Pregenerated sensors for ZP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000149506Ensembl transcript IDs: ENST00000278853.9, ENST00000537203.5, ENST00000540908.1, ENST00000542971.1, ENST00000543020.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAGCAGCTGGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGTaGTCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGA | + |
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Preference number: 1 (lower is better) Translates to: GSSWWGHRPGGCWPV*SCVSRPFLGTPRGR Trigger: TCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACATCCACCTGGCCTATGCCCCCACCAGCTGCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGAAGCAGGGGAGGTGCCCTaGGGCCACCTGGCACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: GQCDPVCQGHFLGHHEDEAGEVP*GHLALL Trigger: GAGCAGTGCCAGGTGGCCTCAGGGCACCTCCCCTGC...TTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTTGGGGAGCAGCTGGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGAAGTTCTTCTCACGATaGAGGGGAGGTGCCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: AVLGSSWWGHRPGGCWPVKFFSR*RGGALR Trigger: CCTCAGGGCACCTCCCCTGCATCGTGAGAAGAACTT...CACTGGCCAACATCCACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR CAA 90 bp | CTCTGGTGTTGTCATAGCAGCAGCCAGCCTGCTGACAGGCTTCTTTaGAAGTTCTTCTCACGATGCAGGGGAGGTGCCCTGAGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LWCCHSSSQPADRLL*KFFSRCRGGALRPP Trigger: AGGTGGCCTCAGGGCACCTCCCCTGCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAGCAGGCTGGCTGCTGCTATGACAACACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCAACAGGGAACCTCTCTaGTGTTGTCATAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GGGIGQVDVGQCDPVCQGNREPL*CCHSSS Trigger: GCTGCTGCTATGACAACACCAGAGAGGTTCCCTGTT...GCCTTGACACACAGGATCACACTGGCCAACATCCACCTGGCCTATGCCCCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR CAA 90 bp | CAGGTGGATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTaGGGACACCACGAGGACGAAGTAGCCATCTCTGAAGCACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: QVDVGQCDPVCQGHF*GHHEDEVAISEALD Trigger: GTCCAGTGCTTCAGAGATGGCTACTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACATCCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGCAGCAGCCAGCCTGCTaGCAGGCTTCTTTTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: MLASVILCVKAISWDTTRQQPAC*QASFEV Trigger: AACTTCAAAAGAAGCCTGTCAGCAGGCTGGCTGCTG...CCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR TCA 90 bp | TCTGAAGCACTGGACAGTAGCTGTGTTGCCATAGTAACAGGGAACCTCTCTGGTCTGACAGGCTTCTTTTaGAGTTCTTCTCACGATGCA | + |
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Preference number: 2 (lower is better) Translates to: SEALDSSCVAIVTGNLSGLTGFF*SSSHDA Trigger: TGCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAG...ACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGCTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR CCA 72 bp | GAAGTAGAAGACCACGAAAGCTTCCGTGTGCTGTGTTaGGGAGCAGCTGGTGGGGGCATAGGCCAGGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: EVEDHESFRVLC*GAAGGGIGQVD Trigger: ATCCACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACACAGCACACGGAAGCTTTCGTGGTCTTCTACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR-3UTR CAA 90 bp | GGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCGCTGACAGGCTTCTTTaGAAGTTCTTCTCACGATGC | + |
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Preference number: 3 (lower is better) Translates to: GGGIGQVDVGQCDPVCQGADRLL*KFFSRC Trigger: GCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAGC...GCCTTGACACACAGGATCACACTGGCCAACATCCACCTGGCCTATGCCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGGCAGGGGAGGTGCCCTaGGGCCACCTGGCACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WMLASVILCVKAISWDTTAGEVP*GHLALL Trigger: GAGCAGTGCCAGGTGGCCTCAGGGCACCTCCCCTGC...CGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR GCA 90 bp | GGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGAAGAGGCCACCTGGCACTaGTCCTGGCTCAGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQCDPVCQGHFLGHHEDEEATWH*SWLRWV Trigger: TACCCACCTGAGCCAGGAGCAGTGCCAGGTGGCCTC...TTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR CCA 90 bp | GCTGTGTTGGGGAGCAGCTGGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGAACAGGGAACCTCTCTaGTGTTGTCATAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVLGSSWWGHRPGGCWPVNREPL*CCHSSS Trigger: GCTGCTGCTATGACAACACCAGAGAGGTTCCCTGTT...CACTGGCCAACATCCACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACACAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR GCA 90 bp | ATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGATCGGCCGAGAAGACTaGAGGCTCCTGCGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MLASVILCVKAISWDTTRIGRED*RLLRPG Trigger: TCCAGGCCGCAGGAGCCTGCAGTCTTCTCGGCCGAT...CCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR GCA 90 bp | GCTGGTGGGGGCATAGGCCAGGTGGATGTTGGCCAGTGTGATCCTGTGTGTCAAAAGTTCTTCTCACGATaGAGGGGAGGTGCCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AGGGIGQVDVGQCDPVCQKFFSR*RGGALR Trigger: CCTCAGGGCACCTCCCCTGCATCGTGAGAAGAACTT...TTGACACACAGGATCACACTGGCCAACATCCACCTGGCCTATGCCCCCACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR CCA 90 bp | TCTGAAGCACTGGACAGTAGCTGTGTTGCCATAGTAACAGGGAACCTCTCTGGTGTGTTGGGGAGCAGCTaGTGGGGGCATAGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SEALDSSCVAIVTGNLSGVLGSS*WGHRPG Trigger: ACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACAC...ACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGCTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR TCA 90 bp | GGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGAACAGCAGCCAGCCTGCTaGCAGGCTTCTTTTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQCDPVCQGHFLGHHEDEQQPAC*QASFEV Trigger: AACTTCAAAAGAAGCCTGTCAGCAGGCTGGCTGCTG...TTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR TCA 90 bp | CCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGAAGTAGCCATCTCTGGATGTTGGCCAGTGTaGTCCTGTGTGTCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVCQGHFLGHHEDEVAISGCWPV*SCVSRP Trigger: TGGCCTTGACACACAGGATCACACTGGCCAACATCC...AGAGATGGCTACTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR CCA 90 bp | TCTGAAGCACTGGACAGTAGCTGTGTTGCCATAGTAACAGGGAACCTCTCTGGTTGCTCCTGGCTCAGGTaGGTACCTTCTCCAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: SEALDSSCVAIVTGNLSGCSWLR*VPSPAR Trigger: ACGTGCTGGAGAAGGTACCCACCTGAGCCAGGAGCA...ACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGCTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| 3UTR CAA 72 bp | GTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTaGGGACACCACGAGGACGAAGTAGCCATCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VGQCDPVCQGHF*GHHEDEVAISE Trigger: TTCAGAGATGGCTACTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR CCA 90 bp | TCTGAAGCACTGGACAGTAGCTGTGTTGCCATAGTAACAGGGAACCTCTCTGGTGTCAAGGCCATTTCTTaGGACACCACGAGGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: SEALDSSCVAIVTGNLSGVKAIS*DTTRTK Trigger: CTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGAC...ACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGCTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS-3UTR TCA 90 bp | TGGATGTTGGCCAGTGTGATCCTGTGTGTCAAGGCCATTTCTTGGGACACCACGCTGACAGGCTTCTTTTaGAGTTCTTCTCACGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WMLASVILCVKAISWDTTLTGFF*SSSHDA Trigger: TGCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAG...CGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCAACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS TCA 90 bp | GGAGAGTCTGGCCTGGCCTGGGGAACACCAGCAGCTGCATTCCCTTaGTCCCACAGTCGTAGCTGTGCCGGAGGCCTGGGAGGCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: GESGLAWGTPAAAFP*SHSRSCAGGLGGQG Trigger: ACCCTGGCCTCCCAGGCCTCCGGCACAGCTACGACTGTGGGATCAAGGGAATGCAGCTGCTGGTGTTCCCCAGGCCAGGCCAGACTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS GCA 90 bp | CCCCAGCACTGGTGCAGCAGCAGGACCAGGTTGGGGTCTGTCCTCTaGAGAAGCCGGACCTCCACATGGACTGGTTCTCGGAGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PQHWCSSRTRLGSVL*RSRTSTWTGSRSSL Trigger: GAGGCTGCTCCGAGAACCAGTCCATGTGGAGGTCCGGCTTCTGCAGAGGACAGACCCCAACCTGGTCCTGCTGCTGCACCAGTGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000543020.1 |
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| CDS CCA 90 bp | GGGCCCAAGTGTGGGCTCCTGCCCATAAGAATCCTCAAAGCCCACTaGCCCCGGAGAGCTCACGATGTCCTGGGGCCTGGCAGTGTCATT | + |
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Preference number: 5 (lower is better) Translates to: GPKCGLLPIRILKAH*PRRAHDVLGPGSVI Trigger: AATGACACTGCCAGGCCCCAGGACATCGTGAGCTCTCCGGGGCCAGTGGGCTTTGAGGATTCTTATGGGCAGGAGCCCACACTTGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS GCA 90 bp | ATCCTTCTCCAGCACGTGGCAGCCTCTGTAATCGGCCGAGAAGACTaGAGGCTCCTGCGGCCTGGAGGTGACCCAGTGGTAGCAGATGGA | + |
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Preference number: 5 (lower is better) Translates to: ILLQHVAASVIGRED*RLLRPGGDPVVADG Trigger: TCCATCTGCTACCACTGGGTCACCTCCAGGCCGCAGGAGCCTGCAGTCTTCTCGGCCGATTACAGAGGCTGCCACGTGCTGGAGAAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS GCA 90 bp | GCCGGGCTGGGTCATAGGAGCAGGCGATGGGGGTGGGAAAATGGATaGCTGAATGGGCAGGAAGTCACTGGCGTTGAAGACACAGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: AGLGHRSRRWGWENG*LNGQEVTGVEDTAH Trigger: GTGCGCTGTGTCTTCAACGCCAGTGACTTCCTGCCCATTCAGGCATCCATTTTCCCACCCCCATCGCCTGCTCCTATGACCCAGCCCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000543020.1 |
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| CDS GCA 90 bp | TACCTTCTCCAGCACGTGGCAGCCTCTGTAATCGGCCGAGAAGACTaGAGGCTCCTGCGGCCTGGAGGTGACCCAGTGGTAGCAGATGGA | + |
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Preference number: 5 (lower is better) Translates to: YLLQHVAASVIGRED*RLLRPGGDPVVADG Trigger: TCCATCTGCTACCACTGGGTCACCTCCAGGCCGCAGGAGCCTGCAGTCTTCTCGGCCGATTACAGAGGCTGCCACGTGCTGGAGAAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS TCA 90 bp | CGTCTTGTGCCACATCCACACGACCATTGGGCAGCACAGCCTCCATaGACACCCTCAGGTGGAAACGCCCATCCTTCTCCAGCACGTGGC | + |
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Preference number: 5 (lower is better) Translates to: RLVPHPHDHWAAQPP*TPSGGNAHPSPARG Trigger: GCCACGTGCTGGAGAAGGATGGGCGTTTCCACCTGAGGGTGTTCATGGAGGCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS GCA 90 bp | AGCAGCCAGCCTGCTGACAGGCTTCTTTTGAAGTTCTTCTCACGATaGAGGGGAGGTGCCCTGAGGCCACCTGGCACTGCTCCTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SSQPADRLLLKFFSR*RGGALRPPGTAPGS Trigger: TGAGCCAGGAGCAGTGCCAGGTGGCCTCAGGGCACCTCCCCTGCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAGCAGGCTGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000540908.1 |
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| CDS CCA 90 bp | GGTGAGAGGGAAGTAGAAGACCACGAAAGCTTCCGTGTGCTGTGTTaGGGAGCAGCTGGTGGGGGCATAGGCCAGGTGGATGTTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GEREVEDHESFRVLC*GAAGGGIGQVDVGQ Trigger: CTGGCCAACATCCACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACACAGCACACGGAAGCTTTCGTGGTCTTCTACTTCCCTCTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000542971.1 |
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| CDS TCA 90 bp | CCCGGAGAGCTCACGATGTCCTGGGGCCTGGCAGTGTCATTACGGTaGCCTGAGGATCGTCGCTGTCTTGTAGTGCCAGTGCTACATGCA | + |
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Preference number: 5 (lower is better) Translates to: PGELTMSWGLAVSLR*PEDRRCLVVPVLHA Trigger: TGCATGTAGCACTGGCACTACAAGACAGCGACGATCCTCAGGTCACCGTAATGACACTGCCAGGCCCCAGGACATCGTGAGCTCTCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 90 bp | CAGGTTGGGGTCTGTCCTCTGCAGAAGCCGGACCTCCACATGGACTaGTTCTCGGAGCAGCCTCACGATGGGATAGTCATCCTCCCCATA | + |
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Preference number: 5 (lower is better) Translates to: QVGVCPLQKPDLHMD*FSEQPHDGIVILPI Trigger: TATGGGGAGGATGACTATCCCATCGTGAGGCTGCTCCGAGAACCAGTCCATGTGGAGGTCCGGCTTCTGCAGAGGACAGACCCCAACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000543020.1 |
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| CDS CCA 90 bp | GATGAGGGCCTTGGGGTTTGGTGTCCATCCAGCACAGAGACGGGATaGCTGGGTGACAGCCAGGCTTTAAGTGCCGGTCTAGGAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: DEGLGVWCPSSTETG*LGDSQALSAGLGEW Trigger: CCATTCTCCTAGACCGGCACTTAAAGCCTGGCTGTCACCCAGCCATCCCGTCTCTGTGCTGGATGGACACCAAACCCCAAGGCCCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537203.5 ENST00000542971.1 |
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| CDS TCA 90 bp | CCTTGGGGTTTGGTGTCCATCCAGCACAGAGACGGGATGGCTGGGTaGCAGCCAGGCTTTAAGTGCCGGTCTAGGAGAATGGACGCTTAC | + |
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Preference number: 5 (lower is better) Translates to: PWGLVSIQHRDGMAG*QPGFKCRSRRMDAY Trigger: GTAAGCGTCCATTCTCCTAGACCGGCACTTAAAGCCTGGCTGTCACCCAGCCATCCCGTCTCTGTGCTGGATGGACACCAAACCCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537203.5 ENST00000542971.1 |
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| CDS CCA 90 bp | TCGGTTCCCAAATTCATCCACCACCTTGAAGCGGAGAGTCTGGCCTaGCCTGGGGAACACCAGCAGCTGCATTCCCTTGATCCCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: SVPKFIHHLEAESLA*PGEHQQLHSLDPTV Trigger: GACTGTGGGATCAAGGGAATGCAGCTGCTGGTGTTCCCCAGGCCAGGCCAGACTCTCCGCTTCAAGGTGGTGGATGAATTTGGGAACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CCA 90 bp | GCGCACATGAAGCTGGAAGGTGCTGTCCCGCGTGATGGAACCCTGTaGCCCCTTTTGGATGTGGATGCCAGACACCAGCCAGTTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: AHMKLEGAVPRDGTL*PLLDVDARHQPVLI Trigger: TATGAGAACTGGCTGGTGTCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCTTCATGTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 90 bp | GGATGGCTGGGTGACAGCCAGGCTTTAAGTGCCGGTCTAGGAGAATaGACGCTTACTCTCCACTTAGGCTGGTGTTGGCCCCAGCAAACC | + |
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Preference number: 5 (lower is better) Translates to: GWLGDSQALSAGLGE*TLTLHLGWCWPQQT Trigger: GGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCTAGACCGGCACTTAAAGCCTGGCTGTCACCCAGCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS TCA 90 bp | GTAGCCATCTCTGAAGCACTGGACAGTAGCTGGGACAAAGGCAGATaGGGGCCTTGGGGTTTGGTGTCCATCCAGCACAGAGACGGGATG | + |
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Preference number: 5 (lower is better) Translates to: VAISEALDSSWDKGR*GPWGLVSIQHRDGM Trigger: CATCCCGTCTCTGTGCTGGATGGACACCAAACCCCAAGGCCCTCATCTGCCTTTGTCCCAGCTACTGTCCAGTGCTTCAGAGATGGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000537203.5 ENST00000542971.1 |
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| CDS TCA 90 bp | TCTTGTAGTGCCAGTGCTACATGCAGTGGAGCAAGTCTCCAGCCCTaGGGTGTGGCAGGCAGAGGTGCTGCAGAACAAGTAAACCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SCSASATCSGASLQP*GVAGRGAAEQVNQS Trigger: GGACTGGTTTACTTGTTCTGCAGCACCTCTGCCTGCCACACCTCAGGGCTGGAGACTTGCTCCACTGCATGTAGCACTGGCACTACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 90 bp | TTGTTTATTGGGCCCATTCACTGTCTGTTGCTTTCCCAGAGCTTCTaGGCCCAGGTCTGGCTCAGGCCCACAAAGACACCAAACCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LFIGPIHCLLLSQSF*AQVWLRPTKTPNPR Trigger: CCTTGGGTTTGGTGTCTTTGTGGGCCTGAGCCAGACCTGGGCCCAGAAGCTCTGGGAAAGCAACAGACAGTGAATGGGCCCAATAAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS-3UTR CAA 90 bp | CCTGTGTGTCAAGGCCATTTCTTGGGACACCACGAGGACGAAGTAGCCATCTCTTGTCAAGGCCATTTCTaGGGACACCACGAGGACGAA | + |
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Preference number: 5 (lower is better) Translates to: PVCQGHFLGHHEDEVAISCQGHF*GHHEDE Trigger: TTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACA...AGAGATGGCTACTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS TCA 90 bp | TTAATAGTTCCCTGGGACAGTTGTTATAAGGCCAGCTGGGACATGTaGCCGCCCCATCTAAAGGTCTCCTCTGCCATCTGCTCTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LIVPWDSCYKASWDM*PPHLKVSSAICSGS Trigger: ACTCCCAGAGCAGATGGCAGAGGAGACCTTTAGATGGGGCGGTCACATGTCCCAGCTGGCCTTATAACAACTGTCCCAGGGAACTATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CCA 90 bp | TTAAGTGCCGGTCTAGGAGAATGGACGCTTACTCTCCACTTAGGCTaGTGTTGGCCCCAGCAAACCCTTTATGGACTGATTTTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: LSAGLGEWTLTLHLG*CWPQQTLYGLIFSS Trigger: GGATGAGAAAATCAGTCCATAAAGGGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCTAGACCGGCACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS-3UTR CAA 90 bp | TCTGAAGCACTGGACAGTAGCTGTGTTGCCATAGTAACAGGGAACCTCTCTGGTGCTGACAGGCTTCTTTaGAAGTTCTTCTCACGATGC | + |
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Preference number: 5 (lower is better) Translates to: SEALDSSCVAIVTGNLSGADRLL*KFFSRC Trigger: GCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAGC...ACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGCTTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540908.1 |
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| CDS CCA 72 bp | GAGCTGTGCCCTGGGTCCAGTGGGCTGGGAAAGGCATaGCCAGAGCCTTGGGAGGTATGGCCAGAGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ELCPGSSGLGKA*PEPWEVWPEVG Trigger: CCCCACCTCTGGCCATACCTCCCAAGGCTCTGGCCATGCCTTTCCCAGCCCACTGGACCCAGGGCACAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS TCA 72 bp | GGCCTGGCCTGGGGAACACCAGCAGCTGCATTCCCTTaGTCCCACAGTCGTAGCTGTGCCGGAGGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLAWGTPAAAFP*SHSRSCAGGLG Trigger: TCCCAGGCCTCCGGCACAGCTACGACTGTGGGATCAAGGGAATGCAGCTGCTGGTGTTCCCCAGGCCAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS GCA 72 bp | CAGCACGTGGCAGCCTCTGTAATCGGCCGAGAAGACTaGAGGCTCCTGCGGCCTGGAGGTGACCCAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QHVAASVIGRED*RLLRPGGDPVV Trigger: TACCACTGGGTCACCTCCAGGCCGCAGGAGCCTGCAGTCTTCTCGGCCGATTACAGAGGCTGCCACGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000540908.1 |
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| CDS CCA 72 bp | GGGGTTGAGACAGAGAACATGGCGGGTGGTGCCAGCTaGGAGTCCAGAGTCCGGGAGGGGTCAGGTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVETENMAGGAS*ESRVREGSGLG Trigger: TCCCAAACCTGACCCCTCCCGGACTCTGGACTCCCAGCTGGCACCACCCGCCATGTTCTCTGTCTCAACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CCA 72 bp | TGTGGGCTCCTGCCCATAAGAATCCTCAAAGCCCACTaGCCCCGGAGAGCTCACGATGTCCTGGGGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CGLLPIRILKAH*PRRAHDVLGPG Trigger: GCCAGGCCCCAGGACATCGTGAGCTCTCCGGGGCCAGTGGGCTTTGAGGATTCTTATGGGCAGGAGCCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 72 bp | CCATTGGGCAGCACAGCCTCCATGAACACCCTCAGGTaGAAACGCCCATCCTTCTCCAGCACGTGGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLGSTASMNTLR*KRPSFSSTWQP Trigger: AGGCTGCCACGTGCTGGAGAAGGATGGGCGTTTCCACCTGAGGGTGTTCATGGAGGCTGTGCTGCCCAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CCA 72 bp | GGAAGGAAAGGGTTTGTGGGGTTGAGACAGAGAACATaGCGGGTGGTGCCAGCTGGGAGTCCAGAGTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GRKGFVGLRQRT*RVVPAGSPESG Trigger: CCCGGACTCTGGACTCCCAGCTGGCACCACCCGCCATGTTCTCTGTCTCAACCCCACAAACCCTTTCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS TCA 72 bp | CACAGCGCACATGAAGCTGGAAGGTGCTGTCCCGCGTaGTGGAACCCTGTGGCCCCTTTTGGATGTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: HSAHEAGRCCPA*WNPVAPFGCGC Trigger: GCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCTTCATGTGCGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS GCA 72 bp | CTGGGACATGTGACCGCCCCATCTAAAGGTCTCCTCTaGCATCTGCTCTGGGAGTTGGGCTCTCCAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGHVTAPSKGLL*HLLWELGSPGG Trigger: TCCTCCTGGAGAGCCCAACTCCCAGAGCAGATGGCAGAGGAGACCTTTAGATGGGGCGGTCACATGTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CCA 72 bp | AAGCTGGAAGGTGCTGTCCCGCGTGATGGAACCCTGTaGCCCCTTTTGGATGTGGATGCCAGACACCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KLEGAVPRDGTL*PLLDVDARHQP Trigger: TGGCTGGTGTCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 72 bp | GCAGCAAAAGGACCGCCCAAAGGAGAGGTCTCAGGCTaGAGTTCCCATTGGAGTCTGTGGGCCCAAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AAKGPPKGEVSG*SSHWSLWAQVW Trigger: CCACACTTGGGCCCACAGACTCCAATGGGAACTCCAGCCTGAGACCTCTCCTTTGGGCGGTCCTTTTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CCA 72 bp | ATGCTGGAAGGTGCTGTCCCGCGTGATGGAACCCTGTaGCCCCTTTTGGATGTGGATGCCAGACACCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: MLEGAVPRDGTL*PLLDVDARHQP Trigger: TGGCTGGTGTCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542971.1 |
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| CDS TCA 72 bp | CTCACGATGTCCTGGGGCCTGGCAGTGTCATTACGGTaGCCTGAGGATCGTCGCTGTCTTGTAGTGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LTMSWGLAVSLR*PEDRRCLVVPV Trigger: CACTGGCACTACAAGACAGCGACGATCCTCAGGTCACCGTAATGACACTGCCAGGCCCCAGGACATCGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS GCA 72 bp | GGGGTCAGGTTTGGGACAGATCAGAGTAGCGTCTTGTaGCACATCCACACGACCATTGGGCAGCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GVRFGTDQSSVL*HIHTTIGQHSL Trigger: GAGGCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACGCTACTCTGATCTGTCCCAAACCTGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CCA 72 bp | CTTGGGGTTTGGTGTCCATCCAGCACAGAGACGGGATaGCTGGGTGACAGCCAGGCTTTAAGTGCCGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LGVWCPSSTETG*LGDSQALSAGL Trigger: TAGACCGGCACTTAAAGCCTGGCTGTCACCCAGCCATCCCGTCTCTGTGCTGGATGGACACCAAACCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537203.5 ENST00000542971.1 |
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| CDS CAA 72 bp | GGAGGGGTCAGGTTTGGGACAGATCAGAGTAGCGTCTaGTGCCACATCCACACGACCATTGGGCAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GGVRFGTDQSSV*CHIHTTIGQHS Trigger: GCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACGCTACTCTGATCTGTCCCAAACCTGACCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CAA 72 bp | CGACTGGAAAGGTGTGGCCCCGTCCAAGGCTACCATTaGGGTTCTGTAGCTGTCGCCCTTGAAAGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: RLERCGPVQGYH*GSVAVALERAS Trigger: GGATGCCCTTTCAAGGGCGACAGCTACAGAACCCAAATGGTAGCCTTGGACGGGGCCACACCTTTCCAGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000543020.1 |
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| CDS CAA 90 bp | TTGGGACAGATCAGAGTAGCGTCTTGTGCCACATCCACACGACCATaGGGCAGCACAGCCTCCATGAACACCCTCAGGTGGAAACGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGQIRVASCATSTRP*GSTASMNTLRWKRP Trigger: TGGGCGTTTCCACCTGAGGGTGTTCATGGAGGCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACGCTACTCTGATCTGTCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CAA 90 bp | AAGCTGGAAGGTGCTGTCCCGCGTGATGGAACCCTGTGGCCCCTTTaGGATGTGGATGCCAGACACCAGCCAGTTCTCATAGATGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLEGAVPRDGTLWPL*DVDARHQPVLIDEL Trigger: CAGCTCATCTATGAGAACTGGCTGGTGTCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278853.9 ENST00000537203.5 |
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| CDS CAA 90 bp | ATGCTGGAAGGTGCTGTCCCGCGTGATGGAACCCTGTGGCCCCTTTaGGATGTGGATGCCAGACACCAGCCAGTTCTCATAGATGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: MLEGAVPRDGTLWPL*DVDARHQPVLIDEL Trigger: CAGCTCATCTATGAGAACTGGCTGGTGTCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542971.1 |
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| CDS TCA 72 bp | GGATGTGGATGCCAGACACCAGCCAGTTCTCATAGATaGGCTGGTCGCCAGCCACCTGCATTGTGGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GCGCQTPASSHR*AGRQPPALWFH Trigger: GTGGAACCACAATGCAGGTGGCTGGCGACCAGCTCATCTATGAGAACTGGCTGGTGTCTGGCATCCACATCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000542971.1 |
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| CDS TCA 72 bp | CCCTGGGACAGTTGTTATAAGGCCAGCTGGGACATGTaGCCGCCCCATCTAAAGGTCTCCTCTGCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PWDSCYKASWDM*PPHLKVSSAIC Trigger: GCAGATGGCAGAGGAGACCTTTAGATGGGGCGGTCACATGTCCCAGCTGGCCTTATAACAACTGTCCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS TCA 72 bp | TTGGTGTCCATCCAGCACAGAGACGGGATGGCTGGGTaGCAGCCAGGCTTTAAGTGCCGGTCTAGGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LVSIQHRDGMAG*QPGFKCRSRRM Trigger: CATTCTCCTAGACCGGCACTTAAAGCCTGGCTGTCACCCAGCCATCCCGTCTCTGTGCTGGATGGACACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537203.5 ENST00000542971.1 |
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| CDS CCA 72 bp | GGTGACAGCCAGGCTTTAAGTGCCGGTCTAGGAGAATaGACGCTTACTCTCCACTTAGGCTGGTGTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GDSQALSAGLGE*TLTLHLGWCWP Trigger: GGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCTAGACCGGCACTTAAAGCCTGGCTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CAA 72 bp | ATCAGAGTAGCGTCTTGTGCCACATCCACACGACCATaGGGCAGCACAGCCTCCATGAACACCCTCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: IRVASCATSTRP*GSTASMNTLRW Trigger: CCACCTGAGGGTGTTCATGGAGGCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACGCTACTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS CCA 72 bp | AAATTCATCCACCACCTTGAAGCGGAGAGTCTGGCCTaGCCTGGGGAACACCAGCAGCTGCATTCCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: KFIHHLEAESLA*PGEHQQLHSLD Trigger: ATCAAGGGAATGCAGCTGCTGGTGTTCCCCAGGCCAGGCCAGACTCTCCGCTTCAAGGTGGTGGATGAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278853.9 |
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| CDS TCA 72 bp | TCACGATGGGATAGTCATCCTCCCCATAGTACGAGCTaGAGGTCTCGTCTTTGGCAATCCGCAGCTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SRWDSHPPHSTS*RSRLWQSAAQA Trigger: GGCTTGAGCTGCGGATTGCCAAAGACGAGACCTTCAGCTCGTACTATGGGGAGGATGACTATCCCATCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278853.9 ENST00000537203.5 ENST00000543020.1 |
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| CDS CAA 90 bp | TGCCGGTCTAGGAGAATGGACGCTTACTCTCCACTTAGGCTGGTGTaGGCCCCAGCAAACCCTTTATGGACTGATTTTCTCATCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: CRSRRMDAYSPLRLV*APANPLWTDFLIHV Trigger: CACATGGATGAGAAAATCAGTCCATAAAGGGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCTAGACCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CCA 72 bp | GGTCTAGGAGAATGGACGCTTACTCTCCACTTAGGCTaGTGTTGGCCCCAGCAAACCCTTTATGGACTGATT | + |
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Preference number: 6 (lower is better) Translates to: GLGEWTLTLHLG*CWPQQTLYGLI Trigger: AATCAGTCCATAAAGGGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CCA 72 bp | GGAGAATGGACGCTTACTCTCCACTTAGGCTGGTGTTaGCCCCAGCAAACCCTTTATGGACTGATTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GEWTLTLHLGWC*PQQTLYGLIFS Trigger: TGAGAAAATCAGTCCATAAAGGGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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| CDS CAA 72 bp | AGGAGAATGGACGCTTACTCTCCACTTAGGCTGGTGTaGGCCCCAGCAAACCCTTTATGGACTGATTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RRMDAYSPLRLV*APANPLWTDFL Trigger: GAGAAAATCAGTCCATAAAGGGTTTGCTGGGGCCAACACCAGCCTAAGTGGAGAGTAAGCGTCCATTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537203.5 |
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