Pregenerated sensors for ZPBP (Homo sapiens)
Ensembl gene IDs: ENSG00000042813Ensembl transcript IDs: ENST00000046087.7, ENST00000413331.1, ENST00000419417.5, ENST00000450231.1, ENST00000465922.1, ENST00000491129.5
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCAACTCCTCTATGCAAATaGAGAGTGACTTTGTACGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSEKLLVIEPSVQLNFLSTPLCK*RVTLYD Trigger: GTCGTACAAAGTCACTCTGCATTTGCATAGAGGAGT...TGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCTATGCAAATGCAGAGTaGCTTTGTACGACTTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: FSLNLWSSEKLLVIEPSVYANAE*LCTTSI Trigger: TATGGAAGTCGTACAAAGTCACTCTGCATTTGCATA...GACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| 3UTR CAA 90 bp | TTGATCCCACTATTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTaGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LIPLFSLNLWSSEKL*VIEPSVQLNFLSFT Trigger: AGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR GCA 90 bp | CTATTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTAGCTGCGGTTGTCCCTaGGGAGCCGGCAGGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLNLWSSEKLLVIEPSSCGCP*GAGRAA Trigger: CGCCGCCCTGCCGGCTCCGCAGGGACAACCGCAGCT...ACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTAAGAGTGGGGGAAGCTaGGGTTGTCCCTGCGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLVIEPSVQLNFLSFTPKSGGS*GCPCGA Trigger: GGCTCCGCAGGGACAACCGCAGCTTCCCCCACTCTT...AGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR CCA 90 bp | TCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCAAGGCAATTCGAAGAGTaGGGGAAGCTGCGGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEKLLVIEPSVQLNFLSRQFEE*GKLRLS Trigger: GGACAACCGCAGCTTCCCCCACTCTTCGAATTGCCT...TGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTACGTGTGGACTCTTTTaGTGGAGCATGACATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLVIEPSVQLNFLSFTPTCGLF*WSMTYA Trigger: AGCGTATGTCATGCTCCATCAAAAGAGTCCACACGT...AGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR TCA 90 bp | TGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCTTTTGATGGAGCATaGCATACGCTTTCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSEKLLVIEPSVQLNFLSFDGA*HTLSLE Trigger: TTCCAGTGAAAGCGTATGTCATGCTCCATCAAAAGA...CAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR TCA 90 bp | ACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCAACTTCCCACTATTTTCACTaGATCTTTGGTCAAGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TESLVKRKALGNRTKCPTSHYFH*IFGQAK Trigger: TTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGA...AGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR TCA 90 bp | AAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTTATGCAAATGCAGAGTaGCTTTGTACGACTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KLLVIEPSVQLNFLSFTPYANAE*LCTTSI Trigger: TATGGAAGTCGTACAAAGTCACTCTGCATTTGCATA...AGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR GCA 90 bp | GTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTCTATGCAAAACTCCTCTATGCAAATaGAGAGTGACTTTGTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: VIEPSVQLNFLSFTPLCKTPLCK*RVTLYD Trigger: GTCGTACAAAGTCACTCTGCATTTGCATAGAGGAGT...TTTGCATAGAGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR CCA 90 bp | TTCACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCATTTTCACTGAATCTTTaGTCAAGCGAAAAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTESLVKRKALGNRTKCPFSLNL*SSEKLL Trigger: CAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAA...TGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| 3UTR CAA 72 bp | CTATTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTaGGTAATCGAACCAAGTGTCCAACTTAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLNLWSSEKL*VIEPSVQLNFL Trigger: CAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR CAA 90 bp | TTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCTGGGGGAAGCTGCGGTaGTCCCTGCGGAGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLNLWSSEKLLVIEPSVWGKLR*SLRSRQ Trigger: CTGCCGGCTCCGCAGGGACAACCGCAGCTTCCCCCA...GACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS TCA 90 bp | CATCTCCTCTTATCTGGGGTCACATATCTCTTCGTGATTGCATTCTaGTCCCCAGTACTTAGCATGTGCGTAACAACTCTGCCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLLLSGVTYLFVIAF*SPVLSMCVTTLPLL Trigger: AAGCAGAGGCAGAGTTGTTACGCACATGCTAAGTACTGGGGATCAGAATGCAATCACGAAGAGATATGTGACCCCAGATAAGAGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465922.1 |
||
| CDS TCA 90 bp | GCATTTCGCAGTTGTTGCGTTACACATAACACGTGTGGACTCTTTTaGTGGAGCATGACATACGCTTTCACTGGAAAACTTGTTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: AFRSCCVTHNTCGLF*WSMTYAFTGKLVDP Trigger: GGGATCAACAAGTTTTCCAGTGAAAGCGTATGTCATGCTCCATCAAAAGAGTCCACACGTGTTATGTGTAACGCAACAACTGCGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000046087.7 ENST00000419417.5 ENST00000450231.1 |
||
| CDS GCA 90 bp | ATAGTGGAAGTCCCAACTACACAGCACTCAGGACATTTTGGATGTTaGTGGACATTCATTCCATATCCTGGAAAGCAGCGATTAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IVEVPTTQHSGHFGC*WTFIPYPGKQRLIQ Trigger: TTGGATTAATCGCTGCTTTCCAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTGTAGTTGGGACTTCCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491129.5 |
||
| CDS-3UTR CAA 90 bp | ACTGAATCTTTGGTCAAGCGAAAAGCTCTTGGTAATCGAACCAAGTGTCCAACTTCAAGCGAAAAGCTCTaGGTAATCGAACCAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TESLVKRKALGNRTKCPTSSEKL*VIEPSV Trigger: GACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGA...AGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR CAA 90 bp | AAGCTCTTGGTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTTCACTGGAAAACTTGTaGATCCCACTATTTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLVIEPSVQLNFLSFTPSLENL*IPLFSL Trigger: CAGTGAAAATAGTGGGATCAACAAGTTTTCCAGTGA...AGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTACCAAGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS-3UTR CAA 90 bp | GTAATCGAACCAAGTGTCCAACTTAATTTCCTGTCATTCACTCCTCTATGCAAAATTTTCACTGAATCTTaGGTCAAGCGAAAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VIEPSVQLNFLSFTPLCKIFTES*VKRKAL Trigger: AAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAAT...TTTGCATAGAGGAGTGAATGACAGGAAATTAAGTTGGACACTTGGTTCGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000413331.1 |
||
| CDS TCA 72 bp | GCATTGAAGGCAATGAATTCCATCACGGGGGTTATATaGTCCAGGGCTGCAGATCACACAGCACTCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALKAMNSITGVI*SRAADHTALRT Trigger: TGTCCTGAGTGCTGTGTGATCTGCAGCCCTGGATCATATAACCCCCGTGATGGAATTCATTGCCTTCAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS TCA 72 bp | GTGCGTAACAACTCTGCCTCTGCTTTCCCAGGCTGTTaGTGGGGTGCTGTTCATGCCTCAGAAAAATGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VRNNSASAFPGC*WGAVHASEKCI Trigger: AATGCATTTTTCTGAGGCATGAACAGCACCCCATCAACAGCCTGGGAAAGCAGAGGCAGAGTTGTTACGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465922.1 |
||
| CDS CAA 90 bp | TTGATCCCACTATTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTaGGTAATCGAACCAAGTGTCCAACTGATGAGGGCACCCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LIPLFSLNLWSSEKL*VIEPSVQLMRAPAP Trigger: TGGTGCGGGTGCCCTCATCAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAGTGGGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS GCA 72 bp | CAACTCTGCCTCTGCTTTCCCAGGCTGTTGATGGGGTaGTGTTCATGCCTCAGAAAAATGCATTGTAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: QLCLCFPRLLMG*CSCLRKMHCKL Trigger: TAACTTACAATGCATTTTTCTGAGGCATGAACAGCACCCCATCAACAGCCTGGGAAAGCAGAGGCAGAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465922.1 |
||
| CDS TCA 72 bp | TTCATCTCCTCTTATCTGGGGTCACATATCTCTTCGTaGTTGCATTCTGATCCCCAGTACTTAGCATGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FISSYLGSHISS*LHSDPQYLACA Trigger: CGCACATGCTAAGTACTGGGGATCAGAATGCAATCACGAAGAGATATGTGACCCCAGATAAGAGGAGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465922.1 |
||
| CDS GCA 72 bp | TGGCTTATAAGCACGTTTTTGCTCCATACACCAGGCTaGTATTGCATTGAAGGCAATGAATTCCATCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLISTFLLHTPG*YCIEGNEFHHG Trigger: CCCGTGATGGAATTCATTGCCTTCAATGCAATAGCAGCCTGGTGTATGGAGCAAAAACGTGCTTATAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000046087.7 |
||
| CDS CAA 90 bp | CATAGTGGAAGTCCCAACTACACAGCACTCAGGACATTTTGGATGTaGCTGGACATTCATTCCATATCCTGGAAAGCAGCGATTAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HSGSPNYTALRTFWM*LDIHSISWKAAINP Trigger: TGGATTAATCGCTGCTTTCCAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTGTAGTTGGGACTTCCACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491129.5 |
||
| CDS TCA 72 bp | TTATCTGGGGTCACATATCTCTTCGTGATTGCATTCTaGTCCCCAGTACTTAGCATGTGCGTAACAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGVTYLFVIAF*SPVLSMCVTTL Trigger: CAGAGTTGTTACGCACATGCTAAGTACTGGGGATCAGAATGCAATCACGAAGAGATATGTGACCCCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465922.1 |
||
| CDS GCA 72 bp | ATAAGCACGTTTTTGCTCCATACACCAGGCTGCTATTaGATTGAAGGCAATGAATTCCATCACGGGGGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ISTFLLHTPGCY*IEGNEFHHGGY Trigger: ATAACCCCCGTGATGGAATTCATTGCCTTCAATGCAATAGCAGCCTGGTGTATGGAGCAAAAACGTGCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS CCA 72 bp | AGTGGAAGTCCCAACTACACAGCACTCAGGACATTTTaGATGTTGCTGGACATTCATTCCATATCCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSPNYTALRTF*MLLDIHSISWK Trigger: TTTCCAGGATATGGAATGAATGTCCAGCAACATCCAAAATGTCCTGAGTGCTGTGTAGTTGGGACTTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491129.5 |
||
| CDS CAA 72 bp | CTATTTTCACTGAATCTTTGGTCAAGCGAAAAGCTCTaGGTAATCGAACCAAGTGTCCAACTGATGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LFSLNLWSSEKL*VIEPSVQLMRA Trigger: TGCCCTCATCAGTTGGACACTTGGTTCGATTACCAAGAGCTTTTCGCTTGACCAAAGATTCAGTGAAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS TCA 72 bp | TTACACATAACACGTGTGGACTCTTTTGATGGAGCATaGCATACGCTTTCACTGGAAAACTTGTTGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LHITRVDSFDGA*HTLSLENLLIP Trigger: TGGGATCAACAAGTTTTCCAGTGAAAGCGTATGTCATGCTCCATCAAAAGAGTCCACACGTGTTATGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000046087.7 ENST00000419417.5 ENST00000450231.1 |
||
| CDS TCA 72 bp | AGTTGTTGCGTTACACATAACACGTGTGGACTCTTTTaGTGGAGCATGACATACGCTTTCACTGGAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SCCVTHNTCGLF*WSMTYAFTGKL Trigger: AAGTTTTCCAGTGAAAGCGTATGTCATGCTCCATCAAAAGAGTCCACACGTGTTATGTGTAACGCAACAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000046087.7 ENST00000419417.5 ENST00000450231.1 |
||
| CDS CCA 72 bp | TCTACTGAAACAACTTTTCCTTTAGGCCCATACCATTaGAATGATGGGTCTATCAGTTCAGCATTTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STETTFPLGPYH*NDGSISSAFRS Trigger: ACTGCGAAATGCTGAACTGATAGACCCATCATTCCAATGGTATGGGCCTAAAGGAAAAGTTGTTTCAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000046087.7 |
||
| CDS CCA 72 bp | TTTTCTGAAACAACTTTTCCTTTAGGCCCATACCATTaGAATGATGGGTCTATCAGTTCAGCATTTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSETTFPLGPYH*NDGSISSAFRS Trigger: ACTGCGAAATGCTGAACTGATAGACCCATCATTCCAATGGTATGGGCCTAAAGGAAAAGTTGTTTCAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419417.5 |
||
| CDS CAA 90 bp | TTCGAGGAAACATGTATAAATTCCACTCATACTCTCCTCAAAATTTaGGAATACAAGGCTTCCTGTGGATGTTATTTGTGCAGTGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FEETCINSTHTLLKI*EYKASCGCYLCSAV Trigger: AACCGCACTGCACAAATAACATCCACAGGAAGCCTTGTATTCCAAAATTTTGAGGAGAGTATGAGTGGAATTTATACATGTTTCCTCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS CCA 72 bp | TTTTGTAAGGTTCACAGTTATGGTCTGTACATCGCTTaGGTCCTTTTTCAGTGTCTAGAGATGAAACTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FCKVHSYGLYIA*VLFQCLEMKLK Trigger: TTTCAGTTTCATCTCTAGACACTGAAAAAGGACCCAAGCGATGTACAGACCATAACTGTGAACCTTACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS CCA 72 bp | TCATTTTGCAAACCAGCTCTTTGCATTTTAACGCGATaGCATTCAGACTTAAGTAAGGAAATTTCACATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SFCKPALCILTR*HSDLSKEISHE Trigger: TTCATGTGAAATTTCCTTACTTAAGTCTGAATGCCATCGCGTTAAAATGCAAAGAGCTGGTTTGCAAAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000046087.7 ENST00000419417.5 |
||
| CDS TCA 72 bp | TTTAGCCTTATGGCTCTGGAGATCAGAAATCCAAAATaGGTCTTACTAAGCAAAAATCAAGCTGTATTCATT | + |
|
Preference number: 6 (lower is better) Translates to: FSLMALEIRNPK*VLLSKNQAVFI Trigger: AATGAATACAGCTTGATTTTTGCTTAGTAAGACTCATTTTGGATTTCTGATCTCCAGAGCCATAAGGCTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491129.5 |
||