RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZPR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109917

Ensembl transcript IDs: ENST00000227322.8, ENST00000425791.1, ENST00000429220.5, ENST00000431973.5, ENST00000444935.5, ENST00000449430.1, ENST00000498065.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTACCCCATACACAAGCCTGCCTTGGCTTCTCGTCCAATTTGGTaGATCTCACACTACACAGCCCTGCCCCACCCTGGTGTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: GYPIHKPALASRPIW*ISHYTALPHPGVSR
Trigger: CCTGCTGACACCAGGGTGGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp CCAGGGTACCCCATACACAAGCCTGCCTTGGCTTCTCGTCCAATTTaGTGCATCTCACACTACACAGCCCTGCCCCACCCTGGTGTCAGC +
Preference number: 1 (lower is better)
Translates to: PGYPIHKPALASRPI*CISHYTALPHPGVS
Trigger: GCTGACACCAGGGTGGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp TCACTAGGCGGAGGGCCCCAGGGTACCCCATACACAAGCCTGCCTTaGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGC +
Preference number: 1 (lower is better)
Translates to: SLGGGPQGTPYTSLP*LLVQFGASHTTQPC
Trigger: GCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGGGCCCTCCGCCTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 90 bp GTCTCCACCCTGTGCTGCAGGGCAGTTAAGCAGGATCAGATGCCGTaGCAATGGCCTGCTCTGAGCTTTGGCCTCTCTCTGCAGTTGTAT +
Preference number: 1 (lower is better)
Translates to: VSTLCCRAVKQDQMP*QWPALSFGLSLQLY
Trigger: ATACAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCATTGGCACGGCATCTGATCCTGCTTAACTGCCCTGCAGCACAGGGTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 90 bp TGCCCCACCCTGGTGTCAGCAGGCATTCAGAAAGCCTCACACTTCTaGTCCAGTGAACACTGCCAGGATAGCCCTCTGAACTTCCACCCA +
Preference number: 1 (lower is better)
Translates to: CPTLVSAGIQKASHF*SSEHCQDSPLNFHP
Trigger: TGGGTGGAAGTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCAGAAGTGTGAGGCTTTCTGAATGCCTGCTGACACCAGGGTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 90 bp TGTCTTCAATTCCACTGCTACCCATCCTACCCCAGTCCCTTAGCCTaGCAAGGCCCAAGTGTCTCCACCCTGTGCTGCAGGGCAGTTAAG +
Preference number: 1 (lower is better)
Translates to: CLQFHCYPSYPSPLA*QGPSVSTLCCRAVK
Trigger: CTTAACTGCCCTGCAGCACAGGGTGGAGACACTTGGGCCTTGTCAGGCTAAGGGACTGGGGTAGGATGGGTAGCAGTGGAATTGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp TCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGCCCCACCCTaGTGTCAGCAGGCATTCAGAAAGCCTCACACTTCTGCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: SSNLVHLTLHSPAPP*CQQAFRKPHTSAPV
Trigger: CACTGGAGCAGAAGTGTGAGGCTTTCTGAATGCCTGCTGACACCAGGGTGGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp GAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTaGTCCTTAACTTTCAGAAGAACTGCAGAGAGCCTCCTTTCTCTC +
Preference number: 1 (lower is better)
Translates to: EHWLGSPGPKQQSVH*SLTFRRTAESLLSL
Trigger: GAGAGAAAGGAGGCTCTCTGCAGTTCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CCA 90 bp CACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCC +
Preference number: 1 (lower is better)
Translates to: HLLFMRGRRLQCKEH*LGSPGPKQQSVHWS
Trigger: GGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CCA 90 bp ACCCTGTGCTGCAGGGCAGTTAAGCAGGATCAGATGCCGTGCCAATaGCCTGCTCTGAGCTTTGGCCTCTCTCTGCAGTTGTATCTAATA +
Preference number: 1 (lower is better)
Translates to: TLCCRAVKQDQMPCQ*PALSFGLSLQLYLI
Trigger: TATTAGATACAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCATTGGCACGGCATCTGATCCTGCTTAACTGCCCTGCAGCACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 90 bp CTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTaGCCTCCTCCTCAGCTTTGCCCAAATGTCAAATTATCACCTTCT +
Preference number: 1 (lower is better)
Translates to: LPGNLFPQIPTQLTP*PPPQLCPNVKLSPS
Trigger: AGAAGGTGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR TCA 90 bp AAGCCTCACACTTCTGCTCCAGTGAACACTGCCAGGATAGCCCTCTaGACTTCCACCCACCCATCTTCTGCCCATTTGTTTTCTTTGTCT +
Preference number: 1 (lower is better)
Translates to: KPHTSAPVNTARIAL*TSTHPSSAHLFSLS
Trigger: AGACAAAGAAAACAAATGGGCAGAAGATGGGTGGGTGGAAGTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCAGAAGTGTGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 90 bp AACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATaGGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGAAGTC +
Preference number: 1 (lower is better)
Translates to: NKYPAVCTTGVTFCL*EAGDYSAKNTGWEV
Trigger: GACTTCCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR TCA 90 bp TCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTaGCCCATGAAAGTAGGAGGCGTGCCCTCATGCATGAACCACTTT +
Preference number: 1 (lower is better)
Translates to: SSTRLMTEHGCISHT*PMKVGGVPSCMNHF
Trigger: AAAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp TTGTCATCAAAGGGCAGGAAGTACCTTAGCTGGGTTATCCCAGTCTaGCACCTGGTCCTCAGTCTTCAAGTTCAGAAACTCAGGTCATCA +
Preference number: 1 (lower is better)
Translates to: LSSKGRKYLSWVIPV*HLVLSLQVQKLRSS
Trigger: TGATGACCTGAGTTTCTGAACTTGAAGACTGAGGACCAGGTGCCAGACTGGGATAACCCAGCTAAGGTACTTCCTGCCCTTTGATGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp AAACTGAAGAATGCCTTGTCATCAAAGGGCAGGAAGTACCTTAGCTaGGTTATCCCAGTCTGGCACCTGGTCCTCAGTCTTCAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: KLKNALSSKGRKYLS*VIPVWHLVLSLQVQ
Trigger: CTGAACTTGAAGACTGAGGACCAGGTGCCAGACTGGGATAACCCAGCTAAGGTACTTCCTGCCCTTTGATGACAAGGCATTCTTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp TCAGTACCTACCTGTATGTTCGTCCACACGTCTAATGACCGAACATaGCTGCATTTCACATACTTGACCCATGAAAGTAGGAGGCGTGCC +
Preference number: 1 (lower is better)
Translates to: SVPTCMFVHTSNDRT*LHFTYLTHESRRRA
Trigger: GGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACATACAGGTAGGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp GGAGCTGAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTaGCATGGGTTTGACACCTGCCTCTTAGAAGCTCTACTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: GAELKIFRPQVSESD*HGFDTCLLEALLLA
Trigger: GGCCAGAAGTAGAGCTTCTAAGAGGCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 90 bp ATGAAAGTGTTGCCATCATTAAAGTTTTCAGTTGGCCAAGTCAACTaGCCTTCATACTTGCTCCCAACACTCACCTCCCCTCCTCCACTC +
Preference number: 1 (lower is better)
Translates to: MKVLPSLKFSVGQVN*PSYLLPTLTSPPPL
Trigger: GAGTGGAGGAGGGGAGGTGAGTGTTGGGAGCAAGTATGAAGGGCAGTTGACTTGGCCAACTGAAAACTTTAATGATGGCAACACTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 90 bp GTCTTAGCCACCACTGCCCTAAATGTAAGCAGAGACACCATTTTCTaGAGTGTGCATCAGGCACATACCACAGGTGTACAAAGAAGGAAA +
Preference number: 1 (lower is better)
Translates to: VLATTALNVSRDTIF*SVHQAHTTGVQRRK
Trigger: TTTCCTTCTTTGTACACCTGTGGTATGTGCCTGATGCACACTGCAGAAAATGGTGTCTCTGCTTACATTTAGGGCAGTGGTGGCTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp CACTTAAATGTTACTCATGGCTGTGAAACTGAATCCACATGTTCCTaGCACTTTGACTCACCTACCCTGGCCTTAAAGCGAGACCCTTTC +
Preference number: 1 (lower is better)
Translates to: HLNVTHGCETESTCS*HFDSPTLALKRDPF
Trigger: GAAAGGGTCTCGCTTTAAGGCCAGGGTAGGTGAGTCAAAGTGCCAGGAACATGTGGATTCAGTTTCACAGCCATGAGTAACATTTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 90 bp CTGGATGAATGTGTTTCAACATTTCTAACTGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGCTCTAACCTCACAGCTCTAGCATTT +
Preference number: 1 (lower is better)
Translates to: LDECVSTFLTESRAN*SGTPTGSNLTALAF
Trigger: AAATGCTAGAGCTGTGAGGTTAGAGCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTCAGTTAGAAATGTTGAAACACATTCATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR GCA 90 bp GATAACATCTTAATCAATGAACTGGTCTTTATTGAACAAATACCCTaGAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: DNILINELVFIEQIP*SLHHRSHLLFMRGR
Trigger: CCTGCCTCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAATAAAGACCAGTTCATTGATTAAGATGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 90 bp ACACCTTACTCTCGCCCTCACTTACAGAAATTAGAGATACAGGTATaGAAGTTAGTCCCACATGATAGTAAGATGCCAAAGAATCTGATA +
Preference number: 1 (lower is better)
Translates to: TPYSRPHLQKLEIQV*KLVPHDSKMPKNLI
Trigger: TATCAGATTCTTTGGCATCTTACTATCATGTGGGACTAACTTCCATACCTGTATCTCTAATTTCTGTAAGTGAGGGCGAGAGTAAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 90 bp CCCAGGGTACCCCATACACAAGCCTGCCTTGGCTTCTCGTCCAATTaGGTGCATCTCACACTACACAGCCCTGCCCCACCCTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: PRVPHTQACLGFSSN*VHLTLHSPAPPWCQ
Trigger: CTGACACCAGGGTGGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 90 bp TTCACTAGGCGGAGGGCCCCAGGGTACCCCATACACAAGCCTGCCTaGGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: FTRRRAPGYPIHKPA*ASRPIWCISHYTAL
Trigger: CAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGGGCCCTCCGCCTAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCAGCAGCGCTGGAGGCTaGCCCTTGAGCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFSSAGG*PLSHPL
Trigger: CAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCT...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTAGCAGCGCTGGAGGCTaGCCCTTGAGCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFSSAGG*PLSHPL
Trigger: CAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCT...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAACAGAAAGAGCAGCGCTaGAGGCTGGCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQQKEQR*RLALEP
Trigger: TGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTG...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTCAGAAAGAGCAGCGCTaGAGGCTGGCCCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIQKEQR*RLALEP
Trigger: TGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTG...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp CTGCCTTGGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGCCCCCACAGCTCTAGCATTTaGAGTTCCCTCTGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: LPWLLVQFGASHTTQPCPHSSSI*SSLCQE
Trigger: TTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTG...GGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp CTGCCTTGGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGCCCCGAATCCACATGTTCCTaGCACTTTGACTCACCTACC +
Preference number: 2 (lower is better)
Translates to: LPWLLVQFGASHTTQPCPESTCS*HFDSPT
Trigger: GGTAGGTGAGTCAAAGTGCCAGGAACATGTGGATTC...GGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR TCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGATTTGCAGTTCCCTCTaGCAGGAAATCTCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKICSSL*QEISSP
Trigger: GGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAAT...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACCCTCCTCCTCAGCTTTaGCCAAATGTCAAATTATCA +
Preference number: 2 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHPPPQL*PNVKLS
Trigger: TGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGG...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAAGCAGCGCTGGAGGCTaGCCCTTGAGCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTSSAGG*PLSHPL
Trigger: CAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCT...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCCTCCTTCACTTGTGCTaGACTCGGTCTCCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTLLHLC*TRSPLR
Trigger: CCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAG...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCCAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIQCKEH*LGSPGP
Trigger: GGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 90 bp CCCCCAGATACCCACACAGCTCACTCCCTGACCTCCTCCTCAGCTTaGCCCAAATGTCAAATTATCACCTTCTTGTTCAGAAGATCTTCC +
Preference number: 2 (lower is better)
Translates to: PPDTHTAHSLTSSSA*PKCQIITFLFRRSS
Trigger: GGAAGATCTTCTGAACAAGAAGGTGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGTCAGGGAGTGAGCTGTGTGGGTATCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR TCA 90 bp TTCACATACTTGACCCATGAAAGTAGGAGGCGTGCCCTCATGCATGAACCACTTGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: FTYLTHESRRRALMHEPLVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...AAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 90 bp TTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTaGACCCATGAAAGTAGGAGGCGTGCCCTCATGCATGAACCACTT +
Preference number: 2 (lower is better)
Translates to: FVHTSNDRTWLHFTY*THESRRRALMHEPL
Trigger: AAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR TCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGAGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGC +
Preference number: 2 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRESRAN*SGTPTG
Trigger: GCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTC...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGATTTGCAGTTCCCTCTaGCAGGAAATCTCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: SPFVYERQETTVQRTLAGICSSL*QEISSP
Trigger: GGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAAT...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp TTCACATACTTGACCCATGAAAGTAGGAGGCGTGCCCTCATGCATGAACCACTTTTCCTAGGAACTGGGTaGATTCTGGGAGATTGCCTC +
Preference number: 2 (lower is better)
Translates to: FTYLTHESRRRALMHEPLFLGTG*ILGDCL
Trigger: GAGGCAATCTCCCAGAATCCACCCAGTTCCTAGGAA...AAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR TCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCGAGGCCAGTGCTGTTTaGAAGTCATCATTTCAATGG +
Preference number: 2 (lower is better)
Translates to: SLHNPAPFPALHSSMTLIEASAV*KSSFQW
Trigger: CCATTGAAATGATGACTTTCAAACAGCACTGGCCTC...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR TCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTACACTAATCACCATCTaGTGTACTGTTTTCCTGATC +
Preference number: 2 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTTLITI*CTVFLI
Trigger: GATCAGGAAAACAGTACATCAGATGGTGATTAGTGT...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCACCTCCTCCTCAGCTTTaGCCAAATGTCAAATTATCA +
Preference number: 2 (lower is better)
Translates to: NLTALAFAVPSARKSLPPPPPQL*PNVKLS
Trigger: TGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGG...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACACAAAAGAAATTAGCTaGGTGTGGCGGCGTGCGCCT +
Preference number: 2 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDTKEIS*VWRRAP
Trigger: AGGCGCACGCCGCCACACCCAGCTAATTTCTTTTGT...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCGAACTGGGTGGATTCTaGGAGATTGCCTCACACCAA +
Preference number: 2 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTELGGF*EIASHQ
Trigger: TTGGTGTGAGGCAATCTCCCAGAATCCACCCAGTTC...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCGTTTCAGAGTCTGACTaGCATGGGTTTGACACCTGC +
Preference number: 2 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIVSESD*HGFDTC
Trigger: GCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAAC...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 90 bp ATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTaGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACA +
Preference number: 2 (lower is better)
Translates to: IITFLFRRSSLLPIS*HNPAPFPALHSSMT
Trigger: TGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CAA 90 bp CTGACCTCCTCCTCAGCTTTGCCCAAATGTCAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCA +
Preference number: 2 (lower is better)
Translates to: LTSSSALPKCQIITF*FRRSSLLPISLHNP
Trigger: TGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR TCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACACTAATCACCATCTaGTGTACTGTTTTCCTGATC +
Preference number: 2 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFTLITI*CTVFLI
Trigger: GATCAGGAAAACAGTACATCAGATGGTGATTAGTGT...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp GTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCGAATTAAATGCCAGCTaGAATCCCCAAATTACAGTA +
Preference number: 2 (lower is better)
Translates to: VQKIFPTPHFLAQPSPIPELNAS*NPQITV
Trigger: TACTGTAATTTGGGGATTGCAGCTGGCATTTAATTC...GGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 2 (lower is better)
Translates to: NLTALAFAVPSARKSLPPVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 2 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CAA 90 bp TTTATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTaGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTG +
Preference number: 2 (lower is better)
Translates to: FIEQIPCSLHHRSHL*FMRGRRLQCKEHWL
Trigger: CAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR TCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 2 (lower is better)
Translates to: RRLNSNSMISNKDRVNTEVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR TCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCGGCAGGAGAATTGCTTaGACCCAGGAGGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: FILCRGFRALPELSHLTLGRRIA*TQEARL
Trigger: CAGCCTTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR GCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTGAATTAAATGCCAGCTaGAATCCCCAAATTACAGTA +
Preference number: 2 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFELNAS*NPQITV
Trigger: TACTGTAATTTGGGGATTGCAGCTGGCATTTAATTC...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR GCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCATTGAACAAATACCCTaGAGTCTGCACCACAGGAGT +
Preference number: 2 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTIEQIP*SLHHRS
Trigger: ACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR GCA 90 bp ATGGCCTGCTCTGAGCTTTGGCCTCTCTCTGCAGTTGTATCTAATAGAACAAATCCATTTTCTGCAGTGTaGATCAGGCACATACCACAG +
Preference number: 2 (lower is better)
Translates to: MACSELWPLSAVVSNRTNPFSAV*IRHIPQ
Trigger: CTGTGGTATGTGCCTGATGCACACTGCAGAAAATGG...ATTTGTTCTATTAGATACAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCAATACAAAAATTAGCTaGGTGCAGTGGTGGGCGTCT +
Preference number: 2 (lower is better)
Translates to: RLAKWGARGHPNFLKYQINTKIS*VQWWAS
Trigger: AGACGCCCACCACTGCACCCAGCTAATTTTTGTATT...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCAAAGTGAGGGATTTCTaGAAAACGGAGTTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLKVRDF*KTELRK
Trigger: TTTCCTTAACTCCGTTTTCCAGAAATCCCTCACTTT...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449430.1
3UTR-3UTR TCA 90 bp AGAGGGTTGTCTGGTAAACTTAGATTCCCAAGTCAGCTGGAAACATACCTAGAGGAGGCCAGTGCTGTTTaGAAGTCATCATTTCAATGG +
Preference number: 2 (lower is better)
Translates to: RGLSGKLRFPSQLETYLEEASAV*KSSFQW
Trigger: CCATTGAAATGATGACTTTCAAACAGCACTGGCCTC...CTCTAGGTATGTTTCCAGCTGACTTGGGAATCTAAGTTTACCAGACAACCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACAATACAGAGGCCAGTaGTGTTTGAAAGTCATCATT +
Preference number: 2 (lower is better)
Translates to: PQESPFVYERQETTVQRTQYRGQ*CLKVII
Trigger: AATGATGACTTTCAAACAGCACTGGCCTCTGTATTG...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 2 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR GCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCTGTCTTCAATTCCACTaGTACCCATCCTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: FILCRGFRALPELSHLTLCLQFH*YPSYPS
Trigger: ACTGGGGTAGGATGGGTAGCAGTGGAATTGAAGACA...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp TGGGGAAGTCTACTTAAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACAGGGTTAAGAAGAGATaGTCCACTATCAAATGTGAC +
Preference number: 2 (lower is better)
Translates to: WGSLLKRPNDRSEGCLVNRVKKR*STIKCD
Trigger: GTCACATTTGATAGTGGACCATCTCTTCTTAACCCT...GTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTTAAGTAGACTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCATATGCTGGGTGCTGTaGAGCAAGACTCAGTTAACT +
Preference number: 2 (lower is better)
Translates to: FILCRGFRALPELSHLTLICWVL*SKTQLT
Trigger: AGTTAACTGAGTCTTGCTCCACAGCACCCAGCATAT...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 72 bp GGGGCTCTGAGGGCTTGTGAGACGAGGACGCTGGGCTaGGAAGATAGGGCTTCACTAGGCGGAGGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: GALRACETRTLG*EDRASLGGGPQ
Trigger: CTGGGGCCCTCCGCCTAGTGAAGCCCTATCTTCTCAGCCCAGCGTCCTCGTCTCACAAGCCCTCAGAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp TGCAGGGCAGTTAAGCAGGATCAGATGCCGTGCCAATaGCCTGCTCTGAGCTTTGGCCTCTCTCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: CRAVKQDQMPCQ*PALSFGLSLQL
Trigger: CAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCATTGGCACGGCATCTGATCCTGCTTAACTGCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp GGAGGGCCCCAGGGTACCCCATACACAAGCCTGCCTTaGCTTCTCGTCCAATTTGGTGCATCTCACACTACA +
Preference number: 3 (lower is better)
Translates to: GGPQGTPYTSLP*LLVQFGASHTT
Trigger: TGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 72 bp CAGGTTTCAGAGTCTGACTGGCATGGGTTTGACACCTaGCTCTTAGAAGCTCTACTTCTGGCCAGGCACGGT +
Preference number: 3 (lower is better)
Translates to: QVSESDWHGFDT*LLEALLLARHG
Trigger: ACCGTGCCTGGCCAGAAGTAGAGCTTCTAAGAGGCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 72 bp CTGGTGTCAGCAGGCATTCAGAAAGCCTCACACTTCTaGTCCAGTGAACACTGCCAGGATAGCCCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LVSAGIQKASHF*SSEHCQDSPLN
Trigger: GTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCAGAAGTGTGAGGCTTTCTGAATGCCTGCTGACACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp CTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTaGTCCTTAACTTTCAGAAGAACTGCAGAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: LGSPGPKQQSVH*SLTFRRTAESL
Trigger: GAGGCTCTCTGCAGTTCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CCA 72 bp TTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTT +
Preference number: 3 (lower is better)
Translates to: FMRGRRLQCKEH*LGSPGPKQQSV
Trigger: AACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR TCA 72 bp ACTTCTGCTCCAGTGAACACTGCCAGGATAGCCCTCTaGACTTCCACCCACCCATCTTCTGCCCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: TSAPVNTARIAL*TSTHPSSAHLF
Trigger: AAACAAATGGGCAGAAGATGGGTGGGTGGAAGTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp AAGGGCAGGAAGTACCTTAGCTGGGTTATCCCAGTCTaGCACCTGGTCCTCAGTCTTCAAGTTCAGAAACTC +
Preference number: 3 (lower is better)
Translates to: KGRKYLSWVIPV*HLVLSLQVQKL
Trigger: GAGTTTCTGAACTTGAAGACTGAGGACCAGGTGCCAGACTGGGATAACCCAGCTAAGGTACTTCCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp AATGCCTTGTCATCAAAGGGCAGGAAGTACCTTAGCTaGGTTATCCCAGTCTGGCACCTGGTCCTCAGTCTT +
Preference number: 3 (lower is better)
Translates to: NALSSKGRKYLS*VIPVWHLVLSL
Trigger: AAGACTGAGGACCAGGTGCCAGACTGGGATAACCCAGCTAAGGTACTTCCTGCCCTTTGATGACAAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 72 bp ACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTaGTTTACATTCCTCCATGACACTAATCACCATCTG +
Preference number: 3 (lower is better)
Translates to: TPHFLAQPSPIP*FTFLHDTNHHL
Trigger: CAGATGGTGATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CCA 72 bp GGAAGTACCTTAGCTGGGTTATCCCAGTCTGGCACCTaGTCCTCAGTCTTCAAGTTCAGAAACTCAGGTCAT +
Preference number: 3 (lower is better)
Translates to: GSTLAGLSQSGT*SSVFKFRNSGH
Trigger: ATGACCTGAGTTTCTGAACTTGAAGACTGAGGACCAGGTGCCAGACTGGGATAACCCAGCTAAGGTACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp GTTACTCATGGCTGTGAAACTGAATCCACATGTTCCTaGCACTTTGACTCACCTACCCTGGCCTTAAAGCGA +
Preference number: 3 (lower is better)
Translates to: VTHGCETESTCS*HFDSPTLALKR
Trigger: TCGCTTTAAGGCCAGGGTAGGTGAGTCAAAGTGCCAGGAACATGTGGATTCAGTTTCACAGCCATGAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CAA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCAGAGGCCAGTGCTGTTaGAAAGTCATCATTTCAATG +
Preference number: 3 (lower is better)
Translates to: SLHNPAPFPALHSSMTLIRGQCC*KVIISM
Trigger: CATTGAAATGATGACTTTCAAACAGCACTGGCCTCT...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CAA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACGTGGATTCTGGGAGATaGCCTCACACCAACCAAACT +
Preference number: 3 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDVDSGR*PHTNQT
Trigger: AGTTTGGTTGGTGTGAGGCAATCTCCCAGAATCCAC...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR TCA 72 bp TGTGTTTCAACATTTCTAACTGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGCTCTAACCTCACAGCT +
Preference number: 3 (lower is better)
Translates to: CVSTFLTESRAN*SGTPTGSNLTA
Trigger: AGCTGTGAGGTTAGAGCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTCAGTTAGAAATGTTGAAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR GCA 72 bp TTGCCATCATTAAAGTTTTCAGTTGGCCAAGTCAACTaGCCTTCATACTTGCTCCCAACACTCACCTCCCCT +
Preference number: 3 (lower is better)
Translates to: LPSLKFSVGQVN*PSYLLPTLTSP
Trigger: AGGGGAGGTGAGTGTTGGGAGCAAGTATGAAGGGCAGTTGACTTGGCCAACTGAAAACTTTAATGATGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 72 bp ACCACTGCCCTAAATGTAAGCAGAGACACCATTTTCTaGAGTGTGCATCAGGCACATACCACAGGTGTACAA +
Preference number: 3 (lower is better)
Translates to: TTALNVSRDTIF*SVHQAHTTGVQ
Trigger: TTGTACACCTGTGGTATGTGCCTGATGCACACTGCAGAAAATGGTGTCTCTGCTTACATTTAGGGCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp ACCTGTATGTTCGTCCACACGTCTAATGACCGAACATaGCTGCATTTCACATACTTGACCCATGAAAGTAGG +
Preference number: 3 (lower is better)
Translates to: TCMFVHTSNDRT*LHFTYLTHESR
Trigger: CCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACATACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CAA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACACCTCCTCCTCAGCTTaGCCCAAATGTCAAATTATC +
Preference number: 3 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDTSSSA*PKCQII
Trigger: GATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGT...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp CTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTaGCATGGGTTTGACACCTGCCTCTTAGAAGCTCTA +
Preference number: 3 (lower is better)
Translates to: LKIFRPQVSESD*HGFDTCLLEAL
Trigger: TAGAGCTTCTAAGAGGCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CAA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: PQESPFVYERQETTVQRTQIITF*FRRSSL
Trigger: TAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTG...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR GCA 72 bp TTAATAGGAATAAAGCCAAGTAGTCTTAGCCACCACTaGCCTAAATGTAAGCAGAGACACCATTTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: LIGIKPSSLSHH*PKCKQRHHFLQ
Trigger: CTGCAGAAAATGGTGTCTCTGCTTACATTTAGGGCAGTGGTGGCTAAGACTACTTGGCTTTATTCCTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CCA 72 bp TCTCGCCCTCACTTACAGAAATTAGAGATACAGGTATaGAAGTTAGTCCCACATGATAGTAAGATGCCAAAG +
Preference number: 3 (lower is better)
Translates to: SRPHLQKLEIQV*KLVPHDSKMPK
Trigger: CTTTGGCATCTTACTATCATGTGGGACTAACTTCCATACCTGTATCTCTAATTTCTGTAAGTGAGGGCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR GCA 72 bp TTAATCAATGAACTGGTCTTTATTGAACAAATACCCTaGAGTCTGCACCACAGGAGTCACCTTTTGTTTATG +
Preference number: 3 (lower is better)
Translates to: LINELVFIEQIP*SLHHRSHLLFM
Trigger: CATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAATAAAGACCAGTTCATTGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR-3UTR CAA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCGGCCTCTCTCTGCAGTaGTATCTAATAGAACAAATA +
Preference number: 3 (lower is better)
Translates to: FILCRGFRALPELSHLTLGLSLQ*YLIEQI
Trigger: TATTTGTTCTATTAGATACAACTGCAGAGAGAGGCC...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR-3UTR CAA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCCAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: FILCRGFRALPELSHLTLQIITF*FRRSSL
Trigger: TAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTG...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACCCCCGCTGGCCGCCATaGCCACCACGCGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDPRWPP*PPRAIQ
Trigger: CTGAATTGCGCGTGGTGGCCATGGCGGCCAGCGGGG...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGATGGGCCGGAACAGGTaGTCAGGGGCAGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKMGRNR*SGAGGG
Trigger: CCCGCCGCCTGCCCCTGATCACCTGTTCCGGCCCAT...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTATGGGCCGGAACAGGTaGTCAGGGGCAGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTMGRNR*SGAGGG
Trigger: CCCGCCGCCTGCCCCTGATCACCTGTTCCGGCCCAT...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTCGATCTCGGTGGGCTaGTGCTCCTCGTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHSISVG*CSSSSA
Trigger: CGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGA...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp AGCACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCATGGGCCGGAACAGGTaGTCAGGGGCAGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: STGDQSFNSGQSSFLAKGMGRNR*SGAGGG
Trigger: CCCGCCGCCTGCCCCTGATCACCTGTTCCGGCCCAT...GCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425791.1
CDS-3UTR CCA 90 bp AGCACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCCCCCGCTGGCCGCCATaGCCACCACGCGCAATTCAG +
Preference number: 4 (lower is better)
Translates to: STGDQSFNSGQSSFLAKGPRWPP*PPRAIQ
Trigger: CTGAATTGCGCGTGGTGGCCATGGCGGCCAGCGGGG...GCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425791.1
CDS-3UTR CCA 90 bp GTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCAGCAGCGCTGGAGGCTaGCCCTTGAGCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: VQKIFPTPHFLAQPSPIPSSAGG*PLSHPL
Trigger: CAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCT...GGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACCAGAAAGAGCAGCGCTaGAGGCTGGCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDQKEQR*RLALEP
Trigger: TGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTG...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACCAGAAAGAGCAGCGCTaGAGGCTGGCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHQKEQR*RLALEP
Trigger: TGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTG...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCGCCCTTCCAGTGTGGTaGACTTGCCCCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: VQKIFPTPHFLAQPSPIPALPVW*TCPRGL
Trigger: CAGTCCTCGGGGGCAAGTTCACCACACTGGAAGGGC...GGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACACACAGCTCACTCCCTaGCCTCCTCCTCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHTQLTP*PPPQLC
Trigger: GCAAAGCTGAGGAGGAGGTCAGGGAGTGAGCTGTGT...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AGCACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCTCGATCTCGGTGGGCTaGTGCTCCTCGTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: STGDQSFNSGQSSFLAKGSISVG*CSSSSA
Trigger: CGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGA...GCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR GCA 90 bp ACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCAGGTCGATCTCGGTGGGCTaGTGCTCCTCGTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: TGDQSFNSGQSSFLAKGRSISVG*CSSSSA
Trigger: CGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGA...CCTGCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR CCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACCTCCTTCACTTGTGCTaGACTCGGTCTCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDLLHLC*TRSPLR
Trigger: CCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAG...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CAA 72 bp CGGAGGGCCCCAGGGTACCCCATACACAAGCCTGCCTaGGCTTCTCGTCCAATTTGGTGCATCTCACACTAC +
Preference number: 4 (lower is better)
Translates to: RRAPGYPIHKPA*ASRPIWCISHY
Trigger: GTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGGTACCCTGGGGCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCGCCCTTCCAGTGTGGTaGACTTGCCCCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLALPVW*TCPRGL
Trigger: CAGTCCTCGGGGGCAAGTTCACCACACTGGAAGGGC...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR TCA 90 bp GTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCGCCAATGGCCTGCTCTaGGCTTTGGCCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQKIFPTPHFLAQPSPIPANGLL*ALASLC
Trigger: GCAGAGAGAGGCCAAAGCTCAGAGCAGGCCATTGGC...GGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAAGCAGGCTGGGGCTCTaGGGGCTTGTGAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPSRLGL*GLVRRG
Trigger: TCCTCGTCTCACAAGCCCTCAGAGCCCCAGCCTGCT...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp AGAGGGTTGTCTGGTAAACTTAGATTCCCAAGTCAGCTGGAAACATACCTAGAGATGGGCCGGAACAGGTaGTCAGGGGCAGGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGLSGKLRFPSQLETYLEMGRNR*SGAGGG
Trigger: CCCGCCGCCTGCCCCTGATCACCTGTTCCGGCCCAT...CTCTAGGTATGTTTCCAGCTGACTTGGGAATCTAAGTTTACCAGACAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQESRAN*SGTPTG
Trigger: GCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTC...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCCCAGTCCCTTAGCCTaGCAAGGCCCAAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSPSPLA*QGPSVS
Trigger: GGAGACACTTGGGCCTTGTCAGGCTAAGGGACTGGG...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAGCCAGGATAGCCCTCTaGACTTCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQARIAL*TSTHPS
Trigger: AGATGGGTGGGTGGAAGTTCAGAGGGCTATCCTGGC...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACCTTGCCCCCGAGGACTaGCATTCCCAGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHLAPED*HSQFKF
Trigger: GAATTTGAACTGGGAATGGCAGTCCTCGGGGGCAAG...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACTGCTCCAGTGAACACTaGCAGGATAGCCCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDCSSEH*QDSPLN
Trigger: GTTCAGAGGGCTATCCTGGCAGTGTTCACTGGAGCA...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCACACAGCTCACTCCCTaGCCTCCTCCTCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFTQLTP*PPPQLC
Trigger: GCAAAGCTGAGGAGGAGGTCAGGGAGTGAGCTGTGT...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACAGGCTCTGAGGGCTTGTaGGACGAGGACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTGSEGL*DEDAGL
Trigger: CAGCCCAGCGTCCTCGTCTCACAAGCCCTCAGAGCC...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACTGTAGCATCTTTGTTTaGCCTTCGTGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDCSIFV*PSCRLV
Trigger: GACCAGCCTGCACGAAGGGCAAACAAAGATGCTACA...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTTCTGAGCGGGGGCATTaGATTCTGGGCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTSERGH*ILGSLC
Trigger: GCACAAACTGCCCAGAATGCAATGCCCCCGCTCAGA...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTCCAAGGCTGGCGGATTaGCTGAGCTCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFPRLAD*LSSGVR
Trigger: TCGAACTCCTGAGCTCAGGCAATCCGCCAGCCTTGG...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACGTTGGCCAAGTCAACTaGCCTTCATACTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHVGQVN*PSYLLP
Trigger: TGGGAGCAAGTATGAAGGGCAGTTGACTTGGCCAAC...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCACTCCTTCACTTGTGCTaGACTCGGTCTCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPLLHLC*TRSPLR
Trigger: CCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAG...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTCCTTCACTTGTGCTaGACTCGGTCTCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSLLHLC*TRSPLR
Trigger: CCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAG...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACACAGCTCACTCCCTaGCCTCCTCCTCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IISMVTPSLVLDSVSPQETQLTP*PPPQLC
Trigger: GCAAAGCTGAGGAGGAGGTCAGGGAGTGAGCTGTGT...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGAACTGGAGCACTTaGAGCCCCAGCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSLNWST*SPSISS
Trigger: GGAAGAGATGCTGGGGCTTCAAGTGCTCCAGTTCAG...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429220.5
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACTGCAGTAACAGTTCATaGATAGCGACTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDCSNSS*IATRSR
Trigger: CCGAGATCGAGTCGCTATGCATGAACTGTTACTGCA...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAGCAGGAGGCGCGTCATaGCATTGCAGTAACAGTTCA +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQAGGAS*HCSNSS
Trigger: TGAACTGTTACTGCAATGGCATGACGCGCCTCCTGC...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTTTTGTTTGCCCTTCGTaGAGGCTGGTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFFVCPS*RLVLLQ
Trigger: CTGGAGCAGGACCAGCCTGCACGAAGGGCAAACAAA...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCAGGTTTGTTTGCCCTTCGTaGAGGCTGGTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TGDQSFNSGQSSFLAKGRFVCPS*RLVLLQ
Trigger: CTGGAGCAGGACCAGCCTGCACGAAGGGCAAACAAA...CCTGCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTCTGAGCGGGGGCATTaGATTCTGGGCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSISERGH*ILGSLC
Trigger: GCACAAACTGCCCAGAATGCAATGCCCCCGCTCAGA...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCTCTGAGCGGGGGCATTaGATTCTGGGCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLSERGH*ILGSLC
Trigger: GCACAAACTGCCCAGAATGCAATGCCCCCGCTCAGA...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACCATTTTGGTCAAAGGTaGGCTTGTAACGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDHFGQR*ACNAPP
Trigger: AGGTGGAGCGTTACAAGCGCACCTTTGACCAAAATG...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCCAAGATCACGCCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSPRSRH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGCGTGATCTTGG...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGCAGGATCAGATGCCGTaGCAATGGCCTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: IISMVTPSLVLDSVSPQEQDQMP*QWPALS
Trigger: GCTCAGAGCAGGCCATTGGCACGGCATCTGATCCTG...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTTTAAGCAGGATCAGATaGCGTGCCAATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTLSRIR*RANGLL
Trigger: GAGCAGGCCATTGGCACGGCATCTGATCCTGCTTAA...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACTGTCTTCAATTCCACTaGTACCCATCCTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDCLQFH*YPSYPS
Trigger: ACTGGGGTAGGATGGGTAGCAGTGGAATTGAAGACA...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAACAAAAGAAATTAGCTaGGTGTGGCGGCGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQTKEIS*VWRRAP
Trigger: AGGCGCACGCCGCCACACCCAGCTAATTTCTTTTGT...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp CTGCCTTGGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGCCCCGAGGCCAGTGCTGTTTaGAAGTCATCATTTCAATGG +
Preference number: 4 (lower is better)
Translates to: LPWLLVQFGASHTTQPCPEASAV*KSSFQW
Trigger: CCATTGAAATGATGACTTTCAAACAGCACTGGCCTC...GGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SPFVYERQETTVQRTLAGESRAN*SGTPTG
Trigger: GCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTC...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCTTTGTTTGCCCTTCGTaGAGGCTGGTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLHNPAPFPALHSSMTLIFVCPS*RLVLLQ
Trigger: CTGGAGCAGGACCAGCCTGCACGAAGGGCAAACAAA...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCACCTCATTGGTCCGATaGCCACAGTTCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSTSLVR*PQFSQL
Trigger: CAACTGCGAGAACTGTGGGCATCGGACCAATGAGGT...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCACCTCATTGGTCCGATaGCCACAGTTCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLTSLVR*PQFSQL
Trigger: CAACTGCGAGAACTGTGGGCATCGGACCAATGAGGT...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTCTTGCCCCCGAGGACTaGCATTCCCAGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSILAPED*HSQFKF
Trigger: GAATTTGAACTGGGAATGGCAGTCCTCGGGGGCAAG...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGCACAGCTCTAGCATTTaGAGTTCCCTCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKHSSSI*SSLCQE
Trigger: TTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTG...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGCCGGGAGGCAAAGGTTaGAATAAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKPGGKG*NKPRSH
Trigger: GTGTGATCTTGGCTTATTGCAACCTTTGCCTCCCGG...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCGCCGTGCCAATGGCCTaGTCTGAGCTTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIAVPMA*SELWPL
Trigger: GAGAGGCCAAAGCTCAGAGCAGGCCATTGGCACGGC...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGCAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPFVYERQETTVQRTLAGQCKEH*LGSPGP
Trigger: GGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp GTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCCCATGTGTCATATGCTaGGTGCTGTGGAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: VQKIFPTPHFLAQPSPIPPCVIC*VLWSKT
Trigger: AGTCTTGCTCCACAGCACCCAGCATATGACACATGG...GGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCGAGAGTAGGGCTAACTaGTCAGGTACCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTESRAN*SGTPTG
Trigger: GCCAGTGGGGGTACCTGATCAGTTAGCCCTACTCTC...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATGGCAGGAGAATTGCTTaGACCCAGGAGGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYGRRIA*TQEARL
Trigger: CAGCCTTGCCTCCTGGGTTCAAGCAATTCTCCTGCC...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACTCGATCTCGGTGGGCTaGTGCTCCTCGTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNSISVG*CSSSSA
Trigger: CGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGA...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGTCGATCTCGGTGGGCTaGTGCTCCTCGTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTESISVG*CSSSSA
Trigger: CGCCGAGGACGAGGAGCAGCAGCCCACCGAGATCGA...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AGCACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCTGTAGCATCTTTGTTTaGCCTTCGTGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: STGDQSFNSGQSSFLAKGCSIFV*PSCRLV
Trigger: GACCAGCCTGCACGAAGGGCAAACAAAGATGCTACA...GCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR GCA 90 bp GGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCCTTAAACTTGCCCCCGAGGACTaGCATTCCCAGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: GPMPTVLAVGSHDDNLLKLAPED*HSQFKF
Trigger: GAATTTGAACTGGGAATGGCAGTCCTCGGGGGCAAG...TTTAAGGAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR GCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACCCTCCTCCTCAGCTTTaGCCAAATGTCAAATTATCA +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDPPPQL*PNVKLS
Trigger: TGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGG...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTAAATACCCTGCAGTCTaGACCACAGGAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTKYPAV*TTGVTF
Trigger: AAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTT...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAAGCAGCGCTGGAGGCTaGCCCTTGAGCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQSSAGG*PLSHPL
Trigger: CAGTGGGTGGCTCAAGGGCCAGCCTCCAGCGCTGCT...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACCAGAAAGAGCAGCGCTaGAGGCTGGCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDQKEQR*RLALEP
Trigger: TGGCTCAAGGGCCAGCCTCCAGCGCTGCTCTTTCTG...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTQCKEH*LGSPGP
Trigger: GGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGTTTCAGAGTCTGACTaGCATGGGTTTGACACCTGC +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPVSESD*HGFDTC
Trigger: GCAGGTGTCAAACCCATGCCAGTCAGACTCTGAAAC...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACATAACCTCCTTAAAGTaGGGGATTTGTACTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDITSLK*GICTSF
Trigger: GAAGCTAGTACAAATCCCTCACTTTAAGGAGGTTAT...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACGCCCTTCCAGTGTGGTaGACTTGCCCCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNALPVW*TCPRGL
Trigger: CAGTCCTCGGGGGCAAGTTCACCACACTGGAAGGGC...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAGAGGCCAGTGCTGTTTaGAAGTCATCATTTCAATGG +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQEASAV*KSSFQW
Trigger: CCATTGAAATGATGACTTTCAAACAGCACTGGCCTC...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCAGGTGCAGTAACAGTTCATaGATAGCGACTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: TGDQSFNSGQSSFLAKGRCSNSS*IATRSR
Trigger: CCGAGATCGAGTCGCTATGCATGAACTGTTACTGCA...CCTGCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431973.5
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTGCAGTAACAGTTCATaGATAGCGACTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSICSNSS*IATRSR
Trigger: CCGAGATCGAGTCGCTATGCATGAACTGTTACTGCA...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACATTTGTTTGCCCTTCGTaGAGGCTGGTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTFVCPS*RLVLLQ
Trigger: CTGGAGCAGGACCAGCCTGCACGAAGGGCAAACAAA...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACATCTGAGCGGGGGCATTaGATTCTGGGCAGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTSERGH*ILGSLC
Trigger: GCACAAACTGCCCAGAATGCAATGCCCCCGCTCAGA...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCCCAAGATCGCACCACTaGACTCCATCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTPRSHH*TPSWVT
Trigger: TGTCACCCAGGATGGAGTGCAGTGGTGCGATCTTGG...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TGGGGAAGTCTACTTAAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACCCCAGGAGGCAAGGCTaGAGTGAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: WGSLLKRPNDRSEGCLVNPRRQG*SEPRSH
Trigger: GTGCGATCTTGGCTCACTGCAGCCTTGCCTCCTGGG...GTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTTAAGTAGACTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAACATGGGTTTGACACCTaGCTCTTAGAAGCTCTACTT +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQHGFDT*LLEALL
Trigger: AAGTAGAGCTTCTAAGAGGCAGGTGTCAAACCCATG...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTGCTAGCGAAGTGGGGTaGAAGAGGTCATCCAAATTT +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIASEVG*KRSSKF
Trigger: AAATTTGGATGACCTCTTGCACCCCACTTCGCTAGC...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCATCAATCCTTCAACAGTaGTCAGAGCTCCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPSILQQ*SELLSG
Trigger: GCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGA...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp AGCACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCTCAATCCTTCAACAGTaGTCAGAGCTCCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: STGDQSFNSGQSSFLAKGSILQQ*SELLSG
Trigger: GCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGA...GCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR CCA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACAGGGTTAAGAAGAGATaGTCCACTATCAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDRVKKR*STIKCD
Trigger: GTCACATTTGATAGTGGACCATCTCTTCTTAACCCT...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCTACACAAGCCTGCCTTaGCTTCTCGTCCAATTTGGT +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSYTSLP*LLVQFG
Trigger: ACCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTA...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCGAGGCCAGTGCTGTTTaGAAGTCATCATTTCAATGG +
Preference number: 4 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFEASAV*KSSFQW
Trigger: CCATTGAAATGATGACTTTCAAACAGCACTGGCCTC...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGTCACCTTTTGTTTATaGGAGGCAGGAGACTACAGT +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPVTFCL*EAGDYS
Trigger: ACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGAC...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAGAGGCAAGGCTGCAGTaGGCCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQEARLQ*AKIAPL
Trigger: CAGTGGTGCGATCTTGGCTCACTGCAGCCTTGCCTC...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATGCAGGAGGCGCGTCATaGCATTGCAGTAACAGTTCA +
Preference number: 4 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYAGGAS*HCSNSS
Trigger: TGAACTGTTACTGCAATGGCATGACGCGCCTCCTGC...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGTGTAGCATCTTTGTTTaGCCTTCGTGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPFVYERQETTVQRTLAGCSIFV*PSCRLV
Trigger: GACCAGCCTGCACGAAGGGCAAACAAAGATGCTACA...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACAACCTCATTGGTCCGATaGCCACAGTTCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTTSLVR*PQFSQL
Trigger: CAACTGCGAGAACTGTGGGCATCGGACCAATGAGGT...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAATTGAACAAATACCCTaGAGTCTGCACCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: NLTALAFAVPSARKSLPPIEQIP*SLHHRS
Trigger: ACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTAGTCTTAGCCACCACTaGCCTAAATGTAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSISLSHH*PKCKQR
Trigger: TCTCTGCTTACATTTAGGGCAGTGGTGGCTAAGACT...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGTCTCGTCCAATTTGGTaGATCTCACACTACACAGCC +
Preference number: 4 (lower is better)
Translates to: IISMVTPSLVLDSVSPQESRPIW*ISHYTA
Trigger: GGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGA...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCTCAATCCTTCAACAGTaGTCAGAGCTCCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLHNPAPFPALHSSMTLISILQQ*SELLSG
Trigger: GCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGA...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTTTACCTTCGATGATCTaGTCCATCTTCTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTLPSMI*SIFWLN
Trigger: GTTTAGCCAGAAGATGGACCAGATCATCGAAGGTAA...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000429220.5
CDS-3UTR CCA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAACAGCAGAGTGTTCACTaGTCCTTAACTTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQQQSVH*SLTFRR
Trigger: TCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTG...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCTGGGTTATCCCAGTCTaGCACCTGGTCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIWVIPV*HLVLSL
Trigger: AAGACTGAGGACCAGGTGCCAGACTGGGATAACCCA...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGACAGATGCCGTGCCAATaGCCTGCTCTGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRQMPCQ*PALSFG
Trigger: GCCAAAGCTCAGAGCAGGCCATTGGCACGGCATCTG...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 72 bp TTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTaGCACAACCCAGCCCCATTCCCTGCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: FLFRRSSLLPIS*HNPAPFPALHS
Trigger: GGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
3UTR CAA 72 bp ACGTCTAATGACCGAACATGGCTGCATTTCACATACTaGACCCATGAAAGTAGGAGGCGTGCCCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: TSNDRTWLHFTY*THESRRRALMH
Trigger: ATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 72 bp ACTTCCACCCACCCATCTTCTGCCCATTTGTTTTCTTaGTCTTCAATTCCACTGCTACCCATCCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: TSTHPSSAHLFS*SSIPLLPILPQ
Trigger: CTGGGGTAGGATGGGTAGCAGTGGAATTGAAGACAAAGAAAACAAATGGGCAGAAGATGGGTGGGTGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TGGGGAAGTCTACTTAAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACGCTGGTGCTTCTTCTTaGAGCCCCAGCATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WGSLLKRPNDRSEGCLVNAGASS*SPSISS
Trigger: GGAAGAGATGCTGGGGCTTCAAGAAGAAGCACCAGC...GTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTTAAGTAGACTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCATAACCTCCTTAAAGTaGGGGATTTCTGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLITSLK*GISGKR
Trigger: CCGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTAT...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR GCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCTGTAGCATCTTTGTTTaGCCTTCGTGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTCSIFV*PSCRLV
Trigger: GACCAGCCTGCACGAAGGGCAAACAAAGATGCTACA...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GCAGTTGGTAGCCATGATGATAACCTCCTTAAAGTGAGGGATTTCTGGAAAACGTGGCTTCTCTGCTGGTaGTTCTTCTTGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AVGSHDDNLLKVRDFWKTWLLCW*FFLKPQ
Trigger: CTGGGGCTTCAAGAAGAAGCACCAGCAGAGAAGCCA...CGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR GCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGCATTTTGGTCAAAGGTaGGCTTGTAACGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SPFVYERQETTVQRTLAGHFGQR*ACNAPP
Trigger: AGGTGGAGCGTTACAAGCGCACCTTTGACCAAAATG...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATCACAGCTCTAGCATTTaGAGTTCCCTCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYHSSSI*SSLCQE
Trigger: TTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTG...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACAAAAGCCTCACACTTCTaGTCCAGTGAACACTGCCAG +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTKASHF*SSEHCQ
Trigger: CTGGCAGTGTTCACTGGAGCAGAAGTGTGAGGCTTT...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 4 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCAGCAGAGTGTTCACTaGTCCTTAACTTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSQQSVH*SLTFRR
Trigger: TCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTG...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACACAGTGCAAAGAACACTaGCTGGGAAGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTQCKEH*LGSPGP
Trigger: GGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACATTCCTAGGAACTGGGTaGATTCTGGGAGATTGCCTC +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTFLGTG*ILGDCL
Trigger: GAGGCAATCTCCCAGAATCCACCCAGTTCCTAGGAA...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp ATGGCCTGCTCTGAGCTTTGGCCTCTCTCTGCAGTTGTATCTAATAGAACAAATATTAGCTGGGTGCAGTaGTGGGCGTCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: MACSELWPLSAVVSNRTNISWVQ*WASVIP
Trigger: TGGGATTACAGACGCCCACCACTGCACCCAGCTAAT...ATTTGTTCTATTAGATACAACTGCAGAGAGAGGCCAAAGCTCAGAGCAGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATGTTCGTCCACACGTCTAATGACCGAACATGGCTGCATTTCACATACTTGACCTCATGTTACCTTCGATaGTCTGGTCCATCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: MFVHTSNDRTWLHFTYLTSCYLR*SGPSSG
Trigger: GCCAGAAGATGGACCAGATCATCGAAGGTAACATGA...GGTCAAGTATGTGAAATGCAGCCATGTTCGGTCATTAGACGTGTGGACGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTACACTAATCACCATCTaGTGTACTGTTTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSITLITI*CTVFLI
Trigger: GATCAGGAAAACAGTACATCAGATGGTGATTAGTGT...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTAGATGCCAAAGAATCTaGTATGGAGAGATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIRCQRI*YGEMSE
Trigger: TTCAGACATCTCTCCATATCAGATTCTTTGGCATCT...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAACGAGGACGCTGGGCTaGGAAGATAGGGCTTCACTA +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQTRTLG*EDRASL
Trigger: TAGTGAAGCCCTATCTTCTCAGCCCAGCGTCCTCGT...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACATGCAGTAACAGTTCATaGATAGCGACTCGATCTCGG +
Preference number: 4 (lower is better)
Translates to: PQESPFVYERQETTVQRTCSNSS*IATRSR
Trigger: CCGAGATCGAGTCGCTATGCATGAACTGTTACTGCA...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTCAATACAGAGGCCAGTaGTGTTTGAAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIQYRGQ*CLKVII
Trigger: AATGATGACTTTCAAACAGCACTGGCCTCTGTATTG...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCCCTCCTCCTCAGCTTTaGCCAAATGTCAAATTATCA +
Preference number: 4 (lower is better)
Translates to: SLHNPAPFPALHSSMTLIPPPQL*PNVKLS
Trigger: TGATAATTTGACATTTGGGCAAAGCTGAGGAGGAGG...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGAGTGTCTCCACCCTGTaGTGCAGGGCAGTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTESVSTL*CRAVKQ
Trigger: CTGCTTAACTGCCCTGCAGCACAGGGTGGAGACACT...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 4 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTGTTCTGTGGTGTGCTTaGCATAAAGTAGATAAGCAA +
Preference number: 4 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIVLWCA*HKVDKQ
Trigger: TTGCTTATCTACTTTATGCCAAGCACACCACAGAAC...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGATATGCTGGGTGCTGTaGAGCAAGACTCAGTTAACT +
Preference number: 4 (lower is better)
Translates to: SPFVYERQETTVQRTLAGICWVL*SKTQLT
Trigger: AGTTAACTGAGTCTTGCTCCACAGCACCCAGCATAT...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
3UTR CAA 72 bp CAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTaGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QIPCSLHHRSHL*FMRGRRLQCKE
Trigger: TTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACACTAATCACCATCTaGTGTACTGTTTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: IISMVTPSLVLDSVSPQETLITI*CTVFLI
Trigger: GATCAGGAAAACAGTACATCAGATGGTGATTAGTGT...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGATGTTCCTGGCACTTTaGCTCACCTACCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTEMFLAL*LTYPGL
Trigger: AAGGCCAGGGTAGGTGAGTCAAAGTGCCAGGAACAT...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TTCACATACTTGACCCATGAAAGTAGGAGGCGTGCCCTCATGCATGAACCACTTCTTGGGGATCAGTCTTaGAGCATGAATTTTTACCCA +
Preference number: 4 (lower is better)
Translates to: FTYLTHESRRRALMHEPLLGDQS*SMNFYP
Trigger: TGGGTAAAAATTCATGCTTCAAGACTGATCCCCAAG...AAGTGGTTCATGCATGAGGGCACGCCTCCTACTTTCATGGGTCAAGTATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATGGCGCGTCATGCCATTaGAGTAACAGTTCATGCATA +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYGASCH*SNSSCI
Trigger: TATGCATGAACTGTTACTGCAATGGCATGACGCGCC...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGTGGCTTCTCTGCTGGTaGTTCTTCTTGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTEWLLCW*FFLKPQ
Trigger: CTGGGGCTTCAAGAAGAAGCACCAGCAGAGAAGCCA...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAATGGCTTCTCTGCTGGTaGTTCTTCTTGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQWLLCW*FFLKPQ
Trigger: CTGGGGCTTCAAGAAGAAGCACCAGCAGAGAAGCCA...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACACCTCATTGGTCCGATaGCCACAGTTCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNTSLVR*PQFSQL
Trigger: CAACTGCGAGAACTGTGGGCATCGGACCAATGAGGT...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAACTTGCCCCCGAGGACTaGCATTCCCAGTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQLAPED*HSQFKF
Trigger: GAATTTGAACTGGGAATGGCAGTCCTCGGGGGCAAG...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATCATTTTGGTCAAAGGTaGGCTTGTAACGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYHFGQR*ACNAPP
Trigger: AGGTGGAGCGTTACAAGCGCACCTTTGACCAAAATG...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCCAATACAGAGGCCAGTaGTGTTTGAAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: SLHNPAPFPALHSSMTLIQYRGQ*CLKVII
Trigger: AATGATGACTTTCAAACAGCACTGGCCTCTGTATTG...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCGAATTAAATGCCAGCTaGAATCCCCAAATTACAGTA +
Preference number: 4 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSELNAS*NPQITV
Trigger: TACTGTAATTTGGGGATTGCAGCTGGCATTTAATTC...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGAATTTGCAGTTCCCTCTaGCAGGAAATCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRICSSL*QEISSP
Trigger: GGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAAT...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATAAATACCCTGCAGTCTaGACCACAGGAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYKYPAV*TTGVTF
Trigger: AAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTT...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATTGAACAAATACCCTaGAGTCTGCACCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYIEQIP*SLHHRS
Trigger: ACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACCCCCATACACAAGCCTaGCTTGGCTTCTCGTCCAAT +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNPHTQA*LGFSSN
Trigger: ATTGGACGAGAAGCCAAGGCAGGCTTGTGTATGGGG...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATGAATCCACATGTTCCTaGCACTTTGACTCACCTACC +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYESTCS*HFDSPT
Trigger: GGTAGGTGAGTCAAAGTGCCAGGAACATGTGGATTC...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAATTTGCAGTTCCCTCTaGCAGGAAATCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQICSSL*QEISSP
Trigger: GGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAAT...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGCACAGCTCTAGCATTTaGAGTTCCCTCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTEHSSSI*SSLCQE
Trigger: TTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTG...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACGGAGGCGTGCCCTCATaGATGAACCACTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNGGVPS*MNHFPF
Trigger: AAAAGGAAAGTGGTTCATGCATGAGGGCACGCCTCC...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp TCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCTCCATGACACTAATCCTCTGTTCATGTCATTaGAGTAACAGTTCATGCATA +
Preference number: 4 (lower is better)
Translates to: SLHNPAPFPALHSSMTLILCSCH*SNSSCI
Trigger: TATGCATGAACTGTTACTGCAATGACATGAACAGAG...GATTAGTGTCATGGAGGAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429220.5
CDS-3UTR CCA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCATAACACTTTCCAAGTaGAAAATCACTTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFITLSK*KITCDL
Trigger: AAGGTCACAAGTGATTTTCCACTTGGAAAGTGTTAT...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCGTGAGACGAGGACGCTaGGCTGAGAAGATAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FILCRGFRALPELSHLTLVRRGR*AEKIGL
Trigger: AAGCCCTATCTTCTCAGCCCAGCGTCCTCGTCTCAC...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACTCATGTTACCTTCGATaGTCTGGTCCATCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNSCYLR*SGPSSG
Trigger: GCCAGAAGATGGACCAGATCATCGAAGGTAACATGA...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000429220.5
CDS-3UTR TCA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGTGTGCACAGATCTCTaGCTCAGACCAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKVCTDL*LRPDVL
Trigger: GAGGACATCTGGTCTGAGTCAGAGATCTGTGCACAC...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACAGTCATTTGCTAACCTaGGTCTCCAAACACCTTACT +
Preference number: 4 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDSHLLT*VSKHLT
Trigger: AGTAAGGTGTTTGGAGACTCAGGTTAGCAAATGACT...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGATGCATTTCACATACTTaGCCCATGAAAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRCISHT*PMKVGG
Trigger: GCCTCCTACTTTCATGGGTCAAGTATGTGAAATGCA...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATAATACTAAACTGAGGTaGACGCACAAAATAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYNTKLR*THKISS
Trigger: GCTGCTTATTTTGTGCGTTCACCTCAGTTTAGTATT...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAGGCGCGTCATGCCATTaGAGTAACAGTTCATGCATA +
Preference number: 4 (lower is better)
Translates to: VSPQETPFLFKVSILYTQGASCH*SNSSCI
Trigger: TATGCATGAACTGTTACTGCAATGGCATGACGCGCC...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR GCA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAAAATACCCTGCAGTCTaGACCACAGGAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTKYPAV*TTGVTF
Trigger: AAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTT...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCACTGCCCTTCATACTTaGTCCCAACACTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: FILCRGFRALPELSHLTLTALHT*SQHSPP
Trigger: GGGAGGTGAGTGTTGGGAGCAAGTATGAAGGGCAGT...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGAAAGACTTTATTCTTTaGAGGGGGTTTAGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: IISMVTPSLVLDSVSPQEKDFIL*RGFRAL
Trigger: TAAAGCTCTAAACCCCCTGCAAAGAATAAAGTCTTT...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACCAGCAGAGTGTTCACTaGTCCTTAACTTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDQQSVH*SLTFRR
Trigger: TCTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTG...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGAAATACAAAAATTAGCTaGGTGCAGTGGTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRNTKIS*VQWWAS
Trigger: AGACGCCCACCACTGCACCCAGCTAATTTTTGTATT...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp AGAGGGTTGTCTGGTAAACTTAGATTCCCAAGTCAGCTGGAAACATACCTAGAGATAACCTCCTTAAAGTaGGGGATTTGTACTAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGLSGKLRFPSQLETYLEITSLK*GICTSF
Trigger: GAAGCTAGTACAAATCCCTCACTTTAAGGAGGTTAT...CTCTAGGTATGTTTCCAGCTGACTTGGGAATCTAAGTTTACCAGACAACCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATAGGGTCAATACAGAGGCCAGTGCTGTTTGAAAGTCATCATTTCAATGGTAACGTCACCTTTTGTTTATaGGAGGCAGGAGACTACAGT +
Preference number: 4 (lower is better)
Translates to: IGSIQRPVLFESHHFNGNVTFCL*EAGDYS
Trigger: ACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGAC...GTTACCATTGAAATGATGACTTTCAAACAGCACTGGCCTCTGTATTGACCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp AGGAGGCTGAATTCTAACAGCATGATATCAAACAAGGATAGGGTCAATACAGAGGTCACCTTTTGTTTATaGGAGGCAGGAGACTACAGT +
Preference number: 4 (lower is better)
Translates to: RRLNSNSMISNKDRVNTEVTFCL*EAGDYS
Trigger: ACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGAC...CTCTGTATTGACCCTATCCTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATATATGGAGAGATGTCTaGAAGCAGAACTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYIWRDV*KQNSQK
Trigger: TTTCTGAGAGTTCTGCTTTCAGACATCTCTCCATAT...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp AAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACTTAGATTCCCAAGTCCTCCTCCACTCATCATaGCACAGATGTACATTCAGT +
Preference number: 4 (lower is better)
Translates to: KRPNDRSEGCLVNLDSQVLLHSS*HRCTFS
Trigger: ACTGAATGTACATCTGTGTCATGATGAGTGGAGGAG...GACTTGGGAATCTAAGTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATCAATACAGAGGCCAGTaGTGTTTGAAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYQYRGQ*CLKVII
Trigger: AATGATGACTTTCAAACAGCACTGGCCTCTGTATTG...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGATTTGCAGTTCCCTCTaGCAGGAAATCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKICSSL*QEISSP
Trigger: GGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAAT...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR GCA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAAGAGACACCATTTTCTaGAGTGTGCATCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTRDTIF*SVHQAH
Trigger: ATGTGCCTGATGCACACTGCAGAAAATGGTGTCTCT...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGATTACCTTCGATGATCTaGTCCATCTTCTGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRLPSMI*SIFWLN
Trigger: GTTTAGCCAGAAGATGGACCAGATCATCGAAGGTAA...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000429220.5
CDS-3UTR CCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCGAACTGGGTGGATTCTaGGAGATTGCCTCACACCAA +
Preference number: 4 (lower is better)
Translates to: FILCRGFRALPELSHLTLELGGF*EIASHQ
Trigger: TTGGTGTGAGGCAATCTCCCAGAATCCACCCAGTTC...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR TCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGAACACTAATCACCATCTaGTGTACTGTTTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRTLITI*CTVFLI
Trigger: GATCAGGAAAACAGTACATCAGATGGTGATTAGTGT...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR TCA 90 bp TGGGGAAGTCTACTTAAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACTTTACAGATAAGAACTaGAGCGTGGCAAGATTAAGG +
Preference number: 4 (lower is better)
Translates to: WGSLLKRPNDRSEGCLVNFTDKN*SVARLR
Trigger: CCTTAATCTTGCCACGCTTCAGTTCTTATCTGTAAA...GTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTTAAGTAGACTTCCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp GACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATGAATTAAATGCCAGCTaGAATCCCCAAATTACAGTA +
Preference number: 4 (lower is better)
Translates to: DSVSPQETPFLFKVSILYELNAS*NPQITV
Trigger: TACTGTAATTTGGGGATTGCAGCTGGCATTTAATTC...ATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp GCAGTTGGTAGCCATGATGATAACCTCCTTAAAGTGAGGGATTTCTGGAAAACGAAAGTGAGGGATTTCTaGAAAACGGAGTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AVGSHDDNLLKVRDFWKTKVRDF*KTELRK
Trigger: TTTCCTTAACTCCGTTTTCCAGAAATCCCTCACTTT...CGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR TCA 90 bp TTTATTCTTTGCAGGGGGTTTAGAGCTTTACCTGAATTATCTCATTTAACCCTCATCAGTCTTGAAGCATaGATTTTTACCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FILCRGFRALPELSHLTLISLEA*IFTQWA
Trigger: GGCCCACTGGGTAAAAATTCATGCTTCAAGACTGAT...GAGGGTTAAATGAGATAATTCAGGTAAAGCTCTAAACCCCCTGCAAAGAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGATTGAACAAATACCCTaGAGTCTGCACCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKIEQIP*SLHHRS
Trigger: ACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CCA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGATTAGAGATACAGGTATaGAAGTTAGTCCCACATGAT +
Preference number: 4 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRLEIQV*KLVPHD
Trigger: ATCATGTGGGACTAACTTCCATACCTGTATCTCTAA...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAATTAAAGTTTTCAGTTaGCCAAGTCAACTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTIKVFS*PSQLPF
Trigger: GAAGGGCAGTTGACTTGGCCAACTGAAAACTTTAAT...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CCA 90 bp AGAACAAATACAGTAATTGTGGAGCTGAGCTTAAAATATTCAGACCTCAGGTTTGCTTCTCGTCCAATTTaGTGCATCTCACACTACACA +
Preference number: 4 (lower is better)
Translates to: RTNTVIVELSLKYSDLRFASRPI*CISHYT
Trigger: TGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGC...AAACCTGAGGTCTGAATATTTTAAGCTCAGCTCCACAATTACTGTATTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR GCA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGTATGAAACTGAAGAATaGCTTGTCATCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKYETEE*LVIKGQ
Trigger: CTGCCCTTTGATGACAAGGCATTCTTCAGTTTCATA...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp TCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCCCTGACGCCATGTTGAGGGGGTaGCAGCACAGGCCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SLCQEISSPRYPHSSLPDAMLRG*QHRPRK
Trigger: CTTTCTGGGCCTGTGCTGCAACCCCCTCAACATGGC...GTCAGGGAGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp CTGCCTTGGCTTCTCGTCCAATTTGGTGCATCTCACACTACACAGCCCTGCCCCAGGCAAGAGAATCGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LPWLLVQFGASHTTQPCPRQENR*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCGATTCTCTTGCCT...GGGGCAGGGCTGTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGACCCAGTGGGCCATGTaGAGGGGGTTGCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: SPFVYERQETTVQRTLAGTQWAM*RGLQHR
Trigger: CCTGTGCTGCAACCCCCTCAACATGGCCCACTGGGT...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp GGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACTGGTCCTTAACTTTCAGAAGTCAGCTGTAGCATCTTaGTTTGCCCTTCGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GKSRAQAAECSLVLNFQKSAVAS*FALRAG
Trigger: GCCTGCACGAAGGGCAAACAAAGATGCTACAGCTGA...CTTCTGAAAGTTAAGGACCAGTGAACACTCTGCTGCTTGGGCCCTGGACTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp CAGTGCAAAGAACACTGGCTGGGAAGTCCAGGGCCCAAGCAGCAGAGTGTTCACCACAGGAGTCACCTTTaGTTTATGAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QCKEHWLGSPGPKQQSVHHRSHL*FMRGRR
Trigger: TCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTG...GTGAACACTCTGCTGCTTGGGCCCTGGACTTCCCAGCCAGTGTTCTTTGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCGCTGAACTGGAGCACTaGAAGCCCCAGCATCTCTTC +
Preference number: 5 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFAELEH*KPQHLF
Trigger: GAAGAGATGCTGGGGCTTCAAGTGCTCCAGTTCAGC...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429220.5
CDS-3UTR CAA 90 bp ACGGGTGATCAATCCTTCAACAGTGGTCAGAGCTCCTTTCTGGCTAAAGGCAGGTCAGCTGTAGCATCTTaGTTTGCCCTTCGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TGDQSFNSGQSSFLAKGRSAVAS*FALRAG
Trigger: GCCTGCACGAAGGGCAAACAAAGATGCTACAGCTGA...CCTGCCTTTAGCCAGAAAGGAGCTCTGACCACTGTTGAAGGATTGATCACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425791.1
ENST00000431973.5
CDS-3UTR CAA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTTGCTGGTGCTTCTTCTaGAAGCCCCAGCATCTCTTC +
Preference number: 5 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFCWCFF*KPQHLF
Trigger: GAAGAGATGCTGGGGCTTCAAGAAGAAGCACCAGCA...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000444935.5
CDS-3UTR CAA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCCCACAGTTCTCGCAGTaGGTAGCCATGATGATAACC +
Preference number: 5 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFPQFSQ*VAMMIT
Trigger: GGTTATCATCATGGCTACCAACTGCGAGAACTGTGG...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp AAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTCCACAGTTCTCGCAGTaGGTAGCCATGATGATAACC +
Preference number: 5 (lower is better)
Translates to: KIFPTPHFLAQPSPIPCFPQFSQ*VAMMIT
Trigger: GGTTATCATCATGGCTACCAACTGCGAGAACTGTGG...AAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTCCACAGTTCTCGCAGTaGGTAGCCATGATGATAACC +
Preference number: 5 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIPQFSQ*VAMMIT
Trigger: GGTTATCATCATGGCTACCAACTGCGAGAACTGTGG...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp CTCATTGGTCCGATGCCCACAGTTCTCGCAGTTGGTAGCCATGATGATAACCTCCCACAGTTCTCGCAGTaGGTAGCCATGATGATAACC +
Preference number: 5 (lower is better)
Translates to: LIGPMPTVLAVGSHDDNLPQFSQ*VAMMIT
Trigger: GGTTATCATCATGGCTACCAACTGCGAGAACTGTGG...GAGGTTATCATCATGGCTACCAACTGCGAGAACTGTGGGCATCGGACCAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR CAA 90 bp AACCTCACAGCTCTAGCATTTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCACTGCAAGTCTCAGACTaGAGGAGGTCTCTGGTCATA +
Preference number: 5 (lower is better)
Translates to: NLTALAFAVPSARKSLPPLQVSD*RRSLVI
Trigger: TATGACCAGAGACCTCCTCAAGTCTGAGACTTGCAG...TGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAAATGCTAGAGCTGTGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp TCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTGTGAAAGGATTTTaGGTCACCAGTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: SFTCAGLGLPSGDSFPVQSVKGF*VTSSRM
Trigger: CATCCGGGAACTGGTGACCAAAAATCCTTTCACACT...TTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000227322.8
ENST00000429220.5
CDS-3UTR CAA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCATACACAAGCCTGCCTaGGCTTCTCGTCCAATTTGG +
Preference number: 5 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSIHKPA*ASRPIW
Trigger: CCAAATTGGACGAGAAGCCAAGGCAGGCTTGTGTAT...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCCATGTTCCTGGCACTTaGACTCACCTACCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIHVPGT*THLPWP
Trigger: AGGCCAGGGTAGGTGAGTCAAAGTGCCAGGAACATG...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTACCTCCTCCTCAGCTTaGCCCAAATGTCAAATTATC +
Preference number: 5 (lower is better)
Translates to: VLDSVSPQETPFLFKVSITSSSA*PKCQII
Trigger: GATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGT...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTAAACTGAAGAATGCCTaGTCATCAAAGGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIKLKNA*SSKGRK
Trigger: CTTCCTGCCCTTTGATGACAAGGCATTCTTCAGTTT...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCAGAGGCCAGTGCTGTTaGAAAGTCATCATTTCAATG +
Preference number: 5 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSRGQCC*KVIISM
Trigger: CATTGAAATGATGACTTTCAAACAGCACTGGCCTCT...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGCTGCATTTCACATACTaGACCCATGAAAGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: IISMVTPSLVLDSVSPQELHFTY*THESRR
Trigger: CCTCCTACTTTCATGGGTCAAGTATGTGAAATGCAG...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp AGGCTAGCGAAGTGGGGTGCAAGAGGTCATCCAAATTTCTTGAAATACCAGATCGGCTTCTCGTCCAATTaGGTGCATCTCACACTACAC +
Preference number: 5 (lower is better)
Translates to: RLAKWGARGHPNFLKYQIGFSSN*VHLTLH
Trigger: GTGTAGTGTGAGATGCACCAAATTGGACGAGAAGCC...GATCTGGTATTTCAAGAAATTTGGATGACCTCTTGCACCCCACTTCGCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp GCAGTTGGTAGCCATGATGATAACCTCCTTAAAGTGAGGGATTTCTGGAAAACGCTGCAAGTCTCAGACTaGAGGAGGTCTCTGGTCATA +
Preference number: 5 (lower is better)
Translates to: AVGSHDDNLLKVRDFWKTLQVSD*RRSLVI
Trigger: TATGACCAGAGACCTCCTCAAGTCTGAGACTTGCAG...CGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR CAA 90 bp TTGCAGTTCCCTCTGCCAGGAAATCTCTTCCCCCAGATACCCACACAGCTCACTCAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTA +
Preference number: 5 (lower is better)
Translates to: LQFPLPGNLFPQIPTQLTQIITF*FRRSSL
Trigger: TAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTG...AGTGAGCTGTGTGGGTATCTGGGGGAAGAGATTTCCTGGCAGAGGGAACTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp TGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATCACAGGAGTCACCTTTaGTTTATGAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: WTRSPLRRLLSCSKSVFYHRSHL*FMRGRR
Trigger: TCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTG...ATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp TTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCCTGCTTTACATTCATGAACTGGTCTTTATaGAACAAATACCCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: FPTPHFLAQPSPIPCFTFMNWSL*NKYPAV
Trigger: GACTGCAGGGTATTTGTTCAATAAAGACCAGTTCAT...GAATGTAAAGCAGGGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAGAGGCTGAGGCAGAATaGCTTAAACCCGGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: VSPQETPFLFKVSILYTQEAEAE*LKPGRQ
Trigger: TTGCCTCCCGGGTTTAAGCAATTCTGCCTCAGCCTC...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp AGAGGGTTGTCTGGTAAACTTAGATTCCCAAGTCAGCTGGAAACATACCTAGAGGTGGATTCTGGGAGATaGCCTCACACCAACCAAACT +
Preference number: 5 (lower is better)
Translates to: RGLSGKLRFPSQLETYLEVDSGR*PHTNQT
Trigger: AGTTTGGTTGGTGTGAGGCAATCTCCCAGAATCCAC...CTCTAGGTATGTTTCCAGCTGACTTGGGAATCTAAGTTTACCAGACAACCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp GTGCTGGACTCGGTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTGGCCTCTCTCTGCAGTaGTATCTAATAGAACAAATA +
Preference number: 5 (lower is better)
Translates to: VLDSVSPQETPFLFKVSIGLSLQ*YLIEQI
Trigger: TATTTGTTCTATTAGATACAACTGCAGAGAGAGGCC...AATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGACCGAGTCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp TCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACACTGGCTGGGGCTTGGGGATCAGTCTaGAAGCATGAATTTTTACCC +
Preference number: 5 (lower is better)
Translates to: SPFVYERQETTVQRTLAGAWGSV*KHEFLP
Trigger: GGGTAAAAATTCATGCTTCAAGACTGATCCCCAAGC...CCCAGCCAGTGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp TGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCCAGCCCCATTCCGCAAACAATAGTTTCTaGGACCAAGAGTCAAAAAGG +
Preference number: 5 (lower is better)
Translates to: CSEDLPYSPFPCTTQPHSANNSF*DQESKR
Trigger: CCTTTTTGACTCTTGGTCCAAGAAACTATTGTTTGC...GGAATGGGGCTGGGTTGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS GCA 90 bp TGTTCATGTCCTGGGAAGAAAAGAATACGTTCAGTACAAAGAGACTaGAGAACAGCTTCTCCTCAAGTAATAACCAGACCGTCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: CSCPGKKRIRSVQRD*RTASPQVITRPSPS
Trigger: GGAAGGGGACGGTCTGGTTATTACTTGAGGAGAAGCTGTTCTGCAGTCTCTTTGTACTGAACGTATTCTTTTCTTCCCAGGACATGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498065.1
CDS-3UTR CAA 90 bp ATTGAACAAATACCCTGCAGTCTGCACCACAGGAGTCACCTTTTGTTTATGAGACTGCAAGTCTCAGACTaGAGGAGGTCTCTGGTCATA +
Preference number: 5 (lower is better)
Translates to: IEQIPCSLHHRSHLLFMRLQVSD*RRSLVI
Trigger: TATGACCAGAGACCTCCTCAAGTCTGAGACTTGCAG...TCTCATAAACAAAAGGTGACTCCTGTGGTGCAGACTGCAGGGTATTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GCAGTTGGTAGCCATGATGATAACCTCCTTAAAGTGAGGGATTTCTGGAAAACGAGTGTGAAAGGATTTTaGGTCACCAGTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: AVGSHDDNLLKVRDFWKTSVKGF*VTSSRM
Trigger: CATCCGGGAACTGGTGACCAAAAATCCTTTCACACT...CGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR CAA 90 bp CCACAGGAGTCACCTTTTGTTTATGAGAGGCAGGAGACTACAGTGCAAAGAACAACCTCCTCCTCAGCTTaGCCCAAATGTCAAATTATC +
Preference number: 5 (lower is better)
Translates to: PQESPFVYERQETTVQRTTSSSA*PKCQII
Trigger: GATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGT...TGTTCTTTGCACTGTAGTCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp ATCATTTCAATGGTAACTCCTTCACTTGTGCTGGACTCGGTCTCCCCTCAGGAGATGAACTGGTCTTTATaGAACAAATACCCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: IISMVTPSLVLDSVSPQEMNWSL*NKYPAV
Trigger: GACTGCAGGGTATTTGTTCAATAAAGACCAGTTCAT...CTCCTGAGGGGAGACCGAGTCCAGCACAAGTGAAGGAGTTACCATTGAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACATCTTCAGAGTTAAGTTaGCAACACAGCCGGACGCGG +
Preference number: 5 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTSSELS*QHSRTR
Trigger: CCGCGTCCGGCTGTGTTGCAAACTTAACTCTGAAGA...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS CCA 90 bp GCAGTTGGTAGCCATGATGATAACCTCCTTAAAGTGAGGGATTTCTaGAAAACGGAGTTAAGGAAATCTACTTCCAGGCGAACAAGACCA +
Preference number: 5 (lower is better)
Translates to: AVGSHDDNLLKVRDF*KTELRKSTSRRTRP
Trigger: TGGTCTTGTTCGCCTGGAAGTAGATTTCCTTAACTCCGTTTTCCAGAAATCCCTCACTTTAAGGAGGTTATCATCATGGCTACCAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449430.1
CDS-3UTR CAA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACACTGCAAGTCTCAGACTaGAGGAGGTCTCTGGTCATA +
Preference number: 5 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTLQVSD*RRSLVI
Trigger: TATGACCAGAGACCTCCTCAAGTCTGAGACTTGCAG...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp TGGGGAAGTCTACTTAAGAGACCAAATGATAGATCAGAGGGTTGTCTGGTAAACAGTGTGAAAGGATTTTaGGTCACCAGTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: WGSLLKRPNDRSEGCLVNSVKGF*VTSSRM
Trigger: CATCCGGGAACTGGTGACCAAAAATCCTTTCACACT...GTTTACCAGACAACCCTCTGATCTATCATTTGGTCTCTTAAGTAGACTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGTCAGCTGTAGCATCTTaGTTTGCCCTTCGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKSAVAS*FALRAG
Trigger: GCCTGCACGAAGGGCAAACAAAGATGCTACAGCTGA...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp AGAACAAATACAGTAATTGTGGAGCTGAGCTTAAAATATTCAGACCTCAGGTTTTCAGCTGTAGCATCTTaGTTTGCCCTTCGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: RTNTVIVELSLKYSDLRFSAVAS*FALRAG
Trigger: GCCTGCACGAAGGGCAAACAAAGATGCTACAGCTGA...AAACCTGAGGTCTGAATATTTTAAGCTCAGCTCCACAATTACTGTATTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS-3UTR CAA 90 bp AAATTATCACCTTCTTGTTCAGAAGATCTTCCCTACTCCCCATTTCCTTGCACAACCTCCTCCTCAGCTTaGCCCAAATGTCAAATTATC +
Preference number: 5 (lower is better)
Translates to: KLSPSCSEDLPYSPFPCTTSSSA*PKCQII
Trigger: GATAATTTGACATTTGGGCAAAGCTGAGGAGGAGGT...TGTGCAAGGAAATGGGGAGTAGGGAAGATCTTCTGAACAAGAAGGTGATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAAAGAGGCCAGTGCTGTTaGAAAGTCATCATTTCAATG +
Preference number: 5 (lower is better)
Translates to: VSPQETPFLFKVSILYTQRGQCC*KVIISM
Trigger: CATTGAAATGATGACTTTCAAACAGCACTGGCCTCT...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGCACAGGAGTCACCTTTaGTTTATGAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKHRSHL*FMRGRR
Trigger: TCTCCTGCCTCTCATAAACAAAAGGTGACTCCTGTG...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GAGCTTAAAATATTCAGACCTCAGGTTTCAGAGTCTGACTGGCATGGGTTTGACGCTATAGTCAACATGTaGTACATTAGATTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ELKIFRPQVSESDWHGFDAIVNM*YIRFPE
Trigger: TTCTGGGAATCTAATGTACAACATGTTGACTATAGC...GTCAAACCCATGCCAGTCAGACTCTGAAACCTGAGGTCTGAATATTTTAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000227322.8
CDS GCA 90 bp GAGCCAGGCTGTCCAAATGGTGAGAATACTATTCATAACAACTACTaGTCATTTCATACCCTCAGACAACATTTACAAAGCATTTTCACA +
Preference number: 5 (lower is better)
Translates to: EPGCPNGENTIHNNY*SFHTLRQHLQSIFT
Trigger: TGTGAAAATGCTTTGTAAATGTTGTCTGAGGGTATGAAATGAGCAGTAGTTGTTATGAATAGTATTCTCACCATTTGGACAGCCTGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498065.1
CDS-3UTR CAA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGAGAGGCCAGTGCTGTTaGAAAGTCATCATTTCAATG +
Preference number: 5 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKRGQCC*KVIISM
Trigger: CATTGAAATGATGACTTTCAAACAGCACTGGCCTCT...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp GTCTCCCCTCAGGAGACTCCTTTCCTGTTCAAAGTCAGTATTTTATATACTCAACAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTA +
Preference number: 5 (lower is better)
Translates to: VSPQETPFLFKVSILYTQQIITF*FRRSSL
Trigger: TAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTG...TTGAGTATATAAAATACTGACTTTGAACAGGAAAGGAGTCTCCTGAGGGGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS-3UTR CAA 90 bp CACGGGAAAATTTTCTTTAGGAGGCTGAATTCTAACAGCATGATATCAAACAAGCAAATTATCACCTTCTaGTTCAGAAGATCTTCCCTA +
Preference number: 5 (lower is better)
Translates to: HGKIFFRRLNSNSMISNKQIITF*FRRSSL
Trigger: TAGGGAAGATCTTCTGAACAAGAAGGTGATAATTTG...CTTGTTTGATATCATGCTGTTAGAATTCAGCCTCCTAAAGAAAATTTTCCCGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000227322.8
ENST00000429220.5
ENST00000444935.5
CDS GCA 72 bp TGTCCAAATGGTGAGAATACTATTCATAACAACTACTaGTCATTTCATACCCTCAGACAACATTTACAAAGC +
Preference number: 6 (lower is better)
Translates to: CPNGENTIHNNY*SFHTLRQHLQS
Trigger: GCTTTGTAAATGTTGTCTGAGGGTATGAAATGAGCAGTAGTTGTTATGAATAGTATTCTCACCATTTGGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498065.1