Pregenerated sensors for ZSCAN16 (Homo sapiens)
Ensembl gene IDs: ENSG00000196812Ensembl transcript IDs: ENST00000340487.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGCTCCAGTACCGTCACTaGCTCCTCTCCAGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKLQYRH*LLSSLW Trigger: CCAGAGACTGGAGAGGAGGCAGTGACGGTACTGGAG...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCCAGAGCTCCCACAGCTaGGTAAGAGCTTCACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLQSSHS*VRASRG Trigger: ACCCCGTGAAGCTCTTACCCAGCTGTGGGAGCTCTG...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGCTCCTCTCCAGTCTCTaGATGGTGTGCACGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKLLSSL*MVCTHP Trigger: TGGGTGCGTGCACACCATCCAGAGACTGGAGAGGAG...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGTCTCCAGTCTCTGGATaGTGTGCACGCACCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKSPVSG*CARTHA Trigger: AGCATGGGTGCGTGCACACCATCCAGAGACTGGAGA...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGCTTCCTGCTCCAGCTaGGTCTTTTTGGGATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKASCSS*VFLGWS Trigger: GCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCTTCACGGGGTCCAGGTaGATCCTGATAGCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLFTGSR*ILIAEL Trigger: AAGCTCTGCTATCAGGATGCACCTGGACCCCGTGAA...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTGTGCACGCACCCATaGTTGCAGGTCTTTAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKVCTHP*LQVFRK Trigger: CTTCCTAAAGACCTGCAAGCATGGGTGCGTGCACAC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCACAGCTAGCGTCCTTTaGACAGCCCCGAACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLTASVL*TAPNKD Trigger: GTCTTTGTTCGGGGCTGTCCAAAGGACGCTAGCTGT...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGCCAGCTGGGTCTTTTTaGGATGGAGCTGGACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKPAGSF*DGAGQS Trigger: TGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGG...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCTATGTCCCGTCTTTCTaGATTGCCTGGGACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLYVPSF*IAWDLL Trigger: AAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATA...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGCCCTCCTGTGAGGACTaGACTTTTGTGAGCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKPSCED*TFVSWN Trigger: ATTCCAGCTCACAAAAGTGCAGTCCTCACAGGAGGG...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGCACGCACCCATGCTTaGAGGTCTTTAGGAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKARTHA*RSLGRM Trigger: CATTCTTCCTAAAGACCTGCAAGCATGGGTGCGTGC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGAATTGCCTGGGACCTaGTTTCCAGGTTCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKELPGT*FPGSSS Trigger: GCTTGATGAACCTGGAAAGCAGGTCCCAGGCAATTC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGGGCTGTGGTCATTCTaGGCTTTGCCAGGAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKGLWSF*ALPGDL Trigger: TAAATCTCCTGGCAAAGCCCAGAATGACCACAGCCC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGAGTCTCTGGATGGTGTaGACGCACCCATGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLSLWMV*THPCLQ Trigger: CTGCAAGCATGGGTGCGTGCACACCATCCAGAGACT...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCATCAGAAGTCCTTTTTaGTCCTCAGGTTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLIRSPF*SSGSRA Trigger: AGCCCTGGAACCTGAGGACCAAAAAGGACTTCTGAT...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCATCACCATTCCTTTGTaGTTTCCCAGCTTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLITIPL*FPSFLL Trigger: GAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGAT...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGAGGACTGCACTTTTGTaGGCTGGAATCCTGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLRTALL*AGILSP Trigger: TGGGGACAGGATTCCAGCTCACAAAAGTGCAGTCCT...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCATGTCCAATGAGATGTaGGCGCTGAATGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLMSNEM*ALNEGF Trigger: AAAGCCTTCATTCAGCGCTCACATCTCATTGGACAT...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGGACCTGTGCGCCCACTaGAGTCTTTCCCACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLDLCAH*SLSHIL Trigger: AAGAATGTGGGAAAGACTTCAGTGGGCGCACAGGTC...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCGGTCATTCTGGGCTTTaGCAGGAGATTTATCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLGHSGL*QEIYPL Trigger: TAGAGGATAAATCTCCTGGCAAAGCCCAGAATGACC...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGTGCACTTTTGTGAGCTaGAATCCTGTCCCCAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKCTFVS*NPVPSN Trigger: ATTACTGGGGACAGGATTCCAGCTCACAAAAGTGCA...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGATAGCAGAGCTTCCTaGAGTGTTGTCTATAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKDSRAS*SVVYRV Trigger: AACTCTATAGACAACACTTCAGGAAGCTCTGCTATC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGGAGCTGGACAGTCAGTaGTTCATATGGCCTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLELDSQ*FIWPSQ Trigger: TTGGGAAGGCCATATGAATCACTGACTGTCCAGCTC...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGTTGGACTTAGGATGCTaGGGAGTATCTTTGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKLDLGC*GVSLFS Trigger: ACTGAACAAAGATACTCCTCAGCATCCTAAGTCCAA...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCTTTTTGGGATGGAGCTaGACAGTCAGTGATTCATAT | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLFLGWS*TVSDSY Trigger: ATATGAATCACTGACTGTCCAGCTCCATCCCAAAAA...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGTGGGTCTTTTTGGGATaGAGCTGGACAGTCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLWVFLG*SWTVSD Trigger: ATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCA...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGCCTCTGTTGCCATTCTaGTCTGCCCTCATTTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLPLLPF*SALIFN Trigger: ATTGAAAATGAGGGCAGATCAGAATGGCAACAGAGG...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR TCA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGAAGTTTAATGATGACTaGAGCTTTGACCACATTGAG | + |
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Preference number: 4 (lower is better) Translates to: VQRSLMMTEALTTLRKLKKFNDD*SFDHIE Trigger: CTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTT...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCGGCATATCTTCCTTCTaGAACAACTCTTCATTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LVQRSLMMTEALTTLRKLGISSF*NNSSFL Trigger: TAAGAATGAAGAGTTGTTCCAGAAGGAAGATATGCC...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGCCAGTAATGGTCCTCTaGCTTAATTATCAGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLPVMVL*LNYQKS Trigger: GGACTTCTGATAATTAAGGCAGAGGACCATTACTGG...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CCA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGGGAATTCCTTGTCTTTaGGCATATCTTCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TEALTTLRKLKVSKIDSLGIPCL*AYLPSG Trigger: TCCAGAAGGAAGATATGCCCAAAGACAAGGAATTCC...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| 3UTR CAA 72 bp | TCTTTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTaGACCACATTGAGGAAACTCAAGGTTTCTAAAATA | + |
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Preference number: 4 (lower is better) Translates to: SLVQRSLMMTEA*TTLRKLKVSKI Trigger: TATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 90 bp | CAGTCAGTGATTCATATGGCCTTCCCAAGGGGGCCAACTTGTCCATaGGTATGTCCCGTCTTTCTGAATTGCCTGGGACCTGCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QSVIHMAFPRGPTCP*VCPVFLNCLGPAFQ Trigger: CTGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 90 bp | TTCCTGCTCCAGCTGGGTCTTTTTGGGATGGAGCTGGACAGTCAGTaGTTCATATGGCCTTCCCAAGGGGGCCAACTTGTCCATGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: FLLQLGLFGMELDSQ*FIWPSQGGQLVHEY Trigger: ATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CCA 90 bp | TCAGAAGTCCTTTTTGGTCCTCAGGTTCCAGGGCTGTGGTCATTCTaGGCTTTGCCAGGAGATTTATCCTCTATCTTACGCGCAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SEVLFGPQVPGLWSF*ALPGDLSSILRAGR Trigger: CCTCCCTGCGCGTAAGATAGAGGATAAATCTCCTGGCAAAGCCCAGAATGACCACAGCCCTGGAACCTGAGGACCAAAAAGGACTTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CCA 90 bp | GTTTTATCACCATTCCTTTGTGGTTTCCCAGCTTCCTGCTCCAGCTaGGTCTTTTTGGGATGGAGCTGGACAGTCAGTGATTCATATGGC | + |
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Preference number: 5 (lower is better) Translates to: VLSPFLCGFPASCSS*VFLGWSWTVSDSYG Trigger: GCCATATGAATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS GCA 90 bp | TTAGTCCTAGTTTTATCACCATTCCTTTGTGGTTTCCCAGCTTCCTaGTCCAGCTGGGTCTTTTTGGGATGGAGCTGGACAGTCAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LVLVLSPFLCGFPAS*SSWVFLGWSWTVSD Trigger: ATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAAACTAGGACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCCCCAAGGGGGCCAACTaGTCCATGAGTATGTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: LVQRSLMMTEALTTLRKLPKGAN*SMSMSR Trigger: ACGGGACATACTCATGGACAAGTTGGCCCCCTTGGG...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCTGCACGCACCCATGCTaGCAGGTCTTTAGGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LVQRSLMMTEALTTLRKLCTHPC*QVFRKN Trigger: ATTCTTCCTAAAGACCTGCAAGCATGGGTGCGTGCA...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | TTGGTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCTGGTCATTCTGGGCTTaGCCAGGAGATTTATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVQRSLMMTEALTTLRKLWSFWA*PGDLSS Trigger: AGAGGATAAATCTCCTGGCAAAGCCCAGAATGACCA...GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGGAGCTTCCTGAAGTGTaGTCTATAGAGTTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VQRSLMMTEALTTLRKLKELPEV*SIEFPP Trigger: AGGAGGGAACTCTATAGACAACACTTCAGGAAGCTC...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGTCCCGTCTTTCTGAATaGCCTGGGACCTGCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TEALTTLRKLKVSKIDSLSRLSE*PGTCFP Trigger: TGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGA...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGTTTATCACCATTCCTTaGTGGTTTCCCAGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VQRSLMMTEALTTLRKLKFITIP*WFPSFL Trigger: CAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAA...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGAGGAATTCCTTGTCTTaGGGCATATCTTCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VQRSLMMTEALTTLRKLKRNSLS*GISSFW Trigger: CCAGAAGGAAGATATGCCCAAAGACAAGGAATTCCT...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGTATCAGAAGTCCTTTTaGGTCCTCAGGTTCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: TEALTTLRKLKVSKIDSLYQKSF*VLRFQG Trigger: GCCCTGGAACCTGAGGACCAAAAAGGACTTCTGATA...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGTCTAAAATCTGCTCCTaGGTGTGGCATTCTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: TEALTTLRKLKVSKIDSLSKICS*VWHSGL Trigger: GAGGCCAGAATGCCACACCAAGGAGCAGATTTTAGA...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGAAGTTTAATGATGACTGAAGCTTTGACCACATTGAGGAAACTCAAGATGATGACTGAAGCTTaGACCACATTGAGGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: VQRSLMMTEALTTLRKLKMMTEA*TTLRKL Trigger: GAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCAT...CTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGTCATCATTAAACTTCTCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 90 bp | TCTGATCTGCCCTCATTTTCAATAATATCTTTGGACTTAGGATGCTaGGGAGTATCTTTGTTCAGTCTGTCATTTATCTCCCCAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SDLPSFSIISLDLGC*GVSLFSLSFISPRN Trigger: ATTCCTTGGGGAGATAAATGACAGACTGAACAAAGATACTCCTCAGCATCCTAAGTCCAAAGATATTATTGAAAATGAGGGCAGATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCTTTGACCACATTGAGGAAACTCAAGGTTTCTAAAATAGATTCTTTGGAAGCTTTGACCACATaGAGGAAACTCAAGGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TEALTTLRKLKVSKIDSLEALTT*RKLKVS Trigger: AGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTC...CAAAGAATCTATTTTAGAAACCTTGAGTTTCCTCAATGTGGTCAAAGCTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 72 bp | CAGCTGGGTCTTTTTGGGATGGAGCTGGACAGTCAGTaGTTCATATGGCCTTCCCAAGGGGGCCAACTTGTC | + |
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Preference number: 6 (lower is better) Translates to: QLGLFGMELDSQ*FIWPSQGGQLV Trigger: GACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 90 bp | AGCTGGACAGTCAGTGATTCATATGGCCTTCCCAAGGGGGCCAACTaGTCCATGAGTATGTCCCGTCTTTCTGAATTGCCTGGGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SWTVSDSYGLPKGAN*SMSMSRLSELPGTC Trigger: GCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGACTGTCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 72 bp | GGGGGCCAACTTGTCCATGAGTATGTCCCGTCTTTCTaGATTGCCTGGGACCTGCTTTCCAGGTTCATCAAG | + |
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Preference number: 6 (lower is better) Translates to: GGQLVHEYVPSF*IAWDLLSRFIK Trigger: CTTGATGAACCTGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CCA 72 bp | CCATTCCTTTGTGGTTTCCCAGCTTCCTGCTCCAGCTaGGTCTTTTTGGGATGGAGCTGGACAGTCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: PFLCGFPASCSS*VFLGWSWTVSD Trigger: ATCACTGACTGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 72 bp | TCTATAGAGTTCCCTCCTGTGAGGACTGCACTTTTGTaGGCTGGAATCCTGTCCCCAGTAATGGTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SIEFPPVRTALL*AGILSPVMVLC Trigger: GCAGAGGACCATTACTGGGGACAGGATTCCAGCTCACAAAAGTGCAGTCCTCACAGGAGGGAACTCTATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS TCA 72 bp | ATTCATATGGCCTTCCCAAGGGGGCCAACTTGTCCATaGGTATGTCCCGTCTTTCTGAATTGCCTGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: IHMAFPRGPTCP*VCPVFLNCLGP Trigger: AGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS GCA 72 bp | GTTTTATCACCATTCCTTTGTGGTTTCCCAGCTTCCTaGTCCAGCTGGGTCTTTTTGGGATGGAGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: VLSPFLCGFPAS*SSWVFLGWSWT Trigger: TGTCCAGCTCCATCCCAAAAAGACCCAGCTGGAGCAGGAAGCTGGGAAACCACAAAGGAATGGTGATAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 72 bp | GCCAACTTGTCCATGAGTATGTCCCGTCTTTCTGAATaGCCTGGGACCTGCTTTCCAGGTTCATCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ANLSMSMSRLSE*PGTCFPGSSSS Trigger: AGAGCTTGATGAACCTGGAAAGCAGGTCCCAGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 72 bp | GTCAGTGATTCATATGGCCTTCCCAAGGGGGCCAACTaGTCCATGAGTATGTCCCGTCTTTCTGAATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VSDSYGLPKGAN*SMSMSRLSELP Trigger: AGGCAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAGGCCATATGAATCACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 72 bp | GTAATGGTCCTCTGCCTTAATTATCAGAAGTCCTTTTaGGTCCTCAGGTTCCAGGGCTGTGGTCATTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VMVLCLNYQKSF*VLRFQGCGHSG Trigger: CCCAGAATGACCACAGCCCTGGAACCTGAGGACCAAAAAGGACTTCTGATAATTAAGGCAGAGGACCATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 72 bp | TTGTTCAGTCTGTCATTTATCTCCCCAAGGAATTCCTaGTCTTTGGGCATATCTTCCTTCTGGAACAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LFSLSFISPRNS*SLGISSFWNNS Trigger: AGAGTTGTTCCAGAAGGAAGATATGCCCAAAGACAAGGAATTCCTTGGGGAGATAAATGACAGACTGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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| CDS CAA 90 bp | GGAGTATCTTTGTTCAGTCTGTCATTTATCTCCCCAAGGAATTCCTaGTCTTTGGGCATATCTTCCTTCTGGAACAACTCTTCATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: GVSLFSLSFISPRNS*SLGISSFWNNSSFL Trigger: TAAGAATGAAGAGTTGTTCCAGAAGGAAGATATGCCCAAAGACAAGGAATTCCTTGGGGAGATAAATGACAGACTGAACAAAGATACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340487.5 |
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