RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN18 (Homo sapiens)

Ensembl gene IDs: ENSG00000121413

Ensembl transcript IDs: ENST00000240727.10, ENST00000421612.6, ENST00000433686.6, ENST00000594191.5, ENST00000594567.1, ENST00000595721.1, ENST00000595784.1, ENST00000595944.1, ENST00000596372.1, ENST00000598497.1, ENST00000600318.1, ENST00000600404.1, ENST00000600845.1, ENST00000600897.5, ENST00000601063.1, ENST00000601144.6

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCA +
Preference number: 1 (lower is better)
Translates to: QEAATQGRGKAQCLV*DSRPAKRPLRNGTA
Trigger: TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR GCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAC +
Preference number: 1 (lower is better)
Translates to: QTPQEAATQGRGKAQ*LVWDSRPAKRPLRN
Trigger: GTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR TCA 90 bp GCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCA +
Preference number: 1 (lower is better)
Translates to: APLGCERWPRVCLQR*GLPVDPSRWERLAS
Trigger: TGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
3UTR CCA 90 bp CAGAGGACGTCCACAAACACCACAGGAAGCCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCG +
Preference number: 1 (lower is better)
Translates to: QRTSTNTTGSRHPGA*KGPMPRLGFTAGKA
Trigger: CGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTGGACGTCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR CCA 90 bp CTACACTGCACAATGTCAAATAACCTAGCATGGGGCGGCACTAAATaGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCC +
Preference number: 1 (lower is better)
Translates to: LHCTMSNNLAWGGTK*LQESRVFFHIRRLP
Trigger: GGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGACATTGTGCAGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR TCA 90 bp CAACCCTGGGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTaGAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACAC +
Preference number: 1 (lower is better)
Translates to: QPWGAQTGGIGARVT*RKHWQITHFKATLH
Trigger: GTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCCCCAGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR TCA 90 bp TTGAGCAACCCTGGGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTC +
Preference number: 1 (lower is better)
Translates to: LSNPGERKQEESGQG*LEESTGRSRTLRQL
Trigger: GAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR GCA 90 bp ACAGCCCCTCATAGATGCTCTGGGTCCTTGTGTGTGGATGCTGTTTaGCTCAAATGCACCTCTGGATTTCTATGGAGCATTTCTACCTGG +
Preference number: 1 (lower is better)
Translates to: TAPHRCSGSLCVDAV*LKCTSGFLWSISTW
Trigger: CCAGGTAGAAATGCTCCATAGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATCTATGAGGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CCA 90 bp CAGTCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTaGGAAAACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTG +
Preference number: 1 (lower is better)
Translates to: QSNVSTLVSSESTDT*ENFPTLDTLAQGRL
Trigger: CAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 90 bp CGGTCTGAAAACCCTGCCTTAGGCTGCAAGCATTTCTGTGATCTCTaGGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACTAGGA +
Preference number: 1 (lower is better)
Translates to: RSENPALGCKHFCDL*ELLHIGKHTRGKLG
Trigger: TCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAGCCTAAGGCAGGGTTTTCAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CCA 90 bp CACTTTAAGGCAACTCTACACTGCACAATGTCAAATAACCTAGCATaGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCAC +
Preference number: 1 (lower is better)
Translates to: HFKATLHCTMSNNLA*GGTKWLQESRVFFH
Trigger: GTGGAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTTAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CCA 90 bp CGTTACATTTTGAAGGCTCATCTCCTTGTTAGATCTTCATCAAGGTaGCTAGGTTGTCCACCCTGGCTGATGGCTGCTCTACAGTCATCA +
Preference number: 1 (lower is better)
Translates to: RYILKAHLLVRSSSR*LGCPPWLMAALQSS
Trigger: TGATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAAGATCTAACAAGGAGATGAGCCTTCAAAATGTAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR TCA 90 bp GAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTaGATCCCCATAGGTCTCAGTCCAATGTGTCAACTCTGGTTTCTA +
Preference number: 1 (lower is better)
Translates to: EEAKKIRSVTATDAH*IPIGLSPMCQLWFL
Trigger: TAGAAACCAGAGTTGACACATTGGACTGAGACCTATGGGGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 90 bp CTCCATATAGGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCTaGTTTTGCAGATTAGAAGTGAAGTTGACATCACGCCAAGTACGA +
Preference number: 1 (lower is better)
Translates to: LHIGKHTRGKLGNSF*FCRLEVKLTSRQVR
Trigger: TCGTACTTGGCGTGATGTCAACTTCACTTCTAATCTGCAAAAGCAGAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR GCA 90 bp TCAACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTaGAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACA +
Preference number: 1 (lower is better)
Translates to: STYFAHNFPARNVLH*NQFSHLDVWVKSFT
Trigger: TGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 2 (lower is better)
Translates to: DPSRWERLASGADSGHRQRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR-3UTR CCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: SPRMRALAQGVFTEVRASAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR GCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 2 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR GCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 2 (lower is better)
Translates to: WLQESRVFFHIRRLPSDARGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR CAA 90 bp CAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QGVFTEVRASRGPFS*GALSLRSGFRAQAE
Trigger: CTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp GGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAAGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: GALSLRSGFRAQAEDVHKAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...TTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR-3UTR GCA 90 bp TTCATCAAGGTGGCTAGGTTGTCCACCCTGGCTGATGGCTGCTCTACAGTCATCACAGCCCCTCATAGATaGTCTGGGTCCTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: FIKVARLSTLADGCSTVITAPHR*SGSLCV
Trigger: CACACACAAGGACCCAGAGCATCTATGAGGGGCTGT...GATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CCA 90 bp GATGCTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATTGGAGCATTTCTACCTaGTCCTCACATTCCCAGACC +
Preference number: 2 (lower is better)
Translates to: DALGPCVWMLFASNAPLDWSIST*SSHSQT
Trigger: GGTCTGGGAATGTGAGGACCAGGTAGAAATGCTCCA...ATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CAA 90 bp ACAATGGTCATGGTGACCACAGCCCCTCATAGATGCTCTGGGTCCTaGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATTTCTA +
Preference number: 2 (lower is better)
Translates to: TMVMVTTAPHRCSGS*CVDAVCLKCTSGFL
Trigger: TAGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATCTATGAGGGGCTGTGGTCACCATGACCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CCA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACCACTTGAGCAACCCTaGGGAGCGCAAACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKPLEQP*GAQTGG
Trigger: TCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAAGTGG...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp TATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCACTCGGATGCGAGCGCTaGCCCAGGGTGTGTTTACAG +
Preference number: 2 (lower is better)
Translates to: YFAHNFPARNVLHCNQFSLGCER*PRVCLQ
Trigger: CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAG...TGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp TCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTCTAGGTTGTCCACCCTaGCTGATGGCTGCTCTACAG +
Preference number: 2 (lower is better)
Translates to: SNVSTLVSSESTDTWENFLGCPP*LMAALQ
Trigger: CTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAG...AAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR GCA 90 bp TTCATAAGGACATGTGTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTGTGTGGATGCTGTTTaGCTCAAATGCACCTCTGGA +
Preference number: 2 (lower is better)
Translates to: FIRTCVPIKHLLVSFSFVCVDAV*LKCTSG
Trigger: TCCAGAGGTGCATTTGAGGCAAACAGCATCCACACA...CACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGACACATGTCCTTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR TCA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFESGQG*LEESTG
Trigger: GCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTC...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 2 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CAA 90 bp CGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGCAATTACATGTaGTTCACTAAGGTGTGTAGAAAGGCTGAAGGAGTTACCACCTTC +
Preference number: 2 (lower is better)
Translates to: RVLLLCVVPFSGNYM*FTKVCRKAEGVTTF
Trigger: GAAGGTGGTAACTCCTTCAGCCTTTCTACACACCTTAGTGAACAACATGTAATTGCCAGAGAAAGGAACAACACAAAGGAGAAGGACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR GCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 2 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR GCA 90 bp TATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCAGCGGCACTAAATGGCTaGAGGAAAGCCGAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: YFAHNFPARNVLHCNQFSAALNG*RKAESS
Trigger: AGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGC...TGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTTGGGGCGGCACTAAATaGCTGCAGGAAAGCCGAGTC +
Preference number: 2 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPWGGTK*LQESRV
Trigger: GACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCA...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CCA 90 bp CTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTCCCACACTAGACACAGCTGACTGTTGTGGTTaGAGAATTTTTCACACTCCA +
Preference number: 2 (lower is better)
Translates to: LVSSESTDTWENFPTLDTADCCG*RIFHTP
Trigger: TGGAGTGTGAAAAATTCTCCAACCACAACAGTCAGC...TGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR TCA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCCTGCAAGCATTTCTGTaGTCTCTGCGAGCTACTCCA +
Preference number: 2 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFLQAFL*SLRATP
Trigger: TGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAG...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR TCA 90 bp CTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGCAAACCTTCGTTACATTTTaGAGGCTCATCTCCTTGTTA +
Preference number: 2 (lower is better)
Translates to: LSNTSSCPSPLCCSFLWQTFVTF*RLISLL
Trigger: TAACAAGGAGATGAGCCTTCAAAATGTAACGAAGGT...TTGCCAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGAGGTGTTTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR TCA 90 bp TCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTGTTATGTGTGATCAATaGAGGCCTTTCTACACCCAG +
Preference number: 2 (lower is better)
Translates to: SNVSTLVSSESTDTWENFVMCDQ*RPFYTQ
Trigger: CTGGGTGTAGAAAGGCCTTCATTGATCACACATAAC...AAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CCA 90 bp TCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTACCTCTGGATTTCTATaGAGCATTTCTACCTGGTCC +
Preference number: 2 (lower is better)
Translates to: SNVSTLVSSESTDTWENFTSGFL*SISTWS
Trigger: GGACCAGGTAGAAATGCTCCATAGAAATCCAGAGGT...AAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCTCCCATTTTACTAAATaGGCTGGGACCCACGGTCTG +
Preference number: 2 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFSHFTK*AGTHGL
Trigger: CAGACCGTGGGTCCCAGCCCATTTAGTAAAATGGGA...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CAA 90 bp ACCCTGGCTGATGGCTGCTCTACAGTCATCATTTTCCTCAAGAATTaGACCGTTAGAGCCTTTCTGACAATTATGTATGTAACTAAAATG +
Preference number: 2 (lower is better)
Translates to: TLADGCSTVIIFLKN*TVRAFLTIMYVTKM
Trigger: CATTTTAGTTACATACATAATTGTCAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAATGATGACTGTAGAGCAGCCATCAGCCAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR GCA 90 bp TATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCAAAGGCAACTCTACACTaGACAATGTCAAATAACCTA +
Preference number: 2 (lower is better)
Translates to: YFAHNFPARNVLHCNQFSKATLH*TMSNNL
Trigger: TAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTT...TGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR GCA 72 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: QEAATQGRGKAQ*LVWDSRPAKRP
Trigger: GGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR CCA 72 bp GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAC +
Preference number: 3 (lower is better)
Translates to: ATQGRGKAQCLV*DSRPAKRPLRN
Trigger: GTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR TCA 72 bp CCTGGGGAGCGCAAACAGGAGGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGCAGATCACGCACTTTA +
Preference number: 3 (lower is better)
Translates to: PGERKQEESGQG*LEESTGRSRTL
Trigger: TAAAGTGCGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR TCA 72 bp GGAGCGCAAACAGGAGGAATCGGGGCAAGGGTGACTTaGAGAAAGCACTGGCAGATCACGCACTTTAAGGCA +
Preference number: 3 (lower is better)
Translates to: GAQTGGIGARVT*RKHWQITHFKA
Trigger: TGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTCCTCCTGTTTGCGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CAA 90 bp AGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCACGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: RKHWQITHFKATLHCTMSRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...TGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CCA 72 bp CCACAGCCCCTCATAGATGCTCTGGGTCCTTGTGTGTaGATGCTGTTTGCCTCAAATGCACCTCTGGATTTC +
Preference number: 3 (lower is better)
Translates to: PQPLIDALGPCV*MLFASNAPLDF
Trigger: GAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATCTATGAGGGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp CTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTCCCACACTAGACACAATCAAGGTGGCTAGGTaGTCCACCCTGGCTGATGGC +
Preference number: 3 (lower is better)
Translates to: LVSSESTDTWENFPTLDTIKVAR*STLADG
Trigger: GCCATCAGCCAGGGTGGACAACCTAGCCACCTTGAT...TGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CCA 72 bp GCAACTCTACACTGCACAATGTCAAATAACCTAGCATaGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTC +
Preference number: 3 (lower is better)
Translates to: ATLHCTMSNNLA*GGTKWLQESRV
Trigger: GACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGACATTGTGCAGTGTAGAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR GCA 72 bp AACCCTGCCTTAGGCTGCAAGCATTTCTGTGATCTCTaGGAGCTACTCCATATAGGTAAACACACGCGAGGT +
Preference number: 3 (lower is better)
Translates to: NPALGCKHFCDL*ELLHIGKHTRG
Trigger: ACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAGCCTAAGGCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CCA 72 bp TTGAAGGCTCATCTCCTTGTTAGATCTTCATCAAGGTaGCTAGGTTGTCCACCCTGGCTGATGGCTGCTCTA +
Preference number: 3 (lower is better)
Translates to: LKAHLLVRSSSR*LGCPPWLMAAL
Trigger: TAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAAGATCTAACAAGGAGATGAGCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp TTCATAAGGACATGTGTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGGTGTGTGGATGCTGTTaGCCTCAAATGCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: FIRTCVPIKHLLVSFSFVVCGCC*PQMHLW
Trigger: CCAGAGGTGCATTTGAGGCAAACAGCATCCACACAC...CACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGACACATGTCCTTATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp AACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACCTTCTTTCGTGTCCTTCTCCTTaGTGTTGTTCCTTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: NFPTLDTLAQGRLSMYLLSCPSP*CCSFLW
Trigger: CCAGAGAAAGGAACAACACAAAGGAGAAGGACACGA...AAGAAGGTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 72 bp ATCAAGGTGGCTAGGTTGTCCACCCTGGCTGATGGCTaGTCTACAGTCATCATTTTCCTCAAGAATTTGACC +
Preference number: 3 (lower is better)
Translates to: IKVARLSTLADG*STVIIFLKNLT
Trigger: GGTCAAATTCTTGAGGAAAATGATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 72 bp GGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATaGTCACTGAATCCCCATAGGTCTCAGTCCAATGTG +
Preference number: 3 (lower is better)
Translates to: GGKENQISHCHR*SLNPHRSQSNV
Trigger: CACATTGGACTGAGACCTATGGGGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CCA 72 bp GTTAGATCTTCATCAAGGTGGCTAGGTTGTCCACCCTaGCTGATGGCTGCTCTACAGTCATCATTTTCCTCA +
Preference number: 3 (lower is better)
Translates to: VRSSSRWLGCPP*LMAALQSSFSS
Trigger: TGAGGAAAATGATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAAGATCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 72 bp CATAGATGCTCTGGGTCCTTGTGTGTGGATGCTGTTTaGCTCAAATGCACCTCTGGATTTCTATGGAGCATT +
Preference number: 3 (lower is better)
Translates to: HRCSGSLCVDAV*LKCTSGFLWSI
Trigger: AATGCTCCATAGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CCA 72 bp GTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTaGGAAAACTTTCCCACACTAGACACACTGGCACAA +
Preference number: 3 (lower is better)
Translates to: VSTLVSSESTDT*ENFPTLDTLAQ
Trigger: TTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp TCTAGCGAGAGCACAGATACTTGGGAAAACTTTCCCACACTAGACACACTGGCATCTGGCAATTACATGTaGTTCACTAAGGTGTGTAGA +
Preference number: 3 (lower is better)
Translates to: SSESTDTWENFPTLDTLASGNYM*FTKVCR
Trigger: TCTACACACCTTAGTGAACAACATGTAATTGCCAGA...TGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 72 bp GGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCTaGTTTTGCAGATTAGAAGTGAAGTTGACATCACGC +
Preference number: 3 (lower is better)
Translates to: GKHTRGKLGNSF*FCRLEVKLTSR
Trigger: GCGTGATGTCAACTTCACTTCTAATCTGCAAAAGCAGAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CAA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCATTTTCCTCAAGAATTaGACCGTTAGAGCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESIFLKN*TVRAFL
Trigger: CAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAAT...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp AGTCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTCCACATTCACTGTCATaGTATTCATTTCCAGAGATA +
Preference number: 3 (lower is better)
Translates to: SPMCQLWFLARAQILGKTPHSLS*YSFPEI
Trigger: TATCTCTGGAAATGAATACAATGACAGTGAATGTGG...AGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR-3UTR CAA 90 bp CATAAACTCTTCAACATGAAGTCTCTGACAAAGAGGAGGCAAAGAAAATCAGATGTTCACAGAAACCTGTaGTTTGAGGACCTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: HKLFNMKSLTKRRQRKSDVHRNL*FEDLFD
Trigger: GTCAAAGAGGTCCTCAAACAACAGGTTTCTGTGAAC...ATCTGATTTTCTTTGCCTCCTCTTTGTCAGAGACTTCATGTTGAAGAGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR GCA 72 bp TTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTaGAACCAGTTCTCACATTTAGATGTATGGGTGAAA +
Preference number: 3 (lower is better)
Translates to: FAHNFPARNVLH*NQFSHLDVWVK
Trigger: TTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR-3UTR CAA 90 bp AGAAATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTAGATTAGAAGTGAAGTaGACATCACGCCAAGTACGA +
Preference number: 3 (lower is better)
Translates to: RNVLHCNQFSHLDVWVKSRLEVK*TSRQVR
Trigger: TCGTACTTGGCGTGATGTCAACTTCACTTCTAATCT...ACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGGCGGCTCCCCTCGGATaGGAGCGCTGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGAAPLG*ERWPRV
Trigger: CACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGC...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGCAGATCCGGCGGGGCTaGGGAGCTCCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRQIRRG*GAPGGG
Trigger: GCCTCCCCCAGGAGCTCCCCAGCCCCGCCGGATCTG...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGCAGATCCGGCGGGGCTaGGGAGCTCCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERQIRRG*GAPGGG
Trigger: GCCTCCCCCAGGAGCTCCCCAGCCCCGCCGGATCTG...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCCCTCCACGCTCTCTaGGGGACCGCCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPALHAL*GTARPS
Trigger: GCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGC...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGCCCGGCCTCCAGCCCTaGGCTGTCGCCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRPGLQP*AVAGAR
Trigger: TCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGG...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGPAPRA*LGLASS
Trigger: CGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGG...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGTCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HHRKPPPRGVERPNASSGSDSAS*GSCGSG
Trigger: CCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGA...CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCATCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTASDSAS*GSCGSG
Trigger: CCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGA...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCGCCCTCCACGCTCTCTaGGGGACCGCCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSALHAL*GTARPS
Trigger: GCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGC...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGCGGCTCCCCTCGGATaGGAGCGCTGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRAAPLG*ERWPRV
Trigger: CACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGC...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACACTGCTGACCCCGGCGTaGGCAGATCCGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STSGGSPRMRALAQGVFTLLTPA*ADPAGL
Trigger: CAGCCCCGCCGGATCTGCCCACGCCGGGGTCAGCAG...TGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCCTGCTGACCCCGGCGTaGGCAGATCCGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSLLTPA*ADPAGL
Trigger: CAGCCCCGCCGGATCTGCCCACGCCGGGGTCAGCAG...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSPAPRA*LGLASS
Trigger: CGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGTCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPSDSAS*GSCGSG
Trigger: CCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGA...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTTCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPSDSAS*GSCGSG
Trigger: CCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGA...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTGCCCTAGCCCCCGCCTaGGCTTCGCGGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPALAPA*ASRVDG
Trigger: ACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGC...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGCCCTAGCCCCCGCCTaGGCTTCGCGGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSALAPA*ASRVDG
Trigger: ACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGC...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGCCCTAGCCCCCGCCTaGGCTTCGCGGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRALAPA*ASRVDG
Trigger: ACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGC...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAGCCCTCCACGCTCTCTaGGGGACCGCCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGALHAL*GTARPS
Trigger: GCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGC...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACGCCCTCCACGCTCTCTaGGGGACCGCCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: FHIRRLPSDASAGPGCVYALHAL*GTARPS
Trigger: GCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGC...GTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGCTGCCGCCTCCCGCCTaGGAGGCTGCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGLPPPA*EAASLW
Trigger: CCACAAGGAAGCAGCCTCCCAGGCGGGAGGCGGCAG...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR GCA 90 bp CTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACCCGGCCTCCAGCCCTaGGCTGTCGCCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LPHPAAPLGCERWPRVCLPGLQP*AVAGAR
Trigger: TCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGG...TAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAACAGCGGCTCACCTCTaGGCCTCTGGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGTAAHL*ASGGAG
Trigger: CCCCGCACCCCCAGAGGCGCAGAGGTGAGCCGCTGT...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCACAGCGGCTCACCTCTaGGCCTCTGGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGTAAHL*ASGGAG
Trigger: CCCCGCACCCCCAGAGGCGCAGAGGTGAGCCGCTGT...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCACCCAGCGCTCTCCTaGCGCCTCCCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASHPALS*RLPPGR
Trigger: CCTCCCAGGCGGGAGGCGGCAGGAGAGCGCTGGGTG...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR CCA 90 bp TTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: FHIRRLPSDASAGPGCVYLQGPG*GSRARL
Trigger: CAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAG...GTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGLQGPG*GSRARL
Trigger: CAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAG...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPPAPRA*LGLASS
Trigger: CGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGG...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGACCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGPAPRA*LGLASS
Trigger: CGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGG...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPSGAGC*MTDCLC
Trigger: GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGA...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCCCTAGCCCCCGCCTaGGCTTCGCGGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLALAPA*ASRVDG
Trigger: ACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGC...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTGCCCTAGCCCCCGCCTaGGCTTCGCGGGTGGACGGT +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLALAPA*ASRVDG
Trigger: ACCGTCCACCCGCGAAGCCCAGGCGGGGGCTAGGGC...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCGCCCTCCACGCTCTCTaGGGGACCGCCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: DASAGPGCVYRGEGFPWTALHAL*GTARPS
Trigger: GCTAGGGCGGGCGGTCCCCCAGAGAGCGTGGAGGGC...GGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGCTCCGACTCTCCGCATaGGCGCGCAGAGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPLRLSA*ARRVPG
Trigger: TCCGGGAACTCTGCGCGCCCATGCGGAGAGTCGGAG...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600404.1
CDS-3UTR TCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGGTTGGGGTCGCTCTCTaGCCCCCGCGCTGCATCCCC +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDAVGVAL*PPRCIP
Trigger: GGGGATGCAGCGCGGGGGTCAGAGAGCGACCCCAAC...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR TCA 90 bp GCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGCCTAACGCTGCCCACTaGGGCGTCCTCACCGTCTAC +
Preference number: 4 (lower is better)
Translates to: AESSSTSGGSPRMRALAQPNAAH*GVLTVY
Trigger: GTAGACGGTGAGGACGCCTCAGTGGGCAGCGTTAGG...CTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR TCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGAGAGGTGCCAGGGATaGCCAGATGCCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERERCQG*PDAQWA
Trigger: AGCCCACTGGGCATCTGGTCATCCCTGGCACCTCTC...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp CCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: PHPAAPLGCERWPRVCLQGQAAG*RTASAI
Trigger: GATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCC...CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: ATQGRGKAQCLVWDSRPAGQAAG*RTASAI
Trigger: GATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCC...TGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCCGGGACCGACCCACCTaGTGCGCAGCTACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QTPQEAATQGRGKAQCLVRDRPT*CAATPG
Trigger: GCCTGGGGTAGCTGCGCAGCAGGTGGGTCGGTCCCG...GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000421612.6
CDS-3UTR GCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCAGAACCCACAGACCTaGCTGCAGGGCCCCTCACCG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSQNPQT*LQGPSP
Trigger: CGGTGAGGGGCCCTGCAGGCAGGTCTGTGGGTTCTG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR GCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCACCCAGCGCTCTCCTaGCGCCTCCCGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWHPALS*RLPPSG
Trigger: CCCAGAAGGCGGGAGGCGGCAGGAGAGCGCTGGGTG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCCACCCAGCGCTCTCCTaGCGCCTCCCGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QTPQEAATQGRGKAQCLVHPALS*RLPPSG
Trigger: CCCAGAAGGCGGGAGGCGGCAGGAGAGCGCTGGGTG...GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGCACCCAGCGCTCTCCTaGCGCCTCCCGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDAHPALS*RLPPSG
Trigger: CCCAGAAGGCGGGAGGCGGCAGGAGAGCGCTGGGTG...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp CACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGCCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAA +
Preference number: 4 (lower is better)
Translates to: HHRKPPPRGVERPNASSGPPPQW*PTGDRQ
Trigger: TTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGG...CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAA +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSPPPQW*PTGDRQ
Trigger: TTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCACCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAA +
Preference number: 4 (lower is better)
Translates to: ATQGRGKAQCLVWDSRPAPPPQW*PTGDRQ
Trigger: TTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGG...TGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSLSGAG*WMTDCL
Trigger: GAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCTTCCCAGTTTCGCCGTaGCCCTGTCCGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSFPVSP*PCPGQA
Trigger: AGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAA...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGCCCGGCCTCCAGCCCTaGGCTGTCGCCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLPGLQP*AVAGAR
Trigger: TCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGG...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACCCGGCCTCCAGCCCTaGGCTGTCGCCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEPGLQP*AVAGAR
Trigger: TCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGG...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCCCGGCCTCCAGCCCTaGGCTGTCGCCGGAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASPGLQP*AVAGAR
Trigger: TCTAGCTCCGGCGACAGCGCAGGGCTGGAGGCCGGG...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGTCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRSGRHG*CGAPSG
Trigger: ACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGA...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCAACAGCGGCTCACCTCTaGGCCTCTGGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSTAAHL*ASGGAG
Trigger: CCCCGCACCCCCAGAGGCGCAGAGGTGAGCCGCTGT...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCAGCGGCTCCCCTCGGATaGGAGCGCTGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAAAPLG*ERWPRV
Trigger: CACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGC...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCACCCAGCGCTCTCCTaGCGCCTCCCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQHPALS*RLPPGR
Trigger: CCTCCCAGGCGGGAGGCGGCAGGAGAGCGCTGGGTG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAAGACCCTCGGCCTCCTaGACGCACAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPERPSAS*THSGGS
Trigger: CGAGCCCCCGCTGTGCGTCCAGGAGGCCGAGGGTCT...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR CCA 90 bp GCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGCCCAGTGGGCTCAGGTaGTGCCAGAACCCACAGACC +
Preference number: 4 (lower is better)
Translates to: AESSSTSGGSPRMRALAQPSGLR*CQNPQT
Trigger: GGTCTGTGGGTTCTGGCACCACCTGAGCCCACTGGG...CTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGATCCGGCGGGGCTaGGGAGCTCCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAQIRRG*GAPGGG
Trigger: GCCTCCCCCAGGAGCTCCCCAGCCCCGCCGGATCTG...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGTCGGGTTCTTCCTGCTaGACTCCGGCTGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRSGSSC*TPAADP
Trigger: GGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGA...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGTCGGGTTCTTCCTGCTaGACTCCGGCTGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGSGSSC*TPAADP
Trigger: GGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGA...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASLQGPG*GSRARL
Trigger: CAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAG...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLLQGPG*GSRARL
Trigger: CAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAG...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGCTTCTGCTCGGTGTTaGCAGGGCCGTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERASARC*QGRPLR
Trigger: CCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGC...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCACCGCCTCCCGCCTTCTaGGAGGCTGCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ATQGRGKAQCLVWDSRPAPPPAF*EAASLW
Trigger: CCACAAGGAAGCAGCCTCCCAGAAGGCGGGAGGCGG...TGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSSGAGC*MTDCLC
Trigger: GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGA...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCACGCTTCCGGCCGCCATaGCTGCTGTGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: ATQGRGKAQCLVWDSRPARFRPP*LLWCSI
Trigger: GATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCG...TGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGGGTGAGGGCTTCCCGTaGACCCTTCTCGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRGEGFP*TLLVGS
Trigger: GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACC...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGCTGGACTCCGGCTGCTaGCCCCGGCGTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTLDSGC*PRRGQI
Trigger: GATCTGCCCACGCCGGGGTCAGCAGCCGGAGTCCAG...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCTGGACTCCGGCTGCTaGCCCCGGCGTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQLDSGC*PRRGQI
Trigger: GATCTGCCCACGCCGGGGTCAGCAGCCGGAGTCCAG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCACTCCCCCAGGTGCTaGGGGTCCTCTGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSHSPRC*GSSGKD
Trigger: GTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWGQAAG*RTASAI
Trigger: GATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCC...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPGQAAG*RTASAI
Trigger: GATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCC...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCCGGCTAGGGCCAGGCTaGAGTGGAAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSRLGPG*SGRSSS
Trigger: GCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCG...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGGACCGACCCACCTGCTaGGCAGCTACCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTDRPTC*AATPGR
Trigger: CCGGCCTGGGGTAGCTGCGCAGCAGGTGGGTCGGTC...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000421612.6
CDS-3UTR GCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGTCTCGGGTTCTTCCTaGTGGACTCCGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERVSGSS*WTPAAD
Trigger: GTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGAC...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGCTCCACCAGGGAGGCTaGCTTCTTGCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGLHQGG*LLAALR
Trigger: CCTGAGAGCTGCAAGAAGGCAGCCTCCCTGGTGGAG...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAA +
Preference number: 4 (lower is better)
Translates to: ESRVFFHIRRLPSDASAGPPPQW*PTGDRQ
Trigger: TTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGG...GCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPCWMTD*LCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERCWMTD*LCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTATTCCCAGTTTCGCCGTaGCCCTGTCCGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPHPAAPLGCERWPRVCLFPVSP*PCPGQA
Trigger: AGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAA...TAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGTCGTGGGTCTTCTGGTaGTCGGCTAGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HHRKPPPRGVERPNASSGSWVFW*SARARL
Trigger: CAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGA...CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RASRGPFSLGALSLRSGFPAPRA*LGLASS
Trigger: CGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGG...GAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCCTCAGTGTCCAGCCTaGAGGCAGCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWPQCPA*RQRQAG
Trigger: CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGG...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGACCGCCTCCCGCCTTCTaGGAGGCTGCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRPPPAF*EAASLW
Trigger: CCACAAGGAAGCAGCCTCCCAGAAGGCGGGAGGCGG...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCCTTCCTCCTCCTCAGTaGTGCCCGACGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSLPPPQ*CPTGDR
Trigger: CCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAG...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTATCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPHPAAPLGCERWPRVCLSGAGC*MTDCLC
Trigger: GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGA...TAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGSGAGC*MTDCLC
Trigger: GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGA...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ESRVFFHIRRLPSDASAGSGAGC*MTDCLC
Trigger: GCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGA...GCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCGGGGTGCGGCCTCTTaGTTCCCAGTTTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWRGAAS*FPVSPC
Trigger: GCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCG...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCGGGGTGCGGCCTCTTaGTTCCCAGTTTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPRGAAS*FPVSPC
Trigger: GCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCG...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCCGCCATGGCTGCTGTaGTGCTCCATCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSPPWLL*CSIRCE
Trigger: CTCGCACCTGATGGAGCACCACAGCAGCCATGGCGG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCCCGCCATGGCTGCTGTaGTGCTCCATCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSPPWLL*CSIRCE
Trigger: CTCGCACCTGATGGAGCACCACAGCAGCCATGGCGG...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGCCGCCATGGCTGCTGTaGTGCTCCATCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: HHRKPPPRGVERPNASSGPPWLL*CSIRCE
Trigger: CTCGCACCTGATGGAGCACCACAGCAGCCATGGCGG...CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGTTCTCGTGGGTCTTCTaGTGCTCGGCTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AESSSTSGGSPRMRALAQFSWVF*CSARAR
Trigger: CCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAA...CTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGACGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACTGCCGCCTCCCGCCTaGGAGGCTGCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPELPPPA*EAASLW
Trigger: CCACAAGGAAGCAGCCTCCCAGGCGGGAGGCGGCAG...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR TCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGTTGGGGTCGCTCTCTaGCCCCCGCGCTGCATCCCC +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVVGVAL*PPRCIP
Trigger: GGGGATGCAGCGCGGGGGTCAGAGAGCGACCCCAAC...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000421612.6
CDS-3UTR TCA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: PRMRALAQGVFTEVRASRGQAAG*RTASAI
Trigger: GATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCC...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCCGGCTAGGGCCAGGCTaGAGTGGAAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSRLGPG*SGRSSS
Trigger: GCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCG...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPVCLQR*GLPVDP
Trigger: AGGGTCCACGGGAAGCCCTCACCTCTGTAAACACAC...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGACCGACCCACCTGCTaGGCAGCTACCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PGCVYRGEGFPWTLLVGSDRPTC*AATPGR
Trigger: CCGGCCTGGGGTAGCTGCGCAGCAGGTGGGTCGGTC...GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000421612.6
CDS-3UTR GCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTCGGGACCGACCCACCTaGTGCGCAGCTACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVRDRPT*CAATPG
Trigger: GCCTGGGGTAGCTGCGCAGCAGGTGGGTCGGTCCCG...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000421612.6
CDS-3UTR GCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCAGCTCTCAGGGTACTGTaGCACCACCCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSALRVL*HHPGPD
Trigger: GTCCGGCCCTGGGTGGTGGCACAGTACCCTGAGAGC...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGGCTCTCAGGGTACTGTaGCACCACCCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWALRVL*HHPGPD
Trigger: GTCCGGCCCTGGGTGGTGGCACAGTACCCTGAGAGC...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGGGGAGGCTGCCTTCTTaGAGCTCTCAGGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGGRLPS*SSQGTV
Trigger: CACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCC...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGGGGAGGCTGCCTTCTTaGAGCTCTCAGGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRGRLPS*SSQGTV
Trigger: CACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCC...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCCTCCACCAGGGAGGCTaGCTTCTTGCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSLHQGG*LLAALR
Trigger: CCTGAGAGCTGCAAGAAGGCAGCCTCCCTGGTGGAG...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGGTGTCTCAGAAGGTaGCGGGATCTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRGCLRR*RDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCC...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATCCCCATCCTCGGGGTaGGGCCTCTTGGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGSPSSG*GLLVPS
Trigger: ACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGA...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTTCCCCATCCTCGGGGTaGGGCCTCTTGGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPSPSSG*GLLVPS
Trigger: ACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGA...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGTCCCCATCCTCGGGGTaGGGCCTCTTGGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPSPSSG*GLLVPS
Trigger: ACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGA...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGTGGTGCTCCATCAGGTaGGAGAGCCACGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWWCSIR*ESHAKA
Trigger: GGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCA...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACTGGTGCTCCATCAGGTaGGAGAGCCACGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FHIRRLPSDASAGPGCVYWCSIR*ESHAKA
Trigger: GGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCA...GTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGATGGTGCTCCATCAGGTaGGAGAGCCACGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRWCSIR*ESHAKA
Trigger: GGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCA...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTTCGTGGGTCTTCTGGTaGTCGGCTAGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPSWVFW*SARARL
Trigger: CAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGA...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGCTTCTGCTCGGTGTTaGCAGGGCCGTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWASARC*QGRPLR
Trigger: CCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGC...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGCTTCTGCTCGGTGTTaGCAGGGCCGTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSASARC*QGRPLR
Trigger: CCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGC...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCGCTTCTGCTCGGTGTTaGCAGGGCCGTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGASARC*QGRPLR
Trigger: CCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGC...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCCTCAGTGTCCAGCCTaGAGGCAGCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWPQCPA*RQRQAG
Trigger: CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGCCTCAGTGTCCAGCCTaGAGGCAGCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLPQCPA*RQRQAG
Trigger: CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGG...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCCCTCAGTGTCCAGCCTaGAGGCAGCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSPQCPA*RQRQAG
Trigger: CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGG...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACCTCAGTGTCCAGCCTaGAGGCAGCGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEPQCPA*RQRQAG
Trigger: CCCAGCCTGACGCTGCCTCCAGGCTGGACACTGAGG...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCTTCCTCCTCCTCAGTaGTGCCCGACGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASLPPPQ*CPTGDR
Trigger: CCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAG...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCCTCCTCCTCAGTaGTGCCCGACGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: DASAGPGCVYRGEGFPWTLPPPQ*CPTGDR
Trigger: CCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAG...GGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGGCCTCTGCGATCCGGTaGCAGAGTCGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDAASAIR*QSRTPR
Trigger: ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGC...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAGCCTCTGCGATCCGGTaGCAGAGTCGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEASAIR*QSRTPR
Trigger: ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGC...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGGCCTCTGCGATCCGGTaGCAGAGTCGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASASAIR*QSRTPR
Trigger: ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGC...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCGCTTCCGGCCGCCATaGCTGCTGTGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWRFRPP*LLWCSI
Trigger: GATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCTTCTCGTGGGTCTTCTaGTGCTCGGCTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSFSWVF*CSARAR
Trigger: CCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAA...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PRMRALAQGVFTEVRASRRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGTGGACCCTTCTCGTTaGGAGCGCTTAGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERVDPSR*ERLASG
Trigger: TCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCAC...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGTGAGGGCTTCCCGTaGACCCTTCTCGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSGEGFP*TLLVGS
Trigger: GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACC...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGTGGGGCGGCACTAAATaGCTGCAGGAAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGWGGTK*LQESRV
Trigger: GACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCA...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCACTCCCCCAGGTGCTaGGGGTCCTCTGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASHSPRC*GSSGKD
Trigger: GTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTG...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCCACTCCCCCAGGTGCTaGGGGTCCTCTGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QTPQEAATQGRGKAQCLVHSPRC*GSSGKD
Trigger: GTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTG...GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGCACTCCCCCAGGTGCTaGGGGTCCTCTGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASHSPRC*GSSGKD
Trigger: GTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTG...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGTCAGGCTGGGAAAGCTaGTACCCCCACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPSGWES*YPHRSS
Trigger: GCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGA...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTCGGCTAGGGCCAGGCTaGAGTGGAAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRMRALAQGVFTEVRASRRLGPG*SGRSSS
Trigger: GCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCG...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCGGCTAGGGCCAGGCTaGAGTGGAAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLRLGPG*SGRSSS
Trigger: GCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCG...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSVCLQR*GLPVDP
Trigger: AGGGTCCACGGGAAGCCCTCACCTCTGTAAACACAC...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGESGQG*LEESTG
Trigger: GCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTC...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTCCACGCGAAGGGATaGCAGACCCTCGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRLHAKG*QTLGLL
Trigger: CAGGAGGCCGAGGGTCTGGCATCCCTTCGCGTGGAG...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR GCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCCAGGGATGACCAGATaGCCAGTGGGCTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWPGMTR*PVGSGG
Trigger: ACCACCTGAGCCCACTGGGCATCTGGTCATCCCTGG...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTGTCTCGGGTTCTTCCTaGTGGACTCCGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPVSGSS*WTPAAD
Trigger: GTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGAC...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCAGCTCTCAGGGTACTGTaGCACCACCCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAALRVL*HHPGPD
Trigger: GTCCGGCCCTGGGTGGTGGCACAGTACCCTGAGAGC...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAGGGTGTCTCAGAAGGTaGCGGGATCTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEGCLRR*RDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCC...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCAGGGTGTCTCAGAAGGTaGCGGGATCTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSGCLRR*RDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCC...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGMTDCL*DPVAES
Trigger: CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCAT...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FHIRRLPSDASAGPGCVYCWMTD*LCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA...GTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQLSGAG*WMTDCL
Trigger: GAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCATTCCCAGTTTCGCCGTaGCCCTGTCCGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAFPVSP*PCPGQA
Trigger: AGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAA...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTTCCCAGTTTCGCCGTaGCCCTGTCCGGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTFPVSP*PCPGQA
Trigger: AGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAA...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGTCCCCATCCTCGGGGTaGGGCCTCTTGGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLSPSSG*GLLVPS
Trigger: ACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGA...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGTGGTGCTCCATCAGGTaGGAGAGCCACGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWWCSIR*ESHAKA
Trigger: GGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCA...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAATCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPESGRHG*CGAPSG
Trigger: ACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGA...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCATCGTGGGTCTTCTGGTaGTCGGCTAGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSSWVFW*SARARL
Trigger: CAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGA...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGTCCCGCCTGGGAGGCTaGTTCCTTGTGGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRSRLGG*FLVDLF
Trigger: AAAGAGATCCACAAGGAAGCAGCCTCCCAGGCGGGA...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR CCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCGCCCAGCAGCATCCCTaGCTCTTCCAGGACATCAGC +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGAQQHP*LFQDIS
Trigger: GCTGATGTCCTGGAAGAGCCAGGGATGCTGCTGGGC...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCTTCTGCTCGGTGTTaGCAGGGCCGTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLASARC*QGRPLR
Trigger: CCGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGC...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTTCCTCCTCCTCAGTaGTGCCCGACGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRLPPPQ*CPTGDR
Trigger: CCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAG...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACTTCCTCCTCCTCAGTaGTGCCCGACGGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRALPPPQ*CPTGDR
Trigger: CCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAG...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGGCCTCTGCGATCCGGTaGCAGAGTCGGACTCCGCGT +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTASAIR*QSRTPR
Trigger: ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGC...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACCGGGGTGCGGCCTCTTaGTTCCCAGTTTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHRGAAS*FPVSPC
Trigger: GCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCG...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGCGGGGTGCGGCCTCTTaGTTCCCAGTTTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTRGAAS*FPVSPC
Trigger: GCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCG...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACCGCCATGGCTGCTGTaGTGCTCCATCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSPPWLL*CSIRCE
Trigger: CTCGCACCTGATGGAGCACCACAGCAGCCATGGCGG...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCCGCTTCCGGCCGCCATaGCTGCTGTGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SAGPGCVYRGEGFPWTLLRFRPP*LLWCSI
Trigger: GATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCG...GAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACCGCTTCCGGCCGCCATaGCTGCTGTGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHRFRPP*LLWCSI
Trigger: GATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCG...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTTTCTCGTGGGTCTTCTaGTGCTCGGCTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPFSWVF*CSARAR
Trigger: CCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAA...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAGGTGAGGGCTTCCCGTaGACCCTTCTCGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEGEGFP*TLLVGS
Trigger: GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACC...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCGGTGAGGGCTTCCCGTaGACCCTTCTCGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASGEGFP*TLLVGS
Trigger: GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACC...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGACTCGGATGCGAGCGCTaGCCCAGGGTGTGTTTACAG +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGLGCER*PRVCLQ
Trigger: CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAG...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCTCGGATGCGAGCGCTaGCCCAGGGTGTGTTTACAG +
Preference number: 4 (lower is better)
Translates to: ESRVFFHIRRLPSDASAGLGCER*PRVCLQ
Trigger: CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAG...GCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGCGGTCTTTGCTTCTCTaGCCCTCCTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRRSLLL*PSSVPE
Trigger: TTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCG...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGCGGTCTTTGCTTCTCTaGCCCTCCTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERRSLLL*PSSVPE
Trigger: TTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCG...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCACTCCCCCAGGTGCTaGGGGTCCTCTGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQHSPRC*GSSGKD
Trigger: GTCCTTTCCAGAGGACCCTCAGCACCTGGGGGAGTG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGTCAGGCTGGGAAAGCTaGTACCCCCACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWSGWES*YPHRSS
Trigger: GCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGA...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCTCAGGCTGGGAAAGCTaGTACCCCCACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSSGWES*YPHRSS
Trigger: GCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGA...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp AGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCCGGCTAGGGCCAGGCTaGAGTGGAAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RASRGPFSLGALSLRSGFRLGPG*SGRSSS
Trigger: GCTGGAAGACCTTCCACTTCAGCCTGGCCCTAGCCG...GAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGGACAAAATTTCCACTTaGGCAACCCTGGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRDKIST*ATLGSA
Trigger: TGCGCTCCCCAGGGTTGCTCAAGTGGAAATTTTGTC...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCTCCACCAGGGAGGCTaGCTTCTTGCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWLHQGG*LLAALR
Trigger: CCTGAGAGCTGCAAGAAGGCAGCCTCCCTGGTGGAG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSSRGSM*LSYTPS
Trigger: CGATGGAGTGTACGAGAGGCACATGGACCCTCTGCT...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCAGGGTGTCTCAGAAGGTaGCGGGATCTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAGCLRR*RDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCC...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTCCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAA +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVPPPQW*PTGDRQ
Trigger: TTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGG...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSMTDCL*DPVAES
Trigger: CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCAT...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLMTDCL*DPVAES
Trigger: CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCAT...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASMTDCL*DPVAES
Trigger: CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCAT...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHLSGAG*WMTDCL
Trigger: GAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVLSGAG*WMTDCL
Trigger: GAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCATGGTGCTCCATCAGGTaGGAGAGCCACGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAWCSIR*ESHAKA
Trigger: GGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCA...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACCATGGCTGCTGTGGTaGTCCATCAGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSPWLLW*SIRCES
Trigger: GCTCTCGCACCTGATGGAGCACCACAGCAGCCATGG...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCCATGGCTGCTGTGGTaGTCCATCAGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: DASAGPGCVYRGEGFPWTPWLLW*SIRCES
Trigger: GCTCTCGCACCTGATGGAGCACCACAGCAGCCATGG...GGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGCCATGGCTGCTGTGGTaGTCCATCAGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDAPWLLW*SIRCES
Trigger: GCTCTCGCACCTGATGGAGCACCACAGCAGCCATGG...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTTCGTGGGTCTTCTGGTaGTCGGCTAGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRSWVFW*SARARL
Trigger: CAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGA...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAAAACCCACAGACCTGCTaGGCAGCTACCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GALSLRSGFRAQAEDVHKNPQTC*AATPGR
Trigger: CCGGCCTGGGGTAGCTGCGCAGCAGGTCTGTGGGTT...TTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601144.6
CDS-3UTR CCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACCACCGTCTACCCTGTTaGGGTCGCTCTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHHRLPC*GRSLTP
Trigger: GGGGGTCAGAGAGCGACCCCAACAGGGTAGACGGTG...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGACCCCGGGAACACCCTaGCCCCTTTCCCTAACGCTG +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTTPGTP*PLSLTL
Trigger: CAGCGTTAGGGAAAGGGGCCAGGGTGTTCCCGGGGT...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR CCA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGGGTCCTCTCAGGGATaGTCTCGGGTTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWGSSQG*SRVLPA
Trigger: AGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCC...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGGCCCAGCAGCATCCCTaGCTCTTCCAGGACATCAGC +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASAQQHP*LFQDIS
Trigger: GCTGATGTCCTGGAAGAGCCAGGGATGCTGCTGGGC...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGGCCCAGCAGCATCCCTaGCTCTTCCAGGACATCAGC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWAQQHP*LFQDIS
Trigger: GCTGATGTCCTGGAAGAGCCAGGGATGCTGCTGGGC...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGGTGCTGAGGGTCCTCTaGAAAGGACTTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRVLRVL*KGLQLL
Trigger: CAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCAC...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCG +
Preference number: 4 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGEAASL*ISFHQP
Trigger: CGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTC...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCGGGGTGCGGCCTCTTaGTTCCCAGTTTCGCCGTGC +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHRGAAS*FPVSPC
Trigger: GCACGGCGAAACTGGGAACCAAGAGGCCGCACCCCG...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDAAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAGTGGACCCTTCTCGTTaGGAGCGCTTAGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGVDPSR*ERLASG
Trigger: TCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCAC...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCCGTCTACCCTGTTaGGGTCGCTCTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTSRLPC*GRSLTP
Trigger: GGGGGTCAGAGAGCGACCCCAACAGGGTAGACGGGA...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421612.6
CDS-3UTR TCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACGAGAGGTGCCAGGGATaGCCAGATGCCCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHERCQG*PDAQWA
Trigger: AGCCCACTGGGCATCTGGTCATCCCTGGCACCTCTC...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACGGCACTGGAAAATGTaGCTGTCTAGCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTARHWKM*LSSQGQ
Trigger: TTGTCCCTGGCTAGACAGTCACATTTTCCAGTGCCG...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGTCAGGCTGGGAAAGCTaGTACCCCCACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQSGWES*YPHRSS
Trigger: GCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGA...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACTCAGGCTGGGAAAGCTaGTACCCCCACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHSGWES*YPHRSS
Trigger: GCTGCTCCTGTGGGGGTATCAGCTTTCCCAGCCTGA...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASVCLQR*GLPVDP
Trigger: AGGGTCCACGGGAAGCCCTCACCTCTGTAAACACAC...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAAGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPEVCLQR*GLPVDP
Trigger: AGGGTCCACGGGAAGCCCTCACCTCTGTAAACACAC...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCGTGTGTTTACAGAGGTaGGGGCTTCCCGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: QTPQEAATQGRGKAQCLVVCLQR*GLPVDP
Trigger: AGGGTCCACGGGAAGCCCTCACCTCTGTAAACACAC...GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACACCCACAGACCTGCCTaGAGGGCCCCTCACCGATCT +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHTHRPA*RAPHRS
Trigger: AGATCGGTGAGGGGCCCTGCAGGCAGGTCTGTGGGT...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR GCA 90 bp AGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCCCAGGGATGACCAGATaGCCAGTGGGCTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SAGPGCVYRGEGFPWTLLPGMTR*PVGSGG
Trigger: ACCACCTGAGCCCACTGGGCATCTGGTCATCCCTGG...GAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp AGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTCTCGGGTTCTTCCTaGTGGACTCCGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SAGPGCVYRGEGFPWTLLVSGSS*WTPAAD
Trigger: GTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGAC...GAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTGGGAGGCTGCCTTCTTaGAGCTCTCAGGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLGRLPS*SSQGTV
Trigger: CACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCC...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACCTCCACCAGGGAGGCTaGCTTCTTGCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHLHQGG*LLAALR
Trigger: CCTGAGAGCTGCAAGAAGGCAGCCTCCCTGGTGGAG...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGTGTCTCAGAAGGTaGCGGGATCTCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVGCLRR*RDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCC...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCAGTCCTCTTCGGTCTTTaGTTCTCTGACCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTAVLFGL*FSDPPL
Trigger: CAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGAC...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCG +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQMTDCL*DPVAES
Trigger: CGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCAT...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCCCATGGCTGCTGTGGTaGTCCATCAGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: RASRGPFSLGALSLRSGFPWLLW*SIRCES
Trigger: GCTCTCGCACCTGATGGAGCACCACAGCAGCCATGG...GAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGTGCTGAGGGTCCTCTaGAAAGGACTTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSVLRVL*KGLQLL
Trigger: CAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCAC...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTTCTCGTGGGTCTTCTaGTGCTCGGCTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTFSWVF*CSARAR
Trigger: CCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAA...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTTTCTCGTGGGTCTTCTaGTGCTCGGCTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRFSWVF*CSARAR
Trigger: CCTGGCCCTAGCCGAGCACCAGAAGACCCACGAGAA...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGCTTTTCTCCTTCTCGTaGGTCTTCTGGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PHPAAPLGCERWPRVCLQLFSFS*VFWCSA
Trigger: AGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAG...CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCCTTTTCTCCTTCTCGTaGGTCTTCTGGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: MPRLGFTAGKAAPPERDSLFSFS*VFWCSA
Trigger: AGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAG...GCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACTTTTCTCCTTCTCGTaGGTCTTCTGGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTALFSFS*VFWCSA
Trigger: AGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAG...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RASRGPFSLGALSLRSGFAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...GAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACGGTGAGGGCTTCCCGTaGACCCTTCTCGTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHGEGFP*TLLVGS
Trigger: GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACC...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGCTCGGATGCGAGCGCTaGCCCAGGGTGTGTTTACAG +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTLGCER*PRVCLQ
Trigger: CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAG...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACTCGGATGCGAGCGCTaGCCCAGGGTGTGTTTACAG +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRALGCER*PRVCLQ
Trigger: CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAG...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGTGGGGCGGCACTAAATaGCTGCAGGAAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWWGGTK*LQESRV
Trigger: GACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCA...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCCCACTTGAGCAACCCTaGGGAGCGCAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSPLEQP*GAQTGG
Trigger: TCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAAGTGG...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGCCACTTGAGCAACCCTaGGGAGCGCAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTTGSRHPGAWKGPMPRLPLEQP*GAQTGG
Trigger: TCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAAGTGG...CAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCGGTCCCATTTTACTAAATaGGCTGGGACCCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: VWDSRPAKRPLRNGTAQRSHFTK*AGTHGL
Trigger: CAGACCGTGGGTCCCAGCCCATTTAGTAAAATGGGA...CCGCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCCCAGTGGGCTCAGGTaGTGCCAGAACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQPSGLR*CQNPQT
Trigger: AGTCTGTGGGTTCTGGCACCACCTGAGCCCACTGGG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600404.1
CDS-3UTR TCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCGGCACTGGAAAATGTaGCTGTCTAGCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPRHWKM*LSSQGQ
Trigger: TTGTCCCTGGCTAGACAGTCACATTTTCCAGTGCCG...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp GAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCGGTCTTTGCTTCTCTaGCCCTCCTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ESRVFFHIRRLPSDASAGRSLLL*PSSVPE
Trigger: TTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCG...GCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASESGQG*LEESTG
Trigger: GCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTC...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGGAATCGGGGCAAGGGTaGCTTGAAGAAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HKHHRKPPPRGVERPNASESGQG*LEESTG
Trigger: GCCAGTGCTTTCTTCAAGTCACCCTTGCCCCGATTC...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCCCAGGGATGACCAGATaGCCAGTGGGCTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGCVYRGEGFPWTLLVGSPGMTR*PVGSGG
Trigger: ACCACCTGAGCCCACTGGGCATCTGGTCATCCCTGG...GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCG +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSSRGSM*LSYTPS
Trigger: CGATGGAGTGTACGAGAGGCACATGGACCCTCTGCT...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp CACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGTCCTCTTCGGTCTTTaGTTCTCTGACCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HIRRLPSDASAGPGCVYRVLFGL*FSDPPL
Trigger: CAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGAC...TCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVCWMTD*LCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGCVYRGEGFPWTLLVGSCWMTD*LCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCA...GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCCATGGCTGCTGTGGTaGTCCATCAGGTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHPWLLW*SIRCES
Trigger: GCTCTCGCACCTGATGGAGCACCACAGCAGCCATGG...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGCGGCACTAAATGGCTaGAGGAAAGCCGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPAALNG*RKAESS
Trigger: AGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGC...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAGCGGCACTAAATGGCTaGAGGAAAGCCGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGAALNG*RKAESS
Trigger: AGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGC...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCAGGGTCCTCTCAGGGATaGTCTCGGGTTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAGSSQG*SRVLPA
Trigger: AGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCC...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCCCAGCAGCATCCCTaGCTCTTCCAGGACATCAGC +
Preference number: 4 (lower is better)
Translates to: PGCVYRGEGFPWTLLVGSAQQHP*LFQDIS
Trigger: GCTGATGTCCTGGAAGAGCCAGGGATGCTGCTGGGC...GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGTGCTGAGGGTCCTCTaGAAAGGACTTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPVLRVL*KGLQLL
Trigger: CAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCAC...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCG +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSEAASL*ISFHQP
Trigger: CGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTC...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp AGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTGGACCCTTCTCGTTaGGAGCGCTTAGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SAGPGCVYRGEGFPWTLLVDPSR*ERLASG
Trigger: TCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCAC...GAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGCCACTTGAGCAACCCTaGGGAGCGCAAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRWERLASGADSGHRQRTPLEQP*GAQTGG
Trigger: TCCTCCTGTTTGCGCTCCCCAGGGTTGCTCAAGTGG...CGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGTCCCATTTTACTAAATaGGCTGGGACCCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: PHPAAPLGCERWPRVCLQSHFTK*AGTHGL
Trigger: CAGACCGTGGGTCCCAGCCCATTTAGTAAAATGGGA...CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTCGGTCTTTGCTTCTCTaGCCCTCCTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PRMRALAQGVFTEVRASRRSLLL*PSSVPE
Trigger: TTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCG...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCGACAAAATTTCCACTTaGGCAACCCTGGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSDKIST*ATLGSA
Trigger: TGCGCTCCCCAGGGTTGCTCAAGTGGAAATTTTGTC...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGACTGCAAGCATTTCTGTaGTCTCTGCGAGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGLQAFL*SLRATP
Trigger: TGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAG...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCG +
Preference number: 4 (lower is better)
Translates to: RASRGPFSLGALSLRSGFSRGSM*LSYTPS
Trigger: CGATGGAGTGTACGAGAGGCACATGGACCCTCTGCT...GAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR GCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCACAGCGGCTCACCTCTaGGCCTCTGGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFTAAHL*ASGGAG
Trigger: CCCCGCACCCCCAGAGGCGCAGAGGTGAGCCGCTGT...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACGGGTCCTCTCAGGGATaGTCTCGGGTTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHGSSQG*SRVLPA
Trigger: AGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCC...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp CAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCG +
Preference number: 4 (lower is better)
Translates to: QTPQEAATQGRGKAQCLVEAASL*ISFHQP
Trigger: CGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTC...GACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp TGGCTGCAGGAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGCTTTTCTCCTTCTCGTaGGTCTTCTGGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WLQESRVFFHIRRLPSDALFSFS*VFWCSA
Trigger: AGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAG...CGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTCCTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCTTTTCTCCTTCTCGTaGGTCTTCTGGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWLFSFS*VFWCSA
Trigger: AGCCGAGCACCAGAAGACCCACGAGAAGGAGAAAAG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACGTGGACCCTTCTCGTTaGGAGCGCTTAGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHVDPSR*ERLASG
Trigger: TCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCAC...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
3UTR CAA 72 bp TTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FTEVRASRGPFS*GALSLRSGFRA
Trigger: TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR TCA 90 bp CAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACTGCAAGCATTTCTGTaGTCTCTGCGAGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: QEAATQGRGKAQCLVWDSLQAFL*SLRATP
Trigger: TGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAG...TGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTCCTCTTCGGTCTTTaGTTCTCTGACCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAGPGCVYRGEGFPWTLLVLFGL*FSDPPL
Trigger: CAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGAC...GAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGGGAGCTCCCGCCTGGGAGGCTaGTTCCTTGTGGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: PGCVYRGEGFPWTLLVGSSRLGG*FLVDLF
Trigger: AAAGAGATCCACAAGGAAGCAGCCTCCCAGGCGGGA...GCTCCCAACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421612.6
ENST00000433686.6
CDS-3UTR CCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCAGTGCTGAGGGTCCTCTaGAAAGGACTTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRAVLRVL*KGLQLL
Trigger: CAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCAC...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTGTGCTGAGGGTCCTCTaGAAAGGACTTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRVLRVL*KGLQLL
Trigger: CAGAAGCTGAAGTCCTTTCCAGAGGACCCTCAGCAC...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCG +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQEAASL*ISFHQP
Trigger: CGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTC...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CCA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATCAAATAACCTAGCATaGGGCGGCACTAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGSNNLA*GGTKWL
Trigger: CAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGA...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTCGGCACTGGAAAATGTaGCTGTCTAGCCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVRHWKM*LSSQGQ
Trigger: TTGTCCCTGGCTAGACAGTCACATTTTCCAGTGCCG...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR GCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFLSGAG*WMTDCL
Trigger: GAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCGCGGCTCCCCTCGGATaGGAGCGCTGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CELLHIGKHTRGKLGNSFAAPLG*ERWPRV
Trigger: CACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGC...GAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCG +
Preference number: 4 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVEAASL*ISFHQP
Trigger: CGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTC...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCATCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RKHWQITHFKATLHCTMSSDSAS*GSCGSG
Trigger: CCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGA...TGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAATCAAATAACCTAGCATaGGGCGGCACTAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: KGPMPRLGFTAGKAAPPESNNLA*GGTKWL
Trigger: CAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGA...TTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGTCCCATTTTACTAAATaGGCTGGGACCCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQSHFTK*AGTHGL
Trigger: CAGACCGTGGGTCCCAGCCCATTTAGTAAAATGGGA...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GATGCTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATCTCCGACTCTCCGCATaGGCGCGCAGAGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DALGPCVWMLFASNAPLDLRLSA*ARRVPG
Trigger: TCCGGGAACTCTGCGCGCCCATGCGGAGAGTCGGAG...ATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp AAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCATTTCTGTGATCTCTaGGAGCTACTCCATATAGGT +
Preference number: 4 (lower is better)
Translates to: KPPPRGVERPNASSGIHGHFCDL*ELLHIG
Trigger: ACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG...GCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGTTTATTCTGCTTCATTaGTGTGTAATGCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: PHPAAPLGCERWPRVCLQFILLH*CVMLVT
Trigger: GGTCACCAGCATTACACAGCAATGAAGCAGAATAAA...CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCATTTATTCTGCTTCATTaGTGTGTAATGCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTAFILLH*CVMLVT
Trigger: GGTCACCAGCATTACACAGCAATGAAGCAGAATAAA...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp TTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACTTTGCCTTTACTACATaGTGCATTCTGGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: FHIRRLPSDASAGPGCVYFAFTT*CILAYF
Trigger: AAAGTAGGCCAGAATGCATCATGTAGTAAAGGCAAA...GTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp CTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTATTTGCCTTTACTACATaGTGCATTCTGGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: LPHPAAPLGCERWPRVCLFAFTT*CILAYF
Trigger: AAAGTAGGCCAGAATGCATCATGTAGTAAAGGCAAA...TAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCCATTTCTGTGATCTCTaGGAGCTACTCCATATAGGT +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSHFCDL*ELLHIG
Trigger: ACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTAAAAGGCTAAACAGCTaGCAAAATTTCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLKRLNS*QNFHLS
Trigger: GCTCAAGTGGAAATTTTGTCAGCTGTTTAGCCTTTT...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp TCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCAAAAGGCTAAACAGCTaGCAAAATTTCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SPRMRALAQGVFTEVRASKRLNS*QNFHLS
Trigger: GCTCAAGTGGAAATTTTGTCAGCTGTTTAGCCTTTT...GGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCGTGGAAAGGCCCAATaGCTCGTCTGGGATTCACGG +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFRGKAQ*LVWDSR
Trigger: CCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACG...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTAAGGCAACTCTACACTaGACAATGTCAAATAACCTA +
Preference number: 4 (lower is better)
Translates to: AWKGPMPRLGFTAGKAAPKATLH*TMSNNL
Trigger: TAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTT...AGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCTTTATTCTGCTTCATTaGTGTGTAATGCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RWERLASGADSGHRQRTSFILLH*CVMLVT
Trigger: GGTCACCAGCATTACACAGCAATGAAGCAGAATAAA...GGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGTTTTCAACTTATTTTaGTCACAACTTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VERPNASSGIHGRQSGPSVFNLF*SQLPSK
Trigger: CTTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAAC...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCGGCCCCTCACCGATCTaGATCTCAGCCACCTCCGGG +
Preference number: 4 (lower is better)
Translates to: CELLHIGKHTRGKLGNSFGPSPI*ISATSG
Trigger: CCCGGAGGTGGCTGAGATCCAGATCGGTGAGGGGCC...GAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR TCA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGTTTGCCTTTACTACATaGTGCATTCTGGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: DPSRWERLASGADSGHRQFAFTT*CILAYF
Trigger: AAAGTAGGCCAGAATGCATCATGTAGTAAAGGCAAA...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCG +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFSRGSM*LSYTPS
Trigger: CGATGGAGTGTACGAGAGGCACATGGACCCTCTGCT...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTAAGGCAACTCTACACTaGACAATGTCAAATAACCTA +
Preference number: 4 (lower is better)
Translates to: ASAGPGCVYRGEGFPWTLKATLH*TMSNNL
Trigger: TAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTT...AAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TCCCGTGGACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACTAGGAAACAGCTTCTaGTTTTGCAGATTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRGPFSLGALSLRSGFRALGNSF*FCRLEV
Trigger: CACTTCTAATCTGCAAAAGCAGAAGCTGTTTCCTAG...TGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CATTCTGGCCTACTTTATTCTGCTTCATTGCTGTGTAATGCTGGTGACCACTTGCGCCACCCAGGGGCGTaGAAAGGCCCAATGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HSGLLYSASLLCNAGDHLRHPGA*KGPMPR
Trigger: ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCG...CAAGTGGTCACCAGCATTACACAGCAATGAAGCAGAATAAAGTAGGCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CAA 72 bp ATGGTGACCACAGCCCCTCATAGATGCTCTGGGTCCTaGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: MVTTAPHRCSGS*CVDAVCLKCTS
Trigger: AGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATCTATGAGGGGCTGTGGTCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp CATTCTGGCCTACTTTATTCTGCTTCATTGCTGTGTAATGCTGGTGACCACTTGTCCCCATCCTCGGGGTaGGGCCTCTTGGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HSGLLYSASLLCNAGDHLSPSSG*GLLVPS
Trigger: ACTGGGAACCAAGAGGCCGCACCCCGAGGATGGGGA...CAAGTGGTCACCAGCATTACACAGCAATGAAGCAGAATAAAGTAGGCCAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCACAGCGGCTCACCTCTaGGCCTCTGGGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFTAAHL*ASGGAG
Trigger: CCCCGCACCCCCAGAGGCGCAGAGGTGAGCCGCTGT...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACAGAACCCACAGACCTaGTGCGCAGCTACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKQNPQT*CAATPG
Trigger: GCCTGGGGTAGCTGCGCAGCAGGTCTGTGGGTTCTG...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601144.6
CDS-3UTR GCA 90 bp TGGGAAAACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACACAGCCCCTCATAGATaGTCTGGGTCCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WENFPTLDTLAQGRLSMYTAPHR*SGSLCV
Trigger: CACACACAAGGACCCAGAGCATCTATGAGGGGCTGT...GTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp TTCATCAAGGTGGCTAGGTTGTCCACCCTGGCTGATGGCTGCTCTACAGTCATCAGTCACTGCCACAGATaGTCACTGAATCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: FIKVARLSTLADGCSTVISHCHR*SLNPHR
Trigger: CCTATGGGGATTCAGTGAGCATCTGTGGCAGTGACT...GATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CCA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAATCGGGTTCTTCCTGCTaGACTCCGGCTGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKSGSSC*TPAADP
Trigger: GGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGA...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR CCA 90 bp TATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCACTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: YFAHNFPARNVLHCNQFSLQGPG*GSRARL
Trigger: CAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAG...TGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TTCATCAAGGTGGCTAGGTTGTCCACCCTGGCTGATGGCTGCTCTACAGTCATCTGGAGCATTTCTACCTaGTCCTCACATTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: FIKVARLSTLADGCSTVIWSIST*SSHSQT
Trigger: GGTCTGGGAATGTGAGGACCAGGTAGAAATGCTCCA...GATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAGCCACCTTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCCTGCAAGCATTTCTGTaGTCTCTGCGAGCTACTCCA +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFLQAFL*SLRATP
Trigger: TGGAGTAGCTCGCAGAGATCACAGAAATGCTTGCAG...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCACAGCTCTCAGGGTACTGTaGCACCACCCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: FCSQLPSKKCLTLQPVLTALRVL*HHPGPD
Trigger: GTCCGGCCCTGGGTGGTGGCACAGTACCCTGAGAGC...TGTGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTCTGCTGACCCCGGCGTaGGCAGATCCGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPLLTPA*ADPAGL
Trigger: CAGCCCCGCCGGATCTGCCCACGCCGGGGTCAGCAG...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR TCA 90 bp TTCATAAGGACATGTGTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGAGGTGGAGCCAGCACTaGAGGCTTTCCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: FIRTCVPIKHLLVSFSFVRWSQH*RLSHFL
Trigger: CAAGAAGTGGGAAAGCCTTCAGTGCTGGCTCCACCT...CACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGACACATGTCCTTATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp TTCATAAGGACATGTGTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTGGCACAAGGTCGCCTaGGCATGTACCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FIRTCVPIKHLLVSFSFVWHKVA*ACTFLC
Trigger: GCACAAGAAGGTACATGCTCAGGCGACCTTGTGCCA...CACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGACACATGTCCTTATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAAGGGAGGCTGCCTTCTTaGAGCTCTCAGGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKGRLPS*SSQGTV
Trigger: CACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCC...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCCGCTTCCGGCCGCCATaGCTGCTGTGGTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFRFRPP*LLWCSI
Trigger: GATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCG...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCCTAGGTTGTCCACCCTaGCTGATGGCTGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESLGCPP*LMAALQ
Trigger: CTGTAGAGCAGCCATCAGCCAGGGTGGACAACCTAG...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CCA 90 bp TGGGAAAACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACCCAATGTGTCAACTCTaGTTTCTAGCGAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: WENFPTLDTLAQGRLSMYPMCQL*FLARAQ
Trigger: CTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGG...GTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp CTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGCAACCACAATGGTCATGGTaGCCACAGCCCCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: LSNTSSCPSPLCCSFLWQPQWSW*PQPLID
Trigger: ATCTATGAGGGGCTGTGGTCACCATGACCATTGTGG...TTGCCAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGAGGTGTTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp AGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAGCGGCACTAAATGGCTaGAGGAAAGCCGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RKHWQITHFKATLHCTMSAALNG*RKAESS
Trigger: AGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGC...TGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATTTCTTGTGTGGATGCTGTTTaGCTCAAATGCACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LWVLVCGCCLPQMHLWISCVDAV*LKCTSG
Trigger: TCCAGAGGTGCATTTGAGGCAAACAGCATCCACACA...AGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTCCGCCTCCCGCCTTCTaGGAGGCTGCTTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFAPPPAF*EAASLW
Trigger: CCACAAGGAAGCAGCCTCCCAGAAGGCGGGAGGCGG...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000601144.6
CDS-3UTR CCA 90 bp GATGCTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATCCTCAAATGCACCTCTaGATTTCTATGGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: DALGPCVWMLFASNAPLDPQMHL*ISMEHF
Trigger: GAAATGCTCCATAGAAATCCAGAGGTGCATTTGAGG...ATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp TGCTCTACAGTCATCATTTTCCTCAAGAATTTGACCGTTAGAGCCTTTCTGACAGTTGTCCACCCTGGCTaGTGGCTGCTCTACAGTCAT +
Preference number: 4 (lower is better)
Translates to: CSTVIIFLKNLTVRAFLTVVHPG*WLLYSH
Trigger: ATGACTGTAGAGCAGCCATCAGCCAGGGTGGACAAC...TGTCAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAATGATGACTGTAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp TGGGAAAACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACACCTTCGTTACATTTTaGAGGCTCATCTCCTTGTTA +
Preference number: 4 (lower is better)
Translates to: WENFPTLDTLAQGRLSMYTFVTF*RLISLL
Trigger: TAACAAGGAGATGAGCCTTCAAAATGTAACGAAGGT...GTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCGGCTCCCCTCACATGTaGATTCTCAGATGGACAATA +
Preference number: 4 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESGSPHM*ILRWTI
Trigger: TATTGTCCATCTGAGAATTCACATGTGAGGGGAGCC...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTTCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPSGRHG*CGAPSG
Trigger: ACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGA...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTTCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFASGRHG*CGAPSG
Trigger: ACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGA...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCACAAAACAGTATTTGCCTTCGTGGGTCTTCTGGTaGTCGGCTAGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QFSHLDVWVKSFTKQYLPSWVFW*SARARL
Trigger: CAGCCTGGCCCTAGCCGAGCACCAGAAGACCCACGA...AGGCAAATACTGTTTTGTGAAACTTTTCACCCATACATCTAAATGTGAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AGAAATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTCCGCCATGGCTGCTGTaGTGCTCCATCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: RNVLHCNQFSHLDVWVKSPPWLL*CSIRCE
Trigger: CTCGCACCTGATGGAGCACCACAGCAGCCATGGCGG...ACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp TGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCTCAAATAACCTAGCATaGGGCGGCACTAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: CELLHIGKHTRGKLGNSFSNNLA*GGTKWL
Trigger: CAGCCATTTAGTGCCGCCCCATGCTAGGTTATTTGA...GAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATTTCTGCTGACTGTTGTGGTTaGAGAATTTTTCACACTCCA +
Preference number: 4 (lower is better)
Translates to: LWVLVCGCCLPQMHLWISADCCG*RIFHTP
Trigger: TGGAGTGTGAAAAATTCTCCAACCACAACAGTCAGC...AGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp TTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCACAGACAAAATTTCCACTTaGGCAACCCTGGGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: FCSQLPSKKCLTLQPVLTDKIST*ATLGSA
Trigger: TGCGCTCCCCAGGGTTGCTCAAGTGGAAATTTTGTC...TGTGAGAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCGTTATGTGTGATCAATaGAGGCCTTTCTACACCCAG +
Preference number: 4 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESVMCDQ*RPFYTQ
Trigger: CTGGGTGTAGAAAGGCCTTCATTGATCACACATAAC...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp AATAACCTAGCATGGGGCGGCACTAAATGGCTGCAGGAAAGCCGAGTCTTCTTCGTTTTCAACTTATTTTaGTCACAACTTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NNLAWGGTKWLQESRVFFVFNLF*SQLPSK
Trigger: CTTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAAC...GAAGAAGACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCATGCTAGGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCGCCCAATGCCTCGTCTaGGATTCACGGCCGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFAQCLV*DSRPAK
Trigger: CTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp CTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTCCCACACTAGACACAACCTCTGGATTTCTATaGAGCATTTCTACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LVSSESTDTWENFPTLDTTSGFL*SISTWS
Trigger: GGACCAGGTAGAAATGCTCCATAGAAATCCAGAGGT...TGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CCA 90 bp GTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGGCTTCTTTCCTATGTaGGTTTTCTCATGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VPIKHLLVSFSFVLFLSLGFFPM*VFSCLV
Trigger: TACCAAGCATGAGAAAACCCACATAGGAAAGAAGCC...CAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR TCA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCTTGATGCAAAAGAGCTaGCTGTTGTGGTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESLMQKS*LLWLEN
Trigger: ATTCTCCAACCACAACAGTCAGCTCTTTTGCATCAA...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCGTCCTCTTCGGTCTTTaGTTCTCTGACCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFVLFGL*FSDPPL
Trigger: CAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGAC...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTGTGGACCCTTCTCGTTaGGAGCGCTTAGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFAVDPSR*ERLASG
Trigger: TCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCAC...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCTGGGGCGGCACTAAATaGCTGCAGGAAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFWGGTK*LQESRV
Trigger: GACTCGGCTTTCCTGCAGCCATTTAGTGCCGCCCCA...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCG +
Preference number: 4 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFSRGSM*LSYTPS
Trigger: CGATGGAGTGTACGAGAGGCACATGGACCCTCTGCT...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp TGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACTAGGAAACAGCTTCCTAGGAAACAGCTTCTaGTTTTGCAGATTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CELLHIGKHTRGKLGNSFLGNSF*FCRLEV
Trigger: CACTTCTAATCTGCAAAAGCAGAAGCTGTTTCCTAG...GAAGCTGTTTCCTAGTTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCACTAGGAAACAGCTTCTaGTTTTGCAGATTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RKHWQITHFKATLHCTMSLGNSF*FCRLEV
Trigger: CACTTCTAATCTGCAAAAGCAGAAGCTGTTTCCTAG...TGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AGAAAGCACTGGCAGATCACGCACTTTAAGGCAACTCTACACTGCACAATGTCAGAGTTTAGTCTCCTTTaGTCAGACAGACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: RKHWQITHFKATLHCTMSEFSLL*SDRQIF
Trigger: AAAGATCTGTCTGTCTGAGCAAAGGAGACTAAACTC...TGACATTGTGCAGTGTAGAGTTGCCTTAAAGTGCGTGATCTGCCAGTGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000433686.6
CDS-3UTR TCA 90 bp AGTCCAATGTGTCAACTCTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTAACACCATCCCAAGTTaGTGCTTCCATTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: SPMCQLWFLARAQILGKTNTIPS*CFHLTF
Trigger: AAAAGTCAAATGGAAGCATCAACTTGGGATGGTGTT...AGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAGAGTTGACACATTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp AGAAATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTGTCCTCTTCGGTCTTTaGTTCTCTGACCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RNVLHCNQFSHLDVWVKSVLFGL*FSDPPL
Trigger: CAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGAC...ACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp CATAAACTCTTCAACATGAAGTCTCTGACAAAGAGGAGGCAAAGAAAATCAGATGCATGTACCTTCTTGTaGTTGGTCAGACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HKLFNMKSLTKRRQRKSDACTFL*LVRQEL
Trigger: CAGCTCCTGTCTGACCAAGCACAAGAAGGTACATGC...ATCTGATTTTCTTTGCCTCCTCTTTGTCAGAGACTTCATGTTGAAGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CCA 90 bp CATAAACTCTTCAACATGAAGTCTCTGACAAAGAGGAGGCAAAGAAAATCAGATAGATCTTCATCAAGGTaGCTAGGTTGTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: HKLFNMKSLTKRRQRKSDRSSSR*LGCPPW
Trigger: CCAGGGTGGACAACCTAGCCACCTTGATGAAGATCT...ATCTGATTTTCTTTGCCTCCTCTTTGTCAGAGACTTCATGTTGAAGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CAA 72 bp CTCCTTTGTGTTGTTCCTTTCTCTGGCAATTACATGTaGTTCACTAAGGTGTGTAGAAAGGCTGAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLCVVPFSGNYM*FTKVCRKAEGV
Trigger: AACTCCTTCAGCCTTTCTACACACCTTAGTGAACAACATGTAATTGCCAGAGAAAGGAACAACACAAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp CATAAACTCTTCAACATGAAGTCTCTGACAAAGAGGAGGCAAAGAAAATCAGATATGTGGGTTTTCTCATaGTTGGTAAAGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HKLFNMKSLTKRRQRKSDMWVFS*LVKVEP
Trigger: TGGCTCCACCTTTACCAAGCATGAGAAAACCCACAT...ATCTGATTTTCTTTGCCTCCTCTTTGTCAGAGACTTCATGTTGAAGAGTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CAA 72 bp TACATGATGCATTCTGGCCTACTTTATTCTGCTTCATaGCTGTGTAATGCTGGTGACCACTTGCTAATTGAT +
Preference number: 4 (lower is better)
Translates to: YMMHSGLLYSAS*LCNAGDHLLID
Trigger: ATCAATTAGCAAGTGGTCACCAGCATTACACAGCAATGAAGCAGAATAAAGTAGGCCAGAATGCATCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
3UTR CAA 72 bp GATTTCGGTCTAACGGACAGTCCACATTCACTGTCATaGTATTCATTTCCAGAGATACTTCCATTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: DFGLTDSPHSLS*YSFPEILPLCS
Trigger: TGAACACAATGGAAGTATCTCTGGAAATGAATACAATGACAGTGAATGTGGACTGTCCGTTAGACCGAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
3UTR CAA 72 bp GATGGCTGCTCTACAGTCATCATTTTCCTCAAGAATTaGACCGTTAGAGCCTTTCTGACAATTATGTATGTA +
Preference number: 4 (lower is better)
Translates to: DGCSTVIIFLKN*TVRAFLTIMYV
Trigger: TACATACATAATTGTCAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAATGATGACTGTAGAGCAGCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR GCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCCATTTCTGTGATCTCTaGGAGCTACTCCATATAGGT +
Preference number: 4 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFHFCDL*ELLHIG
Trigger: ACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR TCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTAAAAGGCTAAACAGCTaGCAAAATTTCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFAKRLNS*QNFHLS
Trigger: GCTCAAGTGGAAATTTTGTCAGCTGTTTAGCCTTTT...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTGAGTTTAGTCTCCTTTaGTCAGACAGACAGATCTTT +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFAEFSLL*SDRQIF
Trigger: AAAGATCTGTCTGTCTGAGCAAAGGAGACTAAACTC...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000433686.6
CDS-3UTR GCA 90 bp GTCTCCTTTGCTCAGACAGACAGATCTTTATTAGTGTTTTCAACTTATTTTGCTAAGGCAACTCTACACTaGACAATGTCAAATAACCTA +
Preference number: 4 (lower is better)
Translates to: VSFAQTDRSLLVFSTYFAKATLH*TMSNNL
Trigger: TAGGTTATTTGACATTGTGCAGTGTAGAGTTGCCTT...AGCAAAATAAGTTGAAAACACTAATAAAGATCTGTCTGTCTGAGCAAAGGAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR GCA 90 bp AATGTCTTACATTGCAACCAGTTCTCACATTTAGATGTATGGGTGAAAAGTTTCGTTTTCAACTTATTTTaGTCACAACTTCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NVLHCNQFSHLDVWVKSFVFNLF*SQLPSK
Trigger: CTTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAAC...GAAACTTTTCACCCATACATCTAAATGTGAGAACTGGTTGCAATGTAAGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS GCA 90 bp GCCCCGCCCAGGGCCAGGGAGAGGAGGACCCAGCCGAGCCTCAGCTaGCGGAACAGCGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: APPRARERRTQPSLS*RNSAQGSGLWIPAG
Trigger: CCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCGCTGTTCCGGCAGCTGAGGCTCGGCTGGGTCCTCCTCTCCCTGGCCCTGGGCGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 90 bp CTCCTGCCGCCTCCCGCCTTCTGGAACAAGGTCAGAGCCCTAGCGTaGGCGCCCCGCCCAGGGCCAGGGAGAGGAGGACCCAGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: LLPPPAFWNKVRALA*APRPGPGRGGPSRA
Trigger: GGCTCGGCTGGGTCCTCCTCTCCCTGGCCCTGGGCGGGGCGCTCACGCTAGGGCTCTGACCTTGTTCCAGAAGGCGGGAGGCGGCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp GCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTaGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAGCGCATGCCC +
Preference number: 5 (lower is better)
Translates to: AQGSGLWIPAGLTAV*KQRCPSQAALQRMP
Trigger: GGGCATGCGCTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp ACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGGGCCTTCCCAGGCTGCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TDCLCDPVAESDSAS*GSCGSGAFPGCSSS
Trigger: GGAGGAAGAGCAGCCTGGGAAGGCCCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp AGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SFAVPLSGAGCWMTD*LCDPVAESDSASWG
Trigger: CCCCCAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp TCCAGGTCAGCAGGGGTCCTCTCAGGGATGGTCTCGGGTTCTTCCTaGTGGACTCCGGCTGCTGACCCCGGCGTGGGCAGATCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SRSAGVLSGMVSGSS*WTPAADPGVGRSGG
Trigger: CCCGCCGGATCTGCCCACGCCGGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCCCTGCTGACCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS-3UTR CAA 90 bp GCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGTCGGGGTGCGGCCTCTaGGTTCCCAGTTTCGCCGTG +
Preference number: 5 (lower is better)
Translates to: AQCLVWDSRPAKRPLRNGSGCGL*VPSFAV
Trigger: CACGGCGAAACTGGGAACCAAGAGGCCGCACCCCGA...CCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS TCA 90 bp TGGTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGT +
Preference number: 5 (lower is better)
Translates to: WFPVSPCPCPGQAAG*RTASAIRWQSRTPR
Trigger: ACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp GGCCTCTTGGTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGAC +
Preference number: 5 (lower is better)
Translates to: GLLVPSFAVPLSGAG*WMTDCLCDPVAESD
Trigger: GTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAACCAAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp TCTTCCAGCAGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGTGCGAGAGCCACGCGAAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SSSSPDRRSASGRHG*CGAPSGARATRRPP
Trigger: GGGAGGCCTTCGCGTGGCTCTCGCACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCTGCTGGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp GAGCTCCCTGTGGCCAGGTGCCCTCAAGGGTCAAGGAGCCCCCGCTaGCTCCCACACAGGCCCCAGTGTGCTTCTGTGACAGCAGCACCC +
Preference number: 5 (lower is better)
Translates to: ELPVARCPQGSRSPR*LPHRPQCASVTAAP
Trigger: GGGTGCTGCTGTCACAGAAGCACACTGGGGCCTGTGTGGGAGGCAGCGGGGGCTCCTTGACCCTTGAGGGCACCTGGCCACAGGGAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596372.1
ENST00000598497.1
CDS CCA 90 bp GTGTCTCAGAAGGTGCCGGGATCTCCCCAGCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTGGTAGCAGCAGAGGGTCCATGTGCC +
Preference number: 5 (lower is better)
Translates to: VSQKVPGSPQLQGPG*GSRARLVAAEGPCA
Trigger: GGCACATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTTCTGAGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 90 bp CAGGGTGTCTCAGAAGGTGCCGGGATCTCCCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCGCCTGGTAGCAGCAGAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: QGVSEGAGISPAPRA*LGLASSPGSSRGSM
Trigger: CATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTTCTGAGACACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000600404.1
ENST00000601144.6
CDS CCA 90 bp TGCCAGAACCCACAGACCCTCACTAGGCCTTGGCTCCGCGACCGGTaGGCGGGAACGGAGGAAACAGACCCGAGAGGCCGCGAGAGGACG +
Preference number: 5 (lower is better)
Translates to: CQNPQTLTRPWLRDR*AGTEETDPRGRERT
Trigger: CGTCCTCTCGCGGCCTCTCGGGTCTGTTTCCTCCGTTCCCGCCCACCGGTCGCGGAGCCAAGGCCTAGTGAGGGTCTGTGGGTTCTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595721.1
CDS CCA 90 bp AACGCAGGCGGGAGAACTCCAGGTCAGCAGGGGTCCTCTCAGGGATaGTCTCGGGTTCTTCCTGCTGGACTCCGGCTGCTGACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: NAGGRTPGQQGSSQG*SRVLPAGLRLLTPA
Trigger: CGCCGGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCCCTGCTGACCTGGAGTTCTCCCGCCTGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 90 bp CTCTTGGTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGCGATCCGGTGGCAGAGTCGGACTCC +
Preference number: 5 (lower is better)
Translates to: LLVPSFAVPLSGAGC*MTDCLCDPVAESDS
Trigger: GGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAACCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 90 bp CCCCCTTCGCACCACAAAGATTCCGCCCTCACGCTCCCACCAGGGTaGGTTCTGGGCCTCAGCGCTGTGGACGTTTGGGGCCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: PPSHHKDSALTLPPG*VLGLSAVDVWGHSP
Trigger: AGGGCTGTGGCCCCAAACGTCCACAGCGCTGAGGCCCAGAACCCACCCTGGTGGGAGCGTGAGGGCGGAATCTTTGTGGTGCGAAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594191.5
ENST00000598497.1
CDS CCA 90 bp TCACGTGTCTCAGAAGGTGCCGGGATCTCCCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCGCCTGGTAGCAGCAGAGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: SRVSEGAGISPAPRA*LGLASSPGSSRGSM
Trigger: CATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTTCTGAGACACGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS-3UTR CAA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCTCGGGGTGCGGCCTCTaGGTTCCCAGTTTCGCCGTG +
Preference number: 5 (lower is better)
Translates to: VERPNASSGIHGRQSGPSSGCGL*VPSFAV
Trigger: CACGGCGAAACTGGGAACCAAGAGGCCGCACCCCGA...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS GCA 90 bp CAGGCTAGGAGCCAGCCCTGGCCAGGGACTCTAACCCAGGTGCACTaGAGGAGGCAGCCCCCTTCGCACCACAAAGATTCCGCCCTCACG +
Preference number: 5 (lower is better)
Translates to: QARSQPWPGTLTQVH*RRQPPSHHKDSALT
Trigger: CGTGAGGGCGGAATCTTTGTGGTGCGAAGGGGGCTGCCTCCTGCAGTGCACCTGGGTTAGAGTCCCTGGCCAGGGCTGGCTCCTAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS GCA 90 bp GAGTGGCTGATGGGTGTTGTGTGTCGTGGGCCAGCCAGGGCAGGCTaGAGCCCACCTCCTCTTCTCTGTACTGGGACCCCCACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: EWLMGVVCRGPARAG*SPPPLLCTGTPTKA
Trigger: GGCCTTGGTGGGGGTCCCAGTACAGAGAAGAGGAGGTGGGCTGCAGCCTGCCCTGGCTGGCCCACGACACACAACACCCATCAGCCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp TGCCCAACACCCCACCTAAGGCCCAGCAGAGGCTGCCAGGCTAGCTaGGCACTCACGTGTCTCAGAAGGTGCCGGGATCTCCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CPTPHLRPSRGCQAS*ALTCLRRCRDLPSS
Trigger: GGAGCTGGGGAGATCCCGGCACCTTCTGAGACACGTGAGTGCCCAGCTAGCCTGGCAGCCTCTGCTGGGCCTTAGGTGGGGTGTTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 90 bp GCACCCAGGGCCCTCCAGCCCAAGTCCGCCTCTAGGTGTTCTTGTTaGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAACGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: APRALQPKSASRCSC*CAGTEPPMGQNGHP
Trigger: GGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACACCTAGAGGCGGACTTGGGCTGGAGGGCCCTGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp ACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAAGCTTCTGCTCGGTGTaGGCAGGGCCGTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: TTGSRHPGAWKGPMPRLGSFCSV*AGPSSS
Trigger: CGAAGAGGACGGCCCTGCCAACACCGAGCAGAAGCT...TCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp TGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: WKGPMPRLGFTAGKAAPPRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...CGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp ACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TPQEAATQGRGKAQCLVWRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...CCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS TCA 90 bp CTCCAACAACGGAGGCCACCGACAGGACAGGAAGGACAGCCCCACTaGGCCCGGGTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LQQRRPPTGQEGQPH*ARVLETAPLEVSTW
Trigger: CCAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTCCGTTGTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp GACCCTTCTCGTTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGTCGGGGTGCGGCCTCTaGGTTCCCAGTTTCGCCGTG +
Preference number: 5 (lower is better)
Translates to: DPSRWERLASGADSGHRQSGCGL*VPSFAV
Trigger: CACGGCGAAACTGGGAACCAAGAGGCCGCACCCCGA...CTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAACGAGAAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTATCCCGTCTACCCTGTaGGGGTCGCTCTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: PRMRALAQGVFTEVRASRIPSTL*GSLSDP
Trigger: GGGGTCAGAGAGCGACCCCAACAGGGTAGACGGGAT...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421612.6
CDS CCA 90 bp GTGGTGCCAGAACCCACAGACCTGCAGAGGACACGGACAAGGCAATaGCCTTGCATAAGGCCAGGGCGCAGCCACCCCAGCTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VVPEPTDLQRTRTRQ*PCIRPGRSHPSCQR
Trigger: TCTCTGGCAGCTGGGGTGGCTGCGCCCTGGCCTTATGCAAGGCCATTGCCTTGTCCGTGTCCTCTGCAGGTCTGTGGGTTCTGGCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp GTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCAGGGAGGCTGCCTTCTaGCAGCTCTCAGGGTACTGT +
Preference number: 5 (lower is better)
Translates to: VERPNASSGIHGRQSGPSREAAF*QLSGYC
Trigger: ACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCCT...GGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACTCGGGGTGCGGCCTCTaGGTTCCCAGTTTCGCCGTG +
Preference number: 5 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHSGCGL*VPSFAV
Trigger: CACGGCGAAACTGGGAACCAAGAGGCCGCACCCCGA...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp TTGGGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LGALSLRSGFRAQAEDVHRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...GTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp ACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TNTTGSRHPGAWKGPMPRRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...ACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS CCA 90 bp AAAGAGGAGACCCTTGATCAGGCCATGCAGGTGAGGCCCTGTATCTaGCAAGGAGGGTGGCAATGTGGGCGCCTTGGGGCCAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KEETLDQAMQVRPCI*QGGWQCGRLGARRP
Trigger: AGGCCTCCTGGCCCCAAGGCGCCCACATTGCCACCCTCCTTGCCAGATACAGGGCCTCACCTGCATGGCCTGATCAAGGGTCTCCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS-3UTR CAA 90 bp GCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAACACCGTGGACCCTTCTCGTaGGGAGCGCTTAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ALSLRSGFRAQAEDVHKHRGPFS*GALSLR
Trigger: CCTGAGGCTAAGCGCTCCCAACGAGAAGGGTCCACG...GTGTTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp GAAAGCCGAGTCTTCTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCGGGGCAAGGGTGACTaGAAGAAAGCACTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: ESRVFFHIRRLPSDASAGRGKGD*KKALAD
Trigger: ATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCG...GCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAGAAGACTCGGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS TCA 90 bp TGTCTAGCCAGGGACAAGGTGGCTCCAAAGGAGAGGTGCCAGGGATaGCCAGATGCCCAGTGGGCTCAGGTGGTGCCAGAACCCACAGAC +
Preference number: 5 (lower is better)
Translates to: CLARDKVAPKERCQG*PDAQWAQVVPEPTD
Trigger: GTCTGTGGGTTCTGGCACCACCTGAGCCCACTGGGCATCTGGTCATCCCTGGCACCTCTCCTTTGGAGCCACCTTGTCCCTGGCTAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000595721.1
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601063.1
ENST00000601144.6
CDS GCA 90 bp TGGCTGGGGCTCGCGAGCTCGCCTGGTAGCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCGCTAAGAATTGAGGATGAGCCCGCA +
Preference number: 5 (lower is better)
Translates to: WLGLASSPGSSRGSM*LSYTPSLRIEDEPA
Trigger: TGCGGGCTCATCCTCAATTCTTAGCGATGGAGTGTACGAGAGGCACATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS GCA 90 bp CCAGAACCCACAGACCTGCAGAGGACACGGACAAGGCAATGGCCTTaGATAAGGCCAGGGCGCAGCCACCCCAGCTGCCAGAGAACAAAG +
Preference number: 5 (lower is better)
Translates to: PEPTDLQRTRTRQWP*IRPGRSHPSCQRTK
Trigger: CTTTGTTCTCTGGCAGCTGGGGTGGCTGCGCCCTGGCCTTATGCAAGGCCATTGCCTTGTCCGTGTCCTCTGCAGGTCTGTGGGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp GGTGAGGCCCTGTATCTGGCAAGGAGGGTGGCAATGTGGGCGCCTTaGGGCCAGGAGGCCTTTCCAAATTCCGAGGCTTCAGTCCTACAG +
Preference number: 5 (lower is better)
Translates to: GEALYLARRVAMWAP*GQEAFPNSEASVLQ
Trigger: CTGTAGGACTGAAGCCTCGGAATTTGGAAAGGCCTCCTGGCCCCAAGGCGCCCACATTGCCACCCTCCTTGCCAGATACAGGGCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CCA 90 bp CCGCCTCTAGGTGTTCTTGTTGGTGTGCTGGCACAGAGCCTCCAATaGGGCAGAACGGCCACCCCCGGGACCAGTCATACACAGATCCTG +
Preference number: 5 (lower is better)
Translates to: PPLGVLVGVLAQSLQ*GRTATPGTSHTQIL
Trigger: CAGGATCTGTGTATGACTGGTCCCGGGGGTGGCCGTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACACCTAGAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp CACAAACACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGCGGGGCAAGGGTGACTaGAAGAAAGCACTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: HKHHRKPPPRGVERPNASRGKGD*KKALAD
Trigger: ATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCG...CGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS GCA 90 bp CAGGTCCCTTGGCCTGGGCAGAGCTGGCTCAGTGTGTGTGGACTGTaGAAACAGTGCAGTTCTGCTGAGGGGTATGCTGGCTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: QVPWPGQSWLSVCGL*KQCSSAEGYAGCAS
Trigger: TGAGGCACAGCCAGCATACCCCTCAGCAGAACTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS CCA 90 bp AGCACGCGATGCTGGGCAACTAAAGAACCAGACCCAACCACAGCCTaGGGGACCCACCCCTCGAACAGCAAGCACTCAGACACAGCACAC +
Preference number: 5 (lower is better)
Translates to: STRCWATKEPDPTTA*GTHPSNSKHSDTAH
Trigger: GTGTGCTGTGTCTGAGTGCTTGCTGTTCGAGGGGTGGGTCCCCCAGGCTGTGGTTGGGTCTGGTTCTTTAGTTGCCCAGCATCGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 90 bp GTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTGGCCACTAGCTTaGCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAGAGCGCAC +
Preference number: 5 (lower is better)
Translates to: VLETAPLEVSTWPLA*PQDARCKESLLRAH
Trigger: GTGCGCTCTGAGCAGGCTCTCCTTGCATCGTGCATCTTGTGGCCAAGCTAGTGGCCAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp GGAGCGCTTAGCCTCAGGAGCGGATTCAGGGCACAGGCAGAGGACGTCCACAAAAGGGAGGCTGCCTTCTaGCAGCTCTCAGGGTACTGT +
Preference number: 5 (lower is better)
Translates to: GALSLRSGFRAQAEDVHKREAAF*QLSGYC
Trigger: ACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCCT...TTTGTGGACGTCCTCTGCCTGTGCCCTGAATCCGCTCCTGAGGCTAAGCGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000600404.1
ENST00000601144.6
CDS-3UTR CAA 90 bp GCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGACCCTTCTCGTTAGGGAGGCTGCCTTCTaGCAGCTCTCAGGGTACTGT +
Preference number: 5 (lower is better)
Translates to: AGPGCVYRGEGFPWTLLVREAAF*QLSGYC
Trigger: ACAGTACCCTGAGAGCTGCAAGAAGGCAGCCTCCCT...AACGAGAAGGGTCCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS TCA 90 bp TTCACTCCAAGGGGCAGAGAGCCCACCTCTAGGATGGGGATGGGCTaGGCACGCGATGCTGGGCAACTAAAGAACCAGACCCAACCACAG +
Preference number: 5 (lower is better)
Translates to: FTPRGREPTSRMGMG*ARDAGQLKNQTQPQ
Trigger: CTGTGGTTGGGTCTGGTTCTTTAGTTGCCCAGCATCGCGTGCTCAGCCCATCCCCATCCTAGAGGTGGGCTCTCTGCCCCTTGGAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 90 bp GAGCGAGACTCCAGGAGAGTAAGGGTTCTTCACAGGCAGGTCCCTTaGCCTGGGCAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAG +
Preference number: 5 (lower is better)
Translates to: ERDSRRVRVLHRQVP*PGQSWLSVCGLCKQ
Trigger: CTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTGCCTGTGAAGAACCCTTACTCTCCTGGAGTCTCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601063.1
CDS CCA 90 bp CAGACCCAGGAGAGTAAGGGTTCTTCACAGGCAGGTCCCTTGGCCTaGGCAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAGTGCAG +
Preference number: 5 (lower is better)
Translates to: QTQESKGSSQAGPLA*AELAQCVWTVQTVQ
Trigger: CTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTGCCTGTGAAGAACCCTTACTCTCCTGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600897.5
CDS CCA 90 bp ACCCACAGACCCAGGAGAGTAAGGGTTCTTCACAGGCAGGTCCCTTaGCCTGGGCAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAG +
Preference number: 5 (lower is better)
Translates to: THRPRRVRVLHRQVP*PGQSWLSVCGLCKQ
Trigger: CTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTGCCTGTGAAGAACCCTTACTCTCCTGGGTCTGTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600897.5
CDS-3UTR CAA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGCTTTATTCTGCTTCATaGCTGTGTAATGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERLYSAS*LCNAGD
Trigger: GTCACCAGCATTACACAGCAATGAAGCAGAATAAAG...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS TCA 90 bp CACCACACACACAGAGCCCGACCCCAGGCCCTGATTATGCATGTGTaGTGTGCAGGGAGACATGAGGGGACGTGCATCAGGACACTTGAG +
Preference number: 5 (lower is better)
Translates to: HHTHRARPQALIMHV*CAGRHEGTCIRTLE
Trigger: CTCAAGTGTCCTGATGCACGTCCCCTCATGTCTCCCTGCACATCACACATGCATAATCAGGGCCTGGGGTCGGGCTCTGTGTGTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 90 bp AGACTCCAGGAGAGTAAGGGTTCTTCACAGGCAGGTCCCTTGGCCTaGGCAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAGTGCAG +
Preference number: 5 (lower is better)
Translates to: RLQESKGSSQAGPLA*AELAQCVWTVQTVQ
Trigger: CTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTGCCTGTGAAGAACCCTTACTCTCCTGGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601063.1
CDS-3UTR CAA 90 bp TCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCACAGCAGATTAGAAGTGAAGTaGACATCACGCCAAGTACGA +
Preference number: 5 (lower is better)
Translates to: SSGIHGRQSGPSGTGQHSRLEVK*TSRQVR
Trigger: TCGTACTTGGCGTGATGTCAACTTCACTTCTAATCT...GCTGTGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp GCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGATTCACGGCCGAATGCTGGTGACCACTaGCTAATTGATTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: AATQGRGKAQCLVWDSRPNAGDH*LIDFPF
Trigger: AAATGGGAAATCAATTAGCAAGTGGTCACCAGCATT...CGGCCGTGAATCCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS GCA 90 bp CCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTaGTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTCCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: PPGPNTNSTQPHLGG*FLVDLFPPTGVPQC
Trigger: ACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAATTGGTGTTAGGGCCGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp AGAGTAAGGGTTCTTCACAGGCAGGTCCCTTGGCCTGGGCAGAGCTaGCTCAGTGTGTGTGGACTGTGCAAACAGTGCAGTTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RVRVLHRQVPWPGQS*LSVCGLCKQCSSAE
Trigger: CTCAGCAGAACTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCAAGGGACCTGCCTGTGAAGAACCCTTACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS CCA 90 bp AAGTTCAAATCCTGTAAGACATCACAGTGTCCCAGCCAAAGTCCCTaGGGTCACAGTCTCCTGCACCAACCCCTGCGGAAGGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: KFKSCKTSQCPSQSP*GHSLLHQPLRKGMG
Trigger: CCCCATCCCCTTCCGCAGGGGTTGGTGCAGGAGACTGTGACCCCAGGGACTTTGGCTGGGACACTGTGATGTCTTACAGGATTTGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CCA 90 bp AGCAAACCCCACCCGGCCCTAACACCAATTCAACCCAACCTCACCTaGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAACCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SKPHPALTPIQPNLT*EAASLWISFHQPEF
Trigger: GAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAATTGGTGTTAGGGCCGGGTGGGGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS-3UTR CAA 90 bp CTTCCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTAAGATTAGAAGTGAAGTaGACATCACGCCAAGTACGA +
Preference number: 5 (lower is better)
Translates to: LPHPAAPLGCERWPRVCLRLEVK*TSRQVR
Trigger: TCGTACTTGGCGTGATGTCAACTTCACTTCTAATCT...TAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp CACCACAGGAAGCCGCCACCCAGGGGCGTGGAAAGGCCCAATGCCTCGTCTGGGAATGCTGGTGACCACTaGCTAATTGATTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: HHRKPPPRGVERPNASSGNAGDH*LIDFPF
Trigger: AAATGGGAAATCAATTAGCAAGTGGTCACCAGCATT...CCCAGACGAGGCATTGGGCCTTTCCACGCCCCTGGGTGGCGGCTTCCTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp GGCCCAATGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGTGTTTTCAACTTATTTaGCTCACAACTTCCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GPMPRLGFTAGKAAPPERCFQLI*LTTSQQ
Trigger: TTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAACA...CCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCATTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS CCA 90 bp GGAGGCCTTTCCAAATTCCGAGGCTTCAGTCCTACAGGCAGGGCCTaGGCAGAACTCAGATGTTTAGATCAGAAAGGGTGGGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GGLSKFRGFSPTGRA*AELRCLDQKGWGLQ
Trigger: CTGAAGCCCCCACCCTTTCTGATCTAAACATCTGAGTTCTGCCCAGGCCCTGCCTGTAGGACTGAAGCCTCGGAATTTGGAAAGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS-3UTR CAA 90 bp CCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTAGATTAGAAGTGAAGTaGACATCACGCCAAGTACGA +
Preference number: 5 (lower is better)
Translates to: PRMRALAQGVFTEVRASRRLEVK*TSRQVR
Trigger: TCGTACTTGGCGTGATGTCAACTTCACTTCTAATCT...ACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp TCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGAGGTGAGGGCTTCCCGTGGCTTTATTCTGCTTCATaGCTGTGTAATGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SDASAGPGCVYRGEGFPWLYSAS*LCNAGD
Trigger: GTCACCAGCATTACACAGCAATGAAGCAGAATAAAG...CCACGGGAAGCCCTCACCTCTGTAAACACACCCTGGGCCAGCGCTCGCATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp TGCCTCGTCTGGGATTCACGGCCGGCAAAGCGGCCCCTCCGGAACGGGACAGCATGTTTTCAACTTATTTaGCTCACAACTTCCCAGCAA +
Preference number: 5 (lower is better)
Translates to: CLVWDSRPAKRPLRNGTACFQLI*LTTSQQ
Trigger: TTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAACA...TGCTGTCCCGTTCCGGAGGGGCCGCTTTGCCGGCCGTGAATCCCAGACGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp CCACATCCGGCGGCTCCCCTCGGATGCGAGCGCTGGCCCAGGGTGTGTTTACAGTGTTTTCAACTTATTTaGCTCACAACTTCCCAGCAA +
Preference number: 5 (lower is better)
Translates to: PHPAAPLGCERWPRVCLQCFQLI*LTTSQQ
Trigger: TTGCTGGGAAGTTGTGAGCAAAATAAGTTGAAAACA...CTGTAAACACACCCTGGGCCAGCGCTCGCATCCGAGGGGAGCCGCCGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS GCA 90 bp TGGCCTGGGCAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAGTaGAGTTCTGCTGAGGGGTATGCTGGCTGTGCCTCATTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WPGQSWLSVCGLCKQ*SSAEGYAGCASFVF
Trigger: AAAAACAAATGAGGCACAGCCAGCATACCCCTCAGCAGAACTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTGCCCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS CCA 90 bp CTAACACCAATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LTPIQPNLTWEAASL*ISFHQPEFLSVQPG
Trigger: TCCAGGCTGGACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAATTGGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 90 bp CTGGCAACTAACACCACTGCCGTTTCCACCGACCAAGTCTTGGGGTaGTCTGTCATGCAGCAAGAGACCATGGACGTAACTGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: LATNTTAVSTDQVLG*SVMQQETMDVTGFL
Trigger: CAGGAATCCAGTTACGTCCATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTTGGTCGGTGGAAACGGCAGTGGTGTTAGTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 90 bp GAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAGTGCAGTTCTGCTaGGGGGTATGCTGGCTGTGCCTCATTTGTTTTTGGCAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: ELAQCVWTVQTVQFC*GVCWLCLICFWQLW
Trigger: CCACAACTGCCAAAAACAAATGAGGCACAGCCAGCATACCCCTCAGCAGAACTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS TCA 90 bp TTTTATGTGAAATGTCGAACTCACACACCACTTGCCCAGTGGTCCTaGGGAGTCCACCCACAGTGCCCAGAGCCTCACATATGGGCACAC +
Preference number: 5 (lower is better)
Translates to: FYVKCRTHTPLAQWS*GVHPQCPEPHIWAH
Trigger: GTGTGCCCATATGTGAGGCTCTGGGCACTGTGGGTGGACTCCTCAGGACCACTGGGCAAGTGGTGTGTGAGTTCGACATTTCACATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS TCA 90 bp GCCTTCTCCAAAGGCAACATCTTTCCAAAACGGCACTGGAAAATGTaGCTGTCTAGCCAGGGACAAGGTGGCTCCAAAGGAGAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: AFSKGNIFPKRHWKM*LSSQGQGGSKGEVP
Trigger: TGGCACCTCTCCTTTGGAGCCACCTTGTCCCTGGCTAGACAGTCACATTTTCCAGTGCCGTTTTGGAAAGATGTTGCCTTTGGAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000595721.1
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601063.1
ENST00000601144.6
CDS CCA 90 bp ACAGGCAGGGCCTGGGCAGAACTCAGATGTTTAGATCAGAAAGGGTaGGGGCTTCAGCGAATAAATTCAAGCTCCAACACGTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TGRAWAELRCLDQKG*GLQRINSSSNTCKF
Trigger: GAACTTGCACGTGTTGGAGCTTGAATTTATTCGCTGAAGCCCCCACCCTTTCTGATCTAAACATCTGAGTTCTGCCCAGGCCCTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS-3UTR CAA 90 bp CTCTGGGTCCTTGTGTGTGGATGCTGTTTGCCTCAAATGCACCTCTGGATTTCTGTGTGTGGATGCTGTTaGCCTCAAATGCACCTCTGG +
Preference number: 5 (lower is better)
Translates to: LWVLVCGCCLPQMHLWISVCGCC*PQMHLW
Trigger: CCAGAGGTGCATTTGAGGCAAACAGCATCCACACAC...AGAAATCCAGAGGTGCATTTGAGGCAAACAGCATCCACACACAAGGACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS GCA 90 bp ATGGAAGTTTCTATTTTATGTGAAATGTCGAACTCACACACCACTTaGCCAGTGGTCCTGAGGAGTCCACCCACAGTGCCCAGAGCCTCA +
Preference number: 5 (lower is better)
Translates to: MEVSILCEMSNSHTT*PVVLRSPPTVPRAS
Trigger: TGAGGCTCTGGGCACTGTGGGTGGACTCCTCAGGACCACTGGGCAAGTGGTGTGTGAGTTCGACATTTCACATAAAATAGAAACTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS-3UTR CAA 90 bp TGGGAAAACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACTCGTGTCCTTCTCCTTaGTGTTGTTCCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: WENFPTLDTLAQGRLSMYSCPSP*CCSFLW
Trigger: CCAGAGAAAGGAACAACACAAAGGAGAAGGACACGA...GTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp ACTTATTTTGCTCACAACTTCCCAGCAAGAAATGTCTTACATTGCAACCAGTTCTCACCGTCTACCCTGTaGGGGTCGCTCTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: TYFAHNFPARNVLHCNQFSPSTL*GSLSDP
Trigger: GGGGTCAGAGAGCGACCCCAACAGGGTAGACGGTGA...GAACTGGTTGCAATGTAAGACATTTCTTGCTGGGAAGTTGTGAGCAAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000240727.10
CDS-3UTR CAA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAACGGGGCAAGGGTGACTaGAAGAAAGCACTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKRGKGD*KKALAD
Trigger: ATCTGCCAGTGCTTTCTTCAAGTCACCCTTGCCCCG...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS-3UTR CAA 90 bp CTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGCAAAGATGCTCTGGGTCCTaGTGTGTGGATGCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LSNTSSCPSPLCCSFLWQRCSGS*CVDAVC
Trigger: GCAAACAGCATCCACACACAAGGACCCAGAGCATCT...TTGCCAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGAGGTGTTTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS GCA 90 bp CAGAAAGGGTGGGGGCTTCAGCGAATAAATTCAAGCTCCAACACGTaGAAGTTCAAATCCTGTAAGACATCACAGTGTCCCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QKGWGLQRINSSSNT*KFKSCKTSQCPSQS
Trigger: ACTTTGGCTGGGACACTGTGATGTCTTACAGGATTTGAACTTGCACGTGTTGGAGCTTGAATTTATTCGCTGAAGCCCCCACCCTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS-3UTR CAA 90 bp TGCTCTACAGTCATCATTTTCCTCAAGAATTTGACCGTTAGAGCCTTTCTGACAATCAAGGTGGCTAGGTaGTCCACCCTGGCTGATGGC +
Preference number: 5 (lower is better)
Translates to: CSTVIIFLKNLTVRAFLTIKVAR*STLADG
Trigger: GCCATCAGCCAGGGTGGACAACCTAGCCACCTTGAT...TGTCAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAATGATGACTGTAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp AAGAGGAGGCAAAGAAAATCAGATCAGTCACTGCCACAGATGCTCACTGAATCCGTTCACAGAAACCTGTaGTTTGAGGACCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: KRRQRKSDQSLPQMLTESVHRNL*FEDLFD
Trigger: GTCAAAGAGGTCCTCAAACAACAGGTTTCTGTGAAC...GGATTCAGTGAGCATCTGTGGCAGTGACTGATCTGATTTTCTTTGCCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp CTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGTTGTTCCTTTCTCTGGCAACAACACCATCCCAAGTaGATGCTTCCATTTGACTTT +
Preference number: 5 (lower is better)
Translates to: LSNTSSCPSPLCCSFLWQQHHPK*MLPFDF
Trigger: AAAGTCAAATGGAAGCATCAACTTGGGATGGTGTTG...TTGCCAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGAGGTGTTTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp AACTTTCCCACACTAGACACACTGGCACAAGGTCGCCTGAGCATGTACCTTCTTCCACATTCACTGTCATaGTATTCATTTCCAGAGATA +
Preference number: 5 (lower is better)
Translates to: NFPTLDTLAQGRLSMYLLPHSLS*YSFPEI
Trigger: TATCTCTGGAAATGAATACAATGACAGTGAATGTGG...AAGAAGGTACATGCTCAGGCGACCTTGTGCCAGTGTGTCTAGTGTGGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp TTCATAAGGACATGTGTCCCTATCAAACACCTCCTCGTGTCCTTCTCCTTTGTGATTTTCCTCAAGAATTaGACCGTTAGAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FIRTCVPIKHLLVSFSFVIFLKN*TVRAFL
Trigger: CAGAAAGGCTCTAACGGTCAAATTCTTGAGGAAAAT...CACAAAGGAGAAGGACACGAGGAGGTGTTTGATAGGGACACATGTCCTTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp CTGGTTTCTAGCGAGAGCACAGATACTTGGGAAAACTTTCCCACACTAGACACATCTGGCAATTACATGTaGTTCACTAAGGTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: LVSSESTDTWENFPTLDTSGNYM*FTKVCR
Trigger: TCTACACACCTTAGTGAACAACATGTAATTGCCAGA...TGTGTCTAGTGTGGGAAAGTTTTCCCAAGTATCTGTGCTCTCGCTAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595944.1
CDS-3UTR CAA 90 bp CATTTCTGTGATCTCTGCGAGCTACTCCATATAGGTAAACACACGCGAGGTAAAAATGCTGGTGACCACTaGCTAATTGATTTCCCATTT +
Preference number: 5 (lower is better)
Translates to: HFCDLCELLHIGKHTRGKNAGDH*LIDFPF
Trigger: AAATGGGAAATCAATTAGCAAGTGGTCACCAGCATT...TTTACCTCGCGTGTGTTTACCTATATGGAGTAGCTCGCAGAGATCACAGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000240727.10
ENST00000433686.6
ENST00000601144.6
CDS GCA 72 bp GGACCCGGCCCCTGCCCCGCACTCCACGCGAAGGGATaGCAGACCCTCGGCCTCCTGGACGCACAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GPGPCPALHAKG*QTLGLLDAQRG
Trigger: CCCCCGCTGTGCGTCCAGGAGGCCGAGGGTCTGGCATCCCTTCGCGTGGAGTGCGGGGCAGGGGCCGGGTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000600318.1
CDS CCA 72 bp CTCTGCGATCCGGTGGCAGAGTCGGACTCCGCGTCCTaGGGGTCCTGCGGGTCCGGGGCCTTCCCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LCDPVAESDSAS*GSCGSGAFPGC
Trigger: GCAGCCTGGGAAGGCCCCGGACCCGCAGGACCCCCAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CAA 90 bp CGCACAGGGCTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTaGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAGCGCATGCC +
Preference number: 6 (lower is better)
Translates to: RTGLRALDPRGAHGC*EAALSLPGSPAAHA
Trigger: GGCATGCGCTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAGCCCTGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS GCA 72 bp GGGCCTTCCCAGGCTGCTCTTCCTCCTCCTCAGTGGTaGCCGACGGGGGATCGGCAAGGGCGTCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GPSQAALPPPQW*PTGDRQGRPQG
Trigger: CCCCTGGGGACGCCCTTGCCGATCCCCCGTCGGGCACCACTGAGGAGGAGGAAGAGCAGCCTGGGAAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 72 bp GTGCCCCTGTCCGGGGCAGGCTGCTGGATGACGGACTaGCTCTGCGATCCGGTGGCAGAGTCGGACTCCGCG +
Preference number: 6 (lower is better)
Translates to: VPLSGAGCWMTD*LCDPVAESDSA
Trigger: CGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 72 bp CGCTGCCCACTGAGGCGTCCTCACCGTCTACCCTGTTaGGGTCGCTCTCTGACCCCCGCGCTGCATCCCCGG +
Preference number: 6 (lower is better)
Translates to: RCPLRRPHRLPC*GRSLTPALHPR
Trigger: CCGGGGATGCAGCGCGGGGGTCAGAGAGCGACCCCAACAGGGTAGACGGTGAGGACGCCTCAGTGGGCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000600318.1
CDS CCA 72 bp TCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTTaGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SGLWIPAGLTAV*KQRCPSQAALQ
Trigger: CTGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 72 bp CTCCGGGCTCTGGATCCCCGCGGGGCTCACGGCTGTTaGGAAGCAGCGCTGTCCCTCCCAGGCAGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: LRALDPRGAHGC*EAALSLPGSPA
Trigger: TGCAGGGCTGCCTGGGAGGGACAGCGCTGCTTCCAAACAGCCGTGAGCCCCGCGGGGATCCAGAGCCCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp GTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTGGATaGCGGACTGCCTCTGCGATCCGGTGGCAGAGTCGG +
Preference number: 6 (lower is better)
Translates to: VSPCPCPGQAAG*RTASAIRWQSR
Trigger: CCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 72 bp CTGTCCGGGGCAGGCTGCTGGATGACGGACTGCCTCTaGGATCCGGTGGCAGAGTCGGACTCCGCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LSGAGCWMTDCL*DPVAESDSASW
Trigger: CCAGGACGCGGAGTCCGACTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 72 bp AAGGTGCCGGGATCTCCCCAGCTCCAAGGGCCTGGCTaGGGCTCGCGAGCTCGCCTGGTAGCAGCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: KVPGSPQLQGPG*GSRARLVAAEG
Trigger: ACCCTCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 72 bp CCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTGCTaGATGACGGACTGCCTCTGCGATCCGGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PSFAVPLSGAGC*MTDCLCDPVAE
Trigger: CTCTGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 72 bp CCACAGACCCTCACTAGGCCTTGGCTCCGCGACCGGTaGGCGGGAACGGAGGAAACAGACCCGAGAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PQTLTRPWLRDR*AGTEETDPRGR
Trigger: GCGGCCTCTCGGGTCTGTTTCCTCCGTTCCCGCCCACCGGTCGCGGAGCCAAGGCCTAGTGAGGGTCTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595721.1
CDS GCA 72 bp GCAGGGGTCCTCTCAGGGATGGTCTCGGGTTCTTCCTaGTGGACTCCGGCTGCTGACCCCGGCGTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: AGVLSGMVSGSS*WTPAADPGVGR
Trigger: TCTGCCCACGCCGGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS GCA 72 bp GTTCCCAGTTTCGCCGTGCCCCTGTCCGGGGCAGGCTaGTGGATGACGGACTGCCTCTGCGATCCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: VPSFAVPLSGAG*WMTDCLCDPVA
Trigger: TGCCACCGGATCGCAGAGGCAGTCCGTCATCCAGCAGCCTGCCCCGGACAGGGGCACGGCGAAACTGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS GCA 72 bp AGCCCTGACAGGCGTAGCGCTTCCGGCCGCCATGGCTaGTGTGGTGCTCCATCAGGTGCGAGAGCCACGCGA +
Preference number: 6 (lower is better)
Translates to: SPDRRSASGRHG*CGAPSGARATR
Trigger: TCGCGTGGCTCTCGCACCTGATGGAGCACCACAGCAGCCATGGCGGCCGGAAGCGCTACGCCTGTCAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 72 bp GGGGTCCTCTCAGGGATGGTCTCGGGTTCTTCCTGCTaGACTCCGGCTGCTGACCCCGGCGTGGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: GVLSGMVSGSSC*TPAADPGVGRS
Trigger: GGATCTGCCCACGCCGGGGTCAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 72 bp TCAGAAGGTGCCGGGATCTCCCCAGCTCCAAGGGCCTaGCTGGGGCTCGCGAGCTCGCCTGGTAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: SEGAGISPAPRA*LGLASSPGSSR
Trigger: TCTGCTGCTACCAGGCGAGCTCGCGAGCCCCAGCCAGGCCCTTGGAGCTGGGGAGATCCCGGCACCTTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 72 bp ACGATGCAAGGAGAGCCTGCTCAGAGCGCACCCTCCTaGAGGGAGGGGCCCGGCTGCCAGCGAAGAGAGTGG +
Preference number: 6 (lower is better)
Translates to: TMQGEPAQSAPS*REGPGCQRREW
Trigger: CCACTCTCTTCGCTGGCAGCCGGGCCCCTCCCTCCAGGAGGGTGCGCTCTGAGCAGGCTCTCCTTGCATCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp CGGAGGCCACCGACAGGACAGGAAGGACAGCCCCACTaGGCCCGGGTTCTGGAAACCGCGCCTTTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RRPPTGQEGQPH*ARVLETAPLEV
Trigger: GACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTGTCGGTGGCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS GCA 72 bp GTGGCCAGGTGCCCTCAAGGGTCAAGGAGCCCCCGCTaGCTCCCACACAGGCCCCAGTGTGCTTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: VARCPQGSRSPR*LPHRPQCASVT
Trigger: TGTCACAGAAGCACACTGGGGCCTGTGTGGGAGGCAGCGGGGGCTCCTTGACCCTTGAGGGCACCTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596372.1
ENST00000598497.1
CDS CCA 72 bp CCAGGGTGGGTTCTGGGCCTCAGCGCTGTGGACGTTTaGGGCCACAGCCCTCTGCTGAGCACTGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: PGWVLGLSAVDV*GHSPLLSTGDG
Trigger: CCCATCACCAGTGCTCAGCAGAGGGCTGTGGCCCCAAACGTCCACAGCGCTGAGGCCCAGAACCCACCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594191.5
ENST00000598497.1
CDS CCA 72 bp AAGATTCCGCCCTCACGCTCCCACCAGGGTGGGTTCTaGGCCTCAGCGCTGTGGACGTTTGGGGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: KIPPSRSHQGGF*ASALWTFGATA
Trigger: GGCTGTGGCCCCAAACGTCCACAGCGCTGAGGCCCAGAACCCACCCTGGTGGGAGCGTGAGGGCGGAATCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594191.5
ENST00000598497.1
CDS CCA 72 bp GGCCCCTGGACAGTGGAGCAAAGAAGAAGGCGAGGCTaGAAGGGCAACGGGGCAGGCGGAGGCAGGACTCAG +
Preference number: 6 (lower is better)
Translates to: GPWTVEQRRRRG*KGNGAGGGRTQ
Trigger: CTGAGTCCTGCCTCCGCCTGCCCCGTTGCCCTTCCAGCCTCGCCTTCTTCTTTGCTCCACTGTCCAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp GGGAACACCCTGGCCCCTTTCCCTAACGCTGCCCACTaGGGCGTCCTCACCGTCTACCCTGTTGGGGTCGCT +
Preference number: 6 (lower is better)
Translates to: GNTLAPFPNAAH*GVLTVYPVGVA
Trigger: AGCGACCCCAACAGGGTAGACGGTGAGGACGCCTCAGTGGGCAGCGTTAGGGAAAGGGGCCAGGGTGTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000240727.10
ENST00000600318.1
CDS CCA 72 bp CACCACAAAGATTCCGCCCTCACGCTCCCACCAGGGTaGGTTCTGGGCCTCAGCGCTGTGGACGTTTGGGGC +
Preference number: 6 (lower is better)
Translates to: HHKDSALTLPPG*VLGLSAVDVWG
Trigger: GCCCCAAACGTCCACAGCGCTGAGGCCCAGAACCCACCCTGGTGGGAGCGTGAGGGCGGAATCTTTGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594191.5
ENST00000598497.1
CDS CCA 72 bp CAGGACAGGAAGGACAGCCCCACTGAGCCCGGGTTCTaGAAACCGCGCCTTTGGAGGTCTCCACCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: QDRKDSPTEPGF*KPRLWRSPPGH
Trigger: GTGGCCAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAACCCGGGCTCAGTGGGGCTGTCCTTCCTGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp CCCGCTGCCTCCCACACAGGCCCCAGTGTGCTTCTGTaGCAGCAGCACCCAAGGCTCAACGGACACTACACC +
Preference number: 6 (lower is better)
Translates to: PAASHTGPSVLL*QQHPRLNGHYT
Trigger: GGTGTAGTGTCCGTTGAGCCTTGGGTGCTGCTGTCACAGAAGCACACTGGGGCCTGTGTGGGAGGCAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596372.1
ENST00000598497.1
CDS GCA 72 bp AGCCAGCCCTGGCCAGGGACTCTAACCCAGGTGCACTaGAGGAGGCAGCCCCCTTCGCACCACAAAGATTCC +
Preference number: 6 (lower is better)
Translates to: SQPWPGTLTQVH*RRQPPSHHKDS
Trigger: GGAATCTTTGTGGTGCGAAGGGGGCTGCCTCCTGCAGTGCACCTGGGTTAGAGTCCCTGGCCAGGGCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594191.5
ENST00000598497.1
CDS CCA 72 bp GGGAGAACTCCAGGTCAGCAGGGGTCCTCTCAGGGATaGTCTCGGGTTCTTCCTGCTGGACTCCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRTPGQQGSSQG*SRVLPAGLRLL
Trigger: CAGCAGCCGGAGTCCAGCAGGAAGAACCCGAGACCATCCCTGAGAGGACCCCTGCTGACCTGGAGTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS CCA 72 bp GAACCCACAGACCTGCAGAGGACACGGACAAGGCAATaGCCTTGCATAAGGCCAGGGCGCAGCCACCCCAGC +
Preference number: 6 (lower is better)
Translates to: EPTDLQRTRTRQ*PCIRPGRSHPS
Trigger: GCTGGGGTGGCTGCGCCCTGGCCTTATGCAAGGCCATTGCCTTGTCCGTGTCCTCTGCAGGTCTGTGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 72 bp CACAGACCTGCAGAGGACACGGACAAGGCAATGGCCTaGCATAAGGCCAGGGCGCAGCCACCCCAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: HRPAEDTDKAMA*HKARAQPPQLP
Trigger: TGGCAGCTGGGGTGGCTGCGCCCTGGCCTTATGCAAGGCCATTGCCTTGTCCGTGTCCTCTGCAGGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 90 bp GCCAGAACCCACAGACCTGCAGAGGACACGGACAAGGCAATGGCCTaGCATAAGGCCAGGGCGCAGCCACCCCAGCTGCCAGAGAACAAA +
Preference number: 6 (lower is better)
Translates to: ARTHRPAEDTDKAMA*HKARAQPPQLPENK
Trigger: TTTGTTCTCTGGCAGCTGGGGTGGCTGCGCCCTGGCCTTATGCAAGGCCATTGCCTTGTCCGTGTCCTCTGCAGGTCTGTGGGTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp AGGGACAAGGTGGCTCCAAAGGAGAGGTGCCAGGGATaGCCAGATGCCCAGTGGGCTCAGGTGGTGCCAGAA +
Preference number: 6 (lower is better)
Translates to: RDKVAPKERCQG*PDAQWAQVVPE
Trigger: TTCTGGCACCACCTGAGCCCACTGGGCATCTGGTCATCCCTGGCACCTCTCCTTTGGAGCCACCTTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000595721.1
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601063.1
ENST00000601144.6
CDS TCA 72 bp AGGGGCAGAGAGCCCACCTCTAGGATGGGGATGGGCTaGGCACGCGATGCTGGGCAACTAAAGAACCAGACC +
Preference number: 6 (lower is better)
Translates to: RGREPTSRMGMG*ARDAGQLKNQT
Trigger: GGTCTGGTTCTTTAGTTGCCCAGCATCGCGTGCTCAGCCCATCCCCATCCTAGAGGTGGGCTCTCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 72 bp GCCCTCCAGCCCAAGTCCGCCTCTAGGTGTTCTTGTTaGTGTGCTGGCACAGAGCCTCCAATGGGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: ALQPKSASRCSC*CAGTEPPMGQN
Trigger: GTTCTGCCCCATTGGAGGCTCTGTGCCAGCACACCAACAAGAACACCTAGAGGCGGACTTGGGCTGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 72 bp CCTGTATCTGGCAAGGAGGGTGGCAATGTGGGCGCCTaGGGGCCAGGAGGCCTTTCCAAATTCCGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: PVSGKEGGNVGA*GPGGLSKFRGF
Trigger: GAAGCCTCGGAATTTGGAAAGGCCTCCTGGCCCCAAGGCGCCCACATTGCCACCCTCCTTGCCAGATACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CAA 90 bp GGTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTGGCCACTAGCTaGGCCACAAGATGCACGATGCAAGGAGAGCCTGCTCAGAGCGCA +
Preference number: 6 (lower is better)
Translates to: GSGNRAFGGLHLATS*ATRCTMQGEPAQSA
Trigger: TGCGCTCTGAGCAGGCTCTCCTTGCATCGTGCATCTTGTGGCCAAGCTAGTGGCCAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp TGTTGGCAGGGCCGTCCTCTTCGGTCTTTGCTTCTCTaGCCCTCCTCTGTTCCAGAAACAGGGGGTCCGGAG +
Preference number: 6 (lower is better)
Translates to: CWQGRPLRSLLL*PSSVPETGGPE
Trigger: CTCCGGACCCCCTGTTTCTGGAACAGAGGAGGGTCAGAGAAGCAAAGACCGAAGAGGACGGCCCTGCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000595784.1
ENST00000596372.1
ENST00000598497.1
ENST00000600404.1
ENST00000601144.6
CDS CCA 72 bp TGCTGGGCAACTAAAGAACCAGACCCAACCACAGCCTaGGGGACCCACCCCTCGAACAGCAAGCACTCAGAC +
Preference number: 6 (lower is better)
Translates to: CWATKEPDPTTA*GTHPSNSKHSD
Trigger: GTCTGAGTGCTTGCTGTTCGAGGGGTGGGTCCCCCAGGCTGTGGTTGGGTCTGGTTCTTTAGTTGCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 72 bp CTGTATCTGGCAAGGAGGGTGGCAATGTGGGCGCCTTaGGGCCAGGAGGCCTTTCCAAATTCCGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LYLARRVAMWAP*GQEAFPNSEAS
Trigger: TGAAGCCTCGGAATTTGGAAAGGCCTCCTGGCCCCAAGGCGCCCACATTGCCACCCTCCTTGCCAGATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CCA 72 bp GAACGGCCACCCCCGGGACCAGTCATACACAGATCCTaGCAACTAACACCACTGCCGTTTCCACCGACCAAG +
Preference number: 6 (lower is better)
Translates to: ERPPPGPVIHRS*QLTPLPFPPTK
Trigger: CTTGGTCGGTGGAAACGGCAGTGGTGTTAGTTGCCAGGATCTGTGTATGACTGGTCCCGGGGGTGGCCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 72 bp CGGGTTCTGGAAACCGCGCCTTTGGAGGTCTCCACCTaGCCACTAGCTTGGCCACAAGATGCACGATGCAAG +
Preference number: 6 (lower is better)
Translates to: RVLETAPLEVST*PLAWPQDARCK
Trigger: CTTGCATCGTGCATCTTGTGGCCAAGCTAGTGGCCAGGTGGAGACCTCCAAAGGCGCGGTTTCCAGAACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 72 bp TCCTGTAAGACATCACAGTGTCCCAGCCAAAGTCCCTaGGGTCACAGTCTCCTGCACCAACCCCTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: SCKTSQCPSQSP*GHSLLHQPLRK
Trigger: CTTCCGCAGGGGTTGGTGCAGGAGACTGTGACCCCAGGGACTTTGGCTGGGACACTGTGATGTCTTACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS GCA 72 bp CTCGCGAGCTCGCCTGGTAGCAGCAGAGGGTCCATGTaGCTCTCGTACACTCCATCGCTAAGAATTGAGGAT +
Preference number: 6 (lower is better)
Translates to: LASSPGSSRGSM*LSYTPSLRIED
Trigger: ATCCTCAATTCTTAGCGATGGAGTGTACGAGAGGCACATGGACCCTCTGCTGCTACCAGGCGAGCTCGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000421612.6
ENST00000433686.6
ENST00000594191.5
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601144.6
CDS GCA 72 bp CAGAGCTGGCTCAGTGTGTGTGGACTGTGCAAACAGTaGAGTTCTGCTGAGGGGTATGCTGGCTGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: QSWLSVCGLCKQ*SSAEGYAGCAS
Trigger: TGAGGCACAGCCAGCATACCCCTCAGCAGAACTGCACTGTTTGCACAGTCCACACACACTGAGCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS CCA 72 bp TCAGAGAAACTACAGGAGGAAGTCCCAATGATAGCATaGACCATGGAGCCCCTGACTCCCTGGCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: SEKLQEEVPMIA*TMEPLTPWLPF
Trigger: GAAGGGCAGCCAGGGAGTCAGGGGCTCCATGGTCCATGCTATCATTGGGACTTCCTCCTGTAGTTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 72 bp GCAACACCACATAGTGCTGGGCTGTATCCAGGCCAGTaGGCACCTTCCGTGCTGGTAATGAACAGCCACAAA +
Preference number: 6 (lower is better)
Translates to: ATPHSAGLYPGQ*APSVLVMNSHK
Trigger: TTTGTGGCTGTTCATTACCAGCACGGAAGGTGCCCACTGGCCTGGATACAGCCCAGCACTATGTGGTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 72 bp CACCCGGCCCTAACACCAATTCAACCCAACCTCACCTaGGAGGCTGCTTCCTTGTGGATCTCTTTCCACCAA +
Preference number: 6 (lower is better)
Translates to: HPALTPIQPNLT*EAASLWISFHQ
Trigger: TTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAATTGGTGTTAGGGCCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 72 bp CAACTAACACCACTGCCGTTTCCACCGACCAAGTCTTaGGGTGGTCTGTCATGCAGCAAGAGACCATGGACG +
Preference number: 6 (lower is better)
Translates to: QLTPLPFPPTKS*GGLSCSKRPWT
Trigger: CGTCCATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTTGGTCGGTGGAAACGGCAGTGGTGTTAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 72 bp GCAACTAACACCACTGCCGTTTCCACCGACCAAGTCTaGGGGTGGTCTGTCATGCAGCAAGAGACCATGGAC +
Preference number: 6 (lower is better)
Translates to: ATNTTAVSTDQV*GWSVMQQETMD
Trigger: GTCCATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTTGGTCGGTGGAAACGGCAGTGGTGTTAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS TCA 72 bp TCCTTCCCAACACCATCCCAAGTTGATGCTTCCATTTaGCTTTTGTTTCCCAGGCCGAGAGGCCGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: SFPTPSQVDASI*LLFPRPRGRER
Trigger: CCTCTCGCGGCCTCTCGGCCTGGGAAACAAAAGTCAAATGGAAGCATCAACTTGGGATGGTGTTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594567.1
CDS CCA 72 bp ATTCAACCCAACCTCACCTGGGAGGCTGCTTCCTTGTaGATCTCTTTCCACCAACCGGAGTTCCTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: IQPNLTWEAASL*ISFHQPEFLSV
Trigger: GACACTGAGGAACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 72 bp AACACCACTGCCGTTTCCACCGACCAAGTCTTGGGGTaGTCTGTCATGCAGCAAGAGACCATGGACGTAACT +
Preference number: 6 (lower is better)
Translates to: NTTAVSTDQVLG*SVMQQETMDVT
Trigger: AGTTACGTCCATGGTCTCTTGCTGCATGACAGACCACCCCAAGACTTGGTCGGTGGAAACGGCAGTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CAA 72 bp CTGCTGAGGGGTATGCTGGCTGTGCCTCATTTGTTTTaGGCAGTTGTGGACCCTCATGTCCATCTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: LLRGMLAVPHLF*AVVDPHVHLCG
Trigger: CCCACAGAGATGGACATGAGGGTCCACAACTGCCAAAAACAAATGAGGCACAGCCAGCATACCCCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS GCA 72 bp CCTAACACCAATTCAACCCAACCTCACCTGGGAGGCTaGTTCCTTGTGGATCTCTTTCCACCAACCGGAGTT +
Preference number: 6 (lower is better)
Translates to: PNTNSTQPHLGG*FLVDLFPPTGV
Trigger: AACTCCGGTTGGTGGAAAGAGATCCACAAGGAAGCAGCCTCCCAGGTGAGGTTGGGTTGAATTGGTGTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1
CDS CCA 72 bp TCCAAATTCCGAGGCTTCAGTCCTACAGGCAGGGCCTaGGCAGAACTCAGATGTTTAGATCAGAAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: SKFRGFSPTGRA*AELRCLDQKGW
Trigger: CCACCCTTTCTGATCTAAACATCTGAGTTCTGCCCAGGCCCTGCCTGTAGGACTGAAGCCTCGGAATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CAA 72 bp GCAGTTCTGCTGAGGGGTATGCTGGCTGTGCCTCATTaGTTTTTGGCAGTTGTGGACCCTCATGTCCATCTC +
Preference number: 6 (lower is better)
Translates to: AVLLRGMLAVPH*FLAVVDPHVHL
Trigger: GAGATGGACATGAGGGTCCACAACTGCCAAAAACAAATGAGGCACAGCCAGCATACCCCTCAGCAGAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600897.5
ENST00000601063.1
CDS GCA 72 bp TCTATTTTATGTGAAATGTCGAACTCACACACCACTTaGCCAGTGGTCCTGAGGAGTCCACCCACAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SILCEMSNSHTT*PVVLRSPPTVP
Trigger: GGGCACTGTGGGTGGACTCCTCAGGACCACTGGGCAAGTGGTGTGTGAGTTCGACATTTCACATAAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598497.1
ENST00000600318.1
CDS CCA 72 bp GCCTGGGCAGAACTCAGATGTTTAGATCAGAAAGGGTaGGGGCTTCAGCGAATAAATTCAAGCTCCAACACG +
Preference number: 6 (lower is better)
Translates to: AWAELRCLDQKG*GLQRINSSSNT
Trigger: CGTGTTGGAGCTTGAATTTATTCGCTGAAGCCCCCACCCTTTCTGATCTAAACATCTGAGTTCTGCCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS TCA 72 bp AAAGGCAACATCTTTCCAAAACGGCACTGGAAAATGTaGCTGTCTAGCCAGGGACAAGGTGGCTCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: KGNIFPKRHWKM*LSSQGQGGSKG
Trigger: TCCTTTGGAGCCACCTTGTCCCTGGCTAGACAGTCACATTTTCCAGTGCCGTTTTGGAAAGATGTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000240727.10
ENST00000594191.5
ENST00000595721.1
ENST00000598497.1
ENST00000600318.1
ENST00000600404.1
ENST00000600845.1
ENST00000600897.5
ENST00000601063.1
ENST00000601144.6
CDS GCA 72 bp TGGGGGCTTCAGCGAATAAATTCAAGCTCCAACACGTaGAAGTTCAAATCCTGTAAGACATCACAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: WGLQRINSSSNT*KFKSCKTSQCP
Trigger: GGGACACTGTGATGTCTTACAGGATTTGAACTTGCACGTGTTGGAGCTTGAATTTATTCGCTGAAGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595784.1
ENST00000598497.1
CDS CAA 72 bp ACACCCAGAGTTCACACAGATTTCCAAGAAACCCGCTaGTTAGGCATCAGTAGAACCTCAGTGTTGTACTCA +
Preference number: 6 (lower is better)
Translates to: TPRVHTDFQETR*LGISRTSVLYS
Trigger: TGAGTACAACACTGAGGTTCTACTGATGCCTAACAAGCGGGTTTCTTGGAAATCTGTGTGAACTCTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598497.1