Pregenerated sensors for ZNHIT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106400Ensembl transcript IDs: ENST00000461205.5, ENST00000485387.1, ENST00000492315.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGCAGGGCACGCAAAGTTACAGGGCTTCCAAGAAAGAGCAGTGTaGCCGCCGCTCTGGGCAGGGCGAGGAAGGCACCCGGGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GAGHAKLQGFQERAV*PPLWAGRGRHPGWK Trigger: CTTCCACCCCGGGTGCCTTCCTCGCCCTGCCCAGAGCGGCGGCCACACTGCTCTTTCTTGGAAGCCCTGTAACTTTGCGTGCCCTGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 90 bp | GGTGGAAGCTGCAGCTCTCTGATCTCATCCCCATTGCCAAGCCCTTaGTCCCCTTGTCTCCTCCCGGGCCAAGCCCTGGGCCCACACTTC | + |
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Preference number: 5 (lower is better) Translates to: GGSCSSLISSPLPSP*SPCLLPGQALGPHF Trigger: GAAGTGTGGGCCCAGGGCTTGGCCCGGGAGGAGACAAGGGGACCAAGGGCTTGGCAATGGGGATGAGATCAGAGAGCTGCAGCTTCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 90 bp | GCAAAGTTACAGGGCTTCCAAGAAAGAGCAGTGTGGCCGCCGCTCTaGGCAGGGCGAGGAAGGCACCCGGGGTGGAAGCTGCAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: AKLQGFQERAVWPPL*AGRGRHPGWKLQLS Trigger: AGAGAGCTGCAGCTTCCACCCCGGGTGCCTTCCTCGCCCTGCCCAGAGCGGCGGCCACACTGCTCTTTCTTGGAAGCCCTGTAACTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 90 bp | CCATGCTTGGATACGCTCATCTTCCAGGCCACCTACCCACAAACGTaGTGCCAAGTGGGCACACCCCTGCCCTGGAGCGCCCCAAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: PCLDTLIFQATYPQT*CQVGTPLPWSAPSP Trigger: GGGACTTGGGGCGCTCCAGGGCAGGGGTGTGCCCACTTGGCATCACGTTTGTGGGTAGGTGGCCTGGAAGATGAGCGTATCCAAGCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 90 bp | TCCTCCCGGGCCAAGCCCTGGGCCCACACTTCCTGTCCCGCCAGCTaGGACCCTTTCAGTTTCTCCTGCCTGTTTTCTCCGCCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSRAKPWAHTSCPAS*DPFSFSCLFSPPSS Trigger: AGAGGAAGGCGGAGAAAACAGGCAGGAGAAACTGAAAGGGTCTCAGCTGGCGGGACAGGAAGTGTGGGCCCAGGGCTTGGCCCGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 90 bp | ATACGCTCATCTTCCAGGCCACCTACCCACAAACGTGATGCCAAGTaGGCACACCCCTGCCCTGGAGCGCCCCAAGTCCCACCACTGACC | + |
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Preference number: 5 (lower is better) Translates to: IRSSSRPPTHKRDAK*AHPCPGAPQVPPLT Trigger: GGTCAGTGGTGGGACTTGGGGCGCTCCAGGGCAGGGGTGTGCCCACTTGGCATCACGTTTGTGGGTAGGTGGCCTGGAAGATGAGCGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS GCA 90 bp | CCTTCAAGCTTTCACAGTCCCCTGCCTCCCAGAACCTGGGCTAGATaGCACGTCTCCCTGTTCCCAGGCGCTGTGCTTCCCTCTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: PSSFHSPLPPRTWAR*HVSLFPGAVLPSAI Trigger: TATGGCAGAGGGAAGCACAGCGCCTGGGAACAGGGAGACGTGGCATCTAGCCCAGGTTCTGGGAGGCAGGGGACTGTGAAAGCTTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 90 bp | ACAGCGCCCTGGGGCTTCCAGGCTGTCCTGGGCCCTCAATACACATaGCCCTCACACTCAGCATCTCACCTCCTACCTCAAAGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: TAPWGFQAVLGPQYT*PSHSASHLLPQRNQ Trigger: CTGGTTCCTTTGAGGTAGGAGGTGAGATGCTGAGTGTGAGGGCCATGTGTATTGAGGGCCCAGGACAGCCTGGAAGCCCCAGGGCGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 90 bp | CTCTTCATCCCCAGCGCCCGGCTTGGAGCAGGCACCAATAAAACGTaGATGAAGGGTCAACGCCAGGACCCGAGGGCTGAGGAAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: LFIPSARLGAGTNKT*MKGQRQDPRAEEGI Trigger: AATCCCTTCCTCAGCCCTCGGGTCCTGGCGTTGACCCTTCATTCACGTTTTATTGGTGCCTGCTCCAAGCCGGGCGCTGGGGATGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 90 bp | AGCATCTCACCTCCTACCTCAAAGGAACCAGGGGCCACCCATGCTTaGATACGCTCATCTTCCAGGCCACCTACCCACAAACGTGATGCC | + |
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Preference number: 5 (lower is better) Translates to: SISPPTSKEPGATHA*IRSSSRPPTHKRDA Trigger: GGCATCACGTTTGTGGGTAGGTGGCCTGGAAGATGAGCGTATCCAAGCATGGGTGGCCCCTGGTTCCTTTGAGGTAGGAGGTGAGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 90 bp | AGCGAGAGCCCGTCACCACATAACAAATTAAAAATTAACCAGGCGTaGGGCCTCATGCTTGCAGTTCCAGCCACTCCGGAGGCTGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SESPSPHNKLKINQA*GLMLAVPATPEAEV Trigger: CACCTCAGCCTCCGGAGTGGCTGGAACTGCAAGCATGAGGCCCCACGCCTGGTTAATTTTTAATTTGTTATGTGGTGACGGGCTCTCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000461205.5 ENST00000492315.5 |
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| CDS CCA 90 bp | CATCTTCAACCCCTCCTCCTCAACCGGCACTTTCCATCAAAGAGCTaGCGACGCTCATGTGTCTACTCGGCTTCACAGCTCCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HLQPLLLNRHFPSKS*RRSCVYSASQLLLL Trigger: AAGGAGAAGGAGCTGTGAAGCCGAGTAGACACATGAGCGTCGCCAGCTCTTTGATGGAAAGTGCCGGTTGAGGAGGAGGGGTTGAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS GCA 90 bp | GTAAGTACAGCATGGAGTAGGCTAGGATACGGAAGTATAAAGTGCTaGAGAGCCCAGGACAGAAACACCCAACCTGGCCTTGGAGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: VSTAWSRLGYGSIKC*RAQDRNTQPGLGVV Trigger: GACTACTCCAAGGCCAGGTTGGGTGTTTCTGTCCTGGGCTCTGCAGCACTTTATACTTCCGTATCCTAGCCTACTCCATGCTGTACTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS TCA 90 bp | TGTCTACTCGGCTTCACAGCTCCTTCTCCTTCACAGCAACTCACGTaGTGTGTCACTTTTTCACCTCCCATCCTCTCCTTGAACCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: CLLGFTAPSPSQQLT*CVTFSPPILSLNPK Trigger: TTTGGGGTTCAAGGAGAGGATGGGAGGTGAAAAAGTGACACATCACGTGAGTTGCTGTGAAGGAGAAGGAGCTGTGAAGCCGAGTAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 90 bp | CCCCAGCCTTCGATCCTTTCTTATTACTCTGTAAGATCCAAACTGTaGACTTGGCTTCCTAAGCGACTTGCTTTTTCTTGCTTCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: PQPSILSYYSVRSKL*TWLPKRLAFSCFTA Trigger: GGCAGTGAAGCAAGAAAAAGCAAGTCGCTTAGGAAGCCAAGTTCACAGTTTGGATCTTACAGAGTAATAAGAAAGGATCGAAGGCTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 90 bp | ATTCCCATCCAAGTCTGCTTCTCCTGCAGATTCTCTCTACGCAAATaGAACCGTCTATGCAGACATCCAAACCAGAAACCTAGAAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: IPIQVCFSCRFSLRK*NRLCRHPNQKPRSY Trigger: ATAACTTCTAGGTTTCTGGTTTGGATGTCTGCATAGACGGTTCCATTTGCGTAGAGAGAATCTGCAGGAGAAGCAGACTTGGATGGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS GCA 72 bp | AACACAGAACCTGCTCCCGGGCTCCAGAACTGGCCATaGAGCCAGCGCCTGGTGAGGCCGGGTGTGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: NTEPAPGLQNWP*SQRLVRPGVVA Trigger: CGCCACCACACCCGGCCTCACCAGGCGCTGGCTGCATGGCCAGTTCTGGAGCCCGGGAGCAGGTTCTGTGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS CCA 72 bp | CAGGGCTTCCAAGAAAGAGCAGTGTGGCCGCCGCTCTaGGCAGGGCGAGGAAGGCACCCGGGGTGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGFQERAVWPPL*AGRGRHPGWKL Trigger: CAGCTTCCACCCCGGGTGCCTTCCTCGCCCTGCCCAGAGCGGCGGCCACACTGCTCTTTCTTGGAAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CAA 72 bp | GAGGCTGCGGTGGGAGGACTACATGGGCCCGGGAGGTaGAGGCTGCAGTGTGCAGCAAGCCGTGATCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: EAAVGGLHGPGR*RLQCAASRDRA Trigger: GGCGCGATCACGGCTTGCTGCACACTGCAGCCTCAACCTCCCGGGCCCATGTAGTCCTCCCACCGCAGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS TCA 72 bp | AGGCTGCGGTGGGAGGACTACATGGGCCCGGGAGGTTaGGGCTGCAGTGTGCAGCAAGCCGTGATCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RLRWEDYMGPGG*GCSVQQAVIAP Trigger: TGGCGCGATCACGGCTTGCTGCACACTGCAGCCTCAACCTCCCGGGCCCATGTAGTCCTCCCACCGCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS CCA 72 bp | TCTTCCAGGCCACCTACCCACAAACGTGATGCCAAGTaGGCACACCCCTGCCCTGGAGCGCCCCAAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSRPPTHKRDAK*AHPCPGAPQVP Trigger: TGGGACTTGGGGCGCTCCAGGGCAGGGGTGTGCCCACTTGGCATCACGTTTGTGGGTAGGTGGCCTGGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CAA 72 bp | CTGCAGCTCTCTGATCTCATCCCCATTGCCAAGCCCTaGGTCCCCTTGTCTCCTCCCGGGCCAAGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQLSDLIPIAKP*VPLSPPGPSPG Trigger: CCCAGGGCTTGGCCCGGGAGGAGACAAGGGGACCAAGGGCTTGGCAATGGGGATGAGATCAGAGAGCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CAA 90 bp | GGGTGGAAGCTGCAGCTCTCTGATCTCATCCCCATTGCCAAGCCCTaGGTCCCCTTGTCTCCTCCCGGGCCAAGCCCTGGGCCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: GWKLQLSDLIPIAKP*VPLSPPGPSPGPTL Trigger: AAGTGTGGGCCCAGGGCTTGGCCCGGGAGGAGACAAGGGGACCAAGGGCTTGGCAATGGGGATGAGATCAGAGAGCTGCAGCTTCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 72 bp | GATACGCTCATCTTCCAGGCCACCTACCCACAAACGTaGTGCCAAGTGGGCACACCCCTGCCCTGGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: DTLIFQATYPQT*CQVGTPLPWSA Trigger: GGCGCTCCAGGGCAGGGGTGTGCCCACTTGGCATCACGTTTGTGGGTAGGTGGCCTGGAAGATGAGCGTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS GCA 72 bp | TTTCACAGTCCCCTGCCTCCCAGAACCTGGGCTAGATaGCACGTCTCCCTGTTCCCAGGCGCTGTGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FHSPLPPRTWAR*HVSLFPGAVLP Trigger: GGGAAGCACAGCGCCTGGGAACAGGGAGACGTGGCATCTAGCCCAGGTTCTGGGAGGCAGGGGACTGTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS TCA 72 bp | GCCAAGCCCTGGGCCCACACTTCCTGTCCCGCCAGCTaGGACCCTTTCAGTTTCTCCTGCCTGTTTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: AKPWAHTSCPAS*DPFSFSCLFSP Trigger: CGGAGAAAACAGGCAGGAGAAACTGAAAGGGTCTCAGCTGGCGGGACAGGAAGTGTGGGCCCAGGGCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 72 bp | CCTTCAAGCTTTCACAGTCCCCTGCCTCCCAGAACCTaGGCTAGATGCCACGTCTCCCTGTTCCCAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PSSFHSPLPPRT*ARCHVSLFPGA Trigger: AGCGCCTGGGAACAGGGAGACGTGGCATCTAGCCCAGGTTCTGGGAGGCAGGGGACTGTGAAAGCTTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS TCA 72 bp | AACGTGAATGAAGGGTCAACGCCAGGACCCGAGGGCTaGGGAAGGGATTTACGAGGAATAGCTGGGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NVNEGSTPGPEG*GRDLRGIAGAG Trigger: CCCGGCCCCAGCTATTCCTCGTAAATCCCTTCCTCAGCCCTCGGGTCCTGGCGTTGACCCTTCATTCACGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS GCA 72 bp | CTCACCTCCTACCTCAAAGGAACCAGGGGCCACCCATaGTTGGATACGCTCATCTTCCAGGCCACCTACCCA | + |
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Preference number: 6 (lower is better) Translates to: LTSYLKGTRGHP*LDTLIFQATYP Trigger: TGGGTAGGTGGCCTGGAAGATGAGCGTATCCAAGCATGGGTGGCCCCTGGTTCCTTTGAGGTAGGAGGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 72 bp | CCCCTCCTCCTCAACCGGCACTTTCCATCAAAGAGCTaGCGACGCTCATGTGTCTACTCGGCTTCACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PLLLNRHFPSKS*RRSCVYSASQL Trigger: GAGCTGTGAAGCCGAGTAGACACATGAGCGTCGCCAGCTCTTTGATGGAAAGTGCCGGTTGAGGAGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS CCA 72 bp | TGGGGCTTCCAGGCTGTCCTGGGCCCTCAATACACATaGCCCTCACACTCAGCATCTCACCTCCTACCTCAA | + |
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Preference number: 6 (lower is better) Translates to: WGFQAVLGPQYT*PSHSASHLLPQ Trigger: TTGAGGTAGGAGGTGAGATGCTGAGTGTGAGGGCCATGTGTATTGAGGGCCCAGGACAGCCTGGAAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS TCA 72 bp | CCAGCACTTTGGAAGGCCCACGCAGGAGGATCGCTTTaGGGCCAAGAGTTGGAGACCAACCTGGGCAACATA | + |
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Preference number: 6 (lower is better) Translates to: PALWKAHAGGSL*GQELETNLGNI Trigger: TATGTTGCCCAGGTTGGTCTCCAACTCTTGGCCTCAAAGCGATCCTCCTGCGTGGGCCTTCCAAAGTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 72 bp | CCTCCTACCTCAAAGGAACCAGGGGCCACCCATGCTTaGATACGCTCATCTTCCAGGCCACCTACCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: PPTSKEPGATHA*IRSSSRPPTHK Trigger: TTTGTGGGTAGGTGGCCTGGAAGATGAGCGTATCCAAGCATGGGTGGCCCCTGGTTCCTTTGAGGTAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485387.1 |
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| CDS GCA 72 bp | ACAGCATGGAGTAGGCTAGGATACGGAAGTATAAAGTaGTGCAGAGCCCAGGACAGAAACACCCAACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TAWSRLGYGSIK*CRAQDRNTQPG Trigger: GCCAGGTTGGGTGTTTCTGTCCTGGGCTCTGCAGCACTTTATACTTCCGTATCCTAGCCTACTCCATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 72 bp | CCGTCACCACATAACAAATTAAAAATTAACCAGGCGTaGGGCCTCATGCTTGCAGTTCCAGCCACTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSPHNKLKINQA*GLMLAVPATPE Trigger: CTCCGGAGTGGCTGGAACTGCAAGCATGAGGCCCCACGCCTGGTTAATTTTTAATTTGTTATGTGGTGACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000461205.5 ENST00000492315.5 |
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| CDS CAA 90 bp | GAACTTGGCTTCCTAAGCGACTTGCTTTTTCTTGCTTCACTGCCTTaGCACGTGAGGTTCCCACTGAGAGAAACCCTAACTAGACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ELGFLSDLLFLASLP*HVRFPLRETLTRLS Trigger: TGAAAGTCTAGTTAGGGTTTCTCTCAGTGGGAACCTCACGTGCAAAGGCAGTGAAGCAAGAAAAAGCAAGTCGCTTAGGAAGCCAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 72 bp | CAAGTCTGCTTCTCCTGCAGATTCTCTCTACGCAAATaGAACCGTCTATGCAGACATCCAAACCAGAAACCT | + |
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Preference number: 6 (lower is better) Translates to: QVCFSCRFSLRK*NRLCRHPNQKP Trigger: AGGTTTCTGGTTTGGATGTCTGCATAGACGGTTCCATTTGCGTAGAGAGAATCTGCAGGAGAAGCAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS CAA 72 bp | TTCCTAAGCGACTTGCTTTTTCTTGCTTCACTGCCTTaGCACGTGAGGTTCCCACTGAGAGAAACCCTAACT | + |
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Preference number: 6 (lower is better) Translates to: FLSDLLFLASLP*HVRFPLRETLT Trigger: AGTTAGGGTTTCTCTCAGTGGGAACCTCACGTGCAAAGGCAGTGAAGCAAGAAAAAGCAAGTCGCTTAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 72 bp | TTAAGAAATGTGTCCAAAGTTCACATAGCTAACAAGTaGCCAGGTCAGGAGTCAAAGAACTACCCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LRNVSKVHIANK*PGQESKNYPAS Trigger: TGATGCTGGGTAGTTCTTTGACTCCTGACCTGGCCACTTGTTAGCTATGTGAACTTTGGACACATTTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS TCA 72 bp | TCGATCCTTTCTTATTACTCTGTAAGATCCAAACTGTaGACTTGGCTTCCTAAGCGACTTGCTTTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SILSYYSVRSKL*TWLPKRLAFSC Trigger: GCAAGAAAAAGCAAGTCGCTTAGGAAGCCAAGTTCACAGTTTGGATCTTACAGAGTAATAAGAAAGGATCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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| CDS CCA 72 bp | CAACACTTGAACCATTTAACCCTTACAACAGCTGTATaGGACAGTATCATCATCCCCAATTTACCAACATTC | + |
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Preference number: 6 (lower is better) Translates to: QHLNHLTLTTAV*DSIIIPNLPTF Trigger: GAATGTTGGTAAATTGGGGATGATGATACTGTCCCATACAGCTGTTGTAAGGGTTAAATGGTTCAAGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485387.1 ENST00000492315.5 |
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| CDS CCA 72 bp | CAAATGATTAATGAAACAAACACAGTAAGTACAGCATaGAGTAGGCTAGGATACGGAAGTATAAAGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QMINETNTVSTA*SRLGYGSIKCC Trigger: GCAGCACTTTATACTTCCGTATCCTAGCCTACTCCATGCTGTACTTACTGTGTTTGTTTCATTAATCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492315.5 |
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