Pregenerated sensors for ZNF90 (Homo sapiens)
Ensembl gene IDs: ENSG00000213988Ensembl transcript IDs: ENST00000418063.3, ENST00000469078.5, ENST00000484032.1, ENST00000492328.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAGGCACTAGAATTGCTTGAACCTTGGAGGCGGAGGTTGCAGTaGGTCAAGATCACGGCACTGCCCTTCAGCTTGAGCGACAGAATG | + |
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Preference number: 1 (lower is better) Translates to: AEALELLEPWRRRLQ*VKITALPFSLSDRM Trigger: CATTCTGTCGCTCAAGCTGAAGGGCAGTGCCGTGATCTTGACCCACTGCAACCTCCGCCTCCAAGGTTCAAGCAATTCTAGTGCCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR CCA 90 bp | ATCTCAGCTACTTGGAATGCTGAGGCACTAGAATTGCTTGAACCTTaGAGGCGGAGGTTGCAGTGGGTCAAGATCACGGCACTGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ISATWNAEALELLEP*RRRLQWVKITALPF Trigger: GAAGGGCAGTGCCGTGATCTTGACCCACTGCAACCTCCGCCTCCAAGGTTCAAGCAATTCTAGTGCCTCAGCATTCCAAGTAGCTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCTTGGAGGCGGAGGTTaGAGTGGGTCAAGATCACGG | + |
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Preference number: 2 (lower is better) Translates to: EERNIQTNQPGQHGESLPLGGGG*SGSRSR Trigger: CCGTGATCTTGACCCACTGCAACCTCCGCCTCCAAG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCGCTGCACTCTGGCCTaGTCAACAGAGCGAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: EERNIQTNQPGQHGESLPRCTLA*STERDC Trigger: ACAGTCTCGCTCTGTTGACCAGGCCAGAGTGCAGCG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCTTGAACCCAGGAGGTaGAGGGAGCAGTTAGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: EERNIQTNQPGQHGESLPLEPRR*REQLVG Trigger: CCCGACTAACTGCTCCCTCCACCTCCTGGGTTCAAG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCCAGCCTCACCAACATaGGGAAACCGCACCACAACT | + |
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Preference number: 2 (lower is better) Translates to: EERNIQTNQPGQHGESLPPASPT*GNRTTT Trigger: AGTTGTGGTGCGGTTTCCTCATGTTGGTGAGGCTGG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTTTTGGAAGGCCAAGGTaGACAAATCACGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EERNIQTNQPGQHGESLPFGRPR*TNHEAR Trigger: CCTGGCCTCGTGATTTGTTCACCTTGGCCTTCCAAA...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| 3UTR CCA 72 bp | TCTACCAAAAATACAAAAATTAGTTGGGCATGGTGGTaGAGGCTGAAGCAGGTTAATGGCTTGAACCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: STKNTKISWAWW*RLKQVNGLNQE Trigger: CTCCTGGTTCAAGCCATTAACCTGCTTCAGCCTCCACCACCATGCCCAACTAATTTTTGTATTTTTGGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418063.3 |
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| 3UTR CAA 72 bp | TTGCAGTGGGTCAAGATCACGGCACTGCCCTTCAGCTaGAGCGACAGAATGAGACTCCATCAGGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LQWVKITALPFS*SDRMRLHQVQG Trigger: CCCCTGCACCTGATGGAGTCTCATTCTGTCGCTCAAGCTGAAGGGCAGTGCCGTGATCTTGACCCACTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR TCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTGCACTCCAGCCTGGATaGGAAAGTGGACTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPALQPG*ESGLHL Trigger: CAGATGGAGTCCACTTTCTCATCCAGGCTGGAGTGC...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCAGGGCCACAGAGGCTaGAGAAGAAGACACGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPQGHRG*RRRHEA Trigger: TGCTTCGTGTCTTCTTCTCCAGCCTCTGTGGCCCTG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTTGCTGCACTCCAGCCTaGATGAGAAAGTGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPCCTPA*MRKWTP Trigger: TGGAGTCCACTTTCTCATCCAGGCTGGAGTGCAGCA...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTGCCTGGATGAGAAAGTaGACTCCATCTGGGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPAWMRK*TPSGDL Trigger: CAAATCCCCAGATGGAGTCCACTTTCTCATCCAGGC...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTGTAGTCCTTGCTACTTaGGAGACTGAGGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPVVLAT*ETEAGE Trigger: TTCTCCTGCCTCAGTCTCCCAAGTAGCAAGGACTAC...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CCA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTAAAGTGGACTCCATCTaGGGATTTGGCAATCATCTC | + |
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Preference number: 4 (lower is better) Translates to: EERNIQTNQPGQHGESLPKVDSI*GFGNHL Trigger: GAGATGATTGCCAAATCCCCAGATGGAGTCCACTTT...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CAA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTATGATCACACAGAGATaGCGCTGCTGCACTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: EERNIQTNQPGQHGESLPMITQR*RCCTPA Trigger: GGCTGGAGTGCAGCAGCGCAATCTCTGTGTGATCAT...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CAA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTCAGCTAAGACCAGATTaGGAGCACCAGCTGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: EERNIQTNQPGQHGESLPQLRPD*EHQLQQ Trigger: TTGCTGCAGCTGGTGCTCCAAATCTGGTCTTAGCTG...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CAA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTAGGCAGGAGAATCGCTaGAACTTGGGAGGTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: EERNIQTNQPGQHGESLPRQENR*NLGGEG Trigger: ACCTTCACCTCCCAAGTTCAAGCGATTCTCCTGCCT...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS-3UTR CAA 90 bp | GAAGAAAGAAATATACAAACTAATCAGCCTGGTCAACATGGTGAAAGCCTGCCTGAGAATCGCTTGAACTaGGGAGGTGAAGGTTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: EERNIQTNQPGQHGESLPENRLN*GGEGCN Trigger: ATTGCAACCTTCACCTCCCAAGTTCAAGCGATTCTC...AGGCAGGCTTTCACCATGTTGACCAGGCTGATTAGTTTGTATATTTCTTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469078.5 |
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| CDS GCA 72 bp | GTGAAGGTTGCAATGATCACACAGAGATTGCGCTGCTaGACTCCAGCCTGGATGAGAAAGTGGACTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: VKVAMITQRLRC*TPAWMRKWTPS Trigger: AGATGGAGTCCACTTTCTCATCCAGGCTGGAGTGCAGCAGCGCAATCTCTGTGTGATCATTGCAACCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469078.5 ENST00000484032.1 |
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| CDS GCA 72 bp | TTATGTGCTGCCCCTGGGCAGCAATTCTTGCTGACCTaGAATTCTTGCAGCCTCAACATGGAGAAACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LCAAPGQQFLLT*NSCSLNMEKLC Trigger: ACAGAGTTTCTCCATGTTGAGGCTGCAAGAATTGCAGGTCAGCAAGAATTGCTGCCCAGGGGCAGCACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492328.1 |
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| CDS CAA 72 bp | TGCCCCTGGGCAGCAATTCTTGCTGACCTGCAATTCTaGCAGCCTCAACATGGAGAAACTCTGTCTCTACTA | + |
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Preference number: 6 (lower is better) Translates to: CPWAAILADLQF*QPQHGETLSLL Trigger: TAGTAGAGACAGAGTTTCTCCATGTTGAGGCTGCAAGAATTGCAGGTCAGCAAGAATTGCTGCCCAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492328.1 |
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