RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNHIT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000117174

Ensembl transcript IDs: ENST00000370574.4, ENST00000431532.6

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGATCTATCTGCCCCCATGACCCAAACACCTTCCATTAGGCTCTaGCTCCCAACACTAGCACATGGGGAATCTAATTTCAACATGAGT +
Preference number: 1 (lower is better)
Translates to: WDLSAPMTQTPSIRL*LPTLAHGESNFNMS
Trigger: ACTCATGTTGAAATTAGATTCCCCATGTGCTAGTGTTGGGAGGCAGAGCCTAATGGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp AAAATAATCAGAGCCAAGTGTGTAGGATGGCAAGATGACTGCTTTTaGCGTTTGGACCCAGGACCCAGTCATTGCCTGGACTTCCCTGTA +
Preference number: 1 (lower is better)
Translates to: KIIRAKCVGWQDDCF*RLDPGPSHCLDFPV
Trigger: TACAGGGAAGTCCAGGCAATGACTGGGTCCTGGGTCCAAACGTCAAAAGCAGTCATCTTGCCATCCTACACACTTGGCTCTGATTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp TCCCTACATTCTGGCTTTCTTCTAAAAATTTCCCCCTCCTTTGGGTaGATTCCTCTCTTGATTAGCTCAGGAACGGAATGTGATCCAATC +
Preference number: 1 (lower is better)
Translates to: SLHSGFLLKISPSFG*IPLLISSGTECDPI
Trigger: GATTGGATCACATTCCGTTCCTGAGCTAATCAAGAGAGGAATTCACCCAAAGGAGGGGGAAATTTTTAGAAGAAAGCCAGAATGTAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp AAGGAGAAAATCAAGAAAGCCAGACTCTTTAGTAACCCTTGCTTGTaGGAACTAATCCATTCCCACGACAGCAAGAATGAGAACTCACTC +
Preference number: 1 (lower is better)
Translates to: KEKIKKARLFSNPCL*ELIHSHDSKNENSL
Trigger: GAGTGAGTTCTCATTCTTGCTGTCGTGGGAATGGATTAGTTCTCACAAGCAAGGGTTACTAAAGAGTCTGGCTTTCTTGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp AGCTTGCTTTATAAAAGCTTTCAGCCTTGTTATGCTAAGGTAAGCTaGAAATGTCAATTGCTGTTATCCACCATCCTCTCACCTCACTGT +
Preference number: 1 (lower is better)
Translates to: SLLYKSFQPCYAKVS*KCQLLLSTILSPHC
Trigger: ACAGTGAGGTGAGAGGATGGTGGATAACAGCAATTGACATTTTCAGCTTACCTTAGCATAACAAGGCTGAAAGCTTTTATAAAGCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp TGCCTGGACTTCCCTGTATATAAGCCAATGAACTGCCCTTCATGCTaGCACTATTTTGAGTTTTTGTCACTTGCATATAAACAACACATT +
Preference number: 1 (lower is better)
Translates to: CLDFPVYKPMNCPSC*HYFEFLSLAYKQHI
Trigger: AATGTGTTGTTTATATGCAAGTGACAAAAACTCAAAATAGTGTCAGCATGAAGGGCAGTTCATTGGCTTATATACAGGGAAGTCCAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 90 bp TACAAATCAGAAACTTCTTGCTACTCAAATTCAAACAGGGTGCAATaGATGTGTTACTTTCGTATTCCCAGTAACTACCTTTCCTCACCT +
Preference number: 1 (lower is better)
Translates to: YKSETSCYSNSNRVQ*MCYFRIPSNYLSSP
Trigger: AGGTGAGGAAAGGTAGTTACTGGGAATACGAAAGTAACACATTCATTGCACCCTGTTTGAATTTGAGTAGCAAGAAGTTTCTGATTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCTGTCACCCAGGCAGTaGCCAGGAATGCAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSLSPRQ*PGMQWN
Trigger: GTTCCACTGCATTCCTGGGCACTGCCTGGGTGACAG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR CAA 90 bp TGGAAGGCTCAAGATTGGGCAGCTGTATCTGGTGAGGGTCTCATGTaGCTTCCACTCTTGGTACAAAGTGAAAGGGGAGTAGGTATGTGC +
Preference number: 2 (lower is better)
Translates to: WKAQDWAAVSGEGLM*LPLLVQSERGVGMC
Trigger: GCACATACCTACTCCCCTTTCACTTTGTACCAAGAGTGGAAGCAACATGAGACCCTCACCAGATACAGCTGCCCAATCTTGAGCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGGTGGAAGGATTGCTTaGGGCCACAAATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAGGRIA*GHKFET
Trigger: GGTCTCAAATTTGTGGCCTCAAGCAATCCTTCCACC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCCAACAGCCCATCAATaGAGAGTCTGCTGCAGTTGT +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSPTAHQ*RVCCSC
Trigger: ACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR TCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCATTCCAATCACCCATTaGCAATACCCCAATCAGCCA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSIPITH*QYPNQP
Trigger: TGGCTGATTGGGGTATTGTCAATGGGTGATTGGAAT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCATCAATGCAGAGTCTaGTGCAGTTGTCTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSHQCRV*CSCLEV
Trigger: AACTTCCAGACAACTGCAGCAGACTCTGCATTGATG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCCAAATCCCACTACTTaGTACAGGGAAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSPNPTT*YRETNW
Trigger: CCAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCGGAATGCCAACTTTGTaGTTGACATGGGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSGMPTL*LTWVIL
Trigger: AAGGATCACCCATGTCAACCACAAAGTTGGCATTCC...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAGCTGTGAGCCACTGTaGCTAGCCAATTCATATTTA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSSCEPL*LANSYL
Trigger: TAAATATGAATTGGCTAGGCACAGTGGCTCACAGCT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATCTGCTGCAGTTGTCTaGAAGTTTTCACTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: KGMPTLWLTWVILGFRHASAAVV*KFSLSS
Trigger: AGAAGAAAGTGAAAACTTCCAGACAACTGCAGCAGA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCAACAGCCCATCAATaGAGAGTCTGCTGCAGTTGT +
Preference number: 2 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPTAHQ*RVCCSC
Trigger: ACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR TCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCACAATGTGGAGCCACTaGTTTTCTGAAGTGAATATA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSTMWSH*FSEVNI
Trigger: TATATTCACTTCAGAAAATCAGTGGCTCCACATTGT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTAGCCTGTTGGGAGGCTaGAGTGAGAGGACCATTCGA +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSLLGG*SERTIR
Trigger: TCGAATGGTCCTCTCACTGCAGCCTCCCAACAGGCT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCCTGTGGCTAGACGGTaGGTTGTACAGCCTTTCCGT +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFPVARR*VVQPFR
Trigger: ACGGAAAGGCTGTACAACGCACCGTCTAGCCACAGG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCGATATTGGGTCTCAATaGTACAAACATCTAGGGTTT +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSDIGSQ*YKHLGF
Trigger: AAACCCTAGATGTTTGTAGCATTGAGACCCAATATC...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCCTCCAAAAAGATATTaGGTCTCAATGCTACAAACA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSPPKRY*VSMLQT
Trigger: TGTTTGTAGCATTGAGACCCAATATCTTTTTGGAGG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCATGCTGAACTTAACATaGGTCAAGGAGTTTGTTTAC +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSMLNLT*VKEFVY
Trigger: GTAAACAAACTCCTTGACCCATGTTAAGTTCAGCAT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTATTCCAATCACCCATTaGCAATACCCCAATCAGCCA +
Preference number: 2 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLIPITH*QYPNQP
Trigger: TGGCTGATTGGGGTATTGTCAATGGGTGATTGGAAT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCATCAATGCAGAGTCTaGTGCAGTTGTCTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLHQCRV*CSCLEV
Trigger: AACTTCCAGACAACTGCAGCAGACTCTGCATTGATG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCACTATGCTGATCAAGTaGAAAGGAGAGTTCTTAATA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSTMLIK*KGEFLI
Trigger: TATTAAGAACTCTCCTTTGCACTTGATCAGCATAGT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTACAGGGAAACAAACTaGATCAACTACATTTTGGAA +
Preference number: 2 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSYRETN*INYILE
Trigger: TTCCAAAATGTAGTTGATCCAGTTTGTTTCCCTGTA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATAGATTAGTTCTCCTGTaGCTAGACGGTGCGTTGTAC +
Preference number: 2 (lower is better)
Translates to: DISKHSIKLVITTPFCSNRLVLL*LDGALY
Trigger: GTACAACGCACCGTCTAGCCACAGGAGAACTAATCT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTATGCTCATACCACTTaGACTCCAAGACCCCATCTC +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFYAHTT*TPRPHL
Trigger: GAGATGGGGTCTTGGAGTGCAAGTGGTATGAGCATA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGGAATGCCAACTTTGTaGTTGACATGGGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: DISKHSIKLVITTPFCSNGMPTL*LTWVIL
Trigger: AAGGATCACCCATGTCAACCACAAAGTTGGCATTCC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTATCACAACACCCTTCTaGAGTAATGATGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFITTPF*SNDESG
Trigger: CCCACTCTCATCATTACTGCAGAAGGGTGTTGTGAT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGTAATCCCAATGCTTTaGAGTCTGAGGTGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFVIPML*SLRWKD
Trigger: ATCCTTCCACCTCAGACTCCAAAGCATTGGGATTAC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTACTTTGTGGTTGACATaGGTGATCCTTGGGTTTCGT +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFTLWLT*VILGFR
Trigger: ACGAAACCCAAGGATCACCCATGTCAACCACAAAGT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTAATTTGAGGAAGCTATaGTCATACCACTTGCACTCC +
Preference number: 2 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFNLRKL*SYHLHS
Trigger: GGAGTGCAAGTGGTATGAGCATAGCTTCCTCAAATT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGAGCCACTGATTTTCTaGAGTGAATATAAGAAACAG +
Preference number: 2 (lower is better)
Translates to: DISKHSIKLVITTPFCSNEPLIF*SEYKKQ
Trigger: CTGTTTCTTATATTCACTTCAGAAAATCAGTGGCTC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR GCA 72 bp TTAGCTGAGTGTGGTGGTACCAGCCTGTTGGGAGGCTaGAGTGAGAGGACCATTCGAGCCCAGGAATTTGAG +
Preference number: 3 (lower is better)
Translates to: LAECGGTSLLGG*SERTIRAQEFE
Trigger: CTCAAATTCCTGGGCTCGAATGGTCCTCTCACTGCAGCCTCCCAACAGGCTGGTACCACCACACTCAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp CTCAGCTCACTGCAAACTCTGCCACCAGGGTTCAAGTaGTTCTCGTGCCCCAGCTTCCTGAGTAGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LSSLQTLPPGFK*FSCPSFLSSWN
Trigger: ATTCCAGCTACTCAGGAAGCTGGGGCACGAGAATCACTTGAACCCTGGTGGCAGAGTTTGCAGTGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp AGAGCCAAGTGTGTAGGATGGCAAGATGACTGCTTTTaGCGTTTGGACCCAGGACCCAGTCATTGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: RAKCVGWQDDCF*RLDPGPSHCLD
Trigger: GTCCAGGCAATGACTGGGTCCTGGGTCCAAACGTCAAAAGCAGTCATCTTGCCATCCTACACACTTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp TGGCTGGAAGGCTCAAGATTGGGCAGCTGTATCTGGTaGGGGTCTCATGTTGCTTCCACTCTTGGTACAAAG +
Preference number: 3 (lower is better)
Translates to: WLEGSRLGSCIW*GSHVASTLGTK
Trigger: CTTTGTACCAAGAGTGGAAGCAACATGAGACCCTCACCAGATACAGCTGCCCAATCTTGAGCCTTCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR GCA 72 bp TCTGCCCCCATGACCCAAACACCTTCCATTAGGCTCTaGCTCCCAACACTAGCACATGGGGAATCTAATTTC +
Preference number: 3 (lower is better)
Translates to: SAPMTQTPSIRL*LPTLAHGESNF
Trigger: GAAATTAGATTCCCCATGTGCTAGTGTTGGGAGGCAGAGCCTAATGGAAGGTGTTTGGGTCATGGGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR CCA 72 bp TTGGCTCATGATTCTGGTGGCTGGAAGGCTCAAGATTaGGCAGCTGTATCTGGTGAGGGTCTCATGTTGCTT +
Preference number: 3 (lower is better)
Translates to: LAHDSGGWKAQD*AAVSGEGLMLL
Trigger: AAGCAACATGAGACCCTCACCAGATACAGCTGCCCAATCTTGAGCCTTCCAGCCACCAGAATCATGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCAGGGTTTTGCCATGTaGGCCAGGCTAGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSQGFAM*ARLVSN
Trigger: GTTTGAGACTAGCCTGGCCAACATGGCAAAACCCTG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR GCA 72 bp AGAGGACCATTCGAGCCCAGGAATTTGAGGAAGCTATaGTCATACCACTTGCACTCCAAGACCCCATCTCAA +
Preference number: 3 (lower is better)
Translates to: RGPFEPRNLRKL*SYHLHSKTPSQ
Trigger: TTGAGATGGGGTCTTGGAGTGCAAGTGGTATGAGCATAGCTTCCTCAAATTCCTGGGCTCGAATGGTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp GCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATaGCCCAAACACCTTCCATTAGGCTCTGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: ALVYSCGIYLPP*PKHLPLGSASQ
Trigger: TTGGGAGGCAGAGCCTAATGGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAAATTCCAATCACCCATaGACAATACCCCAATCAGCC +
Preference number: 3 (lower is better)
Translates to: KGMPTLWLTWVILGFRHANSNHP*TIPQSA
Trigger: GGCTGATTGGGGTATTGTCAATGGGTGATTGGAATT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAAGGGAATGCCAACTTaGTGGTTGACATGGGTGATC +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSKGMPT*WLTWVI
Trigger: GATCACCCATGTCAACCACAAAGTTGGCATTCCCTT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCCCCAAATCCCACTACTaGCTACAGGGAAACAAACTG +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSPKSHY*LQGNKL
Trigger: CAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGGG...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp CTTGTGAGAACTAATCCATTCCCACGACAGCAAGAATaGGAACTCACTCACCCCAGTAGGAGGGCATTAGTT +
Preference number: 3 (lower is better)
Translates to: LVRTNPFPRQQE*ELTHPSRRALV
Trigger: AACTAATGCCCTCCTACTGGGGTGAGTGAGTTCTCATTCTTGCTGTCGTGGGAATGGATTAGTTCTCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCGCCTCCAAAAAGATATaGGGTCTCAATGCTACAAAC +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSASKKI*GLNATN
Trigger: GTTTGTAGCATTGAGACCCAATATCTTTTTGGAGGC...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTCTCTTACAGTCATATaGCAGTTTCACAGTGGTATA +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSSLTVI*QFHSGI
Trigger: TATACCACTGTGAAACTGCAATATGACTGTAAGAGA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAAACTACAGGATAGTTaGTTTTCTGTCCAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSKLQDS*FSVQVS
Trigger: TGAAACCTGGACAGAAAACAAACTATCCTGTAGTTT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp ATCAAGAAAGCCAGACTCTTTAGTAACCCTTGCTTGTaGGAACTAATCCATTCCCACGACAGCAAGAATGAG +
Preference number: 3 (lower is better)
Translates to: IKKARLFSNPCL*ELIHSHDSKNE
Trigger: CTCATTCTTGCTGTCGTGGGAATGGATTAGTTCTCACAAGCAAGGGTTACTAAAGAGTCTGGCTTTCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCAGAGTCTGCTGCAGTaGTCTGGAAGTTTTCACTTT +
Preference number: 3 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLQSLLQ*SGSFHF
Trigger: AAAGTGAAAACTTCCAGACAACTGCAGCAGACTCTG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR GCA 72 bp CATGGAGAGGGCCTCCAAAAAGATATTGGGTCTCAATaGTACAAACATCTAGGGTTTTCAGTTAGTTATTCC +
Preference number: 3 (lower is better)
Translates to: HGEGLQKDIGSQ*YKHLGFSVSYS
Trigger: GGAATAACTAACTGAAAACCCTAGATGTTTGTAGCATTGAGACCCAATATCTTTTTGGAGGCCCTCTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATTTCGAGCCCAGGAATTaGAGGAAGCTATGCTCATAC +
Preference number: 3 (lower is better)
Translates to: DISKHSIKLVITTPFCSNFEPRN*RKLCSY
Trigger: GTATGAGCATAGCTTCCTCAAATTCCTGGGCTCGAA...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTGTAATCCCAATGCTTaGGAGTCTGAGGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFCNPNA*ESEVEG
Trigger: TCCTTCCACCTCAGACTCCAAAGCATTGGGATTACA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTAAGGGAATGCCAACTTaGTGGTTGACATGGGTGATC +
Preference number: 3 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFKGMPT*WLTWVI
Trigger: GATCACCCATGTCAACCACAAAGTTGGCATTCCCTT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCAGAGTCTGCTGCAGTaGTCTGGAAGTTTTCACTTT +
Preference number: 3 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFQSLLQ*SGSFHF
Trigger: AAAGTGAAAACTTCCAGACAACTGCAGCAGACTCTG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp GAAACTTCTTGCTACTCAAATTCAAACAGGGTGCAATaGATGTGTTACTTTCGTATTCCCAGTAACTACCTT +
Preference number: 3 (lower is better)
Translates to: ETSCYSNSNRVQ*MCYFRIPSNYL
Trigger: AAGGTAGTTACTGGGAATACGAAAGTAACACATTCATTGCACCCTGTTTGAATTTGAGTAGCAAGAAGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR TCA 72 bp TTCCCTGTATATAAGCCAATGAACTGCCCTTCATGCTaGCACTATTTTGAGTTTTTGTCACTTGCATATAAA +
Preference number: 3 (lower is better)
Translates to: FPVYKPMNCPSC*HYFEFLSLAYK
Trigger: TTTATATGCAAGTGACAAAAACTCAAAATAGTGTCAGCATGAAGGGCAGTTCATTGGCTTATATACAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGTTGGGAGGCTGCAGTaGGAGGACCATTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAVGRLQ*EDHSSP
Trigger: TGGGCTCGAATGGTCCTCTCACTGCAGCCTCCCAAC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCACGGCGGCCCACGTGTaGAGCCAAGCAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSTAAHV*SQAATN
Trigger: GTTTGTGGCTGCTTGGCTCCACACGTGGGCCGCCGT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCTGTCACCCAGGCAGTaGCCAGGAATGCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLSPRQ*PGMQWN
Trigger: GTTCCACTGCATTCCTGGGCACTGCCTGGGTGACAG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATTGCAGCCCACCGGGTaGTTTATCGGAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALQPTG*FIGGSS
Trigger: AGAAGAGCCTCCGATAAATCACCCGGTGGGCTGCAA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTTGCAGCCCACCGGGTaGTTTATCGGAGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLQPTG*FIGGSS
Trigger: AGAAGAGCCTCCGATAAATCACCCGGTGGGCTGCAA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACGTGCCCCAGCTTCCTaGGTAGCTGGAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHARAPAS*VAGITG
Trigger: ACCTGTAATTCCAGCTACTCAGGAAGCTGGGGCACG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCACTGGCCAGCCAACCTaGCTTCTGTACCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSTGQPT*LLYLAS
Trigger: ACTGGCCAGGTACAGAAGGCAGGTTGGCTGGCCAGT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACCACGACAGCAAGAATaGGAACTCACTCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAPRQQE*ELTHPS
Trigger: ACTGGGGTGAGTGAGTTCTCATTCTTGCTGTCGTGG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCATGTGGGATCTATCTaGCCCCATGACCCAAACACC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSHVGSI*PHDPNT
Trigger: GGTGTTTGGGTCATGGGGGCAGATAGATCCCACATG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTACAAGTCTCACACCTTaGCATGGCCAGTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSTSLTP*HGQFPL
Trigger: AAGCGGAAACTGGCCATGTCAAGGTGTGAGACTTGT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTCCCCCTCCTTTGGGTaGATTCCTCTCTTGATTAGC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSSPSFG*IPLLIS
Trigger: GCTAATCAAGAGAGGAATTCACCCAAAGGAGGGGGA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAACGATCCTTGGCCTCTaGTGCCACTCTATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHATILGL*CHSILQ
Trigger: TTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACCAACAGCCCATCAATaGAGAGTCTGCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAPTAHQ*RVCCSC
Trigger: ACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTACAATCTCAGCTCACTaGAAACTCTGCCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSTISAH*KLCHQG
Trigger: ACCCTGGTGGCAGAGTTTGCAGTGAGCTGAGATTGT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCCTTCCATTAGGCTCTaGCTCCCAACACTAGCACAT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSPSIRL*LPTLAH
Trigger: ATGTGCTAGTGTTGGGAGGCAGAGCCTAATGGAAGG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCTACTATCCGTCTCCTaGTTCACTACCGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLLSVS*FTTVRS
Trigger: GGACCTAACGGTAGTGAAGCAGGAGACGGATAGTAG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCTCTTCCTTTACCTCTaGTTCACCCACCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLFLYL*FTHLRF
Trigger: GAAGCGAAGGTGGGTGAACCAGAGGTAAAGGAAGAG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTCTCACACCTTGACATaGCCAGTTTCCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSSHTLT*PVSACS
Trigger: GCTGCAAGCGGAAACTGGCCATGTCAAGGTGTGAGA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATGGAAGGCTCAAGATTaGGCAGCTGTATCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAWKAQD*AAVSGE
Trigger: CTCACCAGATACAGCTGCCCAATCTTGAGCCTTCCA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCTCTTCCTTCACTTCTaGCCAGTCCATTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLFLHF*PVHYLF
Trigger: GAAGAGGTAATGGACTGGTCAGAAGTGAAGGAAGAG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACTCTTCCTTCACTTCTaGCCAGTCCATTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALFLHF*PVHYLF
Trigger: GAAGAGGTAATGGACTGGTCAGAAGTGAAGGAAGAG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTGTTGGGAGGCTGCAGTaGGAGGACCATTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLVGRLQ*EDHSSP
Trigger: TGGGCTCGAATGGTCCTCTCACTGCAGCCTCCCAAC...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGTTTTATTTGGCTCATaGTTCTGGTGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAVLFGS*FWWLEG
Trigger: GCCTTCCAGCCACCAGAATCATGAGCCAAATAAAAC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTATCCTTCAATGTGGCTaGTGCACACCAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSILQCG*CTPIGG
Trigger: TCCTCCTATTGGTGTGCAGCAGCCACATTGAAGGAT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATATGCTCATACCACTTaGACTCCAAGACCCCATCTC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAYAHTT*TPRPHL
Trigger: GAGATGGGGTCTTGGAGTGCAAGTGGTATGAGCATA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACTCTATCCTTCAATGTaGCTGCTGCACACCAATAGG +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALYPSM*LLHTNR
Trigger: CCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACATCGGTATTTCCTCTaGCCTTTGTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAHRYFL*PLSTSF
Trigger: GAAGGAAGTGGACAAAGGCCAGAGGAAATACCGATG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCATCGGTATTTCCTCTaGCCTTTGTCCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSHRYFL*PLSTSF
Trigger: GAAGGAAGTGGACAAAGGCCAGAGGAAATACCGATG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGACATGGGTGATCCTTaGGTTTCGTCACGCATGAAA +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSDMGDP*VSSRMK
Trigger: TTTCATGCGTGACGAAACCCAAGGATCACCCATGTC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAGATTAGTTCTCCTGTaGCTAGACGGTGCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSRLVLL*LDGALY
Trigger: GTACAACGCACCGTCTAGCCACAGGAGAACTAATCT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACTCAGGAACGGAATGTaGTCCAATCTGGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALRNGM*SNLGKI
Trigger: TATTTTGCCCAGATTGGATCACATTCCGTTCCTGAG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCTCAGGAACGGAATGTaGTCCAATCTGGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSLRNGM*SNLGKI
Trigger: TATTTTGCCCAGATTGGATCACATTCCGTTCCTGAG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACTTCAATGTGGCTGCTaGACACCAATAGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALQCGC*TPIGGI
Trigger: AATTCCTCCTATTGGTGTGCAGCAGCCACATTGAAG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCATCCTTCAATGTGGCTaGTGCACACCAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSILQCG*CTPIGG
Trigger: TCCTCCTATTGGTGTGCAGCAGCCACATTGAAGGAT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAATGGTCCGCTGTTCTTaGCACATCTTCCAAAAATCG +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAMVRCS*HIFQKS
Trigger: CGATTTTTGGAAGATGTGGCAAGAACAGCGGACCAT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTATCACAACACCCTTCTaGAGTAATGATGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSITTPF*SNDESG
Trigger: CCCACTCTCATCATTACTGCAGAAGGGTGTTGTGAT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCCAAATCCCACTACTTaGTACAGGGAAACAAACTGG +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSPNPTT*YRETNW
Trigger: CCAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATACGGCGGCCCACGTGTaGAGCCAAGCAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNTAAHV*SQAATN
Trigger: GTTTGTGGCTGCTTGGCTCCACACGTGGGCCGCCGT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGTAATCCCAATGCTTTaGAGTCTGAGGTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSVIPML*SLRWKD
Trigger: ATCCTTCCACCTCAGACTCCAAAGCATTGGGATTAC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCGACATGGGTGATCCTTaGGTTTCGTCACGCATGAAA +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSDMGDP*VSSRMK
Trigger: TTTCATGCGTGACGAAACCCAAGGATCACCCATGTC...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAACTTTGTGGTTGACATaGGTGATCCTTGGGTTTCGT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHATLWLT*VILGFR
Trigger: ACGAAACCCAAGGATCACCCATGTCAACCACAAAGT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGGAATGCCAACTTTGTaGTTGACATGGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSGMPTL*LTWVIL
Trigger: AAGGATCACCCATGTCAACCACAAAGTTGGCATTCC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTGTTGCTTCCACTCTTaGTACAAAGTGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSCCFHS*YKVKGE
Trigger: CTCCCCTTTCACTTTGTACCAAGAGTGGAAGCAACA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCTAGTCTCAAACACCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLLVSNT*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGTGTTTGAGACTAG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTGGCCAGTTTCCGCTTaGAGCCCACCGGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLWPVSA*SPPGDL
Trigger: TAAATCACCCGGTGGGCTGCAAGCGGAAACTGGCCA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCTGTGGCTAGACGGTaGGTTGTACAGCCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPVARR*VVQPFR
Trigger: ACGGAAAGGCTGTACAACGCACCGTCTAGCCACAGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCATCACAACACCCTTCTaGAGTAATGATGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSITTPF*SNDESG
Trigger: CCCACTCTCATCATTACTGCAGAAGGGTGTTGTGAT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAAGCTGTGAGCCACTGTaGCTAGCCAATTCATATTTA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHASCEPL*LANSYL
Trigger: TAAATATGAATTGGCTAGGCACAGTGGCTCACAGCT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAGCTGTGAGCCACTGTaGCTAGCCAATTCATATTTA +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSSCEPL*LANSYL
Trigger: TAAATATGAATTGGCTAGGCACAGTGGCTCACAGCT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCCCTCAGCTACGCTGTaGAGACCTCCCCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNPSATL*RPPPDF
Trigger: GAAGTCTGGGGGAGGTCTCCACAGCGTAGCTGAGGG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR CAA 72 bp GCTGTATCTGGTGAGGGTCTCATGTTGCTTCCACTCTaGGTACAAAGTGAAAGGGGAGTAGGTATGTGCAAA +
Preference number: 4 (lower is better)
Translates to: AVSGEGLMLLPL*VQSERGVGMCK
Trigger: TTTGCACATACCTACTCCCCTTTCACTTTGTACCAAGAGTGGAAGCAACATGAGACCCTCACCAGATACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAACTGCCCTTCATGCTaGCACTATTTTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSNCPSC*HYFEFL
Trigger: CAAAAACTCAAAATAGTGTCAGCATGAAGGGCAGTT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCAAGATGACTGCTTTTaGCGTTTGGACCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLQDDCF*RLDPGP
Trigger: GGGTCCTGGGTCCAAACGTCAAAAGCAGTCATCTTG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGTATCTCTCAAATGCTaGTGCCACTGGGAAAAATTT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAVSLKC*CHWEKF
Trigger: AAATTTTTCCCAGTGGCATCAGCATTTGAGAGATAC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTGGACATCTGTACTTTaGTTCTTCTGTACCACAAGT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSWTSVL*FFCTTS
Trigger: ACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATTTAAGTTAATACCTTaGCTCCGGGCACGATTTTTC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAFKLIP*LRARFF
Trigger: GAAAAATCGTGCCCGGAGGCAAGGTATTAACTTAAA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGCTGAAAATGTCAATTaGTGTTATCCACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAAENVN*CYPPSS
Trigger: AGAGGATGGTGGATAACAGCAATTGACATTTTCAGC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCCCTCAGCTACGCTGTaGAGACCTCCCCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFPSATL*RPPPDF
Trigger: GAAGTCTGGGGGAGGTCTCCACAGCGTAGCTGAGGG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTCTCACACCTTGACATaGCCAGTTTCCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLSHTLT*PVSACS
Trigger: GCTGCAAGCGGAAACTGGCCATGTCAAGGTGTGAGA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAATATCGCATACAACGTaGACATCTGTACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAISHTT*TSVLCF
Trigger: GAAGCAAAGTACAGATGTCCACGTTGTATGCGATAT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAATTTCCCCCTCCTTTaGGTGAATTCCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSNFPLL*VNSSLD
Trigger: ATCAAGAGAGGAATTCACCCAAAGGAGGGGGAAATT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGAGCCACTGATTTTCTaGAGTGAATATAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAEPLIF*SEYKKQ
Trigger: CTGTTTCTTATATTCACTTCAGAAAATCAGTGGCTC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAACAATGTGGAGCCACTaGTTTTCTGAAGTGAATATA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHATMWSH*FSEVNI
Trigger: TATATTCACTTCAGAAAATCAGTGGCTCCACATTGT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCGTGCCCCAGCTTCCTaGGTAGCTGGAATTACAGGT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNRAPAS*VAGITG
Trigger: ACCTGTAATTCCAGCTACTCAGGAAGCTGGGGCACG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTCAAACAGGGTGCAATaGATGTGTTACTTTCGTATT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSSNRVQ*MCYFRI
Trigger: AATACGAAAGTAACACATTCATTGCACCCTGTTTGA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCTACTATCCGTCTCCTaGTTCACCTCCAATACGCCT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLLLSVS*FTSNTP
Trigger: AGGCGTATTGGAGGTGAAGCAGGAGACGGATAGTAG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR GCA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTGGACATCTGTACTTTaGTTCTTCTGTACCACAAGT +
Preference number: 4 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSWTSVL*FFCTTS
Trigger: ACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAAACTGGAGCTTCACATaGCAACAAAACTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHANWSFT*QQNCCF
Trigger: AAAACAACAGTTTTGTTGGCATGTGAAGCTCCAGTT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGATATTGGGTCTCAATaGTACAAACATCTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSDIGSQ*YKHLGF
Trigger: AAACCCTAGATGTTTGTAGCATTGAGACCCAATATC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCTGTCACCCAGGCAGTaGCCAGGAATGCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFLSPRQ*PGMQWN
Trigger: GTTCCACTGCATTCCTGGGCACTGCCTGGGTGACAG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCTTCCATTAGGCTCTaGCTCCCAACACTAGCACAT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPSIRL*LPTLAH
Trigger: ATGTGCTAGTGTTGGGAGGCAGAGCCTAATGGAAGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGGTAATGGAAACATATaGTATGTGCATCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSGNGNI*YVHLLK
Trigger: TTTGAGCAGATGCACATAGCATATGTTTCCATTACC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTCAACTCACGATCCTTaGCCTCTGCTGCCACTCTAT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLSTHDP*PLLPLY
Trigger: ATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCTCTTCCTTTACCTCTaGTTCACCCACCTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLLFLYL*FTHLRF
Trigger: GAAGCGAAGGTGGGTGAACCAGAGGTAAAGGAAGAG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATACCAAGGGTCCTTCTaGCATTATTGTTTTTCGATT +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAYQGSF*HYCFSI
Trigger: AATCGAAAAACAATAATGCCAGAAGGACCCTTGGTA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTACCAAGGGTCCTTCTaGCATTATTGTTTTTCGATT +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSYQGSF*HYCFSI
Trigger: AATCGAAAAACAATAATGCCAGAAGGACCCTTGGTA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTGGAAGGCTCAAGATTaGGCAGCTGTATCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLWKAQD*AAVSGE
Trigger: CTCACCAGATACAGCTGCCCAATCTTGAGCCTTCCA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCATGATTCTGGTGGCTaGAAGGCTCAAGATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLHDSGG*KAQDWA
Trigger: TGCCCAATCTTGAGCCTTCCAGCCACCAGAATCATG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
3UTR CAA 72 bp TCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTaGTCTGGAAGTTTTCACTTTCTTCTTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SANSPSMQSLLQ*SGSFHFLLPEK
Trigger: TTTTTCTGGAAGAAGAAAGTGAAAACTTCCAGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCTAGTCTCAAACACCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFLVSNT*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGTGTTTGAGACTAG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTATCTATCTGCCCCCATaGCCCAAACACCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLIYLPP*PKHLPL
Trigger: TAATGGAAGGTGTTTGGGTCATGGGGGCAGATAGAT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCCACGACAGCAAGAATaGGAACTCACTCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNPRQQE*ELTHPS
Trigger: ACTGGGGTGAGTGAGTTCTCATTCTTGCTGTCGTGG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCAAGATGACTGCTTTTaGCGTTTGGACCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNQDDCF*RLDPGP
Trigger: GGGTCCTGGGTCCAAACGTCAAAAGCAGTCATCTTG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCACCTCCAATACGCCTaGGTTCTCATCCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNHLQYA*VLILHL
Trigger: GAGGTGAAGGATGAGAACGCAGGCGTATTGGAGGTG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR GCA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTTTACACACTCTCCATaGATCAATTCCTCTTTTATG +
Preference number: 4 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSFTHSP*INSSFM
Trigger: CATAAAAGAGGAATTGATGCATGGAGAGTGTGTAAA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTGGCCAGTTTCCGCTTaGAGCCCACCGGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFWPVSA*SPPGDL
Trigger: TAAATCACCCGGTGGGCTGCAAGCGGAAACTGGCCA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTATGCTCATACCACTTaGACTCCAAGACCCCATCTC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLYAHTT*TPRPHL
Trigger: GAGATGGGGTCTTGGAGTGCAAGTGGTATGAGCATA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCTCTATCCTTCAATGTaGCTGCTGCACACCAATAGG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLLYPSM*LLHTNR
Trigger: CCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCTGCCTTCTGTACCTaGCCAGTCTATAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPAFCT*PVYNFL
Trigger: CAGGAAATTATAGACTGGCCAGGTACAGAAGGCAGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTCCTGTTCTACCCACTaGCCAGCCAACCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSCSTH*PANLPS
Trigger: AGAAGGCAGGTTGGCTGGCCAGTGGGTAGAACAGGA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR CCA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATACAGGGAAACAAACTaGATCAACTACATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAYRETN*INYILE
Trigger: TTCCAAAATGTAGTTGATCCAGTTTGTTTCCCTGTA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTACTGCTTTTGACGTTTaGACCCAGGACCCAGTCATT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLTAFDV*TQDPVI
Trigger: AATGACTGGGTCCTGGGTCCAAACGTCAAAAGCAGT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTAGTAACCCTTGCTTGTaGGAACTAATCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLSNPCL*ELIHSH
Trigger: GTGGGAATGGATTAGTTCTCACAAGCAAGGGTTACT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTATGGTCCGCTGTTCTTaGCACATCTTCCAAAAATCG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLMVRCS*HIFQKS
Trigger: CGATTTTTGGAAGATGTGGCAAGAACAGCGGACCAT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATACAATCTCAGCTCACTaGAAACTCTGCCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNTISAH*KLCHQG
Trigger: ACCCTGGTGGCAGAGTTTGCAGTGAGCTGAGATTGT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCAAATCCCACTACTTaGTACAGGGAAACAAACTGG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPNPTT*YRETNW
Trigger: CCAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCATGTGGGATCTATCTaGCCCCATGACCCAAACACC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHVGSI*PHDPNT
Trigger: GGTGTTTGGGTCATGGGGGCAGATAGATCCCACATG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTACTTTGTGGTTGACATaGGTGATCCTTGGGTTTCGT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLTLWLT*VILGFR
Trigger: ACGAAACCCAAGGATCACCCATGTCAACCACAAAGT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTGGAATGCCAACTTTGTaGTTGACATGGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLGMPTL*LTWVIL
Trigger: AAGGATCACCCATGTCAACCACAAAGTTGGCATTCC...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGGTGGAAGGATTGCTTaGGGCCACAAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFGGRIA*GHKFET
Trigger: GGTCTCAAATTTGTGGCCTCAAGCAATCCTTCCACC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATATCTATCTGCCCCCATaGCCCAAACACCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNIYLPP*PKHLPL
Trigger: TAATGGAAGGTGTTTGGGTCATGGGGGCAGATAGAT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTAATTTGAGGAAGCTATaGTCATACCACTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLNLRKL*SYHLHS
Trigger: GGAGTGCAAGTGGTATGAGCATAGCTTCCTCAAATT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCATGATTCTGGTGGCTaGAAGGCTCAAGATTGGGCA +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHDSGG*KAQDWA
Trigger: TGCCCAATCTTGAGCCTTCCAGCCACCAGAATCATG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATACTGCTTTTGACGTTTaGACCCAGGACCCAGTCATT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNTAFDV*TQDPVI
Trigger: AATGACTGGGTCCTGGGTCCAAACGTCAAAAGCAGT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATATTCCAATCACCCATTaGCAATACCCCAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNIPITH*QYPNQP
Trigger: TGGCTGATTGGGGTATTGTCAATGGGTGATTGGAAT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGTTTTATTTGGCTCATaGTTCTGGTGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFVLFGS*FWWLEG
Trigger: GCCTTCCAGCCACCAGAATCATGAGCCAAATAAAAC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGTGAGGGTCTCATGTTaGTTCCACTCTTGGTACAAA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNVRVSC*FHSWYK
Trigger: TTTGTACCAAGAGTGGAAGCAACATGAGACCCTCAC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTATATCGCATACAACGTaGACATCTGTACTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLISHTT*TSVLCF
Trigger: GAAGCAAAGTACAGATGTCCACGTTGTATGCGATAT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGCATCTCTAGAAATATaGTCCGCTGTTCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNASLEI*SAVLAT
Trigger: TGTGGCAAGAACAGCGGACCATATTTCTAGAGATGC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGTAATCCCAATGCTTTaGAGTCTGAGGTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNVIPML*SLRWKD
Trigger: ATCCTTCCACCTCAGACTCCAAAGCATTGGGATTAC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTAGTAACCCTTGCTTGTaGGAACTAATCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSNPCL*ELIHSH
Trigger: GTGGGAATGGATTAGTTCTCACAAGCAAGGGTTACT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTCAAACAGGGTGCAATaGATGTGTTACTTTCGTATT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLSNRVQ*MCYFRI
Trigger: AATACGAAAGTAACACATTCATTGCACCCTGTTTGA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCTTCAATGTGGCTGCTaGACACCAATAGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFLQCGC*TPIGGI
Trigger: AATTCCTCCTATTGGTGTGCAGCAGCCACATTGAAG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCATCAATGCAGAGTCTaGTGCAGTTGTCTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHQCRV*CSCLEV
Trigger: AACTTCCAGACAACTGCAGCAGACTCTGCATTGATG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTGTATGTTTCTCAAGTTaGAAGGACTCACTTTCTATG +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLVCFSS*KDSLSM
Trigger: CATAGAAAGTGAGTCCTTGCAACTTGAGAAACATAC...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTGATATTGGGTCTCAATaGTACAAACATCTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLDIGSQ*YKHLGF
Trigger: AAACCCTAGATGTTTGTAGCATTGAGACCCAATATC...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGTGAGGGTCTCATGTTaGTTCCACTCTTGGTACAAA +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFVRVSC*FHSWYK
Trigger: TTTGTACCAAGAGTGGAAGCAACATGAGACCCTCAC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGCATCTCTAGAAATATaGTCCGCTGTTCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFASLEI*SAVLAT
Trigger: TGTGGCAAGAACAGCGGACCATATTTCTAGAGATGC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATAATTTCCCCCTCCTTTaGGTGAATTCCTCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNNFPLL*VNSSLD
Trigger: ATCAAGAGAGGAATTCACCCAAAGGAGGGGGAAATT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGTATCTCTCAAATGCTaGTGCCACTGGGAAAAATTT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNVSLKC*CHWEKF
Trigger: AAATTTTTCCCAGTGGCATCAGCATTTGAGAGATAC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCAGTCTATAATTTCCTaGTTCACTACCGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFQSIIS*FTTVRS
Trigger: GGACCTAACGGTAGTGAAGCAGGAAATTATAGACTG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR TCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATACAATGTGGAGCCACTaGTTTTCTGAAGTGAATATA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNTMWSH*FSEVNI
Trigger: TATATTCACTTCAGAAAATCAGTGGCTCCACATTGT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTTTAAGTTAATACCTTaGCTCCGGGCACGATTTTTC +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFFKLIP*LRARFF
Trigger: GAAAAATCGTGCCCGGAGGCAAGGTATTAACTTAAA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATAACTGGAGCTTCACATaGCAACAAAACTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNNWSFT*QQNCCF
Trigger: AAAACAACAGTTTTGTTGGCATGTGAAGCTCCAGTT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTCTGCTGCAGTTGTCTaGAAGTTTTCACTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSAAVV*KFSLSS
Trigger: AGAAGAAAGTGAAAACTTCCAGACAACTGCAGCAGA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCCTCCAAAAAGATATTaGGTCTCAATGCTACAAACA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNPPKRY*VSMLQT
Trigger: TGTTTGTAGCATTGAGACCCAATATCTTTTTGGAGG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATATGCTGAACTTAACATaGGTCAAGGAGTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNMLNLT*VKEFVY
Trigger: GTAAACAAACTCCTTGACCCATGTTAAGTTCAGCAT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATTTTACACACTCTCCATaGATCAATTCCTCTTTTATG +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNFTHSP*INSSFM
Trigger: CATAAAAGAGGAATTGATGCATGGAGAGTGTGTAAA...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATACTATGCTGATCAAGTaGAAAGGAGAGTTCTTAATA +
Preference number: 4 (lower is better)
Translates to: DISKHSIKLVITTPFCSNTMLIK*KGEFLI
Trigger: TATTAAGAACTCTCCTTTGCACTTGATCAGCATAGT...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR GCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGTATGTTTCTCAAGTTaGAAGGACTCACTTTCTATG +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFVCFSS*KDSLSM
Trigger: CATAGAAAGTGAGTCCTTGCAACTTGAGAAACATAC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CCA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTACAGGGAAACAAACTaGATCAACTACATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFYRETN*INYILE
Trigger: TTCCAAAATGTAGTTGATCCAGTTTGTTTCCCTGTA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CCA 90 bp TCATCCTTCACCTCAGGCCTATCCTCCACCTCCTGTTCTACCCACTaGCCAGCCAACCTGCCTTCTGTACCTGGCCAGTCTATAATTTCC +
Preference number: 5 (lower is better)
Translates to: SSFTSGLSSTSCSTH*PANLPSVPGQSIIS
Trigger: GGAAATTATAGACTGGCCAGGTACAGAAGGCAGGTTGGCTGGCCAGTGGGTAGAACAGGAGGTGGAGGATAGGCCTGAGGTGAAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCCCAGGACCCAGTCATaGCCTGGACTTCCCTGTATA +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSPRTQS*PGLPCI
Trigger: TATACAGGGAAGTCCAGGCAATGACTGGGTCCTGGG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS TCA 90 bp GTCTCACACCTTGACATGGCCAGTTTCCGCTTGCAGCCCACCGGGTaGTTTATCGGAGGCTCTTCTTTCACCTTTGTATCATCCACGATT +
Preference number: 5 (lower is better)
Translates to: VSHLDMASFRLQPTG*FIGGSSFTFVSSTI
Trigger: AATCGTGGATGATACAAAGGTGAAAGAAGAGCCTCCGATAAATCACCCGGTGGGCTGCAAGCGGAAACTGGCCATGTCAAGGTGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 90 bp TGGCCAGCCAACCTGCCTTCTGTACCTGGCCAGTCTATAATTTCCTaGTTCACTACCGTTAGGTCCATCGGTATTTCCTCTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: WPANLPSVPGQSIIS*FTTVRSIGISSGLC
Trigger: ACAAAGGCCAGAGGAAATACCGATGGACCTAACGGTAGTGAAGCAGGAAATTATAGACTGGCCAGGTACAGAAGGCAGGTTGGCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS GCA 90 bp TCACCCACCTTCGCTTCTTTTACCACTAAACTACTATCCGTCTCCTaGTTCACCTCCAATACGCCTGCGTTCTCATCCTTCACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SPTFASFTTKLLSVS*FTSNTPAFSSFTSG
Trigger: GCCTGAGGTGAAGGATGAGAACGCAGGCGTATTGGAGGTGAAGCAGGAGACGGATAGTAGTTTAGTGGTAAAAGAAGCGAAGGTGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS CCA 90 bp TCAACTCACGATCCTTGGCCTCTGCTGCCACTCTATCCTTCAATGTaGCTGCTGCACACCAATAGGAGGAATTACCGGTCGGAATACCTA +
Preference number: 5 (lower is better)
Translates to: STHDPWPLLPLYPSM*LLHTNRRNYRSEYL
Trigger: TAGGTATTCCGACCGGTAATTCCTCCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CCA 90 bp ACTTCCCTTCATTTTCAGCAGCAAACTCCATCAACTCACGATCCTTaGCCTCTGCTGCCACTCTATCCTTCAATGTGGCTGCTGCACACC +
Preference number: 5 (lower is better)
Translates to: TSLHFQQQTPSTHDP*PLLPLYPSMWLLHT
Trigger: GGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAATGAAGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTATCAACTCACGATCCTaGGCCTCTGCTGCCACTCTA +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSINSRS*ASAATL
Trigger: TAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGAT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAATCAACTCACGATCCTaGGCCTCTGCTGCCACTCTA +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAINSRS*ASAATL
Trigger: TAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGAT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCAGGGTTTTGCCATGTaGGCCAGGCTAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSQGFAM*ARLVSN
Trigger: GTTTGAGACTAGCCTGGCCAACATGGCAAAACCCTG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 90 bp ATTTTCAGCAGCAAACTCCATCAACTCACGATCCTTGGCCTCTGCTaGCACTCTATCCTTCAATGTGGCTGCTGCACACCAATAGGAGGA +
Preference number: 5 (lower is better)
Translates to: IFSSKLHQLTILGLC*HSILQCGCCTPIGG
Trigger: TCCTCCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATATTTCCTCTGGCCTTaGTCCACTTCCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAYFLWP*STSFLS
Trigger: GGAGAGGAAGGAAGTGGACAAAGGCCAGAGGAAATA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAATGCCAACTTTGTGGTaGACATGGGTGATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAMPTLW*TWVILG
Trigger: CCCAAGGATCACCCATGTCAACCACAAAGTTGGCAT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTATGCCAACTTTGTGGTaGACATGGGTGATCCTTGGG +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSMPTLW*TWVILG
Trigger: CCCAAGGATCACCCATGTCAACCACAAAGTTGGCAT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 90 bp TTCATTTTCAGCAGCAAACTCCATCAACTCACGATCCTTGGCCTCTaGTGCCACTCTATCCTTCAATGTGGCTGCTGCACACCAATAGGA +
Preference number: 5 (lower is better)
Translates to: FIFSSKLHQLTILGL*CHSILQCGCCTPIG
Trigger: TCCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCATTCGAGCCCAGGAATTaGAGGAAGCTATGCTCATAC +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAFEPRN*RKLCSY
Trigger: GTATGAGCATAGCTTCCTCAAATTCCTGGGCTCGAA...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTTCGAGCCCAGGAATTaGAGGAAGCTATGCTCATAC +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSFEPRN*RKLCSY
Trigger: GTATGAGCATAGCTTCCTCAAATTCCTGGGCTCGAA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAAGGGAATGCCAACTTaGTGGTTGACATGGGTGATC +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSKGMPT*WLTWVI
Trigger: GATCACCCATGTCAACCACAAAGTTGGCATTCCCTT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACCCAAATCCCACTACTaGCTACAGGGAAACAAACTG +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAPKSHY*LQGNKL
Trigger: CAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGGG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGTGGACATCTGTACTTaGCTTCTTCTGTACCACAAG +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSVDICT*LLLYHK
Trigger: CTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCAC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACAGAGTCTGCTGCAGTaGTCTGGAAGTTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAQSLLQ*SGSFHF
Trigger: AAAGTGAAAACTTCCAGACAACTGCAGCAGACTCTG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAATTCCAATCACCCATaGACAATACCCCAATCAGCC +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSNSNHP*TIPQSA
Trigger: GGCTGATTGGGGTATTGTCAATGGGTGATTGGAATT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTGTAATCCCAATGCTTaGGAGTCTGAGGTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSCNPNA*ESEVEG
Trigger: TCCTTCCACCTCAGACTCCAAAGCATTGGGATTACA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCGAATTCTCCTTCCTCTaGGTGAATCCATTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSEFSFL*VNPLGR
Trigger: TCTACCCAATGGATTCACCAAGAGGAAGGAGAATTC...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGTAGGCTTTCAACCTTaGACGAATTACAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSVGFQP*TNYRIR
Trigger: TCTGATCCTGTAATTCGTCAAAGGTTGAAAGCCTAC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGCCTCCAAAAAGATATaGGGTCTCAATGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAASKKI*GLNATN
Trigger: GTTTGTAGCATTGAGACCCAATATCTTTTTGGAGGC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCCCAGGACCCAGTCATaGCCTGGACTTCCCTGTATA +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLPRTQS*PGLPCI
Trigger: TATACAGGGAAGTCCAGGCAATGACTGGGTCCTGGG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCACAAGTCTCACACCTaGACATGGCCAGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLHKSHT*TWPVSA
Trigger: AGCGGAAACTGGCCATGTCAAGGTGTGAGACTTGTG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTGTCCTTCTGGCATTATaGTTTTTCGATTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSVLLAL*FFDSLL
Trigger: GAGAAGAGAATCGAAAAACAATAATGCCAGAAGGAC...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAGTCCTTCTGGCATTATaGTTTTTCGATTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAVLLAL*FFDSLL
Trigger: GAGAAGAGAATCGAAAAACAATAATGCCAGAAGGAC...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCACTCTTGGTGAATCCATaGGGTAGAAGTTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHALLVNP*GRSFKL
Trigger: TAACTTAAAACTTCTACCCAATGGATTCACCAAGAG...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTTACTCAATGATCACTTaGTTCCTCAAATTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSYSMIT*FLKLSR
Trigger: CCTAGACAATTTGAGGAACAAAGTGATCATTGAGTA...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAGATTCACTCTTCACTaGGTGAAGAACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSRFTLH*VKNFHV
Trigger: GACATGAAAGTTCTTCACCAAGTGAAGAGTGAATCT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTAAACTACAGGATAGTTaGTTTTCTGTCCAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSKLQDS*FSVQVS
Trigger: TGAAACCTGGACAGAAAACAAACTATCCTGTAGTTT...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAGGGAATGCCAACTTTGTGGTTGACATGGGTGATCCTTGGGTTTCGTCACGCAAAACTACAGGATAGTTaGTTTTCTGTCCAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: KGMPTLWLTWVILGFRHAKLQDS*FSVQVS
Trigger: TGAAACCTGGACAGAAAACAAACTATCCTGTAGTTT...TGCGTGACGAAACCCAAGGATCACCCATGTCAACCACAAAGTTGGCATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp ACAATACCCCAATCAGCCAACAGCCCATCAATGCAGAGTCTGCTGCAGTTGTCTCATGCTGACACTATTTaGAGTTTTTGTCACTTGCAT +
Preference number: 5 (lower is better)
Translates to: TIPQSANSPSMQSLLQLSHADTI*SFCHLH
Trigger: ATGCAAGTGACAAAAACTCAAAATAGTGTCAGCATG...AGACAACTGCAGCAGACTCTGCATTGATGGGCTGTTGGCTGATTGGGGTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCAATGCTCAATTTTCATaGCCAACGTTCTTGGTAGAT +
Preference number: 5 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSNAQFS*PTFLVD
Trigger: ATCTACCAAGAACGTTGGCAATGAAAATTGAGCATT...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GGCATTAGTTTATTCATGTGGGATCTATCTGCCCCCATGACCCAAACACCTTCCTGTATGTTTCTCAAGTaGCAAGGACTCACTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GISLFMWDLSAPMTQTPSCMFLK*QGLTFY
Trigger: ATAGAAAGTGAGTCCTTGCAACTTGAGAAACATACA...GGAAGGTGTTTGGGTCATGGGGGCAGATAGATCCCACATGAATAAACTAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCACAAGTCTCACACCTaGACATGGCCAGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHKSHT*TWPVSA
Trigger: AGCGGAAACTGGCCATGTCAAGGTGTGAGACTTGTG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCATGTCAGTTCTGCTTaGTGTTTCTTTACACAGGGC +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLHVSSA*CFFTQG
Trigger: GCCCTGTGTAAAGAAACACAAAGCAGAACTGACATG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTTATGGTCCGCTGTTCTaGCCACATCTTCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLYGPLF*PHLPKI
Trigger: GATTTTTGGAAGATGTGGCAAGAACAGCGGACCATA...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTATTTCCTCTGGCCTTaGTCCACTTCCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFYFLWP*STSFLS
Trigger: GGAGAGGAAGGAAGTGGACAAAGGCCAGAGGAAATA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTGCCTCCAAAAAGATATaGGGTCTCAATGCTACAAAC +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLASKKI*GLNATN
Trigger: GTTTGTAGCATTGAGACCCAATATCTTTTTGGAGGC...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTCATGGGTCAAGGAGTTaGTTTACACACCAGAATTTG +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLHGSRS*FTHQNL
Trigger: CAAATTCTGGTGTGTAAACAAACTCCTTGACCCATG...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATCCCAAATCCCACTACTaGCTACAGGGAAACAAACTG +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNPKSHY*LQGNKL
Trigger: CAGTTTGTTTCCCTGTAGCAAGTAGTGGGATTTGGG...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGTGGACATCTGTACTTaGCTTCTTCTGTACCACAAG +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNVDICT*LLLYHK
Trigger: CTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCAC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGAATTCTCCTTCCTCTaGGTGAATCCATTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNEFSFL*VNPLGR
Trigger: TCTACCCAATGGATTCACCAAGAGGAAGGAGAATTC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTATGGTCCGCTGTTCTaGCCACATCTTCCAAAAATC +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFYGPLF*PHLPKI
Trigger: GATTTTTGGAAGATGTGGCAAGAACAGCGGACCATA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGTAGGCTTTCAACCTTaGACGAATTACAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNVGFQP*TNYRIR
Trigger: TCTGATCCTGTAATTCGTCAAAGGTTGAAAGCCTAC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AAAAAGCCAGGGCCTAATAAGTACTATGCTGATCAAGTGCAAAGGAGAGTTCTTAATGCTCAATTTTCATaGCCAACGTTCTTGGTAGAT +
Preference number: 5 (lower is better)
Translates to: KKPGPNKYYADQVQRRVLNAQFS*PTFLVD
Trigger: ATCTACCAAGAACGTTGGCAATGAAAATTGAGCATT...AAGAACTCTCCTTTGCACTTGATCAGCATAGTACTTATTAGGCCCTGGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGCTCTTCTTTCACCTTaGTATCATCCACGATTTCTT +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNALLSP*YHPRFL
Trigger: AAGAAATCGTGGATGATACAAAGGTGAAAGAAGAGC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTCATTGCCAACGTTCTaGGTAGATTCACTCTTCACT +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSLPTF*VDSLFT
Trigger: AGTGAAGAGTGAATCTACCAAGAACGTTGGCAATGA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATGATCGCAAGTTCTTTTaGTATACGTTATCCCACTTC +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNDRKFF*YTLSHF
Trigger: GAAGTGGGATAACGTATACAAAAAGAACTTGCGATC...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCATGGGTCAAGGAGTTaGTTTACACACCAGAATTTG +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHGSRS*FTHQNL
Trigger: CAAATTCTGGTGTGTAAACAAACTCCTTGACCCATG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATTACTCAATGATCACTTaGTTCCTCAAATTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNYSMIT*FLKLSR
Trigger: CCTAGACAATTTGAGGAACAAAGTGATCATTGAGTA...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTAGATTCACTCTTCACTaGGTGAAGAACTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFRFTLH*VKNFHV
Trigger: GACATGAAAGTTCTTCACCAAGTGAAGAGTGAATCT...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp GACATATCAAAACACAGTATAAAACTGGTCATCACAACACCCTTCTGCAGTAATTCTCTTACAGTCATATaGCAGTTTCACAGTGGTATA +
Preference number: 5 (lower is better)
Translates to: DISKHSIKLVITTPFCSNSLTVI*QFHSGI
Trigger: TATACCACTGTGAAACTGCAATATGACTGTAAGAGA...ATTACTGCAGAAGGGTGTTGTGATGACCAGTTTTATACTGTGTTTTGATATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTGATCGCAAGTTCTTTTaGTATACGTTATCCCACTTC +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFDRKFF*YTLSHF
Trigger: GAAGTGGGATAACGTATACAAAAAGAACTTGCGATC...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCTCTTGGTGAATCCATaGGGTAGAAGTTTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFLLVNP*GRSFKL
Trigger: TAACTTAAAACTTCTACCCAATGGATTCACCAAGAG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTCTCTTACAGTCATATaGCAGTTTCACAGTGGTATA +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFSLTVI*QFHSGI
Trigger: TATACCACTGTGAAACTGCAATATGACTGTAAGAGA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTTGTATGTTTCTCAAGTaGCAAGGACTCACTTTCTAT +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFCMFLK*QGLTFY
Trigger: ATAGAAAGTGAGTCCTTGCAACTTGAGAAACATACA...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCAATTCATCTATTTCTaGCTGGTTTCAAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFQFIYF*LVSRRH
Trigger: GTGTCTTCTTGAAACCAGCAAGAAATAGATGAATTG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS-3UTR CAA 90 bp AATCACATTCCATTAGTACTTTCATACCAAGGGTCCTTCTGGCATTATTGTTTTCATGCTGACACTATTTaGAGTTTTTGTCACTTGCAT +
Preference number: 5 (lower is better)
Translates to: NHIPLVLSYQGSFWHYCFHADTI*SFCHLH
Trigger: ATGCAAGTGACAAAAACTCAAAATAGTGTCAGCATG...AAAACAATAATGCCAGAAGGACCCTTGGTATGAAAGTACTAATGGAATGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp GGCCTCTGCTGCCACTCTATCCTTCAATGTGGCTGCTaGACACCAATAGGAGGAATTACCGGTCGGAATACC +
Preference number: 6 (lower is better)
Translates to: GLCCHSILQCGC*TPIGGITGRNT
Trigger: GGTATTCCGACCGGTAATTCCTCCTATTGGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp AGCAAACTCCATCAACTCACGATCCTTGGCCTCTGCTaGCACTCTATCCTTCAATGTGGCTGCTGCACACCA +
Preference number: 6 (lower is better)
Translates to: SKLHQLTILGLC*HSILQCGCCTP
Trigger: TGGTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp AGCAGCAAACTCCATCAACTCACGATCCTTGGCCTCTaGTGCCACTCTATCCTTCAATGTGGCTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: SSKLHQLTILGL*CHSILQCGCCT
Trigger: TGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 90 bp GACTTCCCTTCATTTTCAGCAGCAAACTCCATCAACTCACGATCCTaGGCCTCTGCTGCCACTCTATCCTTCAATGTGGCTGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: DFPSFSAANSINSRS*ASAATLSFNVAAAH
Trigger: GTGTGCAGCAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAATGAAGGGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS TCA 72 bp CTTGACATGGCCAGTTTCCGCTTGCAGCCCACCGGGTaGTTTATCGGAGGCTCTTCTTTCACCTTTGTATCA +
Preference number: 6 (lower is better)
Translates to: LDMASFRLQPTG*FIGGSSFTFVS
Trigger: TGATACAAAGGTGAAAGAAGAGCCTCCGATAAATCACCCGGTGGGCTGCAAGCGGAAACTGGCCATGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CCA 72 bp CATTTTCAGCAGCAAACTCCATCAACTCACGATCCTTaGCCTCTGCTGCCACTCTATCCTTCAATGTGGCTG +
Preference number: 6 (lower is better)
Translates to: HFQQQTPSTHDP*PLLPLYPSMWL
Trigger: CAGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 72 bp TCATTTTCAGCAGCAAACTCCATCAACTCACGATCCTaGGCCTCTGCTGCCACTCTATCCTTCAATGTGGCT +
Preference number: 6 (lower is better)
Translates to: SFSAANSINSRS*ASAATLSFNVA
Trigger: AGCCACATTGAAGGATAGAGTGGCAGCAGAGGCCAAGGATCGTGAGTTGATGGAGTTTGCTGCTGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 90 bp AGGGCAAACTGCAGGAATATCGCATACAACGTGGACATCTGTACTTaGCTTCTTCTGTACCACAAGTCTCACACCTTGACATGGCCAGTT +
Preference number: 6 (lower is better)
Translates to: RANCRNIAYNVDICT*LLLYHKSHTLTWPV
Trigger: AACTGGCCATGTCAAGGTGTGAGACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCACGTTGTATGCGATATTCCTGCAGTTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp AACCTGCCTTCTGTACCTGGCCAGTCTATAATTTCCTaGTTCACTACCGTTAGGTCCATCGGTATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: NLPSVPGQSIIS*FTTVRSIGISS
Trigger: AGAGGAAATACCGATGGACCTAACGGTAGTGAAGCAGGAAATTATAGACTGGCCAGGTACAGAAGGCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS GCA 72 bp TTCGCTTCTTTTACCACTAAACTACTATCCGTCTCCTaGTTCACCTCCAATACGCCTGCGTTCTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: FASFTTKLLSVS*FTSNTPAFSSF
Trigger: GAAGGATGAGAACGCAGGCGTATTGGAGGTGAAGCAGGAGACGGATAGTAGTTTAGTGGTAAAAGAAGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370574.4
CDS CCA 72 bp TACACAGGGCAAACTGCAGGAATATCGCATACAACGTaGACATCTGTACTTTGCTTCTTCTGTACCACAAGT +
Preference number: 6 (lower is better)
Translates to: YTGQTAGISHTT*TSVLCFFCTTS
Trigger: ACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCACGTTGTATGCGATATTCCTGCAGTTTGCCCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 72 bp TGCAGGAATATCGCATACAACGTGGACATCTGTACTTaGCTTCTTCTGTACCACAAGTCTCACACCTTGACA +
Preference number: 6 (lower is better)
Translates to: CRNIAYNVDICT*LLLYHKSHTLT
Trigger: TGTCAAGGTGTGAGACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCACGTTGTATGCGATATTCCTGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp TGCAGTTTTATCTCGAACTCCATTACATGTCAGTTCTaGTTTGTGTTTCTTTACACAGGGCAAACTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CSFISNSITCQF*FVFLYTGQTAG
Trigger: TCCTGCAGTTTGCCCTGTGTAAAGAAACACAAAGCAGAACTGACATGTAATGGAGTTCGAGATAAAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 72 bp AAAAAGGTTGAATTCTCCTTCCTCTTGGTGAATCCATaGGGTAGAAGTTTTAAGTTAATACCTTGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: KKVEFSFLLVNP*GRSFKLIPCLR
Trigger: CCGGAGGCAAGGTATTAACTTAAAACTTCTACCCAATGGATTCACCAAGAGGAAGGAGAATTCAACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS CAA 90 bp ATGTATGCAGTTTTATCTCGAACTCCATTACATGTCAGTTCTGCTTaGTGTTTCTTTACACAGGGCAAACTGCAGGAATATCGCATACAA +
Preference number: 6 (lower is better)
Translates to: MYAVLSRTPLHVSSA*CFFTQGKLQEYRIQ
Trigger: TTGTATGCGATATTCCTGCAGTTTGCCCTGTGTAAAGAAACACAAAGCAGAACTGACATGTAATGGAGTTCGAGATAAAACTGCATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS GCA 72 bp GTGAATCCATTGGGTAGAAGTTTTAAGTTAATACCTTaGCTCCGGGCACGATTTTTCATAAAGTACATATAT +
Preference number: 6 (lower is better)
Translates to: VNPLGRSFKLIP*LRARFFIKYIY
Trigger: ATATATGTACTTTATGAAAAATCGTGCCCGGAGGCAAGGTATTAACTTAAAACTTCTACCCAATGGATTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6
CDS TCA 72 bp ATCCTTTCAATACCACATGTAATGTTGGATACTCAATaGTCACTTTGTTCCTCAAATTGTCTAGGAGACTTT +
Preference number: 6 (lower is better)
Translates to: ILSIPHVMLDTQ*SLCSSNCLGDF
Trigger: AAAGTCTCCTAGACAATTTGAGGAACAAAGTGATCATTGAGTATCCAACATTACATGTGGTATTGAAAGGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370574.4
ENST00000431532.6