RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZSCAN10 (Homo sapiens)

Ensembl gene IDs: ENSG00000130182

Ensembl transcript IDs: ENST00000252463.6, ENST00000538082.5, ENST00000571903.5, ENST00000572431.1, ENST00000572548.1, ENST00000575108.5, ENST00000576483.1, ENST00000576985.6, ENST00000577059.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTaGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGC +
Preference number: 1 (lower is better)
Translates to: EVGCGGKGHSCRPPL*RTPGRWRRARLAEG
Trigger: GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
3UTR GCA 90 bp TTTTACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATaGCTCGGCCAGGGAAGGACAGCTGTGAAAGTGGAAGGAGAGGGA +
Preference number: 1 (lower is better)
Translates to: FYFGRFNYIAEARKQ*LGQGRTAVKVEGEG
Trigger: TCCCTCTCCTTCCACTTTCACAGCTGTCCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
3UTR-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGGGGAAGGGACATTCCTaGAGGCCTCCGCTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRGKGHS*RPPLWR
Trigger: CCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
3UTR-3UTR CCA 90 bp GCCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 2 (lower is better)
Translates to: AWDSAKMGVGQAAPLGSSKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...AGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572548.1
3UTR-3UTR GCA 90 bp GATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTTGTTTAAATTCCTCCTTGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 2 (lower is better)
Translates to: DGSGPGSPFGLFLFKFLLESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...AAGGAGGAATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
3UTR CCA 72 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTaGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTG +
Preference number: 3 (lower is better)
Translates to: CGGKGHSCRPPL*RTPGRWRRARL
Trigger: CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
3UTR CCA 72 bp CCCTTTGGGCTCTTCTTGTTTAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PFGLFLFKFLLV*GSASESQGVCR
Trigger: CCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572548.1
3UTR GCA 72 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATaGCTCGGCCAGGGAAGGACAGCTGTGAAAGTGGAA +
Preference number: 3 (lower is better)
Translates to: GRFNYIAEARKQ*LGQGRTAVKVE
Trigger: TTCCACTTTCACAGCTGTCCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGCGGTGGGCCACCAGGTaGTCGCTGCGCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRRWATR*SLRRKA
Trigger: GGCCTTCCGGCGCAGCGAGCACCTGGTGGCCCACCG...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAGCGTCTCGCGGGCGTaGGTGCGCAGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRSVSRA*VRRWRS
Trigger: GCTGCGCCACCTGCGCACCCACGCCCGCGAGACGCT...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGCCGCGGCCGCACTCTaGGCACAGGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRAAAAL*AQEGGF
Trigger: GAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGC...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGSPGGG*RSLRRT
Trigger: GGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGCCCCGTCCGAGCGACTaGGCGCAAGGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAPRPSD*AQGSPG
Trigger: GCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGG...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPWVSR*RARLAR
Trigger: CCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGCCGAGGGCCACCGTaGGTCAGCAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGGRGPP*VSRWRA
Trigger: TGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCGCACTGGGTGCAGTaGTGGGGCCGAGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPHWVQ*WGRGPP
Trigger: CGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCCGCACTGGGTGCAGTaGTGGGGCCGAGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAPHWVQ*WGRGPP
Trigger: CGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGCCGCACTGGGTGCAGTaGTGGGGCCGAGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAPHWVQ*WGRGPP
Trigger: CGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGG...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGTGCCCGGGCTCCGCATaGGTAGCCAGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKACPGSA*VARCRR
Trigger: GCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCA...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTGCCCGGGCTCCGCATaGGTAGCCAGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGCPGSA*VARCRR
Trigger: GCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGAGCGTCTCGCGGGCGTaGGTGCGCAGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLASVSRA*VRRWRS
Trigger: GCTGCGCCACCTGCGCACCCACGCCCGCGAGACGCT...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTGCGCCAGCAGGTGCTaGACAAGGCTGGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGCASRC*TRLARR
Trigger: GCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGTCTTCCCGCACTGGGTaGAGTGGTGGGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRSSRTG*SGGAEG
Trigger: GCCCTCGGCCCCACCACTGCACCCAGTGCGGGAAGA...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGCCTGGCGCCCGTGTaGACCAGCAGGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGGLAPV*TSRCRS
Trigger: GCTGCGACACCTGCTGGTGCACACGGGCGCCAGGCC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCTCTGGCGGAAGCGGTaGCCGCACAGGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGLWRKR*PHRWQA
Trigger: CGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGTGCTGCACAAGGCTaGCGCGGCGCTGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAGAAQG*RGAGSR
Trigger: GCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACC...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGCGTGGATCCGCAGGTaGCGCTTGAGGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRAWIRR*RLRLER
Trigger: CCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGC...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLPWVSR*RARLAR
Trigger: CCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCACTGGGTGCAGTGGTaGGGCCGAGGGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAHWVQW*GRGPPW
Trigger: CCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCACTGGGTGCAGTGGTaGGGCCGAGGGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGHWVQW*GRGPPW
Trigger: CCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRCERSW*AFRRDS
Trigger: GCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCA...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTCTTCCCGCACTGGGTaGAGTGGTGGGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGSSRTG*SGGAEG
Trigger: GCCCTCGGCCCCACCACTGCACCCAGTGCGGGAAGA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGGCCTGGCGCCCGTGTaGACCAGCAGGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLGLAPV*TSRCRS
Trigger: GCTGCGACACCTGCTGGTGCACACGGGCGCCAGGCC...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGTGCGGCCACACTGCGTaGAGGAGTAGGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKACGHTA*RSRAWR
Trigger: GCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCA...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGTGGCTGGGCTCCCGGTaGATGCCCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAWLGSR*MPSSSS
Trigger: GCTGCTGCTCGAGGGCATCCACCGGGAGCCCAGCCA...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCAGGCTGGAGCGGCGCTaGAAGCTCTGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGRLERR*KLWPQW
Trigger: CCACTGCGGCCAGAGCTTCCAGCGCCGCTCCAGCCT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGGTGGCGGGCAAGGCTaGCCCGGCGCACAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLGGGQG*PGAQSA
Trigger: AGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACC...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGTGTGGCTGCGCTGGTaGCGGGCCAGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAVWLRW*RARSWV
Trigger: GACCCAGGATCTGGCCCGCCACCAGCGCAGCCACAC...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGTGTGGCTGCGCTGGTaGCGGGCCAGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGVWLRW*RARSWV
Trigger: GACCCAGGATCTGGCCCGCCACCAGCGCAGCCACAC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGTGCCCGGGCTCCGCATaGGTAGCCAGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARCPGSA*VARCRR
Trigger: GCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCA...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTGCAGGCCTCCGCTGTaGAGGACCCCGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGCRPPL*RTPGRW
Trigger: CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGCERSW*AFRRDS
Trigger: GCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCGTTGCGCCGGAAGCTaGGACCGCACGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLARCAGS*DRTSDS
Trigger: GCTGTCAGACGTGCGGTCGCAGCTTCCGGCGCAACG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGAGGTGCCGCCGCAGATaGGCGTTGCGCCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLRCRRR*ALRRKL
Trigger: CAGCTTCCGGCGCAACGCGCATCTGCGGCGGCACCT...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAPQPGL*SPGVLW
Trigger: CCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGG...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGCGGGTTCGGAGGAGTaGGTCAGCAGGTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRAGSEE*VSRCLL
Trigger: GAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGC...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGGCGCAGGGCGGCTTCTaGTCCTGGGCGTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAAQGGF*SWACAS
Trigger: GCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGC...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCCGCACTGGGTGCAGTaGTGGGGCCGAGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAPHWVQ*WGRGPP
Trigger: CGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGTGTGGCTGCGGCGATaGCGGGCCAGGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAVWLRR*RARLEL
Trigger: TAGCTCCAACCTGGCCCGCCATCGCCGCAGCCACAC...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCATCTGAACAGCTGGTaGGCCACCTCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAHLNSW*ATSGLS
Trigger: GCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGCTCAGCGGCTGCTTTaGACTTGGGGGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRAQRLL*TWGKPP
Trigger: TGGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGC...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGAGGGGCCCTGGGGACTaGTTTCTTGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLARGPGD*FLAGPG
Trigger: TCCAGGCCCTGCAAGAAAGCAGTCCCCAGGGCCCCT...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTTCAGGCGAGACAGCTaGGGGAAGCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGFRRDS*GKLTPQ
Trigger: CTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRSPGGG*RSLRRT
Trigger: GGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACT...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCGGTGGGCCACCAGGTaGTCGCTGCGCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRRWATR*SLRRKA
Trigger: GGCCTTCCGGCGCAGCGAGCACCTGGTGGCCCACCG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGGGAAGGGACATTCCTaGAGGCCTCCGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAGKGHS*RPPLWR
Trigger: CCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGGAAGGGACATTCCTaGAGGCCTCCGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGGKGHS*RPPLWR
Trigger: CCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGCTCAGGGACGCCCGTaGCCCCATGTCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAAQGRP*PHVLLI
Trigger: TATCAGGAGGACATGGGGCCACGGGCGTCCCTGAGC...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTCTTGGGGCTGTGGCTaGGGACCTGGGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGSWGCG*GPGKHT
Trigger: GGTGTGCTTCCCAGGTCCCCAGCCACAGCCCCAAGA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCCCCGTCCGAGCGACTaGGCGCAAGGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRPRPSD*AQGSPG
Trigger: GCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCACTGCAACTCCGGATTaGGCTCGGGGACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGTATPD*ARGRPQ
Trigger: CTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGGGGTGCGAGCGCAGCTaGTGCGCCTTCAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARGCERS*CAFRRD
Trigger: GTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCC...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCGGCGCTGGAAGCTCTaGCCGCAGTGGGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARRRWKL*PQWEHR
Trigger: CCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCCG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGGTGTGCACCCTCCGGTaGGCCACCAGGTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARVCTLR*ATRCSL
Trigger: CAGCGAGCACCTGGTGGCCCACCGGAGGGTGCACAC...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCTGCCCGGGCTCCGCATaGGTAGCCAGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRCPGSA*VARCRR
Trigger: GCGGCGGCACCTGGCTACCCATGCGGAGCCCGGGCA...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGCGTCTCGCGGGCGTaGGTGCGCAGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRSVSRA*VRRWRS
Trigger: GCTGCGCCACCTGCGCACCCACGCCCGCGAGACGCT...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCATGGTGAGGGGCCCTaGGGACCAGCGGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRHGEGP*GPAAPR
Trigger: ACGCGGGGCCGCTGGTCCCCAGGGCCCCTCACCATG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538082.5
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGTTCAGGCGAGACAGCTaGGGGAAGCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLFRRDS*GKLTPQ
Trigger: CTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAA...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCTGCGCCAGCAGGTGCTaGACAAGGCTGGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRCASRC*TRLARR
Trigger: GCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCA...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPSPGGG*RSLRRT
Trigger: GGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACT...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCGGTGGGCCACCAGGTaGTCGCTGCGCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGRWATR*SLRRKA
Trigger: GGCCTTCCGGCGCAGCGAGCACCTGGTGGCCCACCG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCGGTGGGCCACCAGGTaGTCGCTGCGCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPRWATR*SLRRKA
Trigger: GGCCTTCCGGCGCAGCGAGCACCTGGTGGCCCACCG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGTCTTCCCGCACTGGGTaGAGTGGTGGGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRASSRTG*SGGAEG
Trigger: GCCCTCGGCCCCACCACTGCACCCAGTGCGGGAAGA...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCCGCAGATGCGCGTTaGGCCGGAAGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGAADAR*AGSCDR
Trigger: GCGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGCTCGGCCTGCTCCTaGCCGGGCTCCGCATGGGTA +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGSACS*PGSAWV
Trigger: TACCCATGCGGAGCCCGGGCAGGAGCAGGCCGAGCC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGTGCGGCCACACTGCGTaGAGGAGTAGGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRACGHTA*RSRAWR
Trigger: GCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCA...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCCTTCACTGCGGGGATaGCTCCCTAACGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARPSLRG*LPNASP
Trigger: GGGGCTGGCGTTAGGGAGGCATCCCCGCAGTGAAGG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGCCAAGCATCCTTCACTaGGGGGATGCCTCCCTAACG +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRPSILH*GDASLT
Trigger: CGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGG...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGTTGACTTCCCCCAGCTaGTCCTGCTCCACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKALTSPS*SCSTAA
Trigger: AGCTGCCGTGGAGCAGGAGCAGCTGGGGGAAGTCAA...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTCCTTCTTGGGGCTGTaGCTGGGGACCTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGSFLGL*LGTWEA
Trigger: TGCTTCCCAGGTCCCCAGCCACAGCCCCAAGAAGGA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGCTTTCTTGCAGGGCCTaGAATGTCTTCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRLSCRA*NVFWGP
Trigger: GGGGCCCCAGAAGACATTCCAGGCCCTGCAAGAAAG...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCATGGTGAGGGGCCCTaGGGACTGCTTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAHGEGP*GLLSCR
Trigger: CCTGCAAGAAAGCAGTCCCCAGGGCCCCTCACCATG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCCCCGTCCGAGCGACTaGGCGCAAGGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRPRPSD*AQGSPG
Trigger: GCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCTCTGGCGGAAGCGGTaGCCGCACAGGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRLWRKR*PHRWQA
Trigger: CGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGAGGCTGGCGCGGCGCTaGAAGCCGCGGCCGCACTCT +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPRLARR*KPRPHS
Trigger: AGAGTGCGGCCGCGGCTTCCAGCGCCGCGCCAGCCT...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGTGCTGCACAAGGCTaGCGCGGCGCTGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGAAQG*RGAGSR
Trigger: GCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGGFWS*ACASRC
Trigger: GCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRGGFWS*ACASRC
Trigger: GCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCC...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGCGCAGGGCGGCTTCTaGTCCTGGGCGTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGAQGGF*SWACAS
Trigger: GCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACT +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAQDIGQ*RRFGLT
Trigger: AGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCAAGCTCTGGCCGCAGTaGGAGCACAGGACATCGGTC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGKLWPQ*EHRTSV
Trigger: GACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGTGGCGGGCAAGGCTaGCCCGGCGCACAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGGGQG*PGAQSA
Trigger: AGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGGCCGAGGGCCACCGTaGGTCAGCAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGGRGPP*VSRWRA
Trigger: TGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGCCAGATCCTGGGTCTaGCCGAAACTCTTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGARSWV*PKLFPH
Trigger: GTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCATCTGAACAGCTGGTaGGCCACCTCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARHLNSW*ATSGLS
Trigger: GCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCTTTTCCTCCAAGGTaGCGTCTGCACGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPFPPR*RLHGDN
Trigger: GTTGTCCCCGTGCAGACGTCACCTTGGAGGAAAAGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCTCCTCTGGCCATGGTaGGGGGCCCTGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGLLWPW*GALGTA
Trigger: AGCAGTCCCCAGGGCCCCTCACCATGGCCAGAGGAG...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLRSPRR*TATPDW
Trigger: CCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGTGGGCTCCCGGTGGATaGCCTCGAGCAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAWAPGG*PRAAAP
Trigger: TGGTGCTGCTGCTCGAGGGCATCCACCGGGAGCCCA...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCTTGTCTGGGGTTCTaGTTCCGAATCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPCLGF*FRIPGG
Trigger: ACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGTTCAGGCGAGACAGCTaGGGGAAGCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARFRRDS*GKLTPQ
Trigger: CTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAA...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGAGTGGGTCAGCAGGTaGTTGCTCAGGTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLEWVSR*LLRCEL
Trigger: GAGCTCGCACCTGAGCAAGCACCTGCTGACCCACTC...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVSPGGG*RSLRRT
Trigger: GGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACT...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCTTCCCGCACTGGGTaGAGTGGTGGGGCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGSSRTG*SGGAEG
Trigger: GCCCTCGGCCCCACCACTGCACCCAGTGCGGGAAGA...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCCAGGTTGGAGCTATTaGGGAAACGGTGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLPGWSY*GNGGRR
Trigger: CCTGCGGCCACCGTTTCCGCAATAGCTCCAACCTGG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGCCGCAGATGCGCGTTaGGCCGGAAGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWAADAR*AGSCDR
Trigger: GCGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGGCTCGGCCTGCTCCTaGCCGGGCTCCGCATGGGTA +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWGSACS*PGSAWV
Trigger: TACCCATGCGGAGCCCGGGCAGGAGCAGGCCGAGCC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGGCCTGGCGCCCGTGTaGACCAGCAGGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGGLAPV*TSRCRS
Trigger: GCTGCGACACCTGCTGGTGCACACGGGCGCCAGGCC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCCTTCACTGCGGGGATaGCTCCCTAACGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAPSLRG*LPNASP
Trigger: GGGGCTGGCGTTAGGGAGGCATCCCCGCAGTGAAGG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCAAGCATCCTTCACTaGGGGGATGCCTCCCTAACG +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPSILH*GDASLT
Trigger: CGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCAGGATCTGTTTCTTaGTGTGCAGAGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPGSVS*CAEPAA
Trigger: TGCGGCCGGCTCTGCACACCAAGAAACAGATCCTGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCTGGGCAGCCCTTGGCTaGGGTCGGGGAGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRWAALG*GRGGSS
Trigger: GGATGAGCCTCCCCGACCCCAGCCAAGGGCTGCCCA...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCTGCTAAGATGGGAGTaGGCCAGGCAGCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLLLRWE*ARQPLW
Trigger: CCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCTCTGGCGGAAGCGGTaGCCGCACAGGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRLWRKR*PHRWQA
Trigger: CGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTAGGCTGGCGCGGCGCTaGAAGCCGCGGCCGCACTCT +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGRLARR*KPRPHS
Trigger: AGAGTGCGGCCGCGGCTTCCAGCGCCGCGCCAGCCT...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGAGGCTGGCGCGGCGCTaGAAGCCGCGGCCGCACTCT +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRRLARR*KPRPHS
Trigger: AGAGTGCGGCCGCGGCTTCCAGCGCCGCGCCAGCCT...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGCTGCACAAGGCTaGCGCGGCGCTGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPGAAQG*RGAGSR
Trigger: GCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACC...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCGTGGATCCGCAGGTaGCGCTTGAGGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGAWIRR*RLRLER
Trigger: CCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGGTGGCGGGCAAGGCTaGCCCGGCGCACAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWGGGQG*PGAQSA
Trigger: AGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTCCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGPWVSR*RARLAR
Trigger: CCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGG...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGGCCGAGGGCCACCGTaGGTCAGCAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRGRGPP*VSRWRA
Trigger: TGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCCAGATCCTGGGTCTaGCCGAAACTCTTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLARSWV*PKLFPH
Trigger: GTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGC...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGTGGCGGGCCAGATCCTaGGTCTGGCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLWRARS*VWPKLF
Trigger: GAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCA...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTATTGCGGAAACGGTaGCCGCAGGTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARLLRKR*PQVSQA
Trigger: CGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGCCAGCCCCGCTCTTaGGTCTCTCTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRARQPRS*VSLLSS
Trigger: GGAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGGCCCCATGTCCTCCTaGTACTGGAAGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAGPMSS*YWKHLN
Trigger: GTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCC...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGGCTCAGCGGCTGCTTTaGACTTGGGGGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARAQRLL*TWGKPP
Trigger: TGGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGC...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCTCCTCTGGCCATGGTaGGGGGCCCTGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRLLWPW*GALGTA
Trigger: AGCAGTCCCCAGGGCCCCTCACCATGGCCAGAGGAG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGCCGCTCGTCCGTGTaGGTGCGCATGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGRSSV*VRMCSL
Trigger: CAAGCTGCACATGCGCACTCACACGGACGAGCGGCC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCGGCCGCTCGTCCGTGTaGGTGCGCATGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRGRSSV*VRMCSL
Trigger: CAAGCTGCACATGCGCACTCACACGGACGAGCGGCC...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCTCCAAGGTGACGTCTaGACGGGGACAACTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLLQGDV*TGTTLA
Trigger: GGCAAGAGTTGTCCCCGTGCAGACGTCACCTTGGAG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGAGGGGCCCTGGGGACTaGTTTCTTGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRARGPGD*FLAGPG
Trigger: TCCAGGCCCTGCAAGAAAGCAGTCCCCAGGGCCCCT...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGCERSW*AFRRDS
Trigger: GCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCA...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCCGCGGCCGCACTCTaGGCACAGGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAAAAL*AQEGGF
Trigger: GAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGCCGCGGCCGCACTCTaGGCACAGGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRAAAAL*AQEGGF
Trigger: GAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTTGCGCCAGCAGGTGCTaGACAAGGCTGGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGCASRC*TRLARR
Trigger: GCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCA...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTATGCGCCAGCAGGTGCTaGACAAGGCTGGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVCASRC*TRLARR
Trigger: GCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCA...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCCGCAGATGCGCGTTaGGCCGGAAGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAADAR*AGSCDR
Trigger: GCGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCATGGGTAGCCAGGTaGCGCCGCAGATGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGAWVAR*RRRCAL
Trigger: CAACGCGCATCTGCGGCGGCACCTGGCTACCCATGC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGTGCGGCCACACTGCGTaGAGGAGTAGGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWCGHTA*RSRAWR
Trigger: GCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCA...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGPQPGL*SPGVLW
Trigger: CCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGG...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCCAGGATCTGTTTCTTaGTGTGCAGAGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLPGSVS*CAEPAA
Trigger: TGCGGCCGGCTCTGCACACCAAGAAACAGATCCTGG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGTGGCTGGGCTCCCGGTaGATGCCCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPWLGSR*MPSSSS
Trigger: GCTGCTGCTCGAGGGCATCCACCGGGAGCCCAGCCA...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGCCTGGAATGTCTTCTaGGGCCCCGGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGAWNVF*GPGLSG
Trigger: GCCGCTGAGCCCGGGGCCCCAGAAGACATTCCAGGC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGACTGCAACTCCGGATTaGGCTCGGGGACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRATATPD*ARGRPQ
Trigger: CTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGT...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGGGTGCGAGCGCAGCTaGTGCGCCTTCAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWGCERS*CAFRRD
Trigger: GTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCTCTGGCGGAAGCGGTaGCCGCACAGGTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRLWRKR*PHRWQA
Trigger: CGCCTGCCACCTGTGCGGCCACCGCTTCCGCCAGAG...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGGTGCTGCACAAGGCTaGCGCGGCGCTGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRGAAQG*RGAGSR
Trigger: GCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVGGFWS*ACASRC
Trigger: GCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACT +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARQDIGQ*RRFGLT
Trigger: AGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCGGCGCTGGAAGCTCTaGCCGCAGTGGGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGRRWKL*PQWEHR
Trigger: CCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCCG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCGGCGCTGGAAGCTCTaGCCGCAGTGGGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPRRWKL*PQWEHR
Trigger: CCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCCG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCTGGAGCGGCGCTaGAAGCTCTGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGRLERR*KLWPQW
Trigger: CCACTGCGGCCAGAGCTTCCAGCGCCGCTCCAGCCT...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGAGGCTGGAGCGGCGCTaGAAGCTCTGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPRLERR*KLWPQW
Trigger: CCACTGCGGCCAGAGCTTCCAGCGCCGCTCCAGCCT...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGTGTGCACCCTCCGGTaGGCCACCAGGTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGVCTLR*ATRCSL
Trigger: CAGCGAGCACCTGGTGGCCCACCGGAGGGTGCACAC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGTGGCGGGCAAGGCTaGCCCGGCGCACAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGGGGQG*PGAQSA
Trigger: AGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTACACTGGGTGCAGTGGTaGGGCCGAGGGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVHWVQW*GRGPPW
Trigger: CCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTG...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCACTGGGTGCAGTGGTaGGGCCGAGGGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRHWVQW*GRGPPW
Trigger: CCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTG...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGTGGCGGGCCAGATCCTaGGTCTGGCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARWRARS*VWPKLF
Trigger: GAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCA...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCTATTGCGGAAACGGTaGCCGCAGGTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRALLRKR*PQVSQA
Trigger: CGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGTGTGGCTGCGGCGATaGCGGGCCAGGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGVWLRR*RARLEL
Trigger: TAGCTCCAACCTGGCCCGCCATCGCCGCAGCCACAC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCAGCGTCTCGCGGGCGTaGGTGCGCAGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPSVSRA*VRRWRS
Trigger: GCTGCGCCACCTGCGCACCCACGCCCGCGAGACGCT...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGTGCAGGCCTCCGCTGTaGAGGACCCCGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWCRPPL*RTPGRW
Trigger: CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCAGCCTCCGCCAGCCTaGGGAAGGGCTCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAQPPPA*GRALGK
Trigger: TTTTCCCAGAGCCCTTCCCCAGGCTGGCGGAGGCTG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCGCCAGCCCCGCTCTTaGGTCTCTCTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRRQPRS*VSLLSS
Trigger: GGAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCCTTTTCCTCCAAGGTaGCGTCTGCACGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARPFPPR*RLHGDN
Trigger: GTTGTCCCCGTGCAGACGTCACCTTGGAGGAAAAGG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGGCCGCTCGTCCGTGTaGGTGCGCATGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWGRSSV*VRMCSL
Trigger: CAAGCTGCACATGCGCACTCACACGGACGAGCGGCC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCAGGGAAGGACAGCTGTaGAAGTGGAAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGREGQL*KWKERE
Trigger: TTCCCTCTCCTTCCACTTTCACAGCTGTCCTTCCCT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGATCTGTTTCTTGGTGTaGAGAGCCGGCCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARICFLV*RAGRSQ
Trigger: CTGGCTGCGGCCGGCTCTGCACACCAAGAAACAGAT...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCCCGGGCTCAGCGGCTaGTTTGAACTTGGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGPGLSG*FELGGS
Trigger: GCTTCCCCCAAGTTCAAAGCAGCCGCTGAGCCCGGG...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGCCGCGGCCGCACTCTaGGCACAGGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPAAAAL*AQEGGF
Trigger: GAACCCGCCTTCCTGTGCGCAGAGTGCGGCCGCGGC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCGTTGCGCCGGAAGCTaGGACCGCACGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGRCAGS*DRTSDS
Trigger: GCTGTCAGACGTGCGGTCGCAGCTTCCGGCGCAACG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGTTGCGCCGGAAGCTaGGACCGCACGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWRCAGS*DRTSDS
Trigger: GCTGTCAGACGTGCGGTCGCAGCTTCCGGCGCAACG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGCCGCAGATGCGCGTTaGGCCGGAAGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPAADAR*AGSCDR
Trigger: GCGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTAGGTGCCGCCGCAGATaGGCGTTGCGCCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGRCRRR*ALRRKL
Trigger: CAGCTTCCGGCGCAACGCGCATCTGCGGCGGCACCT...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGGCTCGGCCTGCTCCTaGCCGGGCTCCGCATGGGTA +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPGSACS*PGSAWV
Trigger: TACCCATGCGGAGCCCGGGCAGGAGCAGGCCGAGCC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGGCCTGGCGCCCGTGTaGACCAGCAGGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPGLAPV*TSRCRS
Trigger: GCTGCGACACCTGCTGGTGCACACGGGCGCCAGGCC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGCGGCCACACTGCGTaGAGGAGTAGGGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRCGHTA*RSRAWR
Trigger: GCGCCAGGCCCTACTCCTGCACGCAGTGTGGCCGCA...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWPQPGL*SPGVLW
Trigger: CCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTCCTCGGGCCTCAGCCTaGACTCTGGTCGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGPRASA*TLVAWG
Trigger: ACCCCAGGCGACCAGAGTCCAGGCTGAGGCCCGAGG...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCCAGGATCTGTTTCTTaGTGTGCAGAGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARPGSVS*CAEPAA
Trigger: TGCGGCCGGCTCTGCACACCAAGAAACAGATCCTGG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTATGGGCAGCCCTTGGCTaGGGTCGGGGAGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVWAALG*GRGGSS
Trigger: GGATGAGCCTCCCCGACCCCAGCCAAGGGCTGCCCA...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTTGGGCAGCCCTTGGCTaGGGTCGGGGAGGCTCATCC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGWAALG*GRGGSS
Trigger: GGATGAGCCTCCCCGACCCCAGCCAAGGGCTGCCCA...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCCTGGAATGTCTTCTaGGGCCCCGGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAWNVF*GPGLSG
Trigger: GCCGCTGAGCCCGGGGCCCCAGAAGACATTCCAGGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGCCACGCCTTATTCTCTaGCACATCCTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRPRLIL*HILKGQ
Trigger: CTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGG...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCTGCTAAGATGGGAGTaGGCCAGGCAGCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRALLRWE*ARQPLW
Trigger: CCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCACTGCAACTCCGGATTaGGCTCGGGGACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRTATPD*ARGRPQ
Trigger: CTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGT...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGGGTGCGAGCGCAGCTaGTGCGCCTTCAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRGCERS*CAFRRD
Trigger: GTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCGGGTTCGGAGGAGTaGGTCAGCAGGTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGAGSEE*VSRCLL
Trigger: GAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPGGFWS*ACASRC
Trigger: GCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCGGCGCTGGAAGCTCTaGCCGCAGTGGGAGCACAGG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRRRWKL*PQWEHR
Trigger: CCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGCCG...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCGTGGATCCGCAGGTaGCGCTTGAGGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAWIRR*RLRLER
Trigger: CCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGTGTGCACCCTCCGGTaGGCCACCAGGTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRVCTLR*ATRCSL
Trigger: CAGCGAGCACCTGGTGGCCCACCGGAGGGTGCACAC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGGCCAGATCCTGGGTCTaGCCGAAACTCTTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAARSWV*PKLFPH
Trigger: GTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGC...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGTGTGGCTGCGCTGGTaGCGGGCCAGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVVWLRW*RARSWV
Trigger: GACCCAGGATCTGGCCCGCCACCAGCGCAGCCACAC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGTGGCTGCGGCGATaGCGGGCCAGGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRVWLRR*RARLEL
Trigger: TAGCTCCAACCTGGCCCGCCATCGCCGCAGCCACAC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGCAGGCCTCCGCTGTaGAGGACCCCGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRCRPPL*RTPGRW
Trigger: CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCATCTGAACAGCTGGTaGGCCACCTCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRHLNSW*ATSGLS
Trigger: GCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCGCCCTCAGCCACTTTaGCCTCCAAAATTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLRPQPL*PPKFHC
Trigger: GCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGG +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRRSPRR*TATPDW
Trigger: CCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCACGGCAGCTGGGACTaGTTCTCCAAGCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARHGSWD*FSKHPS
Trigger: TGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGTG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGTTCAGGCGAGACAGCTaGGGGAAGCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWFRRDS*GKLTPQ
Trigger: CTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAA...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCCAGGTTGGAGCTATTaGGGAAACGGTGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRPGWSY*GNGGRR
Trigger: CCTGCGGCCACCGTTTCCGCAATAGCTCCAACCTGG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCATGGGTAGCCAGGTaGCGCCGCAGATGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAWVAR*RRRCAL
Trigger: CAACGCGCATCTGCGGCGGCACCTGGCTACCCATGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGCATGGGTAGCCAGGTaGCGCCGCAGATGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRAWVAR*RRRCAL
Trigger: CAACGCGCATCTGCGGCGGCACCTGGCTACCCATGC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGAAGGGACATTCCTaGAGGCCTCCGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRGKGHS*RPPLWR
Trigger: CCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCTCCTTCTTGGGGCTGTaGCTGGGGACCTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRSFLGL*LGTWEA
Trigger: TGCTTCCCAGGTCCCCAGCCACAGCCCCAAGAAGGA...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCAGGCAATTCCTTCTTaGGGCTGTGGCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAQAIPS*GCGWGP
Trigger: AGGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCCAGGACTATCTGCCTaGGACTCTGCTAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLPGLSA*DSAKMG
Trigger: TCCCATCTTAGCAGAGTCCCAGGCAGATAGTCCTGG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGGGTGCGAGCGCAGCTaGTGCGCCTTCAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPGCERS*CAFRRD
Trigger: GTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCGGGTTCGGAGGAGTaGGTCAGCAGGTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRAGSEE*VSRCLL
Trigger: GAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGAAGCTCTGGCCGCAGTaGGAGCACAGGACATCGGTC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGKLWPQ*EHRTSV
Trigger: GACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTT...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCAGGCTGGAGCGGCGCTaGAAGCTCTGGCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPRLERR*KLWPQW
Trigger: CCACTGCGGCCAGAGCTTCCAGCGCCGCTCCAGCCT...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGCGTGGATCCGCAGGTaGCGCTTGAGGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPAWIRR*RLRLER
Trigger: CCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGTGTGCACCCTCCGGTaGGCCACCAGGTGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPVCTLR*ATRCSL
Trigger: CAGCGAGCACCTGGTGGCCCACCGGAGGGTGCACAC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGTGTGCACCCGTTGGTaGCTGACCAGCTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPVCTRW*LTSCEL
Trigger: GAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACAC...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGGCGGGCCAGATCCTaGGTCTGGCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGWRARS*VWPKLF
Trigger: GAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCA...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGTGTGGCTGCGCTGGTaGCGGGCCAGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPVWLRW*RARSWV
Trigger: GACCCAGGATCTGGCCCGCCACCAGCGCAGCCACAC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCTATTGCGGAAACGGTaGCCGCAGGTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWLLRKR*PQVSQA
Trigger: CGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCTATTGCGGAAACGGTaGCCGCAGGTGTCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPLLRKR*PQVSQA
Trigger: CGCCTGCGACACCTGCGGCCACCGTTTCCGCAATAG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGGATGGCGGGCCAGGTTaGAGCTATTGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRADGGPG*SYCGNG
Trigger: ACCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATC...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGTGTGGCTGCGGCGATaGCGGGCCAGGTTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVVWLRR*RARLEL
Trigger: TAGCTCCAACCTGGCCCGCCATCGCCGCAGCCACAC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCAGCCTCCGCCAGCCTaGGGAAGGGCTCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGQPPPA*GRALGK
Trigger: TTTTCCCAGAGCCCTTCCCCAGGCTGGCGGAGGCTG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTCGATGGGCCCAGCACTaGAGGCTCTTCCGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGRWAQH*RLFRRQ
Trigger: TTGCCTGCGGAAGAGCCTTCAGTGCTGGGCCCATCG...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGCTCAGCGGCTGCTTTaGACTTGGGGGAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGAQRLL*TWGKPP
Trigger: TGGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAAGGGGCCCTGGGGACTaGTTTCTTGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVRGPGD*FLAGPG
Trigger: TCCAGGCCCTGCAAGAAAGCAGTCCCCAGGGCCCCT...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGCCTCCAAAATTTCACTaGTGCCAAGAAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAPPKFH*CQEGTH
Trigger: ATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGG...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTGAGTGGGTCAGCAGGTaGTTGCTCAGGTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGEWVSR*LLRCEL
Trigger: GAGCTCGCACCTGAGCAAGCACCTGCTGACCCACTC...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGGGAAGGGACATTCCTaGAGGCCTCCGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRGKGHS*RPPLWR
Trigger: CCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCGAGGCCAGAAAGCAATaGCTCGGCCAGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWREARKQ*LGQGRT
Trigger: TGTCCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTC...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGTTGACTTCCCCCAGCTaGTCCTGCTCCACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWLTSPS*SCSTAA
Trigger: AGCTGCCGTGGAGCAGGAGCAGCTGGGGGAAGTCAA...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCTCAGGGACGCCCGTaGCCCCATGTCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAQGRP*PHVLLI
Trigger: TATCAGGAGGACATGGGGCCACGGGCGTCCCTGAGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTTCTTGGGGCTGTGGCTaGGGACCTGGGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGSWGCG*GPGKHT
Trigger: GGTGTGCTTCCCAGGTCCCCAGCCACAGCCCCAAGA...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCATGGTGAGGGGCCCTaGGGACTGCTTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPHGEGP*GLLSCR
Trigger: CCTGCAAGAAAGCAGTCCCCAGGGCCCCTCACCATG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGCCACGCCTTATTCTCTaGCACATCCTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLPRLIL*HILKGQ
Trigger: CTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGG...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKAKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCTGCTAAGATGGGAGTaGGCCAGGCAGCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPLLRWE*ARQPLW
Trigger: CCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTACTGCAACTCCGGATTaGGCTCGGGGACGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGTATPD*ARGRPQ
Trigger: CTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGT...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGCGGGTTCGGAGGAGTaGGTCAGCAGGTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGAGSEE*VSRCLL
Trigger: GAGCAAGCACCTGCTGACCCACTCCTCCGAACCCGC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACT +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGQDIGQ*RRFGLT
Trigger: AGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGAAGCTCTGGCCGCAGTaGGAGCACAGGACATCGGTC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPKLWPQ*EHRTSV
Trigger: GACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTT...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGAAGCTCTGGCCGCAGTaGGAGCACAGGACATCGGTC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWKLWPQ*EHRTSV
Trigger: GACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTT...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGTGTGCACCCGTTGGTaGCTGACCAGCTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVVCTRW*LTSCEL
Trigger: GAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACAC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGTGTGCACCCGTTGGTaGCTGACCAGCTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGVCTRW*LTSCEL
Trigger: GAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACAC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCCAGATCCTGGGTCTaGCCGAAACTCTTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPARSWV*PKLFPH
Trigger: GTGCGGGAAGAGTTTCGGCCAGACCCAGGATCTGGC...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGTGGCGGGCCAGATCCTaGGTCTGGCCGAAACTCTTC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPWRARS*VWPKLF
Trigger: GAAGAGTTTCGGCCAGACCCAGGATCTGGCCCGCCA...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGCCCCATGTCCTCCTaGTACTGGAAGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGPMSS*YWKHLN
Trigger: GTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCCTTTTCCTCCAAGGTaGCGTCTGCACGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPPFPPR*RLHGDN
Trigger: GTTGTCCCCGTGCAGACGTCACCTTGGAGGAAAAGG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGATGGGCCCAGCACTaGAGGCTCTTCCGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPRWAQH*RLFRRQ
Trigger: TTGCCTGCGGAAGAGCCTTCAGTGCTGGGCCCATCG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCTCCAAGGTGACGTCTaGACGGGGACAACTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPLQGDV*TGTTLA
Trigger: GGCAAGAGTTGTCCCCGTGCAGACGTCACCTTGGAG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCCCGGGCTCAGCGGCTaGTTTGAACTTGGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPPGLSG*FELGGS
Trigger: GCTTCCCCCAAGTTCAAAGCAGCCGCTGAGCCCGGG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCCTTGTCTGGGGTTCTaGTTCCGAATCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWPCLGF*FRIPGG
Trigger: ACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGAGTGGGTCAGCAGGTaGTTGCTCAGGTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGEWVSR*LLRCEL
Trigger: GAGCTCGCACCTGAGCAAGCACCTGCTGACCCACTC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AWDSAKMGVGQAAPLGSSPQPGL*SPGVLW
Trigger: CCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGG...AGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCTCTTGGGGCTGTGGCTaGGGACCTGGGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPSWGCG*GPGKHT
Trigger: GGTGTGCTTCCCAGGTCCCCAGCCACAGCCCCAAGA...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCAGGCAATTCCTTCTTaGGGCTGTGGCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWQAIPS*GCGWGP
Trigger: AGGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCCAGGACTATCTGCCTaGGACTCTGCTAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAPGLSA*DSAKMG
Trigger: TCCCATCTTAGCAGAGTCCCAGGCAGATAGTCCTGG...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTACAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACT +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVQDIGQ*RRFGLT
Trigger: AGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTG...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGTGTGCACCCGTTGGTaGCTGACCAGCTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPVCTRW*LTSCEL
Trigger: GAGCTCGCAGCTGGTCAGCCACCAACGGGTGCACAC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGATGGCGGGCCAGGTTaGAGCTATTGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRDGGPG*SYCGNG
Trigger: ACCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCAGCCTCCGCCAGCCTaGGGAAGGGCTCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPQPPPA*GRALGK
Trigger: TTTTCCCAGAGCCCTTCCCCAGGCTGGCGGAGGCTG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCCCCATGTCCTCCTaGTACTGGAAGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPGPMSS*YWKHLN
Trigger: GTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCC...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCGCCCTCAGCCACTTTaGCCTCCAAAATTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGRPQPL*PPKFHC
Trigger: GCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCG...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGG +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPRSPRR*TATPDW
Trigger: CCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCACGGCAGCTGGGACTaGTTCTCCAAGCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPHGSWD*FSKHPS
Trigger: TGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGTG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGATCTGTTTCTTGGTGTaGAGAGCCGGCCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRICFLV*RAGRSQ
Trigger: CTGGCTGCGGCCGGCTCTGCACACCAAGAAACAGAT...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTACCTTGTCTGGGGTTCTaGTTCCGAATCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVPCLGF*FRIPGG
Trigger: ACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGG...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCCTCCAAAATTTCACTaGTGCCAAGAAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARPPKFH*CQEGTH
Trigger: ATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTATCCGCGCAGATGAACTaGAACTCCGGATTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVSAQMN*NSGLGS
Trigger: CGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGA...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGAGGCCAGAAAGCAATaGCTCGGCCAGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGEARKQ*LGQGRT
Trigger: TGTCCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTCTTTCTTGCAGGGCCTaGAATGTCTTCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGLSCRA*NVFWGP
Trigger: GGGGCCCCAGAAGACATTCCAGGCCCTGCAAGAAAG...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGATGGCGGGCCAGGTTaGAGCTATTGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGDGGPG*SYCGNG
Trigger: ACCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATC...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGGATACTGGAAGCATCTaGACAGCTGGTGAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWDTGSI*TAGEPP
Trigger: AGGTGGCTCACCAGCTGTTCAGATGCTTCCAGTATC...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCGCCCTCAGCCACTTTaGCCTCCAAAATTTCACTGC +
Preference number: 4 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRRPQPL*PPKFHC
Trigger: GCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCCTCAGCCACTTTaGCCTCCAAAATTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GGKGHSCRPPLWRTPGRWRPQPL*PPKFHC
Trigger: GCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCG...CCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGGAAGGACAGCTGTaGAAGTGGAAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGREGQL*KWKERE
Trigger: TTCCCTCTCCTTCCACTTTCACAGCTGTCCTTCCCT...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGAGGGAAGGACAGCTGTaGAAGTGGAAGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPREGQL*KWKERE
Trigger: TTCCCTCTCCTTCCACTTTCACAGCTGTCCTTCCCT...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGAGGCCAGAAAGCAATaGCTCGGCCAGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPEARKQ*LGQGRT
Trigger: TGTCCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCCTTCACTGCGGGGATaGCTCCCTAACGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SASESQGVCRPRLILWHIPSLRG*LPNASP
Trigger: GGGGCTGGCGTTAGGGAGGCATCCCCGCAGTGAAGG...GATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCAGGCAATTCCTTCTTaGGGCTGTGGCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPQAIPS*GCGWGP
Trigger: AGGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: GHSCRPPLWRTPGRWRRAKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...CGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCCCCGTCCGAGCGACTaGGCGCAAGGCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRPRPSD*AQGSPG
Trigger: GCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGGCGCAGGGCGGCTTCTaGTCCTGGGCGTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRAQGGF*SWACAS
Trigger: GCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGC...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRPWVSR*RARLAR
Trigger: CCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCGATGGCGGGCCAGGTTaGAGCTATTGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPDGGPG*SYCGNG
Trigger: ACCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATC...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp CTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCTCACGCCAGCCCCGCTCTTaGGTCTCTCTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPNPRGCAGHALFSGTSSRQPRS*VSLLSS
Trigger: GGAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCG...TGAGGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR TCA 90 bp TCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCATCTGAACAGCTGGTaGGCCACCTCGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SASESQGVCRPRLILWHIHLNSW*ATSGLS
Trigger: GCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATG...GATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp GCCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTCCAGGATCTGTTTCTTaGTGTGCAGAGCCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: AWDSAKMGVGQAAPLGSSPGSVS*CAEPAA
Trigger: TGCGGCCGGCTCTGCACACCAAGAAACAGATCCTGG...AGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp ATTCCTCCTTGTCTGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCTGCTAAGATGGGAGTaGGCCAGGCAGCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IPPCLGFCFRIPGGVQATLLRWE*ARQPLW
Trigger: CCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAG...CGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR TCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCTCCTCTGGCCATGGTaGGGGGCCCTGGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRLLWPW*GALGTA
Trigger: AGCAGTCCCCAGGGCCCCTCACCATGGCCAGAGGAG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCCACGGCAGCTGGGACTaGTTCTCCAAGCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: GVLLPNPRGCAGHALFSGHGSWD*FSKHPS
Trigger: TGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGTG...GCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp CTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCATCTGTTTCTTGGTGTaGAGAGCCGGCCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLPNPRGCAGHALFSGTSICFLV*RAGRSQ
Trigger: CTGGCTGCGGCCGGCTCTGCACACCAAGAAACAGAT...GGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp CCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTTGAATCCCAGGGGGTGTaGAGGCCACGCCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: PGTLLRWEWARQPLWALLESQGV*RPRLIL
Trigger: GAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTC...AAGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp GGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACCCTTGTCTGGGGTTCTaGTTCCGAATCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSASESQGVCRPRLILWHPCLGF*FRIPGG
Trigger: ACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGG...GTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGAGGTGCCGCCGCAGATaGGCGTTGCGCCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRRCRRR*ALRRKL
Trigger: CAGCTTCCGGCGCAACGCGCATCTGCGGCGGCACCT...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp CCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTTCCAAGCATCCTTCACTaGGGGGATGCCTCCCTAACG +
Preference number: 4 (lower is better)
Translates to: PGTLLRWEWARQPLWALLPSILH*GDASLT
Trigger: CGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGG...AAGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp TTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCTCAAGCTCAGGGACGCCCGTaGCCCCATGTCCTCCTGATA +
Preference number: 4 (lower is better)
Translates to: FRIPGGVQATPYSLAHPQAQGRP*PHVLLI
Trigger: TATCAGGAGGACATGGGGCCACGGGCGTCCCTGAGC...TTGAGGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGGCCTGGAATGTCTTCTaGGGCCCCGGGCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRAWNVF*GPGLSG
Trigger: GCCGCTGAGCCCGGGGCCCCAGAAGACATTCCAGGC...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCCACGCCTTATTCTCTaGCACATCCTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRPRLIL*HILKGQ
Trigger: CTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGG...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTCCACGCCTTATTCTCTaGCACATCCTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGPRLIL*HILKGQ
Trigger: CTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGG...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp CTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCGGCCCCATGTCCTCCTaGTACTGGAAGCATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLPNPRGCAGHALFSGTSGPMSS*YWKHLN
Trigger: GTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCC...GGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTACCTCCAAAATTTCACTaGTGCCAAGAAGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVPPKFH*CQEGTH
Trigger: ATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGG...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRCERSW*AFRRDS
Trigger: GCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCA...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGGCATGGGTAGCCAGGTaGCGCCGCAGATGCGCGTTG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRAWVAR*RRRCAL
Trigger: CAACGCGCATCTGCGGCGGCACCTGGCTACCCATGC...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCGATGGGCCCAGCACTaGAGGCTCTTCCGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRRWAQH*RLFRRQ
Trigger: TTGCCTGCGGAAGAGCCTTCAGTGCTGGGCCCATCG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp GCCTGGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTCCACGCCTTATTCTCTaGCACATCCTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AWDSAKMGVGQAAPLGSSPRLIL*HILKGQ
Trigger: CTGACCTTTGAGGATGTGCCAGAGAATAAGGCGTGG...AGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR TCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRRSPRR*TATPDW
Trigger: CCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR TCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGCCGCTCGTCCGTGTaGGTGCGCATGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQGRSSV*VRMCSL
Trigger: CAAGCTGCACATGCGCACTCACACGGACGAGCGGCC...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCCAGGTTGGAGCTATTaGGGAAACGGTGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRPGWSY*GNGGRR
Trigger: CCTGCGGCCACCGTTTCCGCAATAGCTCCAACCTGG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGCGTTGCGCCGGAAGCTaGGACCGCACGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQRCAGS*DRTSDS
Trigger: GCTGTCAGACGTGCGGTCGCAGCTTCCGGCGCAACG...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TTTAAATTCCTCCTTGTCTGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGTTGACTTCCCCCAGCTaGTCCTGCTCCACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FKFLLVWGSASESQGVCRLTSPS*SCSTAA
Trigger: AGCTGCCGTGGAGCAGGAGCAGCTGGGGGAAGTCAA...CCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGTCCGCGCAGATGAACTaGAACTCCGGATTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRSAQMN*NSGLGS
Trigger: CGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGA...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGAAATTCCTCCTTGTCTaGGGTTCTGCTTCCGAATCC +
Preference number: 4 (lower is better)
Translates to: WGSASESQGVCRPRLILWKFLLV*GSASES
Trigger: GGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTT...CCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
3UTR CAA 72 bp GATGGGAGTGGGCCAGGCAGCCCCTTTGGGCTCTTCTaGTTTAAATTCCTCCTTGTCTGGGGTTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DGSGPGSPFGLF*FKFLLVWGSAS
Trigger: GGAAGCAGAACCCCAGACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCCCACTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR GCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGAGTGGGTCAGCAGGTaGTTGCTCAGGTGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQEWVSR*LLRCEL
Trigger: GAGCTCGCACCTGAGCAAGCACCTGCTGACCCACTC...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR GCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGATCTGTTTCTTGGTGTaGAGAGCCGGCCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQICFLV*RAGRSQ
Trigger: CTGGCTGCGGCCGGCTCTGCACACCAAGAAACAGAT...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252463.6
ENST00000576985.6
CDS-3UTR GCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGTCCGCGCAGATGAACTaGAACTCCGGATTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQSAQMN*NSGLGS
Trigger: CGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGA...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGCTTTCTTGCAGGGCCTaGAATGTCTTCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQLSCRA*NVFWGP
Trigger: GGGGCCCCAGAAGACATTCCAGGCCCTGCAAGAAAG...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CCA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGCCAGGACTATCTGCCTaGGACTCTGCTAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQPGLSA*DSAKMG
Trigger: TCCCATCTTAGCAGAGTCCCAGGCAGATAGTCCTGG...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp GGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTaGCGGAAGGCGGGCCAAGCTAGTACAGCGTCTCGCGGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: GLRCGGPRVGGAGRG*RKAGQASTASRGRG
Trigger: CCCACGCCCGCGAGACGCTGTACTAGCTTGGCCCGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp TGCTCAGCCCGCTGCCCCACCCTCTCACCAGCGGCCCCGCGTGGCTaGGCTCCCGGTGGATGCCCTCGAGCAGCAGCACCACCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CSARCPTLSPAAPRG*APGGCPRAAAPPPP
Trigger: GGGAGGAGGTGGTGCTGCTGCTCGAGGGCATCCACCGGGAGCCCAGCCACGCGGGGCCGCTGGTGAGAGGGTGGGGCAGCGGGCTGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571903.5
ENST00000577059.1
CDS-3UTR CAA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCGCCGCAGATGCGCGTaGCGCCGGAAGCTGCGACCG +
Preference number: 5 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARRRRCA*RRKLRP
Trigger: CGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGCG...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 90 bp AGTCGCTGCACACGAAGGGCCTCCGGTCGGAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACCGGCGGTCCTTGTCCCTGGCGTGGA +
Preference number: 5 (lower is better)
Translates to: SRCTRRASGRSPGGG*RSLRRTGGPCPWRG
Trigger: TCCACGCCAGGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACTCCGACCGGAGGCCCTTCGTGTGCAGCGACT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp CACTGGGTGCAGTGGTGGGGCCGAGGGCCACCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGGCGCACAAAGCGCTTCCCGCACTGC +
Preference number: 5 (lower is better)
Translates to: HWVQWWGRGPPWVSR*RARLARRTKRFPHC
Trigger: GCAGTGCGGGAAGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAACTGCAACTCCGGATaGGGCTCGGGGACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRNCNSG*GSGTPS
Trigger: TGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTT...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGGTGCGCATGTGCAGCTaGAGAATGGAGCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AGLRCGGPRVGGAGRGWRVRMCS*RMELRP
Trigger: CGGCCGCAGCTCCATTCTCAAGCTGCACATGCGCAC...CCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp GGCGCTTCGGCCTTACTCTCAGGAGCGCAGGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGCTGCACAAGGCTGGCGCGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GASALLSGAQGGFWS*ACASRCCTRLARRW
Trigger: CCAGCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGCCGAAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGAACTGCAACTCCGGATaGGGCTCGGGGACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: CRPPLWRTPGRWRRARLANCNSG*GSGTPS
Trigger: TGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTT...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGTGCGCATGTGCAGCTaGAGAATGGAGCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: CRPPLWRTPGRWRRARLAVRMCS*RMELRP
Trigger: CGGCCGCAGCTCCATTCTCAAGCTGCACATGCGCAC...CGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCCGCCGCAGATGCGCGTaGCGCCGGAAGCTGCGACCG +
Preference number: 5 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRRRRCA*RRKLRP
Trigger: CGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGCG...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGACGCCAGCCCCGCTCTaGGGTCTCTCTCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLTPAPL*GLSPLL
Trigger: GAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCGT...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS CCA 90 bp CCATCTTCACCAGGGCCGCTAGCCGCAGCGCCCCGTCCGAGCGACTaGGCGCAAGGCTCTCCCGGCACCCCAGGACTATCTGCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PSSPGPLAAAPRPSD*AQGSPGTPGLSAWD
Trigger: GTCCCAGGCAGATAGTCCTGGGGTGCCGGGAGAGCCTTGCGCCCAGTCGCTCGGACGGGGCGCTGCGGCTAGCGGCCCTGGTGAAGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp AGTGGCGGCGCTTCGGCCTTACTCTCAGGAGCGCAGGGCGGCTTCTaGTCCTGGGCGTGCGCCAGCAGGTGCTGCACAAGGCTGGCGCGG +
Preference number: 5 (lower is better)
Translates to: SGGASALLSGAQGGF*SWACASRCCTRLAR
Trigger: CCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGCCGAAGCGCCGCCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCAGGCAATTCCTTCTaGGGGCTGTGGCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLAGNSF*GLWLGT
Trigger: GGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTGC...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTCAGGCTGGGCAGCCCTaGGCTGGGGTCGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GCGGKGHSCRPPLWRTPGQAGQP*AGVGEA
Trigger: AGCCTCCCCGACCCCAGCCAAGGGCTGCCCAGCCTG...ACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGCAGGCTGGGCAGCCCTaGGCTGGGGTCGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRQAGQP*AGVGEA
Trigger: AGCCTCCCCGACCCCAGCCAAGGGCTGCCCAGCCTG...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGCGGCTGCTTTGAACTaGGGGGAAGCCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGAAALN*GEASTV
Trigger: GACAGTGGAGGCTTCCCCCAAGTTCAAAGCAGCCGC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGAACTGCAACTCCGGATaGGGCTCGGGGACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLNCNSG*GSGTPS
Trigger: TGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTT...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 90 bp CAAAGGCACAGGAAGGAGCGCCCAGCCGGGTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGCTGCGGGAAGCTCACCCCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: QRHRKERPAGCERSW*AFRRDSCGKLTPQS
Trigger: GGACTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCCGGCTGGGCGCTCCTTCCTGTGCCTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGGTGCGCATGTGCAGCTaGAGAATGGAGCTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: HSCRPPLWRTPGRWRRARVRMCS*RMELRP
Trigger: CGGCCGCAGCTCCATTCTCAAGCTGCACATGCGCAC...CCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGCGCCGCAGATGCGCGTaGCGCCGGAAGCTGCGACCG +
Preference number: 5 (lower is better)
Translates to: CGGKGHSCRPPLWRTPGRRRRCA*RRKLRP
Trigger: CGGTCGCAGCTTCCGGCGCAACGCGCATCTGCGGCG...CCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 90 bp CCAGCCGGGTGCGAGCGCAGCTGGTGCGCCTTCAGGCGAGACAGCTaGGGGAAGCTCACCCCGCAGTCCGCGCAGATGAACTGCAACTCC +
Preference number: 5 (lower is better)
Translates to: PAGCERSWCAFRRDS*GKLTPQSAQMNCNS
Trigger: GGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCCGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp GCGCTGGAAGCTCTGGCCGCAGTGGGAGCACAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACTCTCAGGAGCGCAGGGCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: ALEALAAVGAQDIGQ*RRFGLTLRSAGRLL
Trigger: CAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTGTGCTCCCACTGCGGCCAGAGCTTCCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCGGCTCAGCGGCTGCTTaGAACTTGGGGGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRGSAAA*NLGEAS
Trigger: GGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGCC...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGGCCAGGCAGCCCCTTaGGGCTCTTCTTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGGQAAP*GSSCLN
Trigger: ATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCC...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp AGCGACTGGGCGCAAGGCTCTCCCGGCACCCCAGGACTATCTGCCTaGGACTCTGCTAAGATGGGAGTGGGCCAGGCAGCCCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SDWAQGSPGTPGLSA*DSAKMGVGQAAPLG
Trigger: GCCCAAAGGGGCTGCCTGGCCCACTCCCATCTTAGCAGAGTCCCAGGCAGATAGTCCTGGGGTGCCGGGAGAGCCTTGCGCCCAGTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CCA 90 bp GCATCTGAACAGCTGGTGAGCCACCTCGGGCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGGGCTGACAGCCTCCTCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: ASEQLVSHLGPQPGL*SPGVLWADSLLLLQ
Trigger: CTGGAGGAGGAGGAGGCTGTCAGCCCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS-3UTR CAA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCTCAGCGGCTGCTTaGAACTTGGGGGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRGSAAA*NLGEAS
Trigger: GGAGGCTTCCCCCAAGTTCAAAGCAGCCGCTGAGCC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCGACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTG +
Preference number: 5 (lower is better)
Translates to: LRCGGPRVGGAGRGWRKATPSAT*TSKISL
Trigger: CAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGT...CGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTACGCCAGCCCCGCTCTaGGGTCTCTCTCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGTPAPL*GLSPLL
Trigger: GAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCGT...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538082.5
ENST00000576985.6
CDS TCA 90 bp TCAGGCGAGACAGCTGCGGGAAGCTCACCCCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGGGCTCGGGGACGCCCTCAGCCACTT +
Preference number: 5 (lower is better)
Translates to: SGETAAGSSPRSPRR*TATPDWARGRPQPL
Trigger: AAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCAGCTGTCTCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS GCA 90 bp CGAGACAGCTGCGGGAAGCTCACCCCGCAGTCCGCGCAGATGAACTaGAACTCCGGATTGGGCTCGGGGACGCCCTCAGCCACTTTGACC +
Preference number: 5 (lower is better)
Translates to: RDSCGKLTPQSAQMN*NSGLGSGTPSATLT
Trigger: GGTCAAAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCAGCTGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCAGGCAATTCCTTCTaGGGGCTGTGGCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAGNSF*GLWLGT
Trigger: GGTCCCCAGCCACAGCCCCAAGAAGGAATTGCCTGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCGGCTGCTTTGAACTaGGGGGAAGCCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRAAALN*GEASTV
Trigger: GACAGTGGAGGCTTCCCCCAAGTTCAAAGCAGCCGC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCTGTTTAAATTCCTCCTaGTCTGGGGTTCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGCLNSS*SGVLLP
Trigger: CGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTG +
Preference number: 5 (lower is better)
Translates to: SCRPPLWRTPGRWRRARLTPSAT*TSKISL
Trigger: CAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGT...CAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTAACTGCAACTCCGGATaGGGCTCGGGGACGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VVGRDIPAGLRCGGPRVGNCNSG*GSGTPS
Trigger: TGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTT...ACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGCGGCTGCTTTGAACTaGGGGGAAGCCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVAAALN*GEASTV
Trigger: GACAGTGGAGGCTTCCCCCAAGTTCAAAGCAGCCGC...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTGGCGGAAGGCCCCTTTGGGCTCTTCTaGTTTAAATTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: PPLWRTPGRWRRARLAEGPFGLF*FKFLLV
Trigger: GACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGG...GCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACAGCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGATGGCGGGCCAGGTaGGAGCTATTGCGGAAACGG +
Preference number: 5 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPRWRAR*ELLRKR
Trigger: CCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATCG...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS TCA 90 bp TCAGGGACGCCCGTGGCCCCATGTCCTCCTGATACTGGAAGCATCTaGACAGCTGGTGAGCCACCTCGGGCCTCAGCCTGGACTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SGTPVAPCPPDTGSI*TAGEPPRASAWTLV
Trigger: GACCAGAGTCCAGGCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCCACGGGCGTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS-3UTR CAA 90 bp GGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGGCCAGGCAGCCCCTTaGGGCTCTTCTTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GVWWEGTFLQASAVEDPGGQAAP*GSSCLN
Trigger: ATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCC...CCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS TCA 90 bp CAGCTTGACTTCCCCCAGCTGCTCCTGCTCCACGGCAGCTGGGACTaGTTCTCCAAGCATCCTTCACTGCGGGGATGCCTCCCTAACGCC +
Preference number: 5 (lower is better)
Translates to: QLDFPQLLLLHGSWD*FSKHPSLRGCLPNA
Trigger: GGCGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGTGGAGCAGGAGCAGCTGGGGGAAGTCAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS GCA 90 bp TCCTGCTCCACGGCAGCTGGGACTGATTCTCCAAGCATCCTTCACTaGGGGGATGCCTCCCTAACGCCAGCCCCGCTCTTGGGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SCSTAAGTDSPSILH*GDASLTPAPLLGLS
Trigger: AGAGAGACCCAAGAGCGGGGCTGGCGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGTGGAGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS-3UTR CAA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGGCCAGGCAGCCCCTTaGGGCTCTTCTTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRGQAAP*GSSCLN
Trigger: ATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCC...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGCCAGGCAGCCCCTTaGGGCTCTTCTTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPGQAAP*GSSCLN
Trigger: ATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCC...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAGGTGGCGCACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTG +
Preference number: 5 (lower is better)
Translates to: GKGHSCRPPLWRTPGRWRTPSAT*TSKISL
Trigger: CAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGT...GCGCCACCTACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp CTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCTTATTCTCTGGCACATCCTCAACGCCAGCCCCGCTCTaGGGTCTCTCTCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPNPRGCAGHALFSGTSSTPAPL*GLSPLL
Trigger: GAGGAGAGGAGAGAGACCCAAGAGCGGGGCTGGCGT...TGAGGATGTGCCAGAGAATAAGGCGTGGCCTGCACACCCCCTGGGATTCGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CAA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGCAGGCTGGGCAGCCCTaGGCTGGGGTCGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQQAGQP*AGVGEA
Trigger: AGCCTCCCCGACCCCAGCCAAGGGCTGCCCAGCCTG...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGTGTTTAAATTCCTCCTaGTCTGGGGTTCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: WGVVGRDIPAGLRCGGPRCLNSS*SGVLLP
Trigger: CGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA...CCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGGGTAACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTG +
Preference number: 5 (lower is better)
Translates to: GVVGRDIPAGLRCGGPRVTPSAT*TSKISL
Trigger: CAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGT...TACCCGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCCGCCCTTTGGGCTCTTCTaGTTTAAATTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: VGCGGKGHSCRPPLWRTPPFGLF*FKFLLV
Trigger: GACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGG...CGGGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp AAGTGGGGTGTGGTGGGAAGGGACATTCCTGCAGGCCTCCGCTGTGGAGGACCCTGTTTAAATTCCTCCTaGTCTGGGGTTCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: KWGVVGRDIPAGLRCGGPCLNSS*SGVLLP
Trigger: CGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA...GGGTCCTCCACAGCGGAGGCCTGCAGGAATGTCCCTTCCCACCACACCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp GGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGGGAAGGCGATGGCGGGCCAGGTaGGAGCTATTGCGGAAACGG +
Preference number: 5 (lower is better)
Translates to: GRFNYIAEARKQCLGQGRRWRAR*ELLRKR
Trigger: CCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATCG...CCTTCCCTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGCGATGGCGGGCCAGGTaGGAGCTATTGCGGAAACGG +
Preference number: 5 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQRWRAR*ELLRKR
Trigger: CCGTTTCCGCAATAGCTCCAACCTGGCCCGCCATCG...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS-3UTR CAA 90 bp ATTCCTCCTTGTCTGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCACGCCCTTTGGGCTCTTCTaGTTTAAATTCCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: IPPCLGFCFRIPGGVQATPFGLF*FKFLLV
Trigger: GACAAGGAGGAATTTAAACAAGAAGAGCCCAAAGGG...CGTGGCCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CAA 90 bp TGTTTAAATTCCTCCTTGTCTGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGCCAGGCAGCCCCTTaGGGCTCTTCTTGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: CLNSSLSGVLLPNPRGCAGQAAP*GSSCLN
Trigger: ATTTAAACAAGAAGAGCCCAAAGGGGCTGCCTGGCC...TGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CAA 90 bp TTTAAATTCCTCCTTGTCTGGGGTTCTGCTTCCGAATCCCAGGGGGTGTGCAGGTGTTTAAATTCCTCCTaGTCTGGGGTTCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: FKFLLVWGSASESQGVCRCLNSS*SGVLLP
Trigger: CGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA...CCTGCACACCCCCTGGGATTCGGAAGCAGAACCCCAGACAAGGAGGAATTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572548.1
CDS-3UTR CAA 90 bp TACTTCGGGCGTTTTAATTACATAGCTGAGGCCAGAAAGCAATGCCTCGGCCAGTGTTTAAATTCCTCCTaGTCTGGGGTTCTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: YFGRFNYIAEARKQCLGQCLNSS*SGVLLP
Trigger: CGGAAGCAGAACCCCAGACAAGGAGGAATTTAAACA...CTGGCCGAGGCATTGCTTTCTGGCCTCAGCTATGTAATTAAAACGCCCGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252463.6
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp CCGCACTGGGTGCAGTGGTGGGGCCGAGGGCCACCGTaGGTCAGCAGGTGGCGGGCAAGGCTGGCCCGGCGC +
Preference number: 6 (lower is better)
Translates to: PHWVQWWGRGPP*VSRWRARLARR
Trigger: GCGCCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCCCCACCACTGCACCCAGTGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 72 bp GGCGGCTTCTGGTCCTGGGCGTGCGCCAGCAGGTGCTaGACAAGGCTGGCGCGGCGCTGGAAGCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: GGFWSWACASRC*TRLARRWKPRP
Trigger: CGGCCGCGGCTTCCAGCGCCGCGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 72 bp ACACGAAGGGCCTCCGGTCGGAGTCCCGGCGGCGGCTaGCGGAGCCTTCGGAGGACCGGCGGTCCTTGTCCC +
Preference number: 6 (lower is better)
Translates to: TRRASGRSPGGG*RSLRRTGGPCP
Trigger: GGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACTCCGACCGGAGGCCCTTCGTGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp CGCTGCCCCACCCTCTCACCAGCGGCCCCGCGTGGCTaGGCTCCCGGTGGATGCCCTCGAGCAGCAGCACCA +
Preference number: 6 (lower is better)
Translates to: RCPTLSPAAPRG*APGGCPRAAAP
Trigger: TGGTGCTGCTGCTCGAGGGCATCCACCGGGAGCCCAGCCACGCGGGGCCGCTGGTGAGAGGGTGGGGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571903.5
ENST00000577059.1
CDS CAA 90 bp GAGTCCCGGCGGCGGCTGCCGGAGCCTTCGGAGGACCGGCGGTCCTaGTCCCTGGCGTGGATCCGCAGGTGGCGCTTGAGGCTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: ESRRRLPEPSEDRRS*SLAWIRRWRLRLER
Trigger: CCGCTCCAGCCTCAAGCGCCACCTGCGGATCCACGCCAGGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGGCAGCCGCCGCCGGGACTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp CAGTGGTGGGGCCGAGGGCCACCGTGGGTCAGCAGGTaGCGGGCAAGGCTGGCCCGGCGCACAAAGCGCTTC +
Preference number: 6 (lower is better)
Translates to: QWWGRGPPWVSR*RARLARRTKRF
Trigger: GAAGCGCTTTGTGCGCCGGGCCAGCCTTGCCCGCCACCTGCTGACCCACGGTGGCCCTCGGCCCCACCACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CAA 72 bp CGGCGGCTGCCGGAGCCTTCGGAGGACCGGCGGTCCTaGTCCCTGGCGTGGATCCGCAGGTGGCGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: RRLPEPSEDRRS*SLAWIRRWRLR
Trigger: CCTCAAGCGCCACCTGCGGATCCACGCCAGGGACAAGGACCGCCGGTCCTCCGAAGGCTCCGGCAGCCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp TGTGGAGGACCCCGGGTAGGTGGCGCAGGGCGCGGCTaGCGGAAGGCGGGCCAAGCTAGTACAGCGTCTCGC +
Preference number: 6 (lower is better)
Translates to: CGGPRVGGAGRG*RKAGQASTASR
Trigger: GCGAGACGCTGTACTAGCTTGGCCCGCCTTCCGCCAGCCGCGCCCTGCGCCACCTACCCGGGGTCCTCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS GCA 72 bp AGGAAGGAGCGCCCAGCCGGGTGCGAGCGCAGCTGGTaGGCCTTCAGGCGAGACAGCTGCGGGAAGCTCACC +
Preference number: 6 (lower is better)
Translates to: RKERPAGCERSW*AFRRDSCGKLT
Trigger: GGTGAGCTTCCCGCAGCTGTCTCGCCTGAAGGCGCACCAGCTGCGCTCGCACCCGGCTGGGCGCTCCTTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp GCCTTACTCTCAGGAGCGCAGGGCGGCTTCTGGTCCTaGGCGTGCGCCAGCAGGTGCTGCACAAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: ALLSGAQGGFWS*ACASRCCTRLA
Trigger: CGCCAGCCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp CAGCTGGTGAGCCACCTCGGGCCTCAGCCTGGACTCTaGTCGCCTGGGGTCCTCTGGGCTGACAGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QLVSHLGPQPGL*SPGVLWADSLL
Trigger: GAGGAGGCTGTCAGCCCAGAGGACCCCAGGCGACCAGAGTCCAGGCTGAGGCCCGAGGTGGCTCACCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS GCA 72 bp TGCGGGAAGCTCACCCCGCAGTCCGCGCAGATGAACTaGAACTCCGGATTGGGCTCGGGGACGCCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: CGKLTPQSAQMN*NSGLGSGTPSA
Trigger: GGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp GCTTCGGCCTTACTCTCAGGAGCGCAGGGCGGCTTCTaGTCCTGGGCGTGCGCCAGCAGGTGCTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: ASALLSGAQGGF*SWACASRCCTR
Trigger: CCTTGTGCAGCACCTGCTGGCGCACGCCCAGGACCAGAAGCCGCCCTGCGCTCCTGAGAGTAAGGCCGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp GCTCTGGCCGCAGTGGGAGCACAGGACATCGGTCAGTaGCGGCGCTTCGGCCTTACTCTCAGGAGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: ALAAVGAQDIGQ*RRFGLTLRSAG
Trigger: CCCTGCGCTCCTGAGAGTAAGGCCGAAGCGCCGCCACTGACCGATGTCCTGTGCTCCCACTGCGGCCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000575108.5
ENST00000576985.6
CDS TCA 72 bp ACAGCTGCGGGAAGCTCACCCCGCAGTCCGCGCAGATaGACTGCAACTCCGGATTGGGCTCGGGGACGCCCT +
Preference number: 6 (lower is better)
Translates to: TAAGSSPRSPRR*TATPDWARGRP
Trigger: AGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGTGAGCTTCCCGCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CAA 72 bp ACCCCGCAGTCCGCGCAGATGAACTGCAACTCCGGATaGGGCTCGGGGACGCCCTCAGCCACTTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: TPQSAQMNCNSG*GSGTPSATLTS
Trigger: GGAGGTCAAAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCATCTGCGCGGACTGCGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS TCA 72 bp CCCGTGGCCCCATGTCCTCCTGATACTGGAAGCATCTaGACAGCTGGTGAGCCACCTCGGGCCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: PVAPCPPDTGSI*TAGEPPRASAW
Trigger: CCAGGCTGAGGCCCGAGGTGGCTCACCAGCTGTTCAGATGCTTCCAGTATCAGGAGGACATGGGGCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS GCA 72 bp ACGGCAGCTGGGACTGATTCTCCAAGCATCCTTCACTaGGGGGATGCCTCCCTAACGCCAGCCCCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: TAAGTDSPSILH*GDASLTPAPLL
Trigger: CAAGAGCGGGGCTGGCGTTAGGGAGGCATCCCCGCAGTGAAGGATGCTTGGAGAATCAGTCCCAGCTGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000538082.5
ENST00000571903.5
ENST00000572548.1
ENST00000576483.1
ENST00000576985.6
ENST00000577059.1
CDS CCA 72 bp TGGGGACTGCTTTCTTGCAGGGCCTGGAATGTCTTCTaGGGCCCCGGGCTCAGCGGCTGCTTTGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: WGLLSCRAWNVF*GPGLSGCFELG
Trigger: CCCAAGTTCAAAGCAGCCGCTGAGCCCGGGGCCCCAGAAGACATTCCAGGCCCTGCAAGAAAGCAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252463.6
ENST00000571903.5
ENST00000575108.5
ENST00000576985.6
CDS CCA 72 bp CCCAATACGCAGACCCAGAGGAATCGCTTTTCTCACTaGGTAATGGCTCACGAGGGCAGGACAGCCCCCGGT +
Preference number: 6 (lower is better)
Translates to: PNTQTQRNRFSH*VMAHEGRTAPG
Trigger: ACCGGGGGCTGTCCTGCCCTCGTGAGCCATTACCCAGTGAGAAAAGCGATTCCTCTGGGTCTGCGTATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571903.5
CDS TCA 72 bp GAGGTCAGGATATCGAGACCATCCTGGCTAACGCGGTaGAATCCCGTCTCACTCGGAGTCCCCACTACACAG +
Preference number: 6 (lower is better)
Translates to: EVRISRPSWLTR*NPVSLGVPTTQ
Trigger: CTGTGTAGTGGGGACTCCGAGTGAGACGGGATTTCACCGCGTTAGCCAGGATGGTCTCGATATCCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576483.1
CDS CAA 72 bp AACTCCGGATTGGGCTCGGGGACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTGCTGCCAAGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: NSGLGSGTPSAT*TSKISLLPRRD
Trigger: GTCCCTTCTTGGCAGCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6
CDS CAA 90 bp ATGAACTGCAACTCCGGATTGGGCTCGGGGACGCCCTCAGCCACTTaGACCTCCAAAATTTCACTGCTGCCAAGAAGGGACCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: MNCNSGLGSGTPSAT*TSKISLLPRRDPSS
Trigger: TGAAGATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGGTCAAAGTGGCTGAGGGCGTCCCCGAGCCCAATCCGGAGTTGCAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252463.6
ENST00000538082.5
ENST00000571903.5
ENST00000572431.1
ENST00000575108.5
ENST00000576985.6