGGAACATCTTCCTACACTCGCG +
Preference number: 5 (lower is better)
Translates to: LAAGIWGLPRMGLLV*LERRSTLEHLPTLA
Trigger: CGCGAGTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAAGACCCCATATGCCTGCAGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 90 bp CCACACTCGCTGCAGGCATATGGGGTCTTCCGAGAATGGGTCTTCTaGTGTGCCTCGAGCGCCGAAGCACTCTGGAACATCTTCCTACAC +
Preference number: 5 (lower is better)
Translates to: PHSLQAYGVFREWVF*CASSAEALWNIFLH
Trigger: GTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAAGACCCCATATGCCTGCAGCGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCCAGAGACTAGCCAACTaGCGCGCCCGCCGACCCGGA +
Preference number: 5 (lower is better)
Translates to: SSMLEACAISLGMCISPLQRLAN*RARRPG
Trigger: TCCGGGTCGGCGGGCGCGCAAGTTGGCTAGTCTCTG...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp CAGGCTCTGCAGCCTGAATTCAGGCCCATGCCTTTTCTGTTCCCTCCAGCATGCGAGAACAAGCTACAGTaGGCCCGCCCAGAGCGTCTT +
Preference number: 5 (lower is better)
Translates to: QALQPEFRPMPFLFPPACENKLQ*ARPERL
Trigger: AAGACGCTCTGGGCGGGCCAACTGTAGCTTGTTCTC...GCATGCTGGAGGGAACAGAAAAGGCATGGGCCTGAATTCAGGCTGCAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 90 bp CGAGCGCCGAAGCACTCTGGAACATCTTCCTACACTCGCGACACTTaGAGGACCTCTTCCCTGAGTAGGTGTATGGAGGCTCTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: RAPKHSGTSSYTRDT*RTSSLSRCMEALSH
Trigger: ATGGGACAGAGCCTCCATACACCTACTCAGGGAAGAGGTCCTCCAAGTGTCGCGAGTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 90 bp TTCCGAGAATGGGTCTTCTGGTGTGCCTCGAGCGCCGAAGCACTCTaGAACATCTTCCTACACTCGCGACACTTGGAGGACCTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: FREWVFWCASSAEAL*NIFLHSRHLEDLFP
Trigger: AGGGAAGAGGTCCTCCAAGTGTCGCGAGTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATAGACATGCGCCTTCATTaGCCCTGGCCCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYIDMRLH*PWPSEP
Trigger: TGGTTCTGAGGGCCAGGGCAAATGAAGGCGCATGTC...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCCACTCTGCTTGCAGCTaGCCTCTGTGGGCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: SSMLEACAISLGMCISPLHSACS*PLWARL
Trigger: GAGCCGAGCCCACAGAGGCAAGCTGCAAGCAGAGTG...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp GCCAGGCTTTGGGTCAGGCACTACACAAGGTGGGTCCTGTCCCTGGTTTACATATCAGGTTCACATGCCTaGACAAAGGCGGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: ARLWVRHYTRWVLSLVYISGSHA*TKAGPR
Trigger: CCTTGGACCCGCCTTTGTCAAGGCATGTGAACCTGA...TATGTAAACCAGGGACAGGACCCACCTTGTGTAGTGCCTGACCCAAAGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp TCCAGCATGCTGGAAGCCTGTGCAATTTCACTAGGAATGTGCATCTCTCCTCTCGGCGACTTCCGGTCATaGCAGCACCGTGATGTGGAT +
Preference number: 5 (lower is better)
Translates to: SSMLEACAISLGMCISPLGDFRS*QHRDVD
Trigger: ATCCACATCACGGTGCTGCAATGACCGGAAGTCGCC...GAGAGGAGAGATGCACATTCCTAGTGAAATTGCACAGGCTTCCAGCATGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 90 bp AGATTCACGGCCACGCTGGTCTGTGGGGACATCCTTGTAAGGCCCTaGAGTTTTCTTGAAGTGGATCTGTTGGGTGACAGACTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RFTATLVCGDILVRP*SFLEVDLLGDRLCP
Trigger: TGGACAAAGTCTGTCACCCAACAGATCCACTTCAAGAAAACTTCAGGGCCTTACAAGGATGTCCCCACAGACCAGCGTGGCCGTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 90 bp TGGAGGCTCTGTCCCATAAGCATCCACCAGATCAAATTTGTCTTCTaGAGGAGGCTTCTCTTGGGAGGTGAGGTTTGGCCACGCACTAGA +
Preference number: 5 (lower is better)
Translates to: WRLCPISIHQIKFVF*RRLLLGGEVWPRTR
Trigger: TCTAGTGCGTGGCCAAACCTCACCTCCCAAGAGAAGCCTCCTTCAGAAGACAAATTTGATCTGGTGGATGCTTATGGGACAGAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp ACCCCGGCTATAATCCAGGCAAGAGGCAATGAGGGCTCACATAAGGTAGCAGTGCTTGAAGTGGATCTGTaGGGTGACAGACTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: TPAIIQARGNEGSHKVAVLEVDL*GDRLCP
Trigger: TGGACAAAGTCTGTCACCCAACAGATCCACTTCAAG...CACTGCTACCTTATGTGAGCCCTCATTGCCTCTTGCCTGGATTATAGCCGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp CAGGAACTCAGCGTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTGCTACTCCACCAGATCAAATTaGTCTTCTGAAGGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: QELSVSLRPRASEKTLCYSTRSN*SSEGGF
Trigger: GAAGCCTCCTTCAGAAGACAAATTTGATCTGGTGGA...GTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAACGCTGAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAACTACACTCGCGACACTaGGAGGACCTCTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQLHSRH*EDLFPE
Trigger: CTCAGGGAAGAGGTCCTCCAAGTGTCGCGAGTGTAG...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp GGATGCAGCATTGTGAGAGAAGACCAGAGAACACATGGACAGAATGCTGGCAAACAGGCACCTATCATTTaGACAACTCATCAATCACCC +
Preference number: 5 (lower is better)
Translates to: GCSIVREDQRTHGQNAGKQAPII*TTHQSP
Trigger: GGGTGATTGATGAGTTGTCAAAATGATAGGTGCCTG...TTTGCCAGCATTCTGTCCATGTGTTCTCTGGTCTTCTCTCACAATGCTGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS-3UTR CAA 90 bp CCCGAAATACAGGGAGATACATATGGAGAGATGGTGACGGTGACTAGTACACAAGAGTTTATGGTATCCTaGGAAAAGGCAGCTCTACAA +
Preference number: 5 (lower is better)
Translates to: PEIQGDTYGEMVTVTSTQEFMVS*EKAALQ
Trigger: TTGTAGAGCTGCCTTTTCCAAGGATACCATAAACTC...TTGTGTACTAGTCACCGTCACCATCTCTCCATATGTATCTCCCTGTATTTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CAA 72 bp GGACCCTTCCGGAGGTGGCCGCAGAGACTAGCCAACTaGCGCGCCCGCCGACCCGGACCACAGCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: GPFRRWPQRLAN*RARRPGPQLPA
Trigger: TGCTGGGAGCTGTGGTCCGGGTCGGCGGGCGCGCAAGTTGGCTAGTCTCTGCGGCCACCTCCGGAAGGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CAA 90 bp ACAGCCGGCGGACCCTTCCGGAGGTGGCCGCAGAGACTAGCCAACTaGCGCGCCCGCCGACCCGGACCACAGCTCCCAGCACACCTCAAG +
Preference number: 6 (lower is better)
Translates to: TAGGPFRRWPQRLAN*RARRPGPQLPAHLK
Trigger: CTTGAGGTGTGCTGGGAGCTGTGGTCCGGGTCGGCGGGCGCGCAAGTTGGCTAGTCTCTGCGGCCACCTCCGGAAGGGTCCGCCGGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 72 bp CGCCCCCAGGGGCGACTTCCGGTCATTGCAGCACCGTaGTGTGGATCCGCAAGTGAACCATCAGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RPQGRLPVIAAP*CGSASEPSGLS
Trigger: GCTCAGCCCTGATGGTTCACTTGCGGATCCACATCACGGTGCTGCAATGACCGGAAGTCGCCCCTGGGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 72 bp AGTGCTTGGGGATGGCCATCGGGCAGCAGTGCTCAGTaGGACACAGGATGCCGGAGCCTTGGAACTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SAWGWPSGSSAQ*DTGCRSLGTGP
Trigger: AGGCCCAGTTCCAAGGCTCCGGCATCCTGTGTCTCACTGAGCACTGCTGCCCGATGGCCATCCCCAAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS GCA 72 bp GTTTCTCTTAGACCTCGAGCCTCCGAGAAGACGCTGTaGTACGCCCCCAGGGGCGACTTCCGGTCATTGCAG +
Preference number: 6 (lower is better)
Translates to: VSLRPRASEKTL*YAPRGDFRSLQ
Trigger: CTGCAATGACCGGAAGTCGCCCCTGGGGGCGTAGCACAGCGTCTTCTCGGAGGCTCGAGGTCTAAGAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp CTTCACTTGAAGGAAGCTGTCCTCTTCCCACGGCACTaGGCTCAGGGAGTGCTTGGGGATGGCCATCGGGCA +
Preference number: 6 (lower is better)
Translates to: LHLKEAVLFPRH*AQGVLGDGHRA
Trigger: TGCCCGATGGCCATCCCCAAGCACTCCCTGAGCCCAGTGCCGTGGGAAGAGGACAGCTTCCTTCAAGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp CCACACTCGCTGCAGGCATATGGGGTCTTCCGAGAATaGGTCTTCTGGTGTGCCTCGAGCGCCGAAGCACTC +
Preference number: 6 (lower is better)
Translates to: PHSLQAYGVFRE*VFWCASSAEAL
Trigger: GAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAAGACCCCATATGCCTGCAGCGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CAA 72 bp ACGCTGTGCTACGCCCCCAGGGGCGACTTCCGGTCATaGCAGCACCGTGATGTGGATCCGCAAGTGAACCAT +
Preference number: 6 (lower is better)
Translates to: TLCYAPRGDFRS*QHRDVDPQVNH
Trigger: ATGGTTCACTTGCGGATCCACATCACGGTGCTGCAATGACCGGAAGTCGCCCCTGGGGGCGTAGCACAGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp ACTCTCCCAGGTCACTCTGCTTGCAGCTTGCCTCTGTaGGCTCGGCTCCTGGATCCCATCCTCTCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: TLPGHSACSLPL*ARLLDPILSCP
Trigger: TGGACAAGAGAGGATGGGATCCAGGAGCCGAGCCCACAGAGGCAAGCTGCAAGCAGAGTGACCTGGGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp TGGGTCTTCTGGTGTGCCTCGAGCGCCGAAGCACTCTaGAACATCTTCCTACACTCGCGACACTTGGAGGAC +
Preference number: 6 (lower is better)
Translates to: WVFWCASSAEAL*NIFLHSRHLED
Trigger: GTCCTCCAAGTGTCGCGAGTGTAGGAAGATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp CTGCAGGCATATGGGGTCTTCCGAGAATGGGTCTTCTaGTGTGCCTCGAGCGCCGAAGCACTCTGGAACATC +
Preference number: 6 (lower is better)
Translates to: LQAYGVFREWVF*CASSAEALWNI
Trigger: GATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAAGACCCCATATGCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CAA 72 bp CCAGACCTCTCTGAGCTGCCCTCAGGTTCACATGCCTaGACAAAGGCGGGTCCAAGGGAAACACCTCCCATG +
Preference number: 6 (lower is better)
Translates to: PDLSELPSGSHA*TKAGPRETPPM
Trigger: CATGGGAGGTGTTTCCCTTGGACCCGCCTTTGTCAAGGCATGTGAACCTGAGGGCAGCTCAGAGAGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CAA 90 bp CCTGATAGTCCAGACCTCTCTGAGCTGCCCTCAGGTTCACATGCCTaGACAAAGGCGGGTCCAAGGGAAACACCTCCCATGAGGGTCTCA +
Preference number: 6 (lower is better)
Translates to: PDSPDLSELPSGSHA*TKAGPRETPPMRVS
Trigger: TGAGACCCTCATGGGAGGTGTTTCCCTTGGACCCGCCTTTGTCAAGGCATGTGAACCTGAGGGCAGCTCAGAGAGGTCTGGACTATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS GCA 72 bp GGCATATGGGGTCTTCCGAGAATGGGTCTTCTGGTGTaGCTCGAGCGCCGAAGCACTCTGGAACATCTTCCT +
Preference number: 6 (lower is better)
Translates to: GIWGLPRMGLLV*LERRSTLEHLP
Trigger: AGGAAGATGTTCCAGAGTGCTTCGGCGCTCGAGGCACACCAGAAGACCCATTCTCGGAAGACCCCATATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 72 bp GCCACGCTGGTCTGTGGGGACATCCTTGTAAGGCCCTaGAGTTTTCTTGAAGTGGATCTGTTGGGTGACAGA +
Preference number: 6 (lower is better)
Translates to: ATLVCGDILVRP*SFLEVDLLGDR
Trigger: TCTGTCACCCAACAGATCCACTTCAAGAAAACTTCAGGGCCTTACAAGGATGTCCCCACAGACCAGCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS CCA 72 bp AAGCACTCTGGAACATCTTCCTACACTCGCGACACTTaGAGGACCTCTTCCCTGAGTAGGTGTATGGAGGCT +
Preference number: 6 (lower is better)
Translates to: KHSGTSSYTRDT*RTSSLSRCMEA
Trigger: AGCCTCCATACACCTACTCAGGGAAGAGGTCCTCCAAGTGTCGCGAGTGTAGGAAGATGTTCCAGAGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5
CDS TCA 72 bp TGTCCCATAAGCATCCACCAGATCAAATTTGTCTTCTaGAGGAGGCTTCTCTTGGGAGGTGAGGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: CPISIHQIKFVF*RRLLLGGEVWP
Trigger: TGGCCAAACCTCACCTCCCAAGAGAAGCCTCCTTCAGAAGACAAATTTGATCTGGTGGATGCTTATGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329665.5