Pregenerated sensors for ZNF888 (Homo sapiens)
Ensembl gene IDs: ENSG00000213793Ensembl transcript IDs: ENST00000596623.2, ENST00000638862.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGGTCGTGATTGATTTGAGCAAGCAGTGGGTATGTGACAGGGGCTaGATGCACCGGTGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: TVVIDLSKQWVCDRG*MHRCSEWKRTEQGV Trigger: AACTCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTGCATGCAGCCCCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR TCA 90 bp | TTAACTACTGGGTTTAGGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCCCACCACAAAAGAAGTaGAATTGGCTGGTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LTTGFRPGRPRPGFRPGAPPQKK*NWLVPA Trigger: GGCAGGGACCAGCCAATTTCACTTCTTTTGTGGTGG...GGCGCCAGGCCTGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR CAA 90 bp | GGGCTCACAACACTAAGGATTTCACATGAAACGGTCGTGATTGATTaGAGCAAGCAGTGGGTATGTGACAGGGGCTGCATGCACCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GLTTLRISHETVVID*SKQWVCDRGCMHRC Trigger: ACACCGGTGCATGCAGCCCCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAATCCTTAGTGTTGTGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR GCA 90 bp | AGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAATGTCTGGAATCTATGTGTGACCCCCACCTCTaGCAGCCAGAGAACAACCCC | + |
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Preference number: 2 (lower is better) Translates to: RTEQGVSQCSSIQCLESMCDPHL*QPENNP Trigger: GGGGTTGTTCTCTGGCTGGCAGAGGTGGGGGTCACA...CATAGATTCCAGACATTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR CCA 90 bp | ATTTCACATGAAACGGTCGTGATTGATTTGAGCAAGCAGTGGGTATGTGACAGGCACCGGTGTTCAGAGTaGAAAAGAACAGAGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ISHETVVIDLSKQWVCDRHRCSE*KRTEQG Trigger: TCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTG...CCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCTGAGCTCAAAATGCCTATCAGTTaGCATTCCACCACAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RALFSWEHRQATALKSELKMPIS*HSTTKE Trigger: TTCTTTTGTGGTGGAATGTCAACTGATAGGCATTTT...GAGCTCAGATTTTAAGGCAGTAGCTTGCCGATGCTCCCAGCTGAATAAAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR CAA 90 bp | TACCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAACTCCCCCACTGAGTGGCTCACGCCTGTaGGCCACACTAGTCTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: YLVKFLLLAHPGSKTPPLSGSRL*ATLVSN Trigger: GTTTGAGACTAGTGTGGCCAACAGGCGTGAGCCACT...CAGTGGGGGAGTTTTTGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAAGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR CCA 72 bp | TCACATGAAACGGTCGTGATTGATTTGAGCAAGCAGTaGGTATGTGACAGGGGCTGCATGCACCGGTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SHETVVIDLSKQ*VCDRGCMHRCS Trigger: TGAACACCGGTGCATGCAGCCCCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR GCA 72 bp | ATTGATTTGAGCAAGCAGTGGGTATGTGACAGGGGCTaGATGCACCGGTGTTCAGAGTGGAAAAGAACAGAG | + |
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Preference number: 3 (lower is better) Translates to: IDLSKQWVCDRG*MHRCSEWKRTE Trigger: CTCTGTTCTTTTCCACTCTGAACACCGGTGCATGCAGCCCCTGTCACATACCCACTGCTTGCTCAAATCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR CCA 72 bp | GTATGTGACAGGGGCTGCATGCACCGGTGTTCAGAGTaGAAAAGAACAGAGCAGGGAGTTTCACAATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: VCDRGCMHRCSE*KRTEQGVSQCS Trigger: AGAACATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTGCATGCAGCCCCTGTCACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTTCTCCTGGCTCATCCTGGCTCAAAAACTCCCCCACTGAGCACCTTGTGAGAGAACAACCCCCTTaGATTGTAACTTTCCACTAC | + |
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Preference number: 3 (lower is better) Translates to: IPSPGSSWLKNSPTEHLVREQPP*IVTFHY Trigger: GTAGTGGAAAGTTACAATCAAAGGGGGTTGTTCTCT...CACAAGGTGCTCAGTGGGGGAGTTTTTGAGCCAGGATGAGCCAGGAGAAGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR TCA 72 bp | TGGCTGGTCCCTGCCTTAACTGATGACATTACCTTGTaGAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: WLVPALTDDITL*NSFSWLILAQK Trigger: TTTTTGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAAGGTAATGTCATCAGTTAAGGCAGGGACCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR TCA 72 bp | AAATGCCTATCAGTTGACATTCCACCACAAAAGAAGTaGAATTGGCTGGTCCCTGCCTTAACTGATGACATT | + |
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Preference number: 3 (lower is better) Translates to: KCLSVDIPPQKK*NWLVPALTDDI Trigger: AATGTCATCAGTTAAGGCAGGGACCAGCCAATTTCACTTCTTTTGTGGTGGAATGTCAACTGATAGGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR TCA 72 bp | AGATTCAACACGGTACCCATAAAAATGCCTATCAGTTaGCATTCCACCACAAAAGAAGTGAAATTGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: RFNTVPIKMPIS*HSTTKEVKLAG Trigger: ACCAGCCAATTTCACTTCTTTTGTGGTGGAATGTCAACTGATAGGCATTTTTATGGGTACCGTGTTGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR-3UTR CAA 90 bp | TGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAAAAAAATGCCTATCAGTaGACATTCCACCACAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CSEWKRTEQGVSQCSSIQKNAYQ*TFHHKR Trigger: TCTTTTGTGGTGGAATGTCAACTGATAGGCATTTTT...TTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | TTAACTACTGGGTTTAGGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCAGACTCGCCGCAGTGTaGCTTCCAGTCCACGCGATC | + |
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Preference number: 4 (lower is better) Translates to: LTTGFRPGRPRPGFRPGARLAAV*LPVHAI Trigger: GATCGCGTGGACTGGAAGTCACACTGCGGCGAGTCT...GGCGCCAGGCCTGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGTTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | TACCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAACTCCCCCACTGCCACTGAGCACCTTGTaGCCCCCACCTCTGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: YLVKFLLLAHPGSKTPPLPLSTL*PPPLPA Trigger: GGCTGGCAGAGGTGGGGGTCACAAGGTGCTCAGTGG...CAGTGGGGGAGTTTTTGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | TTAACTACTGGGTTTAGGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCATGTTGTGCCAGGTGTaGGTAACACTTGAAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LTTGFRPGRPRPGFRPGAMLCQV*VTLESL Trigger: AAGGCTTTCAAGTGTTACTCACACCTGGCACAACAT...GGCGCCAGGCCTGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | TTAACTACTGGGTTTAGGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCGATGACATTACCTTGTaGAATTCCTTCTCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LTTGFRPGRPRPGFRPGADDITL*NSFSWL Trigger: GAGCCAGGAGAAGGAATTTCACAAGGTAATGTCATC...GGCGCCAGGCCTGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | CACCTTGTGACCCCCACCTCTGCCAGCCAGAGAACAACCCCCTTTGATTGTAACCCACCACAAAAGAAGTaGAATTGGCTGGTCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: HLVTPTSASQRTTPFDCNPPQKK*NWLVPA Trigger: GGCAGGGACCAGCCAATTTCACTTCTTTTGTGGTGG...GTTACAATCAAAGGGGGTTGTTCTCTGGCTGGCAGAGGTGGGGGTCACAAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR GCA 90 bp | AGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCTGAGCTCTGTGACCCCCACCTCTaGCAGCCAGAGAACAACCCC | + |
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Preference number: 4 (lower is better) Translates to: RALFSWEHRQATALKSELCDPHL*QPENNP Trigger: GGGGTTGTTCTCTGGCTGGCAGAGGTGGGGGTCACA...GAGCTCAGATTTTAAGGCAGTAGCTTGCCGATGCTCCCAGCTGAATAAAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | AGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCTGAGCTCGGCACAAGAATCACTTaGACCCAGGAGACAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RALFSWEHRQATALKSELGTRIT*TQETEV Trigger: AACCTCTGTCTCCTGGGTTCAAGTGATTCTTGTGCC...GAGCTCAGATTTTAAGGCAGTAGCTTGCCGATGCTCCCAGCTGAATAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | AGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCTGAGCTCAATGTCAATAGACCCTaGGGAAGAGCCATCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RALFSWEHRQATALKSELNVNRP*GRAIPD Trigger: GTCAGGGATGGCTCTTCCTCAGGGTCTATTGACATT...GAGCTCAGATTTTAAGGCAGTAGCTTGCCGATGCTCCCAGCTGAATAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | ATTCCTTCTCCTGGCTCATCCTGGCTCAAAAACTCCCCCACTGAGCACCTTGTGGGTGTGAGTAACACTTaGAAGCCTTGTCACAAACCT | + |
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Preference number: 4 (lower is better) Translates to: IPSPGSSWLKNSPTEHLVGVSNT*KPCHKP Trigger: AGGTTTGTGACAAGGCTTTCAAGTGTTACTCACACC...CACAAGGTGCTCAGTGGGGGAGTTTTTGAGCCAGGATGAGCCAGGAGAAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| 3UTR CAA 72 bp | ACACTAAGGATTTCACATGAAACGGTCGTGATTGATTaGAGCAAGCAGTGGGTATGTGACAGGGGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: TLRISHETVVID*SKQWVCDRGCM Trigger: CATGCAGCCCCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAATCCTTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CCA 90 bp | CTAAGGATTTCACATGAAACGGTCGTGATTGATTTGAGCAAGCAGTGGGTATGTCACCGGTGTTCAGAGTaGAAAAGAACAGAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LRISHETVVIDLSKQWVCHRCSE*KRTEQG Trigger: TCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTG...ACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAATCCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | CTGCATGCACCGGTGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGAAAATGCCTATCAGTTaGCATTCCACCACAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LHAPVFRVEKNRAGSFTMKMPIS*HSTTKE Trigger: TTCTTTTGTGGTGGAATGTCAACTGATAGGCATTTT...CATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTGCATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CCA 90 bp | TGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAATCTCCTGGCTCATCCTaGCTCAAAAACTCCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: CSEWKRTEQGVSQCSSIQSPGSS*LKNSPT Trigger: AGTGGGGGAGTTTTTGAGCCAGGATGAGCCAGGAGA...TTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | AGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAATGTCTGGAATCTATGTACTGCCTTAAAATCTaGGCTCCCCTAATGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: RTEQGVSQCSSIQCLESMYCLKI*APLMHN Trigger: ATTGTGCATTAGGGGAGCTCAGATTTTAAGGCAGTA...CATAGATTCCAGACATTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR TCA 90 bp | TGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAACAATATAAAACAATATaGGAGGGTCTCTCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: CSEWKRTEQGVSQCSSIQQYKTI*EGLSLP Trigger: GGGAAGAGAGAGACCCTCTCATATTGTTTTATATTG...TTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CAA 90 bp | TTAACTACTGGGTTTAGGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCAGTGGCTCACGCCTGTaGGCCACACTAGTCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LTTGFRPGRPRPGFRPGASGSRL*ATLVSN Trigger: GTTTGAGACTAGTGTGGCCAACAGGCGTGAGCCACT...GGCGCCAGGCCTGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGTTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS GCA 90 bp | CTCAGGTCACTGCAACCTCCGCCTCCCGATTTCAAGTCATTCTTCTaGCTCAGTCTCCTGAGTAGCAGGGATTGCAGGCACACACCACCA | + |
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Preference number: 5 (lower is better) Translates to: LRSLQPPPPDFKSFF*LSLLSSRDCRHTPP Trigger: TGGTGGTGTGTGCCTGCAATCCCTGCTACTCAGGAGACTGAGGCAGAAGAATGACTTGAAATCGGGAGGCGGAGGTTGCAGTGACCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596623.2 |
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| CDS-3UTR CAA 90 bp | CTGCATGCACCGGTGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGAGAGAACAACCCCCTTaGATTGTAACTTTCCACTAC | + |
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Preference number: 5 (lower is better) Translates to: LHAPVFRVEKNRAGSFTMREQPP*IVTFHY Trigger: GTAGTGGAAAGTTACAATCAAAGGGGGTTGTTCTCT...CATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACACCGGTGCATGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CAA 90 bp | ATTTCACATGAAACGGTCGTGATTGATTTGAGCAAGCAGTGGGTATGTGACAGGACGGTCGTGATTGATTaGAGCAAGCAGTGGGTATGT | + |
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Preference number: 5 (lower is better) Translates to: ISHETVVIDLSKQWVCDRTVVID*SKQWVC Trigger: ACATACCCACTGCTTGCTCAAATCAATCACGACCGT...CCTGTCACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CAA 90 bp | TGTTCAGAGTGGAAAAGAACAGAGCAGGGAGTTTCACAATGTTCTTCTATACAACAGCTACTTGGGAGGTaGAGGCACAAGAATCACTTG | + |
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Preference number: 5 (lower is better) Translates to: CSEWKRTEQGVSQCSSIQQLLGR*RHKNHL Trigger: CAAGTGATTCTTGTGCCTCAACCTCCCAAGTAGCTG...TTGTATAGAAGAACATTGTGAAACTCCCTGCTCTGTTCTTTTCCACTCTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS-3UTR CAA 90 bp | CTAAGGATTTCACATGAAACGGTCGTGATTGATTTGAGCAAGCAGTGGGTATGTACAAAAGAAGTGAAATaGGCTGGTCCCTGCCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: LRISHETVVIDLSKQWVCTKEVK*AGPCLN Trigger: GTTAAGGCAGGGACCAGCCAATTTCACTTCTTTTGT...ACATACCCACTGCTTGCTCAAATCAATCACGACCGTTTCATGTGAAATCCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638862.1 |
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| CDS GCA 72 bp | CTGCAACCTCCGCCTCCCGATTTCAAGTCATTCTTCTaGCTCAGTCTCCTGAGTAGCAGGGATTGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LQPPPPDFKSFF*LSLLSSRDCRH Trigger: GTGCCTGCAATCCCTGCTACTCAGGAGACTGAGGCAGAAGAATGACTTGAAATCGGGAGGCGGAGGTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596623.2 |
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