RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF875 (Homo sapiens)

Ensembl gene IDs: ENSG00000181666

Ensembl transcript IDs: ENST00000324411.8, ENST00000392153.7, ENST00000541583.6, ENST00000544914.5, ENST00000586897.1, ENST00000587570.1, ENST00000589218.5, ENST00000589392.5, ENST00000589801.1, ENST00000590386.5, ENST00000590570.1, ENST00000590582.1, ENST00000591134.5, ENST00000591391.5, ENST00000591471.5, ENST00000591485.5, ENST00000592168.5, ENST00000592362.5, ENST00000652615.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACCAGGTACCCACCCCTATCTGCCTGGGCATTTGACTGCCTCCTaGCACTATCATTACCTGACCGGGTTTCCACAACCCACCATCCAC +
Preference number: 1 (lower is better)
Translates to: SPGTHPYLPGHLTAS*HYHYLTGFPQPTIH
Trigger: GTGGATGGTGGGTTGTGGAAACCCGGTCAGGTAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATAGGGGTGGGTACCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CCA 90 bp TCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTTGTCTTCCTTaGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTGGAAAGTGCCT +
Preference number: 1 (lower is better)
Translates to: SVQGWTLYPPLCCLP*TVLAVVLQVGWKVP
Trigger: AGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR GCA 90 bp AGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTaGTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCTCAC +
Preference number: 1 (lower is better)
Translates to: RILPPALQSSMYWQC*FMWLQGSCSSSGPH
Trigger: GTGAGGACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR CCA 90 bp CCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGCTTTATGTaGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCTCACACAATGTCT +
Preference number: 1 (lower is better)
Translates to: PPALQSSMYWQCCFM*LQGSCSSSGPHTMS
Trigger: AGACATTGTGTGAGGACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR GCA 90 bp GTGCTGGCTGTTGTTCTTCAGGTGGGCTGGAAAGTGCCTTTGAAGTaGCATTTTTGCTTACTCTCCCAAACAGGAGTCTGGAGTCTTCTC +
Preference number: 1 (lower is better)
Translates to: VLAVVLQVGWKVPLK*HFCLLSQTGVWSLL
Trigger: GAGAAGACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR GCA 90 bp GTTGTTCTTCAGGTGGGCTGGAAAGTGCCTTTGAAGTGCCATTTTTaGTTACTCTCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAA +
Preference number: 1 (lower is better)
Translates to: VVLQVGWKVPLKCHF*LLSQTGVWSLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CCA 90 bp ATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTaGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: IVARILPPALQSSMY*QCCFMWLQGSCSSS
Trigger: TGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR CCA 90 bp TGTTGTCTTCCTTGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGCCATTTTTGCTTACTCTCCCAAACA +
Preference number: 1 (lower is better)
Translates to: CCLPWTVLAVVLQVG*KVPLKCHFCLLSQT
Trigger: TGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR GCA 90 bp TCTCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTaGTTTGCCACTAAAGCAGAATGGATCCTGCTGTTGTTTCTGATC +
Preference number: 1 (lower is better)
Translates to: SPKQESGVFSLLNPF*FATKAEWILLLFLI
Trigger: GATCAGAAACAACAGCAGGATCCATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CCA 90 bp ACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTaGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCC +
Preference number: 1 (lower is better)
Translates to: TSTVSCIITHRMSPL*YLAMAEKATALCVS
Trigger: GGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR GCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCCTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 2 (lower is better)
Translates to: PPSTVRKGRAPENEPAILLTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 90 bp CTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTTGTCTTCCTaGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTGGAAAGTGCC +
Preference number: 2 (lower is better)
Translates to: LRSGLDPISTTVLSS*DCAGCCSSGGLESA
Trigger: GGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 90 bp AGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RSALRSGLDPISTTV*SSLDCAGCCSSGGL
Trigger: CAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 2 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCAAGAACAGCTCTCAGTaGAGAGGGGATGCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: PPSTVRKGRAPENEPAILKNSSQ*RGDAGS
Trigger: ACTCCCTGCATCCCCTCTCCACTGAGAGCTGTTCTT...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
3UTR-3UTR CCA 90 bp CCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTTGTGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 2 (lower is better)
Translates to: PLDLPSVQGWTLYPPLCCVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...ACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: PPSTVRKGRAPENEPAILVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 2 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp TGCCCTCTTGTGCCTAAACAGGTTAGGCTTCTGCCGAAACCTTCTGCCACACTCGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: CPLVPKQVRLLPKPSATLAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...GAGTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 90 bp TGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTACTCTCCCAAACAGGAGTCTGGAGT +
Preference number: 2 (lower is better)
Translates to: WTVLAVVLQVGWKVP*KCHFCLLSQTGVWS
Trigger: ACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 2 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CAA 90 bp AAACAGCTGAGAGAGATGACTCAGCCACACATGTTGGCTGAGAGCTaGCTGACTGGAGAAAATCAGAGGGCAGGAGGGACTAAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: KQLREMTQPHMLAES*LTGENQRAGGTKLN
Trigger: ATTCAACTTAGTCCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 2 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 2 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR GCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 2 (lower is better)
Translates to: NPPSTVRKGRAPENEPAITSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CCA 90 bp GGGCTGGAAAGTGCCTTTGAAGTGCCATTTTTGCTTACTCTCCCAAACAGGAGTTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 2 (lower is better)
Translates to: GLESAFEVPFLLTLPNRSSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...ACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 2 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCACTGTGTTGTCTTCCTTaGACTGTGCTGGCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSLCCLP*TVLAVV
Trigger: AACAACAGCCAGCACAGTCCAAGGAAGACAACACAG...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 90 bp ATTTTTGCTTACTCTCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCCACTAAAGCAGAATGGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: IFAYSPKQESGVFSL*NPFCFATKAEWILL
Trigger: CAGCAGGATCCATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 2 (lower is better)
Translates to: PLWYLAMAEKATALCVSSMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 2 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 2 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 2 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 2 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTACTAAGTTGAATTTCTaGCTTCGATTCTGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: PLWYLAMAEKATALCVSSTKLNF*LRFCSP
Trigger: GGGACTACAGAATCGAAGCCAGAAATTCAACTTAGT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 90 bp TTGAATCCATTCTGCTTTGCCACTAAAGCAGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATAGTGTTTTCCCAGGTGGAGAGGATT +
Preference number: 2 (lower is better)
Translates to: LNPFCFATKAEWILL*FLIFWIVFSQVERI
Trigger: AATCCTCTCCACCTGGGAAAACACTATCCAGAAGATCAGAAACAACAGCAGGATCCATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR GCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCACAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 2 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR GCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 2 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 2 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR GCA 72 bp ACCCACCCCTATCTGCCTGGGCATTTGACTGCCTCCTaGCACTATCATTACCTGACCGGGTTTCCACAACCC +
Preference number: 3 (lower is better)
Translates to: THPYLPGHLTAS*HYHYLTGFPQP
Trigger: GGGTTGTGGAAACCCGGTCAGGTAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATAGGGGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR GCA 72 bp ACCAGGTACCCACCCCTATCTGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTACCTGACCGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: TRYPPLSAWAFD*LLPLSLPDRVS
Trigger: GGAAACCCGGTCAGGTAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATAGGGGTGGGTACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR GCA 72 bp CCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTaGTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: PPALQSSMYWQC*FMWLQGSCSSS
Trigger: TGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR CCA 72 bp CTGCAGTCCTCAATGTATTGGCAGTGTTGCTTTATGTaGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: LQSSMYWQCCFM*LQGSCSSSGPH
Trigger: GTGAGGACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR-3UTR CAA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 3 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CCA 72 bp CCTTGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGCCATTTTTGCTTACTC +
Preference number: 3 (lower is better)
Translates to: PWTVLAVVLQVG*KVPLKCHFCLL
Trigger: GAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CAA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCTATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 3 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CAA 90 bp TCTGTTTCCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 3 (lower is better)
Translates to: SVSSRSALRSGLDPISTTEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...AGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGGAAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CCA 72 bp AGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTaGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGC +
Preference number: 3 (lower is better)
Translates to: RILPPALQSSMY*QCCFMWLQGSC
Trigger: GCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
3UTR-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAATATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 3 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 3 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR-3UTR CAA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 3 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAATCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 3 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CCA 72 bp AAGTGCCATTTTTGCTTACTCTCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGC +
Preference number: 3 (lower is better)
Translates to: KCHFCLLSQTGV*SLLPLESILLC
Trigger: GCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CCA 72 bp GTCTCATGCATAATCACACACAGAATGTCTCCACTTTaGTATCTAGCAATGGCTGAAAAAGCCACAGCACTG +
Preference number: 3 (lower is better)
Translates to: VSCIITHRMSPL*YLAMAEKATAL
Trigger: CAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CCA 72 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAACCAATTAGGAAAGGGC +
Preference number: 3 (lower is better)
Translates to: LICKYAKAPLKR*AQQCKNQLGKG
Trigger: GCCCTTTCCTAATTGGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACTTTGAAGTGCCATTTTaGCTTACTCTCCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNFEVPF*LTLPNR
Trigger: CCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAA...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCTCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGTGCGTGCTCAGGGTTaGTTTCCGGGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILVRAQG*FPGKAS
Trigger: CGAGGCTTTACCCGGAAATCAACCCTGAGCACGCAC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAGGGGCACACAAAGGCACCTaGGTGTGCCCTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PHMLAESLLTGENQRAGGAHKGT*VCPLVP
Trigger: AGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGC...CCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCCCGGAAGGCAGAGCTTaGAGTGAGCAGAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILPEGRA*SEQRSP
Trigger: TGGCGATCTCTGCTCACTGCAAGCTCTGCCTTCCGG...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGACTCCAGGGGCTGAGGTaGGAGAATGGTGTGAACCCG +
Preference number: 4 (lower is better)
Translates to: QPHMLAESLLTGENQRAGLQGLR*ENGVNP
Trigger: CGGGTTCACACCATTCTCCCACCTCAGCCCCTGGAG...TCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 72 bp GTTTCACCAGGTACCCACCCCTATCTGCCTGGGCATTaGACTGCCTCCTGCCACTATCATTACCTGACCGGG +
Preference number: 4 (lower is better)
Translates to: VSPGTHPYLPGH*TASCHYHYLTG
Trigger: CCCGGTCAGGTAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATAGGGGTGGGTACCTGGTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGTGTCCTCTTGTGTCTaGCCAGGTGTGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILVSSCV*PGVNAG
Trigger: GCCAGCATTCACACCTGGTCAGACACAAGAGGACAC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAGTGCGTGCTCAGGGTTaGTTTCCGGGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QPHMLAESLLTGENQRAGVRAQG*FPGKAS
Trigger: CGAGGCTTTACCCGGAAATCAACCCTGAGCACGCAC...TCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGCACACAAAGGCACCTaGGTGTGCCCTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIAHKGT*VCPLVP
Trigger: AGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAITPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QPHMLAESLLTGENQRAGTPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...TCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAILTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTAGCCACATCCCTGAATaGCACGAACGCCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAISHIPE*HERLRV
Trigger: CACCCGAAGGCGTTCGTGGCATTCAGGGATGTGGCT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCACCAGGTGTGAATGCTaGCGAAAGCCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILTRCEC*RKPRPH
Trigger: ATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGT...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
3UTR CAA 72 bp GGGCTGGACCCTATATCCACCACTGTGTTGTCTTCCTaGGACTGTGCTGGCTGTTGTTCTTCAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLDPISTTVLSS*DCAGCCSSGGL
Trigger: CAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCATAAGGCTTGAGCCCTaGGTGTGTCCGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILIRLEP*VCPLMC
Trigger: ACACATCAGCGGACACACTCAGGGCTCAAGCCTTAT...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGTGTCCTCTTGTGTCTaGCCAGGTGTGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIVSSCV*PGVNAG
Trigger: GCCAGCATTCACACCTGGTCAGACACAAGAGGACAC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATACAGATGGAACGCGGGTaGACGCTGCGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIQMERG*TLRILK
Trigger: CTTCAGGATCCGCAGCGTGCACCCGCGTTCCATCTG...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000392153.7
CDS-3UTR GCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCTCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACTCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: SQTGVWSLLPLESILLCHSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...GTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp TGCCCTCTTGTGCCTAAACAGGTTAGGCTTCTGCCGAAACCTTCTGCCACACTCACCAGGTGTGAATGCTaGCGAAAGCCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: CPLVPKQVRLLPKPSATLTRCEC*RKPRPH
Trigger: ATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGT...GAGTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCTTCCAAATCTGGACCTaGTTCTGGCTGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILFQIWT*FWLERL
Trigger: GAGCCTCTCCAGCCAGAACCAGGTCCAGATTTGGAA...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591471.5
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTCTGTGCAGGGTCCTCTaGGCAGGGCTCAACAACCTC +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSLCRVL*AGLNNL
Trigger: GAGGTTGTTGAGCCCTGCTCAGAGGACCCTGCACAG...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ACTCAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TQPHMLAESLLTGENQRAATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...TGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586897.1
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTATAAGGCTTGAGCCCTaGGTGTGTCCGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIIRLEP*VCPLMC
Trigger: ACACATCAGCGGACACACTCAGGGCTCAAGCCTTAT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGITPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVTPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAAGGCAGAGCTTGCAGTaGGCAGAGATCGCCATACTA +
Preference number: 4 (lower is better)
Translates to: QPHMLAESLLTGENQRAGRQSLQ*AEIAIL
Trigger: TAGTATGGCGATCTCTGCTCACTGCAAGCTCTGCCT...TCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAGGGGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: PHMLAESLLTGENQRAGGAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...CCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCTCACACAATGATGCTGCCACGTGCCTaGTCAGGCCTAAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CCFMWLQGSCSSSGPHTMMLPRA*SGLRRE
Trigger: TTCCCTCCTTAGGCCTGAGCAGGCACGTGGCAGCAT...CATTGTGTGAGGACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp TGTATTGGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCCAAATGCTGCCACGTaGCTGCTCAGGCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CIGSVALCGCKVAAAAQVPNAAT*LLRPKE
Trigger: CTCCTTAGGCCTGAGCAGGCACGTGGCAGCATTTGG...GACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCTCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVSSTKC*HVPAQA
Trigger: GGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGA...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR GCA 90 bp TTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTTCACTCGGACGCCATCTaGAGACCCAGCCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FLPINLKTAERDDSATHVHSDAI*RPSLCR
Trigger: CCGGCACAGGCTGGGTCTGCAGATGGCGTCCGAGTG...AACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAGGGTTCCTTGGACTGTGCTaGCTGTTGTTCTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PHMLAESLLTGENQRAGGFLGLC*LLFFRW
Trigger: CCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA...CCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATACCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGCTGAGGTGGGAGAATaGTGTGAACCCGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVAEVGE*CEPGRQ
Trigger: CTGCCTTCCGGGTTCACACCATTCTCCCACCTCAGC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACGCTGAGGTGGGAGAATaGTGTGAACCCGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQTGVWSLLPLESILLCHAEVGE*CEPGRQ
Trigger: CTGCCTTCCGGGTTCACACCATTCTCCCACCTCAGC...GTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
3UTR CAA 72 bp CTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCTGGCTGTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRSGLDPISTTV*SSLDCAGCCSS
Trigger: TGAAGAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGAGGCTAAGGAGGTTTaGCTCCTTGATAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIEAKEV*LLDKAW
Trigger: CCAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGTGTCCTCTTGTGTCTaGCCAGGTGTGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIVSSCV*PGVNAG
Trigger: GCCAGCATTCACACCTGGTCAGACACAAGAGGACAC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGTGTCCTCTTGTGTCTaGCCAGGTGTGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVVSSCV*PGVNAG
Trigger: GCCAGCATTCACACCTGGTCAGACACAAGAGGACAC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGATTTCCAGCTAAAGTaGCGCCCACATTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILDFQLK*RPHSVH
Trigger: ATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGCAGATGGAACGCGGGTaGACGCTGCGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGQMERG*TLRILK
Trigger: CTTCAGGATCCGCAGCGTGCACCCGCGTTCCATCTG...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000392153.7
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQLTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCATCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCAAATGCTGCCACGTaGCTGCTCAGGCCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPNAAT*LLRPKE
Trigger: CTCCTTAGGCCTGAGCAGGCACGTGGCAGCATTTGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR GCA 90 bp CAGGTGACCAATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QVTNCSKNPSSCSAVLNVSSTKC*HVPAQA
Trigger: GGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGA...TACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAATTGGTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGTCTCAGAAGACAGATaGAACGCGGGTGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQVSEDR*NAGARC
Trigger: GCAGCGTGCACCCGCGTTCCATCTGTCTTCTGAGAC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000392153.7
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTCCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGTGTCCTCTTGTGTCTaGCCAGGTGTGAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQVSSCV*PGVNAG
Trigger: GCCAGCATTCACACCTGGTCAGACACAAGAGGACAC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGATTTCCAGCTAAAGTaGCGCCCACATTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIDFQLK*RPHSVH
Trigger: ATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCTGTTTCCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGATTTCCAGCTAAAGTaGCGCCCACATTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SVSSRSALRSGLDPISTTDFQLK*RPHSVH
Trigger: ATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATC...AGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTGCGTGCTCAGGGTTaGTTTCCGGGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSVRAQG*FPGKAS
Trigger: CGAGGCTTTACCCGGAAATCAACCCTGAGCACGCAC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGCACACAAAGGCACCTaGGTGTGCCCTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGAHKGT*VCPLVP
Trigger: AGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGCACACAAAGGCACCTaGGTGTGCCCTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSAHKGT*VCPLVP
Trigger: AGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 4 (lower is better)
Translates to: GEDFLPINLKTAERDDSAICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...GGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVTPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACACAGCCACATCCCTaGATGCCACGAACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGTQPHP*MPRTPG
Trigger: ACCTGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591471.5
CDS-3UTR TCA 90 bp TCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACAGGCAGAGAACTGCTTaGAACCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQTGVWSLLPLESILLCHRQRTA*NQEVEV
Trigger: AACCTCCACCTCCTGGTTTCAAGCAGTTCTCTGCCT...GTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGCTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGLTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCACTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSLTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp ACTCAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAAACAGGTTAGGCTTCTaGCGAAACCTTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: TQPHMLAESLLTGENQRANRLGF*RNLLPH
Trigger: GTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTT...TGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAATCAGTGGAGAGGGGATaGAGGGAGTGGTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKSVERG*REWSPT
Trigger: GGTTGGGGACCACTCCCTGCATCCCCTCTCCACTGA...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGATGCTGCCACGTGCCTaGTCAGGCCTAAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGMLPRA*SGLRRE
Trigger: TTCCCTCCTTAGGCCTGAGCAGGCACGTGGCAGCAT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPSSTK*CHVPAQ
Trigger: CTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGTCTCAGAAGACAGATaGAACGCGGGTGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVVSEDR*NAGARC
Trigger: GCAGCGTGCACCCGCGTTCCATCTGTCTTCTGAGAC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000392153.7
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTTCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAISQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGCCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCCAGTTTGTGTCTTCTaGAGGCTAAGGAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIPVCVF*RLRRFD
Trigger: GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGG...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCTGTTTCCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTCCAGTTTGTGTCTTCTaGAGGCTAAGGAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SVSSRSALRSGLDPISTTPVCVF*RLRRFD
Trigger: GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGG...AGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAACCAGGTGTGAATGCTaGCGAAAGCCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQTRCEC*RKPRPH
Trigger: ATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTTGTTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: PLDLPSVQGWTLYPPLCCSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...ACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCAAGAACAGCTCTCAGTaGAGAGGGGATGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVKNSSQ*RGDAGS
Trigger: ACTCCCTGCATCCCCTCTCCACTGAGAGCTGTTCTT...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAAAGAACAGCTCTCAGTaGAGAGGGGATGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIKNSSQ*RGDAGS
Trigger: ACTCCCTGCATCCCCTCTCCACTGAGAGCTGTTCTT...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCCCTAAGGAGGGAAAGTaGGTGGTGATGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVPKEGK*VVMKSV
Trigger: CACGCTCTTCATCACCACCCACTTTCCCTCCTTAGG...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTGTGCAGGGTCCTCTaGGCAGGGCTCAACAACCTC +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNLCRVL*AGLNNL
Trigger: GAGGTTGTTGAGCCCTGCTCAGAGGACCCTGCACAG...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTATAAGGCTTGAGCCCTaGGTGTGTCCGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSIRLEP*VCPLMC
Trigger: ACACATCAGCGGACACACTCAGGGCTCAAGCCTTAT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: DFLPINLKTAERDDSATHVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...ATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGTGCGTGCTCAGGGTTaGTTTCCGGGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTVRAQG*FPGKAS
Trigger: CGAGGCTTTACCCGGAAATCAACCCTGAGCACGCAC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGTGCGTGCTCAGGGTTaGTTTCCGGGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKVRAQG*FPGKAS
Trigger: CGAGGCTTTACCCGGAAATCAACCCTGAGCACGCAC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCACCCCCACAGCAGGGTaGTTTCTCTCCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTTPTAG*FLSSLQ
Trigger: CTGCAGTGAGGAGAGAAATCACCCTGCTGTGGGGGT...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAACACAGCCACATCCCTaGATGCCACGAACGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSTQPHP*MPRTPL
Trigger: AAGAGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392153.7
CDS-3UTR TCA 90 bp TCCTCAATGTATTGGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCACACAGCCACATCCCTaGATGCCACGAACGCCAATA +
Preference number: 4 (lower is better)
Translates to: SSMYWQCCFMWLQGSCSSTQPHP*MPRTPI
Trigger: TATTGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...GCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR TCA 90 bp TTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTTGGCAGGGGAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLPINLKTAERDDSATHVGRGIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCCCCTGCC...AACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp GATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATACACAGCCACATCCCTaGATGCCACGAACGCCTTCG +
Preference number: 4 (lower is better)
Translates to: DFLPINLKTAERDDSATHTQPHP*MPRTPS
Trigger: CGAAGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...ATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp GATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATCTGACCAGGTGTGAATaGTGGCGAAAGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: DFLPINLKTAERDDSATHLTRCE*WRKPRP
Trigger: TGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAG...ATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp ACCAATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCACCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TNCSKNPSSCSAVLNVLAPSSTK*CHVPAQ
Trigger: CTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGG...TGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTAGCCACATCCCTGAATaGCACGAACGCCAATATATA +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAISHIPE*HERQYI
Trigger: TATATATTGGCGTTCGTGGCATTCAGGGATGTGGCT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR GCA 90 bp TTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTTCCGGAAGGCAGAGCTTaGAGTGAGCAGAGATCGCCA +
Preference number: 4 (lower is better)
Translates to: FLPINLKTAERDDSATHVPEGRA*SEQRSP
Trigger: TGGCGATCTCTGCTCACTGCAAGCTCTGCCTTCCGG...AACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp TGTATTGGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGGTCTCCTTCCTCCTGCTCTaGAGTCCTCAATGTATTGGC +
Preference number: 4 (lower is better)
Translates to: CIGSVALCGCKVAAAAQVSFLLL*SPQCIG
Trigger: GCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGA...GACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACACAGGCGGAACGCGGGTaGACGCTGCGGATCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTQAERG*TLRILK
Trigger: CTTCAGGATCCGCAGCGTGCACCCGCGTTCCGCCTG...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACAATGCTGCCACGTGCCTaGTCAGGCGGAACGCGGGTG +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTMLPRA*SGGTRV
Trigger: CACCCGCGTTCCGCCTGAGCAGGCACGTGGCAGCAT...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACCAGGTGTGAATGCTaGCGAAAGCCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGTRCEC*RKPRPH
Trigger: ATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCACCAGGTGTGAATGCTaGCGAAAGCCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVTRCEC*RKPRPH
Trigger: ATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGACCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: QPHMLAESLLTGENQRAGPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...TCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAISPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACACTGTATTCCAGCCTaGCAACAGAGCAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQHCIPA*QQSKAP
Trigger: TGGAGCCTTGCTCTGTTGCCAGGCTGGAATACAGTG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGACTTGTTCCAAATCTaGACCTGGTTCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVDLFQI*TWFWLE
Trigger: CTCCAGCCAGAACCAGGTCCAGATTTGGAACAAGTC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591471.5
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAACACAGCCACATCCCTaGATGCCACGAACGCCGTTA +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKTQPHP*MPRTPL
Trigger: TAACGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR TCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILRWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGAGGCTAAGGAGGTTTaGCTCCTTGATAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQEAKEV*LLDKAW
Trigger: CCAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACTGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PKQESGVFSLLNPFCFATVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...AGTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTCCCAGGTGGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATAGGCAGAGAACTGCTTaGAACCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FPGGEDFLPINLKTAERDRQRTA*NQEVEV
Trigger: AACCTCCACCTCCTGGTTTCAAGCAGTTCTCTGCCT...ATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586897.1
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACAGCCACATCCCTGAATaGCACGAACGCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNSHIPE*HERQVW
Trigger: CCACACCTGGCGTTCGTGGCATTCAGGGATGTGGCT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591471.5
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACACCAAATGCTGCCACGTaGCTGCTCAGGCGGAACGCG +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTPNAAT*LLRRNA
Trigger: CGCGTTCCGCCTGAGCAGGCACGTGGCAGCATTTGG...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATATCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGISQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp GGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GEDFLPINLKTAERDDSAVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...GGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCCTTGGACTGTGCTaGCTGTTGTTCTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQFLGLC*LLFFRW
Trigger: CCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATACTGTGTTGTCTTCCTTaGACTGTGCTGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGILCCLP*TVLAVV
Trigger: AACAACAGCCAGCACAGTCCAAGGAAGACAACACAG...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCCTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: PPSTVRKGRAPENEPAILLLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAAAGAACAGCTCTCAGTaGAGAGGGGATGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSKNSSQ*RGDAGS
Trigger: ACTCCCTGCATCCCCTCTCCACTGAGAGCTGTTCTT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
CDS-3UTR CCA 90 bp AATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGCTTTATGTGCCTAAGGAGGGAAAGTaGGTGGTGATGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: NPSSCSAVLNVLAVLLYVPKEGK*VVMKSV
Trigger: CACGCTCTTCATCACCACCCACTTTCCCTCCTTAGG...CACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAACTCCAGGGGCTGAGGTaGGAGAATGGTGTGAACCCG +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAELQGLR*ENGVNP
Trigger: CGGGTTCACACCATTCTCCCACCTCAGCCCCTGGAG...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGGTCCTCACAAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: GSVALCGCKVAAAAQVLTRWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...TGTGAGGACCTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGAGGCTAAGGAGGTTTaGCTCCTTGATAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGEAKEV*LLDKAW
Trigger: CCAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACAGAGGCTAAGGAGGTTTaGCTCCTTGATAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EDFLPINLKTAERDDSATEAKEV*LLDKAW
Trigger: CCAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTC...TGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAGTGTCTGACCAGGTGTaGATGCTGGCGAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEVSDQV*MLAKAT
Trigger: CGTGGCTTTCGCCAGCATTCACACCTGGTCAGACAC...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGATTTCCAGCTAAAGTaGCGCCCACATTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQDFQLK*RPHSVH
Trigger: ATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGCACACAAAGGCACCTaGGTGTGCCCTCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYAHKGT*VCPLVP
Trigger: AGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAACACAGCCACATCCCTaGATGCCACGAACGCCAATA +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKTQPHP*MPRTPI
Trigger: TATTGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAGGCAGAGAACTGCTTaGAACCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKRQRTA*NQEVEV
Trigger: AACCTCCACCTCCTGGTTTCAAGCAGTTCTCTGCCT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAGCCACATCCCTGAATaGCACGAACGCCGTTATTCC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKSHIPE*HERRYS
Trigger: GGAATAACGGCGTTCGTGGCATTCAGGGATGTGGCT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR GCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp GGGCTGGAAAGTGCCTTTGAAGTGCCATTTTTGCTTACTCTCCCAAACAGGAGTTCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLESAFEVPFLLTLPNRSSQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...ACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGTTCCTTGGACTGTGCTaGCTGTTGTTCTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGFLGLC*LLFFRW
Trigger: CCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACTGTGTTGTCTTCCTTaGACTGTGCTGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQLCCLP*TVLAVV
Trigger: AACAACAGCCAGCACAGTCCAAGGAAGACAACACAG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCCCTCCGTTCAGGGCTaGACCCTATATCCACCACTG +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYPSVQG*TLYPPL
Trigger: CAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTCCAGTTTGTGTCTTCTaGAGGCTAAGGAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSPVCVF*RLRRFD
Trigger: GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGG...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCAGTTTGTGTCTTCTaGAGGCTAAGGAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPVCVF*RLRRFD
Trigger: GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATACCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCAAGAACAGCTCTCAGTaGAGAGGGGATGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTKNSSQ*RGDAGS
Trigger: ACTCCCTGCATCCCCTCTCCACTGAGAGCTGTTCTT...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
CDS-3UTR CCA 90 bp ACTCAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGACTTGTTCCAAATCTaGACCTTCCAATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: TQPHMLAESLLTGENQRADLFQI*TFQCIQ
Trigger: TTGGATGCATTGGAAGGTCCAGATTTGGAACAAGTC...TGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CCAATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGCAGTGTTGCTTTATGTaGTTGCAAGGTAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PIVARILPPALQSSMYWQQCCFM*LQGSCS
Trigger: GCTGCAGCTACCTTGCAACCACATAAAGCAACACTG...CTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCAAATCTCTCCCACTaGGTAGAAACACAGCTAGAA +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPNLSH*VETQLE
Trigger: TTCTAGCTGTGTTTCTACTCAGTGGGAGAGATTTGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR TCA 90 bp ACTCAGCCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: TQPHMLAESLLTGENQRARWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...TGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586897.1
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGCCACACATGTTGGCTaGGAGCTTGCTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYATHVG*ELADWR
Trigger: TCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACATAAGGCTTGAGCCCTaGGTGTGTCCGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNIRLEP*VCPLMC
Trigger: ACACATCAGCGGACACACTCAGGGCTCAAGCCTTAT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGATTTCCAGCTAAAGTaGCGCCCACATTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSDFQLK*RPHSVH
Trigger: ATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGTGTGTTTTGAGGTTTaGTTTCCAGCTAAAGTGACG +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIVCFEV*FPAKVT
Trigger: CGTCACTTTAGCTGGAAATCAAACCTCAAAACACAC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATATCTGCCTGGGCATTTaGCTGCCTCCTGCCACTATC +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYICLGI*LPPATI
Trigger: GATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGAT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTGTAACCTCAGGCACTaGATTAGCTGCTCAGCACGT +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTCNLRH*ISCSAR
Trigger: ACGTGCTGAGCAGCTAATTCAGTGCCTGAGGTTACA...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR TCA 90 bp CAATGTATTGGCAGTGTTGCTTTATGTGGTTGCAAGGTAGCTGCAGCAGCTCAGAGTTGGCTTAGCAGGTaGCCAATTGTAGCAAGAATC +
Preference number: 4 (lower is better)
Translates to: QCIGSVALCGCKVAAAAQSWLSR*PIVARI
Trigger: GATTCTTGCTACAATTGGTCACCTGCTAAGCCAACT...CTGAGCTGCTGCAGCTACCTTGCAACCACATAAAGCAACACTGCCAATACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCAACAGGTTAGGCTTCTaGCGAAACCTTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTNRLGF*RNLLPH
Trigger: GTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTT...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGAGTGTGCCCTCTTGTaGCTAAACAGGTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKECALL*LNRLGF
Trigger: GAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp AGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGCTTAGCCACATCCCTGAATaGCACGAACGCCAATATATA +
Preference number: 4 (lower is better)
Translates to: SKNPSSCSAVLNVLAVLLSHIPE*HERQYI
Trigger: TATATATTGGCGTTCGTGGCATTCAGGGATGTGGCT...AAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp CCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGCTTTATGTGGTTAAGAATCCTTCCTCCTaGTCTGCAGTCCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: PSSCSAVLNVLAVLLYVVKNPSS*SAVLNV
Trigger: TACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTT...AACCACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACATCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTSSTKC*HVPAQA
Trigger: CGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGA...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCATCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSSQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTTCCTTGGACTGTGCTaGCTGTTGTTCTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTFLGLC*LLFFRW
Trigger: CCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTCCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 4 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: SQTGVWSLLPLESILLCHGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...GTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp AATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGCTTTATGTGTCTTCATTCTGTGTCTaGACAGAGGTCCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: NPSSCSAVLNVLAVLLYVSSFCV*TEVQWT
Trigger: TGTCCACTGGACCTCTGTCCAGACACAGAATGAAGA...CACATAAAGCAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACAGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EDFLPINLKTAERDDSATVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...TGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAATAAGGCTTGAGCCCTaGGTGTGTCCGCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEIRLEP*VCPLMC
Trigger: ACACATCAGCGGACACACTCAGGGCTCAAGCCTTAT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGTGTGTTTTGAGGTTTaGTTTCCAGCTAAAGTGACG +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQVCFEV*FPAKVT
Trigger: CGTCACTTTAGCTGGAAATCAAACCTCAAAACACAC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAAGGCAGAGCTTGCAGTaGGCAGAGATCGCCATACTA +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAERQSLQ*AEIAIL
Trigger: TAGTATGGCGATCTCTGCTCACTGCAAGCTCTGCCT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 4 (lower is better)
Translates to: WYLAMAEKATALCVSSGVTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACACCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTPSSTK*CHVPAQ
Trigger: CTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGG...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTSQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGTTCTTCAGGTGGGCTaGAAAGTGCCTTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNVLQVG*KVPLKC
Trigger: GCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAAC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACTTCCTTGGACTGTGCTaGCTGTTGTTCTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNFLGLC*LLFFRW
Trigger: CCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTTCTGTGTTGTCTTCCTTaGACTGTGCTGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: FLPINLKTAERDDSATHVLCCLP*TVLAVV
Trigger: AACAACAGCCAGCACAGTCCAAGGAAGACAACACAG...AACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp TCCCAAACAGGAGTCTGGAGTCTTCTCCCTCTTGAATCCATTCTGCTTTGCCACCTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: SQTGVWSLLPLESILLCHLLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...GTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCCCAGTTTGTGTCTTCTaGAGGCTAAGGAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTPVCVF*RLRRFD
Trigger: GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGG...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGCACCACTCAAAAGGTaGGCACAGCAGTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKAPLKR*AQQCKN
Trigger: GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTCATGGTTTGTCTGTaGACCATGCATGTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYLMVCL*TMHVGS
Trigger: GCTCCCTACATGCATGGTTCACAGACAAACCATGAG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR TCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQRWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACAACACAGCCACATCCCTaGATGCCACGAACGCCAATA +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTTQPHP*MPRTPI
Trigger: TATTGGCGTTCGTGGCATTCAGGGATGTGGCTGTGT...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR GCA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTGAAGTGCCATTTTTaGTTACTCTCCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQLKCHF*LLSQTG
Trigger: TCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAA...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTTTGAAGTGCCATTTTTaGTTACTCTCCCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSLKCHF*LLSQTG
Trigger: TCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAA...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATAACAGGTTAGGCTTCTaGCGAAACCTTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYNRLGF*RNLLPH
Trigger: GTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAAACAGGTTAGGCTTCTaGCGAAACCTTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAENRLGF*RNLLPH
Trigger: GTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGCCTGGGCATTTGACTaGCTCCTGCCACTATCATTA +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYAWAFD*LLPLSL
Trigger: TAATGATAGTGGCAGGAGGCAGTCAAATGCCCAGGC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CCAATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGATGTATTGGCAGTGTTaGTTTATGTGGTTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PIVARILPPALQSSMYWQMYWQC*FMWLQG
Trigger: ACCTTGCAACCACATAAAGCAACACTGCCAATACAT...CTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTACTAAGTTGAATTTCTaGCTTCGATTCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSTKLNF*LRFWTE
Trigger: CTCTGTCCAGAATCGAAGCCAGAAATTCAACTTAGT...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
CDS-3UTR CCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAACCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTCCCAGGTGGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 4 (lower is better)
Translates to: FPGGEDFLPINLKTAERDMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...ATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAATCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTCTCCTTCAGGTGGATaGAGATACAAGTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTSPSGG*RYKSYQ
Trigger: CTGGTAAGACTTGTATCTCCATCCACCTGAAGGAGA...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTCAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: PLWYLAMAEKATALCVSSQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGRWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATATGTGTGATCAGGTTTaGCTTCCACGTAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYMCDQV*LPRKAS
Trigger: CGAGGCTTTACGTGGAAGTCAAACCTGATCACACAT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAGTGGGTAATGAGGTTTaGCTTCAGGCTAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEVGNEV*LQAKAL
Trigger: CAGAGCTTTAGCCTGAAGTCAAACCTCATTACCCAC...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGTGTGTTTTGAGGTTTaGTTTCCAGCTAAAGTGACG +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTVCFEV*FPAKVT
Trigger: CGTCACTTTAGCTGGAAATCAAACCTCAAAACACAC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp GATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTGTGTTTTGAGGTTTaGTTTCCAGCTAAAGTGACG +
Preference number: 4 (lower is better)
Translates to: DFLPINLKTAERDDSATHVCFEV*FPAKVT
Trigger: CGTCACTTTAGCTGGAAATCAAACCTCAAAACACAC...ATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR GCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTAAGTTGAATTTCTaGCTTCGATTCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGTKLNF*LRFWTE
Trigger: CTCTGTCCAGAATCGAAGCCAGAAATTCAACTTAGT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAATCCCAAACAGGAGTCTaGAGTCTTCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAESQTGV*SLLPLE
Trigger: TTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGA...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCACTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSLLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 4 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCCAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp GAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACAACTAAGTTGAATTTCTaGCTTCGATTCTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: EDFLPINLKTAERDDSATTKLNF*LRFCSP
Trigger: GGGACTACAGAATCGAAGCCAGAAATTCAACTTAGT...TGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586897.1
ENST00000652615.1
CDS-3UTR CCA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTAAGTTGAATTTCTaGCTTCGATTCTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGTKLNF*LRFCSP
Trigger: GGGACTACAGAATCGAAGCCAGAAATTCAACTTAGT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGTTTTTGATGAGGACTaGCATACTGCCAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYVFDED*HTAKAV
Trigger: GACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAAC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGTGTGTTTTGAGGTTTaGTTTCCAGCTAAAGTGACG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNVCFEV*FPAKVT
Trigger: CGTCACTTTAGCTGGAAATCAAACCTCAAAACACAC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGTGTTTGTTAAGGTTTaGCTTCAGGCTAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNVFVKV*LQAKAL
Trigger: CAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACAC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAGTTCTCAATTCAGTATaGGGATTTAGCCGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEVLNSV*GFSRDC
Trigger: ACAGTCCCGGCTAAATCCTCATACTGAATTGAGAAC...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACATTGTAGACACTGTGTaGTTGACCCTCATGATTCAC +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNIVDTV*LTLMIH
Trigger: GTGAATCATGAGGGTCAACCACACAGTGTCTACAAT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAACCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCCTGCGTGTGCTCTCTaGTGTTTAATGAGAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYPACAL*CLMRVN
Trigger: GTTAACTCTCATTAAACACCAGAGAGCACACGCAGG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACATGAAGTATGACTCCTaGCTAAAGGCTGTACCACAT +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNMKYDS*LKAVPH
Trigger: ATGTGGTACAGCCTTTAGCCAGGAGTCATACTTCAT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAACAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACAAGCCACATCCCTGAATaGCACGAACGCCAATATATA +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTSHIPE*HERQYI
Trigger: TATATATTGGCGTTCGTGGCATTCAGGGATGTGGCT...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR CCA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNLLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGGAAAGCACACCAAATaGGAAGACAGGTTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYGKHTK*EDRFSI
Trigger: AATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGACTTGTTCCAAATCTaGACCTTCCAATGCATCCAA +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYDLFQI*TFQCIQ
Trigger: TTGGATGCATTGGAAGGTCCAGATTTGGAACAAGTC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544914.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAACATACTATCTGGATTTaGAACCCATCTCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEHTIWI*NPSLST
Trigger: TGTGGACAGAGATGGGTTCCAAATCCAGATAGTATG...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS-3UTR TCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAERWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000591471.5
ENST00000652615.1
CDS-3UTR GCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATACCAGTACAGTCTCATaGATAATCACACACAGAATG +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYTSTVS*IITHRM
Trigger: CATTCTGTGTGTGATTATGCATGAGACTGTACTGGT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYLLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAACTCCTTGATAAAGCCTaGCCCAAACTCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAELLDKA*PKLFIF
Trigger: AAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGAG...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAACAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CCA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCAATTCTCCTTCAGGTaGATGGAGATACAAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYQFSFR*MEIQVL
Trigger: TAAGACTTGTATCTCCATCCACCTGAAGGAGAATTG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR TCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACAAGATGGAATTTCCAGTaGGACCAGATGGTTATAAGT +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTRWNFQ*DQMVIS
Trigger: ACTTATAACCATCTGGTCTCACTGGAAATTCCATCT...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS-3UTR GCA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAAGAAGATGGAATTTTTaGTGTGTTTCCTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SCIITHRMSPLWYLAMAERRWNF*CVSSGL
Trigger: AAGACCAGAGGAAACACAGCAAAAATTCCATCTTCT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544914.5
CDS-3UTR CCA 90 bp TTTCTGGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTGACAGACCTACAACTAAGTTGAATTTCTaGCTTCGATTCTGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FLASILLKIRRVICDRPTTKLNF*LRFCSK
Trigger: TTTTGAGCAGAATCGAAGCCAGAAATTCAACTTAGT...TGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS GCA 90 bp ATATATATAGTTCCTACAGCAGGGCTCACTCCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAGGCGGAACGCGGGTGCACGCTGCGG +
Preference number: 5 (lower is better)
Translates to: IYIVPTAGLTPSSTK*CHVPAQAERGCTLR
Trigger: CCGCAGCGTGCACCCGCGTTCCGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGGAACTATATATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS GCA 90 bp TTCCTACAGCAGGGCTCACTCCTTCCTCTACCAAATGCTGCCACGTaGCTGCTCAGGCCTAAGGAGGGAAAGTGGGTGGTGATGAAGAGC +
Preference number: 5 (lower is better)
Translates to: FLQQGSLLPLPNAAT*LLRPKEGKWVVMKS
Trigger: GCTCTTCATCACCACCCACTTTCCCTCCTTAGGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541583.6
ENST00000591134.5
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTTGCCAGCTCTTTTTaGGCTCTCAGGAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAILASSF*ALRSPV
Trigger: CACAGGGCTCCTGAGAGCCAAAAAAGAGCTGGCAAG...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR CAA 90 bp CCACACATGTTGGCTGAGAGCTTGCTGACTGGAGAAAATCAGAGGGCAGGAGGGACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: PHMLAESLLTGENQRAGGTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...CCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586897.1
ENST00000652615.1
CDS-3UTR CAA 90 bp CCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTGTGTTGTACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: PLDLPSVQGWTLYPPLCCTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...ACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCAGGTGTCTCCCCAGTTaGTGTCTTCTGGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: PPSTVRKGRAPENEPAILRCLPS*CLLEAK
Trigger: CTTAGCCTCCAGAAGACACAAACTGGGGAGACACCT...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCCTGAGTGTGCCCTCTaGTGCCTAAACAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIPECAL*CLNRLG
Trigger: GCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGG...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: PPSTVRKGRAPENEPAILGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTAGGTGTCTCCCCAGTTaGTGTCTTCTGGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIRCLPS*CLLEAK
Trigger: CTTAGCCTCCAGAAGACACAAACTGGGGAGACACCT...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTTATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCCCTGAGTGTGCCCTCTaGTGCCTAAACAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: WYLAMAEKATALCVSSGVPECAL*CLNRLG
Trigger: GCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGG...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAACGAACGCCTCTTTTTaGGCTCTCAGGAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGITNASF*ALRSPV
Trigger: CACAGGGCTCCTGAGAGCCAAAAAAGAGGCGTTCGT...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392153.7
CDS-3UTR CAA 90 bp CCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTCTCCCATACTATCTGGATTaGGAACCCATCTCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: PPSTVRKGRAPENEPAILPYYLD*EPISVH
Trigger: GTGGACAGAGATGGGTTCCAAATCCAGATAGTATGG...GAGAATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS TCA 90 bp AACGCCGTTATTCCTCCAGCCCCGGAACAACTCATGGTTTGTCTGTaGACCATGCATGTAGGGAGCATTGTAGACACTGTGTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: NAVIPPAPEQLMVCL*TMHVGSIVDTVWLT
Trigger: GGTCAACCACACAGTGTCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAATAACGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS GCA 90 bp TATATAGTTCCTACAGCAGGGCTCACTCCTTCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCTGAGAATCTAGGTGATGGGTATGTG +
Preference number: 5 (lower is better)
Translates to: YIVPTAGLTPSSTKC*HVPAQAENLGDGYV
Trigger: CACATACCCATCACCTAGATTCTCAGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGGAACTATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS-3UTR CAA 90 bp TCTGTTTCCTCTAGATCTGCCCTCCGTTCAGGGCTGGACCCTATATCCACCACTATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SVSSRSALRSGLDPISTTISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...AGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAACCTGAGTGTGCCCTCTaGTGCCTAAACAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQPECAL*CLNRLG
Trigger: GCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGG...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCAGGTGGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACCCTGAGTGTGCCCTCTaGTGCCTAAACAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: PGGEDFLPINLKTAERDDPECAL*CLNRLG
Trigger: GCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGG...GTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTTCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAISSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS TCA 90 bp ACAACCGTTATTCCTCCAGCCCCGGAACAACTCATGGTTTGTCTGTaGACCATGCATGTAGGGAGCATTGTAGACACTGTGTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: TTVIPPAPEQLMVCL*TMHVGSIVDTVWLT
Trigger: GGTCAACCACACAGTGTCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAATAACGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589801.1
CDS-3UTR CAA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AACCCACCATCCACAGTGAGGAAGGGCAGGGCTCCTGAAAATGAGCCAGCAATTGTCCTCTGGTGTGTTTaGAGGTTTGATTTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: NPPSTVRKGRAPENEPAIVLWCV*RFDFQL
Trigger: TAGCTGGAAATCAAACCTCAAAACACACCAGAGGAC...AATTGCTGGCTCATTTTCAGGAGCCCTGCCCTTCCTCACTGTGGATGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTTATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: PLWYLAMAEKATALCVSSYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS GCA 90 bp ATATATATAGTTCCTACAGCAGGGCTCACTCCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAGGCTGAGAATCTAGGTGATGGGTAT +
Preference number: 5 (lower is better)
Translates to: IYIVPTAGLTPSSTK*CHVPAQAENLGDGY
Trigger: ATACCCATCACCTAGATTCTCAGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGGAACTATATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: PLWYLAMAEKATALCVSSGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGAGGTGTCTCCCCAGTTaGTGTCTTCTGGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGRCLPS*CLLEAK
Trigger: CTTAGCCTCCAGAAGACACAAACTGGGGAGACACCT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCATATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCTCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 5 (lower is better)
Translates to: WYLAMAEKATALCVSSGVSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACACATGTTAGGTGTCTCCCCAGTTaGTGTCTTCTGGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: FLPINLKTAERDDSATHVRCLPS*CLLEAK
Trigger: CTTAGCCTCCAGAAGACACAAACTGGGGAGACACCT...AACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGTCCTCTGGTGTGTTTaGAGGTTTGATTTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIVLWCV*RFDFQL
Trigger: TAGCTGGAAATCAAACCTCAAAACACACCAGAGGAC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ATTGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGTTGCTTTATGTGGTaGCAAGGTAGCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IVARILPPALQSSMYWQCCCFMW*QGSCSS
Trigger: GCTGCTGCAGCTACCTTGCAACCACATAAAGCAACA...ACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR CAA 90 bp TTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACCGTAGACACTGTGTGGTaGACCCTCATGATTCACTCC +
Preference number: 5 (lower is better)
Translates to: FVSMQRHHSKGGHSSVKTVDTVW*TLMIHS
Trigger: GGAGTGAATCATGAGGGTCAACCACACAGTGTCTAC...GGTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGATGTTGGCTGAGAGCTaGCTGACTGGAGAAAATCAG +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGMLAES*LTGENQ
Trigger: CTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACAT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTGGTGTCGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: WYLAMAEKATALCVSSGVEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...GACACCAGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTCTCCTCACTGCAGCTGAGTCTGGGTCTTTTATGGGCTCAGAATAGGGGAATAGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: LSSLQLSLGLLWAQNRGIEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...TATTCCCCTATTCTGAGCCCATAAAAGACCCAGACTCAGCTGCAGTGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTTGTGTCCTTGGGTTTTaGATGAGGACTGACATACTG +
Preference number: 5 (lower is better)
Translates to: PLWYLAMAEKATALCVSSCVLGF*MRTDIL
Trigger: CAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCAGGTGGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTGTGTCCTTGGGTTTTaGATGAGGACTGACATACTG +
Preference number: 5 (lower is better)
Translates to: PGGEDFLPINLKTAERDDCVLGF*MRTDIL
Trigger: CAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA...GTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGGGTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAAGTCCTCTGGTGTGTTTaGAGGTTTGATTTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: KGWDQSEESTPNGKTGSQVLWCV*RFDFQL
Trigger: TAGCTGGAAATCAAACCTCAAAACACACCAGAGGAC...TTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCAGGTGGAGAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACGTCCTCTGGTGTGTTTaGAGGTTTGATTTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: PGGEDFLPINLKTAERDDVLWCV*RFDFQL
Trigger: TAGCTGGAAATCAAACCTCAAAACACACCAGAGGAC...GTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCCTGAGTGTGCCCTCTaGTGCCTAAACAGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYPECAL*CLNRLG
Trigger: GCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGG...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGTCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCATCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAGAGCGAGACTCTGTTaGCTGTGTTTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKRARLC*LCFLWS
Trigger: AGACCAGAGGAAACACAGCAAACAGAGTCTCGCTCT...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TGTAGCAAGAATCCTTCCTCCTGCTCTGCAGTCCTCAATGTATTGGCAGTGTTGGCAGTCCTCAATGTATaGGCAGTGTTGCTTTATGTG +
Preference number: 5 (lower is better)
Translates to: CSKNPSSCSAVLNVLAVLAVLNV*AVLLYV
Trigger: CACATAAAGCAACACTGCCAATACATTGAGGACTGC...CAACACTGCCAATACATTGAGGACTGCAGAGCAGGAGGAAGGATTCTTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591134.5
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGAACACAGCTAGAAGCTaGGGGGAGTTAATTCATCTG +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGNTARS*GELIHL
Trigger: CAGATGAATTAACTCCCCCAAGCTTCTAGCTGTGTT...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGGAACAACTCATGGTTaGTCTGTGAACCATGCATGT +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGGTTHG*SVNHAC
Trigger: ACATGCATGGTTCACAGACAAACCATGAGTTGTTCC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATACTCAGCCACACATGTaGGCTGAGAGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYTQPHM*AESLLT
Trigger: AGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGGAGTCTTCTCCCTCTaGAATCCATTCTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNGVFSL*NPFCFA
Trigger: GGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CCACTTTGGTATCTAGCAATGGCTGAAAAAGCCACAGCACTGTGTGTGTCCTCTTTTGAAGTGCCATTTTaGCTTACTCTCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: PLWYLAMAEKATALCVSSFEVPF*LTLPNR
Trigger: CCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAA...AGAGGACACACACAGTGCTGTGGCTTTTTCAGCCATTGCTAGATACCAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACAGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: EDFLPINLKTAERDDSATGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...TGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATAGGTGTCTCCCCAGTTaGTGTCTTCTGGAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYRCLPS*CLLEAK
Trigger: CTTAGCCTCCAGAAGACACAAACTGGGGAGACACCT...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGACTGTCTGTGTCCTTGGGTTTTaGATGAGGACTGACATACTG +
Preference number: 5 (lower is better)
Translates to: TKWEDRFSIQYEDLAGTVCVLGF*MRTDIL
Trigger: CAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA...GACAGTCCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTCCTCTGGTGTGTTTaGAGGTTTGATTTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSVLWCV*RFDFQL
Trigger: TAGCTGGAAATCAAACCTCAAAACACACCAGAGGAC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATTATCTGCCTGGGCATTaGACTGCCTCCTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYYLPGH*TASCHY
Trigger: ATAGTGGCAGGAGGCAGTCAAATGCCCAGGCAGATA...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCCATAAACTTGAAAACAGCTGAGAGAGATGACTCAGCCACAGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: EDFLPINLKTAERDDSATEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...TGTGGCTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS-3UTR CAA 90 bp AAGCACACCAAATGGGAAGACAGGTTCTCAATTCAGTATGAGGATTTAGCCGGGTTTGAAGTGCCATTTTaGCTTACTCTCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: KHTKWEDRFSIQYEDLAGFEVPF*LTLPNR
Trigger: CCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAA...CCCGGCTAAATCCTCATACTGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp GTTGGGATCAATCGGAGGAAAGCACACCAAATGGGAAGACAGGTTCTCAATTCATTTGAAGTGCCATTTTaGCTTACTCTCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: VGINRRKAHQMGRQVLNSFEVPF*LTLPNR
Trigger: CCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAA...TGAATTGAGAACCTGTCTTCCCATTTGGTGTGCTTTCCTCCGATTGATCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTGATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAATGTGTCCTTGGGTTTTaGATGAGGACTGACATACTG +
Preference number: 5 (lower is better)
Translates to: LICKYAKAPLKRWAQQCKCVLGF*MRTDIL
Trigger: CAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA...TTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACTCTTCAGCTTTAAGGTaGGGTTTCACCAGGTACCCA +
Preference number: 5 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNSSALR*GFTRYP
Trigger: TGGGTACCTGGTGAAACCCAACCTTAAAGCTGAAGA...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAAGAGCGAGACTCTGTTaGCTGTGTTTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SCIITHRMSPLWYLAMAERARLC*LCFLWS
Trigger: AGACCAGAGGAAACACAGCAAACAGAGTCTCGCTCT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591471.5
ENST00000652615.1
CDS GCA 90 bp TCTGAGACTACTTGGTCTCACTATTTGTTCTACTTGAAGCAGTGGTaGCTCTGGGGCTTGGGGGCAAATAACTCACCAATATATATAGTT +
Preference number: 5 (lower is better)
Translates to: SETTWSHYLFYLKQW*LWGLGANNSPIYIV
Trigger: AACTATATATATTGGTGAGTTATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCAAGTAGTCTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS CCA 90 bp ACTACTTGGTCTCACTATTTGTTCTACTTGAAGCAGTGGTGCCTCTaGGGCTTGGGGGCAAATAACTCACCAATATATATAGTTCCTACA +
Preference number: 5 (lower is better)
Translates to: TTWSHYLFYLKQWCL*GLGANNSPIYIVPT
Trigger: TGTAGGAACTATATATATTGGTGAGTTATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCAAGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS-3UTR CAA 90 bp ATTTGTAAGTATGCAAAGGCACCACTCAAAAGGTGGGCACAGCAGTGTAAAAACGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: ICKYAKAPLKRWAQQCKNGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...GTTTTTACACTGCTGTGCCCACCTTTTGAGTGGTGCCTTTGCATACTTACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAATATCCACCACTGTGTaGTCTTCCTTGGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEISTTV*SSLDCA
Trigger: AGCACAGTCCAAGGAAGACAACACAGTGGTGGATAT...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGGCTGGAAAGTGCCTTaGAAGTGCCATTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYGWKVP*KCHFCL
Trigger: TAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATTGTGTCCTTGGGTTTTaGATGAGGACTGACATACTG +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYCVLGF*MRTDIL
Trigger: CAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp TCATGCATAATCACACACAGAATGTCTCCACTTTGGTATCTAGCAATGGCTGAAGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: SCIITHRMSPLWYLAMAEEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...TTCAGCCATTGCTAGATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATGAATGGATCCTGCTGTaGTTTCTGATCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYEWILL*FLIFWI
Trigger: TATCCAGAAGATCAGAAACAACAGCAGGATCCATTC...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS-3UTR CAA 90 bp CTTACCAGTACAGTCTCATGCATAATCACACACAGAATGTCTCCACTTTGGTATTTTGAAGTGCCATTTTaGCTTACTCTCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LTSTVSCIITHRMSPLWYFEVPF*LTLPNR
Trigger: CCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAA...ATACCAAAGTGGAGACATTCTGTGTGTGATTATGCATGAGACTGTACTGGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324411.8
ENST00000392153.7
ENST00000541583.6
ENST00000544914.5
ENST00000591471.5
ENST00000652615.1
CDS GCA 72 bp CAGGGCTCACTCCTTCCTCTACCAAATGCTGCCACGTaGCTGCTCAGGCGGAACGCGGGTGCACGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: QGSLLPLPNAAT*LLRRNAGARCG
Trigger: TCCGCAGCGTGCACCCGCGTTCCGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS GCA 72 bp CCTACAGCAGGGCTCACTCCTTCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCGGAACGCGGGTGCACG +
Preference number: 6 (lower is better)
Translates to: PTAGLTPSSTKC*HVPAQAERGCT
Trigger: CGTGCACCCGCGTTCCGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS TCA 72 bp AAGAGTGGCCTAGGTGGAAACACCCTCCCCACGAAGTaGAGCGCAGTCCGCTCCAGAGCCCCACAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: KSGLGGNTLPTK*SAVRSRAPQLG
Trigger: CCCCAACTGTGGGGCTCTGGAGCGGACTGCGCTTCACTTCGTGGGGAGGGTGTTTCCACCTAGGCCACTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590582.1
CDS GCA 72 bp GTTCCTACAGCAGGGCTCACTCCTTCCTCTACCAAATaGTGCCACGTGCCTGCTCAGGCGGAACGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: VPTAGLTPSSTK*CHVPAQAERGC
Trigger: GCACCCGCGTTCCGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592168.5
CDS GCA 72 bp ATGCAGGAGAATCGTTTGAACCCGGGAGGTGGAGATTaGAGTGAGCCGAGATCGCGCCACTCCCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: MQENRLNPGGGD*SEPRSRHSPPA
Trigger: GGCTGGAGGGGAGTGGCGCGATCTCGGCTCACTGCAATCTCCACCTCCCGGGTTCAAACGATTCTCCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587570.1
CDS GCA 72 bp CAGGGCTCACTCCTTCCTCTACCAAATGCTGCCACGTaGCTGCTCAGGCCTAAGGAGGGAAAGTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: QGSLLPLPNAAT*LLRPKEGKWVV
Trigger: CACCACCCACTTTCCCTCCTTAGGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541583.6
ENST00000591134.5
CDS TCA 72 bp GGAGAATGGTGTGAACCCGGAAGGCAGAGCTTGCAGTaGGCAGAGATCGCCATACTACACTCCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GEWCEPGRQSLQ*AEIAILHSSLG
Trigger: GCCCAGGCTGGAGTGTAGTATGGCGATCTCTGCTCACTGCAAGCTCTGCCTTCCGGGTTCACACCATTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591471.5
ENST00000591485.5
ENST00000592362.5
ENST00000652615.1
CDS GCA 72 bp AGGTGGGAGAATGGTGTGAACCCGGAAGGCAGAGCTTaGAGTGAGCAGAGATCGCCATACTACACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RWENGVNPEGRA*SEQRSPYYTPA
Trigger: GGCTGGAGTGTAGTATGGCGATCTCTGCTCACTGCAAGCTCTGCCTTCCGGGTTCACACCATTCTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591471.5
ENST00000591485.5
ENST00000592362.5
ENST00000652615.1
CDS GCA 72 bp CCTACAGCAGGGCTCACTCCTTCCTCTACCAAATGCTaGCACGTGCCTGCTCAGGCTGAGAATCTAGGTGAT +
Preference number: 6 (lower is better)
Translates to: PTAGLTPSSTKC*HVPAQAENLGD
Trigger: ATCACCTAGATTCTCAGCCTGAGCAGGCACGTGGCAGCATTTGGTAGAGGAAGGAGTGAGCCCTGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS CAA 90 bp TGCCACGAACGCCGTTATTCCTCCAGCCCCGGAACAACTCATGGTTaGTCTGTGAACCATGCATGTAGGGAGCATTGTAGACACTGTGTG +
Preference number: 6 (lower is better)
Translates to: CHERRYSSSPGTTHG*SVNHACREHCRHCV
Trigger: CACACAGTGTCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAATAACGGCGTTCGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS CAA 72 bp CGCCGTTATTCCTCCAGCCCCGGAACAACTCATGGTTaGTCTGTGAACCATGCATGTAGGGAGCATTGTAGA +
Preference number: 6 (lower is better)
Translates to: RRYSSSPGTTHG*SVNHACREHCR
Trigger: TCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAATAACGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS TCA 72 bp ATTCCTCCAGCCCCGGAACAACTCATGGTTTGTCTGTaGACCATGCATGTAGGGAGCATTGTAGACACTGTG +
Preference number: 6 (lower is better)
Translates to: IPPAPEQLMVCL*TMHVGSIVDTV
Trigger: CACAGTGTCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000589801.1
CDS CCA 72 bp GAAAATCAGAGGGCAGGAGGGACTAAGTTGAATTTCTaGCTTCGATTCTGCTGGACAGAGGTCCAGTGGACA +
Preference number: 6 (lower is better)
Translates to: ENQRAGGTKLNF*LRFCWTEVQWT
Trigger: TGTCCACTGGACCTCTGTCCAGCAGAATCGAAGCCAGAAATTCAACTTAGTCCCTCCTGCCCTCTGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589392.5
ENST00000591391.5
CDS CCA 72 bp GAAAATCAGAGGGCAGGAGGGACTAAGTTGAATTTCTaGCTTCGATTCTGTAGTCCCAGCTACTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: ENQRAGGTKLNF*LRFCSPSYSGG
Trigger: GCCTCCTGAGTAGCTGGGACTACAGAATCGAAGCCAGAAATTCAACTTAGTCCCTCCTGCCCTCTGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652615.1
CDS CCA 72 bp ACTACTTGGTCTCACTATTTGTTCTACTTGAAGCAGTaGTGCCTCTGGGGCTTGGGGGCAAATAACTCACCA +
Preference number: 6 (lower is better)
Translates to: TTWSHYLFYLKQ*CLWGLGANNSP
Trigger: TGGTGAGTTATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCAAGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS CAA 72 bp ACCATGCATGTAGGGAGCATTGTAGACACTGTGTGGTaGACCCTCATGATTCACTCCAAATCTCTCCCACTG +
Preference number: 6 (lower is better)
Translates to: TMHVGSIVDTVW*TLMIHSKSLPL
Trigger: CAGTGGGAGAGATTTGGAGTGAATCATGAGGGTCAACCACACAGTGTCTACAATGCTCCCTACATGCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324411.8
ENST00000589801.1
CDS CAA 72 bp AACCGTTATTCCTCCAGCCCCGGAACAACTCATGGTTaGTCTGTGAACCATGCATGTAGGGAGCATTGTAGA +
Preference number: 6 (lower is better)
Translates to: NRYSSSPGTTHG*SVNHACREHCR
Trigger: TCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTTCCGGGGCTGGAGGAATAACGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589801.1
CDS CAA 90 bp TGGTCTCACTATTTGTTCTACTTGAAGCAGTGGTGCCTCTGGGGCTaGGGGGCAAATAACTCACCAATATATATAGTTCCTACAGCAGGG +
Preference number: 6 (lower is better)
Translates to: WSHYLFYLKQWCLWG*GANNSPIYIVPTAG
Trigger: CCCTGCTGTAGGAACTATATATATTGGTGAGTTATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS TCA 72 bp TTTCTGAGACTACTTGGTCTCACTATTTGTTCTACTTaGAGCAGTGGTGCCTCTGGGGCTTGGGGGCAAATA +
Preference number: 6 (lower is better)
Translates to: FLRLLGLTICST*SSGASGAWGQI
Trigger: TATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCAAGTAGTCTCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS GCA 72 bp ACTTGGTCTCACTATTTGTTCTACTTGAAGCAGTGGTaGCTCTGGGGCTTGGGGGCAAATAACTCACCAATA +
Preference number: 6 (lower is better)
Translates to: TWSHYLFYLKQW*LWGLGANNSPI
Trigger: TATTGGTGAGTTATTTGCCCCCAAGCCCCAGAGGCACCACTGCTTCAAGTAGAACAAATAGTGAGACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS CCA 72 bp TTTATAAGGGTTCACTTGGTTTATGGTTCTGAACACTaGGAAAGTGAGGGGCCTGCATCTGGTGAAGGTCTC +
Preference number: 6 (lower is better)
Translates to: FIRVHLVYGSEH*ESEGPASGEGL
Trigger: GAGACCTTCACCAGATGCAGGCCCCTCACTTTCCCAGTGTTCAGAACCATAAACCAAGTGAACCCTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589218.5
CDS CCA 72 bp ACAGCAGCTCACGTTTCTTTGTGCATCAGACTCACCTaGGGACTTGTTAAACACAGATTGTTGGGTCTCACT +
Preference number: 6 (lower is better)
Translates to: TAAHVSLCIRLT*GLVKHRLLGLT
Trigger: AGTGAGACCCAACAATCTGTGTTTAACAAGTCCCCAGGTGAGTCTGATGCACAAAGAAACGTGAGCTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589218.5
CDS CAA 90 bp TCTTTGTGCATCAGACTCACCTGGGGACTTGTTAAACACAGATTGTaGGGTCTCACTCCTAGAGTTTCTTCTTCAGTATTCTGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: SLCIRLTWGLVKHRL*GLTPRVSSSVFWGA
Trigger: TGCTCCCCAGAATACTGAAGAAGAAACTCTAGGAGTGAGACCCAACAATCTGTGTTTAACAAGTCCCCAGGTGAGTCTGATGCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589218.5
CDS CAA 90 bp ATTCACTCCAAATCTCTCCCACTGAGTAGAAACACAGCTAGAAGCTaGGGGGAGTTAATTCATCTGCTTGCCAGTTGCTGTGTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: IHSKSLPLSRNTARS*GELIHLLASCCVSS
Trigger: AGAGGAAACACAGCAACTGGCAAGCAGATGAATTAACTCCCCCAAGCTTCTAGCTGTGTTTCTACTCAGTGGGAGAGATTTGGAGTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589801.1
CDS CAA 72 bp AAATCTCTCCCACTGAGTAGAAACACAGCTAGAAGCTaGGGGGAGTTAATTCATCTGCTTGCCAGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: KSLPLSRNTARS*GELIHLLASCC
Trigger: ACAGCAACTGGCAAGCAGATGAATTAACTCCCCCAAGCTTCTAGCTGTGTTTCTACTCAGTGGGAGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589801.1
CDS TCA 72 bp GGCTTCGATTCTGCTCAAAATAAGAAGAGTTATCTGTaGCAGACCTACAGCCAACTTCATACTGAATGGGCG +
Preference number: 6 (lower is better)
Translates to: GFDSAQNKKSYL*QTYSQLHTEWA
Trigger: CGCCCATTCAGTATGAAGTTGGCTGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGCAGAATCGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590570.1
ENST00000592168.5
CDS CCA 72 bp ATGAAGAGCGTGGATTCAACCCATACTATCTGGATTTaGAACCCATCTCTGTCCACAACTAGTGTAACCTCA +
Preference number: 6 (lower is better)
Translates to: MKSVDSTHTIWI*NPSLSTTSVTS
Trigger: TGAGGTTACACTAGTTGTGGACAGAGATGGGTTCCAAATCCAGATAGTATGGGTTGAATCCACGCTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541583.6
CDS CAA 72 bp AAATCTCTCCCACTGAGTAGAAACACAGCTAGAAGCTaGGGGGAGTTAATTCATCTGCTTGCCAGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: KSLPLSRNTARS*GELIHLLASSF
Trigger: AAAAGAGCTGGCAAGCAGATGAATTAACTCCCCCAAGCTTCTAGCTGTGTTTCTACTCAGTGGGAGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324411.8
CDS CAA 72 bp ATATGTCTGAAACTGTTCATCATTAAACACTCTTTTTaGGCTCTCAGGAGCCCTGTGGCCATTTTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: ICLKLFIIKHSF*ALRSPVAIFLV
Trigger: GACCAGGAAAATGGCCACAGGGCTCCTGAGAGCCAAAAAAGAGTGTTTAATGATGAACAGTTTCAGACATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590386.5
CDS TCA 72 bp AGTGAGACTTCATCTCAAAATAAGAAGAGTTATCTGTaGCAGACCTACAGCCAACTTCATACTGAATGGGCG +
Preference number: 6 (lower is better)
Translates to: SETSSQNKKSYL*QTYSQLHTEWA
Trigger: CGCCCATTCAGTATGAAGTTGGCTGTAGGTCTGTCACAGATAACTCTTCTTATTTTGAGATGAAGTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591471.5