RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103310, ENSG00000284588

Ensembl transcript IDs: ENST00000572752.1, ENST00000573114.1, ENST00000574002.1, ENST00000574091.6, ENST00000576162.5, ENST00000638300.1, ENST00000639836.1, ENST00000640213.1, ENST00000640487.3, ENST00000640539.1

Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CCAGCTGAAACGGAAGGATTGGGGAAGGAAGTGGCCTCTGATTCCTaGCAGCTTGCGCCGGGTATTCTGCCAGCTGCCCTAACCCAGACC +
Preference number: 5 (lower is better)
Translates to: PAETEGLGKEVASDS*QLAPGILPAALTQT
Trigger: GGTCTGGGTTAGGGCAGCTGGCAGAATACCCGGCGCAAGCTGTCAGGAATCAGAGGCCACTTCCTTCCCCAATCCTTCCGTTTCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CCA 90 bp CCCAGACCTGTGGTGTGCTGGGGACAGCCACCGAACAAATGGCTCTaGGCCCAGGAGCATCCATGTCTAGGATTCTGCTCCGGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: PRPVVCWGQPPNKWL*AQEHPCLGFCSGKA
Trigger: TGCTTTTCCGGAGCAGAATCCTAGACATGGATGCTCCTGGGCCCAGAGCCATTTGTTCGGTGGCTGTCCCCAGCACACCACAGGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS TCA 90 bp GAGAGAAATCGACCTGTAGGTGCTCCAGCCTGCATTGAACCAGCCTaGGGGACTCCAAGAGCCTCCTCTCTGCCTGCACGCCATAGCAGA +
Preference number: 5 (lower is better)
Translates to: ERNRPVGAPACIEPA*GTPRASSLPARHSR
Trigger: TCTGCTATGGCGTGCAGGCAGAGAGGAGGCTCTTGGAGTCCCTCAGGCTGGTTCAATGCAGGCTGGAGCACCTACAGGTCGATTTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640539.1
CDS CCA 90 bp CCATGCTGGGTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATaGGAGTTGGATGCCGTTGCTGCAGGAGTTTGGGTACTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PCWVASCKSGIPMAS*ELDAVAAGVWVLCS
Trigger: GGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp ATCCCCATGGCATCATGGGAGTTGGATGCCGTTGCTGCAGGAGTTTaGGTACTCTGCTCCCCAAACAGGATTGACCTAAGCCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: IPMASWELDAVAAGV*VLCSPNRIDLSQRL
Trigger: CAGCCTTTGGCTTAGGTCAATCCTGTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp GGGTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATGGGAGTTaGATGCCGTTGCTGCAGGAGTTTGGGTACTCTGCTCCCCAAACA +
Preference number: 5 (lower is better)
Translates to: GWLHANQVSPWHHGS*MPLLQEFGYSAPQT
Trigger: TGTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp CAGGTCTTCCATGCTGGGTGGCTTCATGCAAATCAGGTATCCCCATaGCATCATGGGAGTTGGATGCCGTTGCTGCAGGAGTTTGGGTAC +
Preference number: 5 (lower is better)
Translates to: QVFHAGWLHANQVSP*HHGSWMPLLQEFGY
Trigger: GTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS TCA 90 bp CAGTCCCTTCACTTCCGCCCCAACTCAGTGATAGAACTTGAGCTTTaGGATGGTATGACTTGCAGCCAGAGGCTTCCCAGAGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: QSLHFRPNSVIELEL*DGMTCSQRLPRDAG
Trigger: GCCAGCATCTCTGGGAAGCCTCTGGCTGCAAGTCATACCATCTCAAAGCTCAAGTTCTATCACTGAGTTGGGGCGGAAGTGAAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp GATAGTGATCAGGATGGGTCACAGAGGAGCCGACTGGATGGAAGGTaGTCTGGTAGTTGTCCAGGTCATATGCACAGCCATCCACGACAA +
Preference number: 5 (lower is better)
Translates to: DSDQDGSQRSRLDGR*SGSCPGHMHSHPRQ
Trigger: TTGTCGTGGATGGCTGTGCATATGACCTGGACAACTACCAGACCACCTTCCATCCAGTCGGCTCCTCTGTGACCCATCCTGATCACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CCA 90 bp GTCAAACCTCTGATAGTGATCAGGATGGGTCACAGAGGAGCCGACTaGATGGAAGGTGGTCTGGTAGTTGTCCAGGTCATATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: VKPLIVIRMGHRGAD*MEGGLVVVQVICTA
Trigger: GGCTGTGCATATGACCTGGACAACTACCAGACCACCTTCCATCCAGTCGGCTCCTCTGTGACCCATCCTGATCACTATCAGAGGTTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS GCA 90 bp GAAGCCTTCCTTCATGGCCTCTGGCAGGGTCAGAGTTTTGGCTCTTaGACCATCACCAACCTCAATGCTCCATCCCATCTGAACTTTGGT +
Preference number: 5 (lower is better)
Translates to: EAFLHGLWQGQSFGS*TITNLNAPSHLNFG
Trigger: ACCAAAGTTCAGATGGGATGGAGCATTGAGGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGGAAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS GCA 90 bp GCATCATGGGAGTTGGATGCCGTTGCTGCAGGAGTTTGGGTACTCTaGTCCCCAAACAGGATTGACCTAAGCCAAAGGCTGTCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: ASWELDAVAAGVWVL*SPNRIDLSQRLSAN
Trigger: ATTAGCAGACAGCCTTTGGCTTAGGTCAATCCTGTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS GCA 90 bp GTCCAGGATGTAAGTGCAGTTCGGCATGTCGAGACCAAGAGGATCTaGCAAGGCCAGAGCAGGTTAGACAGGATGGCTGAGTACATTTCA +
Preference number: 5 (lower is better)
Translates to: VQDVSAVRHVETKRI*QGQSRLDRMAEYIS
Trigger: TGAAATGTACTCAGCCATCCTGTCTAACCTGCTCTGGCCTTGGCAGATCCTCTTGGTCTCGACATGCCGAACTGCACTTACATCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp TCTCCTGGTACAGTTATCATAGGTAGCCCTCAGGGTGAGCTTTTCTaGGTCCAGGATGTAAGTGCAGTTCGGCATGTCGAGACCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SPGTVIIGSPQGELF*VQDVSAVRHVETKR
Trigger: CCTCTTGGTCTCGACATGCCGAACTGCACTTACATCCTGGACCCAGAAAAGCTCACCCTGAGGGCTACCTATGATAACTGTACCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS TCA 90 bp CTGGATCCATGGTGGACGTCGCCCAGCAGTCATCTAAGACCAGCTTaGTGTTGGGGTCATCCCTGTTTAGGACTCTCACTTCCATGTAAA +
Preference number: 5 (lower is better)
Translates to: LDPWWTSPSSHLRPA*CWGHPCLGLSLPCK
Trigger: TTTACATGGAAGTGAGAGTCCTAAACAGGGATGACCCCAACATCAAGCTGGTCTTAGATGACTGCTGGGCGACGTCCACCATGGATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS TCA 90 bp GGTACTTCAGTCCCTTCACTTCCGCCCCAACTCAGTGATAGAACTTaGGCTTTGAGATGGTATGACTTGCAGCCAGAGGCTTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GTSVPSLPPQLSDRT*ALRWYDLQPEASQR
Trigger: TCTCTGGGAAGCCTCTGGCTGCAAGTCATACCATCTCAAAGCTCAAGTTCTATCACTGAGTTGGGGCGGAAGTGAAGGGACTGAAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS GCA 90 bp TGTCGAGACCAAGAGGATCCACCACAGATGCATGCCATTTCTTGGTaGCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCATCGC +
Preference number: 5 (lower is better)
Translates to: CRDQEDPPQMHAISW*QDCLGTPLLFPFHR
Trigger: GCGATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGATCCTCTTGGTCTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS GCA 90 bp ACACACTTTCGAAGACAGACAGGTCTTCCATGCTGGGTGGCTTCATaGAAATCAGGTATCCCCATGGCATCATGGGAGTTGGATGCCGTT +
Preference number: 5 (lower is better)
Translates to: THFRRQTGLPCWVAS*KSGIPMASWELDAV
Trigger: AACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp GGCATAAGACACACTTTCGAAGACAGACAGGTCTTCCATGCTGGGTaGCTTCATGCAAATCAGGTATCCCCATGGCATCATGGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GIRHTFEDRQVFHAG*LHANQVSPWHHGSW
Trigger: CCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTGTCTTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp TGCTGGCATAAGACACACTTTCGAAGACAGACAGGTCTTCCATGCTaGGTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATGGGAG +
Preference number: 5 (lower is better)
Translates to: CWHKTHFRRQTGLPC*VASCKSGIPMASWE
Trigger: CTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTGTCTTATGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS TCA 90 bp GGCACTGCAGTGGAAGTAGACCAGGCTAGAGAGCACGTGGGCTTCTaGTACAAAGGCAAAAGCCTTCATGTCAAACCTCTGATAGTGATC +
Preference number: 5 (lower is better)
Translates to: GTAVEVDQAREHVGF*YKGKSLHVKPLIVI
Trigger: GATCACTATCAGAGGTTTGACATGAAGGCTTTTGCCTTTGTATCAGAAGCCCACGTGCTCTCTAGCCTGGTCTACTTCCACTGCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS GCA 90 bp AGATGCTGGCATAAGACACACTTTCGAAGACAGACAGGTCTTCCATaGTGGGTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATGG +
Preference number: 5 (lower is better)
Translates to: RCWHKTHFRRQTGLP*WVASCKSGIPMASW
Trigger: CCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTGTCTTATGCCAGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp GCATGTCGAGACCAAGAGGATCCACCACAGATGCATGCCATTTCTTaGTGCCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: ACRDQEDPPQMHAIS*CQDCLGTPLLFPFH
Trigger: ATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGATCCTCTTGGTCTCGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 90 bp CTGTTATGTTGGCAATTAGAGCTCACGGGCAAGTTATCAGCCGTATaGGGACTACCCACAAGAGTATACTTCAAGTCAGGACCCGGTGGA +
Preference number: 5 (lower is better)
Translates to: LLCWQLELTGKLSAV*GLPTRVYFKSGPGG
Trigger: TCCACCGGGTCCTGACTTGAAGTATACTCTTGTGGGTAGTCCTCATACGGCTGATAACTTGCCCGTGAGCTCTAATTGCCAACATAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS GCA 90 bp ATAACACACGTTACCTACCCACCACAGATGCATGCCATTTCTTGGTaGCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCATCGC +
Preference number: 5 (lower is better)
Translates to: ITHVTYPPQMHAISW*QDCLGTPLLFPFHR
Trigger: GCGATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTGTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS TCA 90 bp CTTTCATCGCAAGTGACAGTGCCTGGAAAGGCAGGATTTACCAACTaGGAAACATCTATGGAGTTCCCTGAAGTCACAAGGGCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LSSQVTVPGKAGFTN*ETSMEFPEVTRAKK
Trigger: CTTCTTCGCCCTTGTGACTTCAGGGAACTCCATAGATGTTTCTCAGTTGGTAAATCCTGCCTTTCCAGGCACTGTCACTTGCGATGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS TCA 90 bp AGAGATGACTGTTACCTTGCACATAGTGAGTCACTCCAGTGGCATTaGATGGCACATGGAAGGTCATCCTGTGGTTGTCAATCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: RDDCYLAHSESLQWH*MAHGRSSCGCQSRG
Trigger: GCCTCTTGATTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCACTGGAGTGACTCACTATGTGCAAGGTAACAGTCATCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CCA 90 bp GAGATAACACACGTTACCTACCCACCACAGATGCATGCCATTTCTTaGTGCCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: EITHVTYPPQMHAIS*CQDCLGTPLLFPFH
Trigger: ATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTGTGTTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 90 bp ATGACTGTTACCTTGCACATAGTGAGTCACTCCAGTGGCATTGAATaGCACATGGAAGGTCATCCTGTGGTTGTCAATCAAGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: MTVTLHIVSHSSGIE*HMEGHPVVVNQEAE
Trigger: TTCAGCCTCTTGATTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCACTGGAGTGACTCACTATGTGCAAGGTAACAGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 90 bp TGGCAAGGAAAAAGACATGAAATCCTTCTGGCAGATTGTAGATGCTaGAAGCCCCTGGGTCTCTTCTACTTGCATAGCTGGACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: WQGKRHEILLADCRC*KPLGLFYLHSWTEE
Trigger: TTCTTCTGTCCAGCTATGCAAGTAGAAGAGACCCAGGGGCTTTCAGCATCTACAATCTGCCAGAAGGATTTCATGTCTTTTTCCTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS TCA 90 bp AGATCACCATGGATACTGTCTCTGGCCGAAGGAGAAAGGTCAGCTTaGGTGAAGCTAAGTAGAACTGATGGAGTAGGCATTTTTCAGATA +
Preference number: 5 (lower is better)
Translates to: RSPWILSLAEGERSA*VKLSRTDGVGIFQI
Trigger: TATCTGAAAAATGCCTACTCCATCAGTTCTACTTAGCTTCACTCAAGCTGACCTTTCTCCTTCGGCCAGAGACAGTATCCATGGTGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CCA 90 bp CTACCCACAAGAGTATACTTCAAGTCAGGACCCGGTGGAGTTCAGTaGTTGACAATTGAACATACTTTCGTTTTGAGCAGAGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LPTRVYFKSGPGGVQ*LTIEHTFVLSRVLL
Trigger: CAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCCTGACTTGAAGTATACTCTTGTGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS TCA 90 bp CTTAAATGTCAGAGAAAGTGGGTTAGCAGCCAGTTATGTCAAAGATaGGACTTAACCTCGTGCCATCTGCCAGTACTAACCTTATATCTC +
Preference number: 5 (lower is better)
Translates to: LKCQRKWVSSQLCQR*DLTSCHLPVLTLYL
Trigger: GAGATATAAGGTTAGTACTGGCAGATGGCACGAGGTTAAGTCTCATCTTTGACATAACTGGCTGCTAACCCACTTTCTCTGACATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573114.1
ENST00000639836.1
CDS GCA 90 bp TGCAATTTCATGCCATTTGTTGCTTCTAGATCAATTCCATTGTCATaGAGCTGGCTCACATCAATGTTCTGGTTTTCAAAGCTCACAGAC +
Preference number: 5 (lower is better)
Translates to: CNFMPFVASRSIPLS*SWLTSMFWFSKLTD
Trigger: GTCTGTGAGCTTTGAAAACCAGAACATTGATGTGAGCCAGCTGCATGACAATGGAATTGATCTAGAAGCAACAAATGGCATGAAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 90 bp AGTATACTTCAAGTCAGGACCCGGTGGAGTTCAGTGGTTGACAATTaGACATACTTTCGTTTTGAGCAGAGTTTTGCTGAAATGCAATTT +
Preference number: 5 (lower is better)
Translates to: SILQVRTRWSSVVDN*TYFRFEQSFAEMQF
Trigger: AAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCCTGACTTGAAGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CCA 72 bp GCCGGGTATTCTGCCAGCTGCCCTAACCCAGACCTGTaGTGTGCTGGGGACAGCCACCGAACAAATGGCTCT +
Preference number: 6 (lower is better)
Translates to: AGYSASCPNPDL*CAGDSHRTNGS
Trigger: AGAGCCATTTGTTCGGTGGCTGTCCCCAGCACACCACAGGTCTGGGTTAGGGCAGCTGGCAGAATACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CCA 72 bp GTGGTGTGCTGGGGACAGCCACCGAACAAATGGCTCTaGGCCCAGGAGCATCCATGTCTAGGATTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: VVCWGQPPNKWL*AQEHPCLGFCS
Trigger: GGAGCAGAATCCTAGACATGGATGCTCCTGGGCCCAGAGCCATTTGTTCGGTGGCTGTCCCCAGCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CAA 90 bp GCAGCCACAGCAGCCACAGCTTTGGAACCAACATCTCCAGCAGTCTaGTGCCCTTTGGTGTCCATAGCACCTCGTGAGCCAACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AATAATALEPTSPAV*CPLVSIAPREPTSS
Trigger: GGAGGAGGTTGGCTCACGAGGTGCTATGGACACCAAAGGGCACAAGACTGCTGGAGATGTTGGTTCCAAAGCTGTGGCTGCTGTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CCA 72 bp AGACCTGTGGTGTGCTGGGGACAGCCACCGAACAAATaGCTCTGGGCCCAGGAGCATCCATGTCTAGGATTC +
Preference number: 6 (lower is better)
Translates to: RPVVCWGQPPNK*LWAQEHPCLGF
Trigger: GAATCCTAGACATGGATGCTCCTGGGCCCAGAGCCATTTGTTCGGTGGCTGTCCCCAGCACACCACAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CCA 72 bp CGACAACGTTCCACTGGGGGAAAGAGTCTGGATCCATaGTGGACGTCGCCCAGCAGTCATCTAAGACCAGCT +
Preference number: 6 (lower is better)
Translates to: RQRSTGGKSLDP*WTSPSSHLRPA
Trigger: AGCTGGTCTTAGATGACTGCTGGGCGACGTCCACCATGGATCCAGACTCTTTCCCCCAGTGGAACGTTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CCA 72 bp AGGTCATATGCACAGCCATCCACGACAACGTTCCACTaGGGGAAAGAGTCTGGATCCATGGTGGACGTCGCC +
Preference number: 6 (lower is better)
Translates to: RSYAQPSTTTFH*GKESGSMVDVA
Trigger: GGCGACGTCCACCATGGATCCAGACTCTTTCCCCCAGTGGAACGTTGTCGTGGATGGCTGTGCATATGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS GCA 72 bp GCCACAGCTTTGGAACCAACATCTCCAGCAGTCTTGTaGCCTTTGGTGTCCATAGCACCTCGTGAGCCAACC +
Preference number: 6 (lower is better)
Translates to: ATALEPTSPAVL*PLVSIAPREPT
Trigger: GGTTGGCTCACGAGGTGCTATGGACACCAAAGGGCACAAGACTGCTGGAGATGTTGGTTCCAAAGCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS GCA 72 bp TGGCTCTGGGCCCAGGAGCATCCATGTCTAGGATTCTaGTCCGGAAAAGCAGGAAGCTACCATCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: WLWAQEHPCLGF*SGKAGSYHLFS
Trigger: GCTGAACAGATGGTAGCTTCCTGCTTTTCCGGAGCAGAATCCTAGACATGGATGCTCCTGGGCCCAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS GCA 72 bp CAAATCAGGTATCCCCATGGCATCATGGGAGTTGGATaGCGTTGCTGCAGGAGTTTGGGTACTCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: QIRYPHGIMGVG*RCCRSLGTLLP
Trigger: GGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp CAGGATGGGTCACAGAGGAGCCGACTGGATGGAAGGTaGTCTGGTAGTTGTCCAGGTCATATGCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: QDGSQRSRLDGR*SGSCPGHMHSH
Trigger: ATGGCTGTGCATATGACCTGGACAACTACCAGACCACCTTCCATCCAGTCGGCTCCTCTGTGACCCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CAA 72 bp GCTTTGGAACCAACATCTCCAGCAGTCTTGTGCCCTTaGGTGTCCATAGCACCTCGTGAGCCAACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALEPTSPAVLCP*VSIAPREPTSS
Trigger: GGAGGAGGTTGGCTCACGAGGTGCTATGGACACCAAAGGGCACAAGACTGCTGGAGATGTTGGTTCCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CAA 72 bp GCAGCCACAGCTTTGGAACCAACATCTCCAGCAGTCTaGTGCCCTTTGGTGTCCATAGCACCTCGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: AATALEPTSPAV*CPLVSIAPREP
Trigger: TGGCTCACGAGGTGCTATGGACACCAAAGGGCACAAGACTGCTGGAGATGTTGGTTCCAAAGCTGTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CAA 90 bp TGGGTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATGGGAGTaGGATGCCGTTGCTGCAGGAGTTTGGGTACTCTGCTCCCCAAAC +
Preference number: 6 (lower is better)
Translates to: WVASCKSGIPMASWE*DAVAAGVWVLCSPN
Trigger: GTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS GCA 72 bp CTTCATGGCCTCTGGCAGGGTCAGAGTTTTGGCTCTTaGACCATCACCAACCTCAATGCTCCATCCCATCTG +
Preference number: 6 (lower is better)
Translates to: LHGLWQGQSFGS*TITNLNAPSHL
Trigger: CAGATGGGATGGAGCATTGAGGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS GCA 72 bp GAGTTGGATGCCGTTGCTGCAGGAGTTTGGGTACTCTaGTCCCCAAACAGGATTGACCTAAGCCAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: ELDAVAAGVWVL*SPNRIDLSQRL
Trigger: CAGCCTTTGGCTTAGGTCAATCCTGTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp AGCCTTCCTTCATGGCCTCTGGCAGGGTCAGAGTTTTaGCTCTTGCACCATCACCAACCTCAATGCTCCATC +
Preference number: 6 (lower is better)
Translates to: SLPSWPLAGSEF*LLHHHQPQCSI
Trigger: GATGGAGCATTGAGGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CCA 72 bp GTCAATCAAGAGGCTGAAGCCTTCCTTCATGGCCTCTaGCAGGGTCAGAGTTTTGGCTCTTGCACCATCACC +
Preference number: 6 (lower is better)
Translates to: VNQEAEAFLHGL*QGQSFGSCTIT
Trigger: GGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGGAAGGCTTCAGCCTCTTGATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CCA 72 bp GCATCATGGGAGTTGGATGCCGTTGCTGCAGGAGTTTaGGTACTCTGCTCCCCAAACAGGATTGACCTAAGC +
Preference number: 6 (lower is better)
Translates to: ASWELDAVAAGV*VLCSPNRIDLS
Trigger: GCTTAGGTCAATCCTGTTTGGGGAGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CAA 72 bp CCTTCATGGCCTCTGGCAGGGTCAGAGTTTTGGCTCTaGCACCATCACCAACCTCAATGCTCCATCCCATCT +
Preference number: 6 (lower is better)
Translates to: PSWPLAGSEFWL*HHHQPQCSIPS
Trigger: AGATGGGATGGAGCATTGAGGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 72 bp CTTGCACCATCACCAACCTCAATGCTCCATCCCATCTaGACTTTGGTCCCCTTACTGTCGTCAGCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: LAPSPTSMLHPI*TLVPLLSSAKP
Trigger: TGGCTTGGCTGACGACAGTAAGGGGACCAAAGTTCAGATGGGATGGAGCATTGAGGTTGGTGATGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 72 bp TGGTGGACGTCGCCCAGCAGTCATCTAAGACCAGCTTaGTGTTGGGGTCATCCCTGTTTAGGACTCTCACTT +
Preference number: 6 (lower is better)
Translates to: WWTSPSSHLRPA*CWGHPCLGLSL
Trigger: AAGTGAGAGTCCTAAACAGGGATGACCCCAACATCAAGCTGGTCTTAGATGACTGCTGGGCGACGTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS GCA 72 bp GGAGATAACACACGTTACCTACCCACCACAGATGCATaGCATTTCTTGGTGCCAGGACTGCTTGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: GDNTRYLPTTDA*HFLVPGLLGNS
Trigger: GGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTGTGTTATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS GCA 72 bp CGAAGACAGACAGGTCTTCCATGCTGGGTGGCTTCATaGAAATCAGGTATCCCCATGGCATCATGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: RRQTGLPCWVAS*KSGIPMASWEL
Trigger: CAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp CGGGTGACTCACAGAGACACTCAGGATAGATCACCATaGATACTGTCTCTGGCCGAAGGAGAAAGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: RVTHRDTQDRSP*ILSLAEGERSA
Trigger: AGCTGACCTTTCTCCTTCGGCCAGAGACAGTATCCATGGTGATCTATCCTGAGTGTCTCTGTGAGTCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CCA 72 bp CATGCAAATCAGGTATCCCCATGGCATCATGGGAGTTaGATGCCGTTGCTGCAGGAGTTTGGGTACTCTGCT +
Preference number: 6 (lower is better)
Translates to: HANQVSPWHHGS*MPLLQEFGYSA
Trigger: AGCAGAGTACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp GTGGCTTCATGCAAATCAGGTATCCCCATGGCATCATaGGAGTTGGATGCCGTTGCTGCAGGAGTTTGGGTA +
Preference number: 6 (lower is better)
Translates to: VASCKSGIPMAS*ELDAVAAGVWV
Trigger: TACCCAAACTCCTGCAGCAACGGCATCCAACTCCCATGATGCCATGGGGATACCTGATTTGCATGAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CAA 72 bp AAGCCTTCCTTCATGGCCTCTGGCAGGGTCAGAGTTTaGGCTCTTGCACCATCACCAACCTCAATGCTCCAT +
Preference number: 6 (lower is better)
Translates to: KPSFMASGRVRV*ALAPSPTSMLH
Trigger: ATGGAGCATTGAGGTTGGTGATGGTGCAAGAGCCAAAACTCTGACCCTGCCAGAGGCCATGAAGGAAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CAA 72 bp GACGTCGCCCAGCAGTCATCTAAGACCAGCTTGATGTaGGGGTCATCCCTGTTTAGGACTCTCACTTCCATG +
Preference number: 6 (lower is better)
Translates to: DVAQQSSKTSLM*GSSLFRTLTSM
Trigger: CATGGAAGTGAGAGTCCTAAACAGGGATGACCCCAACATCAAGCTGGTCTTAGATGACTGCTGGGCGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CAA 72 bp ATGGTGGACGTCGCCCAGCAGTCATCTAAGACCAGCTaGATGTTGGGGTCATCCCTGTTTAGGACTCTCACT +
Preference number: 6 (lower is better)
Translates to: MVDVAQQSSKTS*MLGSSLFRTLT
Trigger: AGTGAGAGTCCTAAACAGGGATGACCCCAACATCAAGCTGGTCTTAGATGACTGCTGGGCGACGTCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS CAA 90 bp GGCATGTCGAGACCAAGAGGATCCACCACAGATGCATGCCATTTCTaGGTGCCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: GMSRPRGSTTDACHF*VPGLLGNSTVISLS
Trigger: TGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGATCCTCTTGGTCTCGACATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 72 bp CACTTCCGCCCCAACTCAGTGATAGAACTTGAGCTTTaGGATGGTATGACTTGCAGCCAGAGGCTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: HFRPNSVIELEL*DGMTCSQRLPR
Trigger: TCTGGGAAGCCTCTGGCTGCAAGTCATACCATCTCAAAGCTCAAGTTCTATCACTGAGTTGGGGCGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS TCA 72 bp GTCCCTTCACTTCCGCCCCAACTCAGTGATAGAACTTaGGCTTTGAGATGGTATGACTTGCAGCCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VPSLPPQLSDRT*ALRWYDLQPEA
Trigger: AGCCTCTGGCTGCAAGTCATACCATCTCAAAGCTCAAGTTCTATCACTGAGTTGGGGCGGAAGTGAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS GCA 72 bp CAAGAGGATCCACCACAGATGCATGCCATTTCTTGGTaGCAGGACTGCTTGGGAACTCCACTGTTATTTCCC +
Preference number: 6 (lower is better)
Translates to: QEDPPQMHAISW*QDCLGTPLLFP
Trigger: GGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGATCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS GCA 72 bp GTTACCTACCCACCACAGATGCATGCCATTTCTTGGTaGCAGGACTGCTTGGGAACTCCACTGTTATTTCCC +
Preference number: 6 (lower is better)
Translates to: VTYPPQMHAISW*QDCLGTPLLFP
Trigger: GGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CAA 72 bp GTGGCATTGAATGGCACATGGAAGGTCATCCTGTGGTaGTCAATCAAGAGGCTGAAGCCTTCCTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: VALNGTWKVILW*SIKRLKPSFMA
Trigger: GGCCATGAAGGAAGGCTTCAGCCTCTTGATTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS GCA 72 bp AGATGGTATGACTTGCAGCCAGAGGCTTCCCAGAGATaGTGGCATAAGACACACTTTCGAAGACAGACAGGT +
Preference number: 6 (lower is better)
Translates to: RWYDLQPEASQR*WHKTHFRRQTG
Trigger: ACCTGTCTGTCTTCGAAAGTGTGTCTTATGCCAGCATCTCTGGGAAGCCTCTGGCTGCAAGTCATACCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp GACCAAGAGGATCCACCACAGATGCATGCCATTTCTTaGTGCCAGGACTGCTTGGGAACTCCACTGTTATTT +
Preference number: 6 (lower is better)
Translates to: DQEDPPQMHAIS*CQDCLGTPLLF
Trigger: AAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGATCCTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CCA 72 bp CACGTTACCTACCCACCACAGATGCATGCCATTTCTTaGTGCCAGGACTGCTTGGGAACTCCACTGTTATTT +
Preference number: 6 (lower is better)
Translates to: HVTYPPQMHAIS*CQDCLGTPLLF
Trigger: AAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp CACACTTTCGAAGACAGACAGGTCTTCCATGCTGGGTaGCTTCATGCAAATCAGGTATCCCCATGGCATCAT +
Preference number: 6 (lower is better)
Translates to: HTFEDRQVFHAG*LHANQVSPWHH
Trigger: ATGATGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp AAGACACACTTTCGAAGACAGACAGGTCTTCCATGCTaGGTGGCTTCATGCAAATCAGGTATCCCCATGGCA +
Preference number: 6 (lower is better)
Translates to: KTHFRRQTGLPC*VASCKSGIPMA
Trigger: TGCCATGGGGATACCTGATTTGCATGAAGCCACCCAGCATGGAAGACCTGTCTGTCTTCGAAAGTGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CAA 72 bp CCACAGATGCATGCCATTTCTTGGTGCCAGGACTGCTaGGGAACTCCACTGTTATTTCCCTTTCATCGCAAG +
Preference number: 6 (lower is better)
Translates to: PQMHAISWCQDC*GTPLLFPFHRK
Trigger: CTTGCGATGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS CAA 72 bp ACACGTTACCTACCCACCACAGATGCATGCCATTTCTaGGTGCCAGGACTGCTTGGGAACTCCACTGTTATT +
Preference number: 6 (lower is better)
Translates to: TRYLPTTDACHF*VPGLLGNSTVI
Trigger: AATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CAA 90 bp GGAGATAACACACGTTACCTACCCACCACAGATGCATGCCATTTCTaGGTGCCAGGACTGCTTGGGAACTCCACTGTTATTTCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: GDNTRYLPTTDACHF*VPGLLGNSTVISLS
Trigger: TGAAAGGGAAATAACAGTGGAGTTCCCAAGCAGTCCTGGCACCAAGAAATGGCATGCATCTGTGGTGGGTAGGTAACGTGTGTTATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572752.1
ENST00000640539.1
CDS CCA 72 bp AAGGCAGCACTGTTGTTCATGACTCTGATGGTCATCTaGTGTCCACCATGCACTCTCCTGGTACAGTTATCA +
Preference number: 6 (lower is better)
Translates to: KAALLFMTLMVI*CPPCTLLVQLS
Trigger: TGATAACTGTACCAGGAGAGTGCATGGTGGACACCAGATGACCATCAGAGTCATGAACAACAGTGCTGCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS CAA 72 bp GGAAACTCTGGTATGGTGAGAGTCATGTGTGTGGCATaGCAGGTCACAGGATCTGGTGCACAAATAGCTTGT +
Preference number: 6 (lower is better)
Translates to: GNSGMVRVMCVA*QVTGSGAQIAC
Trigger: ACAAGCTATTTGTGCACCAGATCCTGTGACCTGCAATGCCACACACATGACTCTCACCATACCAGAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CAA 90 bp GGACCCAACTTCACTGAGGCCACTGGAGGAGTAAGGCTTTCAACGTaGATGTTTAGTAGCATGTCATTCCTGAACTCACTGTCTCTAGAT +
Preference number: 6 (lower is better)
Translates to: GPNFTEATGGVRLST*MFSSMSFLNSLSLD
Trigger: ATCTAGAGACAGTGAGTTCAGGAATGACATGCTACTAAACATCAACGTTGAAAGCCTTACTCCTCCAGTGGCCTCAGTGAAGTTGGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640487.3
CDS TCA 72 bp CAGAGAAAGTGGGTTAGCAGCCAGTTATGTCAAAGATaGGACTTAACCTCGTGCCATCTGCCAGTACTAACC +
Preference number: 6 (lower is better)
Translates to: QRKWVSSQLCQR*DLTSCHLPVLT
Trigger: GGTTAGTACTGGCAGATGGCACGAGGTTAAGTCTCATCTTTGACATAACTGGCTGCTAACCCACTTTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573114.1
ENST00000639836.1
CDS TCA 72 bp CAAGTGACAGTGCCTGGAAAGGCAGGATTTACCAACTaGGAAACATCTATGGAGTTCCCTGAAGTCACAAGG +
Preference number: 6 (lower is better)
Translates to: QVTVPGKAGFTN*ETSMEFPEVTR
Trigger: CCTTGTGACTTCAGGGAACTCCATAGATGTTTCTCAGTTGGTAAATCCTGCCTTTCCAGGCACTGTCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS TCA 72 bp TGTTACCTTGCACATAGTGAGTCACTCCAGTGGCATTaGATGGCACATGGAAGGTCATCCTGTGGTTGTCAA +
Preference number: 6 (lower is better)
Translates to: CYLAHSESLQWH*MAHGRSSCGCQ
Trigger: TTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCACTGGAGTGACTCACTATGTGCAAGGTAACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 72 bp TGGATACTGTCTCTGGCCGAAGGAGAAAGGTCAGCTTaGGTGAAGCTAAGTAGAACTGATGGAGTAGGCATT +
Preference number: 6 (lower is better)
Translates to: WILSLAEGERSA*VKLSRTDGVGI
Trigger: AATGCCTACTCCATCAGTTCTACTTAGCTTCACTCAAGCTGACCTTTCTCCTTCGGCCAGAGACAGTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000640487.3
CDS TCA 72 bp TGGCAATTAGAGCTCACGGGCAAGTTATCAGCCGTATaGGGACTACCCACAAGAGTATACTTCAAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: WQLELTGKLSAV*GLPTRVYFKSG
Trigger: TCCTGACTTGAAGTATACTCTTGTGGGTAGTCCTCATACGGCTGATAACTTGCCCGTGAGCTCTAATTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CCA 72 bp ACCTTGCACATAGTGAGTCACTCCAGTGGCATTGAATaGCACATGGAAGGTCATCCTGTGGTTGTCAATCAA +
Preference number: 6 (lower is better)
Translates to: TLHIVSHSSGIE*HMEGHPVVVNQ
Trigger: TTGATTGACAACCACAGGATGACCTTCCATGTGCCATTCAATGCCACTGGAGTGACTCACTATGTGCAAGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS TCA 72 bp AAAAGACATGAAATCCTTCTGGCAGATTGTAGATGCTaGAAGCCCCTGGGTCTCTTCTACTTGCATAGCTGG +
Preference number: 6 (lower is better)
Translates to: KRHEILLADCRC*KPLGLFYLHSW
Trigger: CCAGCTATGCAAGTAGAAGAGACCCAGGGGCTTTCAGCATCTACAATCTGCCAGAAGGATTTCATGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000572752.1
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
ENST00000640539.1
CDS GCA 72 bp GTTCAGCAACTGACTTTGAACACAGGAAGAAATAGCTaGTCCGTAAAACAGTGTCTCCTATCAGGAGGTAGG +
Preference number: 6 (lower is better)
Translates to: VQQLTLNTGRNS*SVKQCLLSGGR
Trigger: CCTACCTCCTGATAGGAGACACTGTTTTACGGAGCAGCTATTTCTTCCTGTGTTCAAAGTCAGTTGCTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CAA 72 bp TTCACTGAGGCCACTGGAGGAGTAAGGCTTTCAACGTaGATGTTTAGTAGCATGTCATTCCTGAACTCACTG +
Preference number: 6 (lower is better)
Translates to: FTEATGGVRLST*MFSSMSFLNSL
Trigger: CAGTGAGTTCAGGAATGACATGCTACTAAACATCAACGTTGAAAGCCTTACTCCTCCAGTGGCCTCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640487.3
CDS CAA 90 bp CCCACAAGAGTATACTTCAAGTCAGGACCCGGTGGAGTTCAGTGGTaGACAATTGAACATACTTTCGTTTTGAGCAGAGTTTTGCTGAAA +
Preference number: 6 (lower is better)
Translates to: PTRVYFKSGPGGVQW*TIEHTFVLSRVLLK
Trigger: TTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCCTGACTTGAAGTATACTCTTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CCA 72 bp AGAGTATACTTCAAGTCAGGACCCGGTGGAGTTCAGTaGTTGACAATTGAACATACTTTCGTTTTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: RVYFKSGPGGVQ*LTIEHTFVLSR
Trigger: TCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCCTGACTTGAAGTATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CCA 72 bp TCAAATGAGGCCTTTTGGAGTTTGAATCTGTTATGTTaGCAATTAGAGCTCACGGGCAAGTTATCAGCCGTA +
Preference number: 6 (lower is better)
Translates to: SNEAFWSLNLLC*QLELTGKLSAV
Trigger: TACGGCTGATAACTTGCCCGTGAGCTCTAATTGCCAACATAACAGATTCAAACTCCAAAAGGCCTCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CAA 72 bp AAAAGCAGGAAGCTACCATCTGTTCAGCAACTGACTTaGAACACAGGAAGAAATAGCTGCTCCGTAAAACAG +
Preference number: 6 (lower is better)
Translates to: KSRKLPSVQQLT*NTGRNSCSVKQ
Trigger: CTGTTTTACGGAGCAGCTATTTCTTCCTGTGTTCAAAGTCAGTTGCTGAACAGATGGTAGCTTCCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574002.1
ENST00000638300.1
CDS CAA 72 bp GTATACTTCAAGTCAGGACCCGGTGGAGTTCAGTGGTaGACAATTGAACATACTTTCGTTTTGAGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: VYFKSGPGGVQW*TIEHTFVLSRV
Trigger: AACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCCTGACTTGAAGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CAA 90 bp GGACCCGGTGGAGTTCAGTGGTTGACAATTGAACATACTTTCGTTTaGAGCAGAGTTTTGCTGAAATGCAATTTCATGCCATTTGTTGCT +
Preference number: 6 (lower is better)
Translates to: GPGGVQWLTIEHTFV*SRVLLKCNFMPFVA
Trigger: AGCAACAAATGGCATGAAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCCACCGGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CAA 72 bp AGCATGTCATTCCTGAACTCACTGTCTCTAGATATTTaGCTTGGAGGAAAATCCGTCCAGAGAGCATGTATT +
Preference number: 6 (lower is better)
Translates to: SMSFLNSLSLDI*LGGKSVQRACI
Trigger: AATACATGCTCTCTGGACGGATTTTCCTCCAAGCAAAATATCTAGAGACAGTGAGTTCAGGAATGACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640487.3
CDS CAA 90 bp CTGAAATGCAATTTCATGCCATTTGTTGCTTCTAGATCAATTCCATaGTCATGCAGCTGGCTCACATCAATGTTCTGGTTTTCAAAGCTC +
Preference number: 6 (lower is better)
Translates to: LKCNFMPFVASRSIP*SCSWLTSMFWFSKL
Trigger: GAGCTTTGAAAACCAGAACATTGATGTGAGCCAGCTGCATGACAATGGAATTGATCTAGAAGCAACAAATGGCATGAAATTGCATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CAA 72 bp TTCACTGTCATTCTGAACTCACTGTCTCTAGATATTTaGCTTGGAGGAAAATCCGTCCAGAGAGCATGTATT +
Preference number: 6 (lower is better)
Translates to: FTVILNSLSLDI*LGGKSVQRACI
Trigger: AATACATGCTCTCTGGACGGATTTTCCTCCAAGCAAAATATCTAGAGACAGTGAGTTCAGAATGACAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573114.1
ENST00000574002.1
ENST00000574091.6
ENST00000638300.1
ENST00000639836.1
CDS CAA 90 bp ATGTTTAGTAGCATGTCATTCCTGAACTCACTGTCTCTAGATATTTaGCTTGGAGGAAAATCCGTCCAGAGAGCATGTATTTCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: MFSSMSFLNSLSLDI*LGGKSVQRACISFS
Trigger: TGAAAACGAAATACATGCTCTCTGGACGGATTTTCCTCCAAGCAAAATATCTAGAGACAGTGAGTTCAGGAATGACATGCTACTAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640487.3
CDS CAA 72 bp AATTTCATGCCATTTGTTGCTTCTAGATCAATTCCATaGTCATGCAGCTGGCTCACATCAATGTTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: NFMPFVASRSIP*SCSWLTSMFWF
Trigger: AAACCAGAACATTGATGTGAGCCAGCTGCATGACAATGGAATTGATCTAGAAGCAACAAATGGCATGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000574002.1
ENST00000574091.6
ENST00000576162.5
ENST00000638300.1
ENST00000640213.1
ENST00000640487.3
CDS CAA 72 bp GGAGTTCAGTGGTTGACAATTGAACATACTTTCGTTTaGAGCAGAGTTTTGCTGAAATGCAATTTCATGCCA +
Preference number: 6 (lower is better)
Translates to: GVQWLTIEHTFV*SRVLLKCNFMP
Trigger: TGGCATGAAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CAA 90 bp GTTCAGTGGTTGACAATTGAACATACTTTCGTTTTGAGCAGAGTTTaGCTGAAATGCAATTTCATGCCATTTGTTGCTTCTAGATCAATT +
Preference number: 6 (lower is better)
Translates to: VQWLTIEHTFVLSRV*LKCNFMPFVASRSI
Trigger: AATTGATCTAGAAGCAACAAATGGCATGAAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAACCACTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1
CDS CAA 72 bp TTGACAATTGAACATACTTTCGTTTTGAGCAGAGTTTaGCTGAAATGCAATTTCATGCCATTTGTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LTIEHTFVLSRV*LKCNFMPFVAS
Trigger: AGAAGCAACAAATGGCATGAAATTGCATTTCAGCAAAACTCTGCTCAAAACGAAAGTATGTTCAATTGTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576162.5
ENST00000640213.1