RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF862 (Homo sapiens)

Ensembl gene IDs: ENSG00000106479

Ensembl transcript IDs: ENST00000223210.5, ENST00000460379.1, ENST00000478024.1, ENST00000488265.1, ENST00000489820.5

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACAGGACCTaGCTGAGCCAGGCAGCAAGCAAGCTGGGATGGATGGCGCCCACT +
Preference number: 1 (lower is better)
Translates to: GERAHPQGPAAQHRT*LSQAASKLGWMAPT
Trigger: AGTGGGCGCCATCCATCCCAGCTTGCTTGCTGCCTGGCTCAGGCAGGTCCTGTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp ACTCCAACTTCGTCCCATCCTCTCCTGGGTAAACCGGGCCGGGCATaGCACGGGTTAAACGCGGCTCGGCTCTCCGGGAAGCACCAGACC +
Preference number: 1 (lower is better)
Translates to: TPTSSHPLLGKPGRA*HGLNAARLSGKHQT
Trigger: GGTCTGGTGCTTCCCGGAGAGCCGAGCCGCGTTTAACCCGTGGCATGCCCGGCCCGGTTTACCCAGGAGAGGATGGGACGAAGTTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp CACGGGTTAAACGCGGCTCGGCTCTCCGGGAAGCACCAGACCCCCTaGCAGAAGAGCCCAGCTCCACCATCTGGAGCTGCAGGAAGAGAA +
Preference number: 1 (lower is better)
Translates to: HGLNAARLSGKHQTP*QKSPAPPSGAAGRE
Trigger: TTCTCTTCCTGCAGCTCCAGATGGTGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGCTTCCCGGAGAGCCGAGCCGCGTTTAACCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CACGCAGATAGTAACACCTCCCAGAGCTCCCGCACCACAGGCCTGTaGGGTCCCTCTGACCGCCAGACCCACAGGGCTGGGAGACATTTC +
Preference number: 1 (lower is better)
Translates to: HADSNTSQSSRTTGL*GPSDRQTHRAGRHF
Trigger: GAAATGTCTCCCAGCCCTGTGGGTCTGGCGGTCAGAGGGACCCCACAGGCCTGTGGTGCGGGAGCTCTGGGAGGTGTTACTATCTGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp AAGGAAGGCACTGGCCGGTGTCCTCGGAGCACGCTGATGCTGACGTaGAGAGGGCGAGTTGCTTCCCCTAGCTTCCACCTCAGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: KEGTGRCPRSTLMLT*RGRVASPSFHLSSR
Trigger: TCTGGAGCTGAGGTGGAAGCTAGGGGAAGCAACTCGCCCTCTCCACGTCAGCATCAGCGTGCTCCGAGGACACCGGCCAGTGCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp ATGGCTGTGCTGAGTGGGGCCTCAGGAAACAGGTCATGCACCTCCTaGTACCCCTGCTGCTCTGGGATGCCACTGCCCACTTCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: MAVLSGASGNRSCTS*YPCCSGMPLPTSWC
Trigger: GCACCAGGAAGTGGGCAGTGGCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAGCACAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp GCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCACTaGGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGG +
Preference number: 1 (lower is better)
Translates to: AGPKSLEEVVQSPCH*APIRGCLSGPWRSW
Trigger: CCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp TGTTCAAAGCCCTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTaGGCCCTGGAGATCCTGGTGCAGAGTCCCCAGGGCAGCTCAGAG +
Preference number: 1 (lower is better)
Translates to: CSKPLSLSAHSGMSQ*ALEILVQSPQGSSE
Trigger: CTCTGAGCTGCCCTGGGGACTCTGCACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp GATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGCTaGGACTCCAGCCAAAGCGGGAGTGCATGCTTCTTCCCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: DAVKTTGKEEGGDKR*DSSQSGSACFFPSQ
Trigger: CTGGGAGGGGAAGAAGCATGCACTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp AAGCCCTGGGAAGAGGTAGAGTTCCGCACGAGACCACGGCCTCACTaGTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACAATGCC +
Preference number: 1 (lower is better)
Translates to: KPWEEVEFRTRPRPH*FCCGSQGRKSQNNA
Trigger: GGCATTGTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCTCGTGCGGAACTCTACCTCTTCCCAGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp GGAGGAGGGTGGCGACAAGCGCTGGGACTCCAGCCAAAGCGGGAGTaGATGCTTCTTCCCCTCCCAGAGCCCTGTGGTTTTTCTTCTTGT +
Preference number: 1 (lower is better)
Translates to: GGGWRQALGLQPKRE*MLLPLPEPCGFSSC
Trigger: ACAAGAAGAAAAACCACAGGGCTCTGGGAGGGGAAGAAGCATGCACTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACCCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CGGGAAGCACCAGACCCCCTGCCAGAAGAGCCCAGCTCCACCATCTaGAGCTGCAGGAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGG +
Preference number: 1 (lower is better)
Translates to: REAPDPLPEEPSSTI*SCRKRTFLGALCKG
Trigger: CCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTCCTGCAGCTCCAGATGGTGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGCTTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp GCACCAGACCCCCTGCCAGAAGAGCCCAGCTCCACCATCTGGAGCTaGAGGAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTG +
Preference number: 1 (lower is better)
Translates to: APDPLPEEPSSTIWS*RKRTFLGALCKGLV
Trigger: CACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTCCTGCAGCTCCAGATGGTGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp GGCGGTGGTTCTGTGGTTCTGAAGCTAGAGCAGGCCCAAAGTCCCTaGAGGAGGTTGTTCAAAGCCCTTGTCACTGAGCGCCCATTCGGG +
Preference number: 1 (lower is better)
Translates to: GGGSVVLKLEQAQSP*RRLFKALVTERPFG
Trigger: CCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAGAACCACAGAACCACCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp CTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGTTCCTaGACGCCCATGGAGACGGTGATGGGGAGAAGGAGGCCTGTGTGT +
Preference number: 1 (lower is better)
Translates to: LSTSSHPQCLTWASS*TPMETVMGRRRPVC
Trigger: ACACACAGGCCTCCTTCTCCCCATCACCGTCTCCATGGGCGTTCAGGAACTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp AGAGACCATCGCCACCAGCAGAAGATCCTAGGGCAGCCTAGAATCTaGAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAGTC +
Preference number: 1 (lower is better)
Translates to: RDHRHQQKILGQPRI*RACPSDHRGVSKAV
Trigger: GACTGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTGCCCTAGGATCTTCTGCTGGTGGCGATGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp TACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCTCCTaGTCTGAGGGATTCTTCAAGGATGAAGAGGCCGCAGGAAGCATG +
Preference number: 1 (lower is better)
Translates to: YSHRDPLTAAHRMAS*SEGFFKDEEAAGSM
Trigger: CATGCTTCCTGCGGCCTCTTCATCCTTGAAGAATCCCTCAGAGCAGGAGGCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp TCATCAGGGAGAGGGAGGGGAAATGCCAGGACACGTACATACGGATaGTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGCTG +
Preference number: 1 (lower is better)
Translates to: SSGRGRGNARTRTYG*CQDYRQGGGWRQAL
Trigger: CAGCGCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTCCCCTCCCTCTCCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CCTGGAGATCCTGGTGCAGAGTCCCCAGGGCAGCTCAGAGAAGAGTaGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCT +
Preference number: 1 (lower is better)
Translates to: PGDPGAESPGQLREE*TSLSCRWCIQRATP
Trigger: AGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGGACTCTGCACCAGGATCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp GCACAGCACAGGACCTGCCTGAGCCAGGCAGCAAGCAAGCTGGGATaGATGGCGCCCACTTCCTGCCTGTTTAAAACAAGTATCAGGCAG +
Preference number: 1 (lower is better)
Translates to: AQHRTCLSQAASKLG*MAPTSCLFKTSIRQ
Trigger: CTGCCTGATACTTGTTTTAAACAGGCAGGAAGTGGGCGCCATCCATCCCAGCTTGCTTGCTGCCTGGCTCAGGCAGGTCCTGTGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp TCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATaGCCTCCTGCTCTGAGGGATTCTTCAAGGATGAAGAGGCCGCAG +
Preference number: 1 (lower is better)
Translates to: SRTTPTETHSRLLTG*PPALRDSSRMKRPQ
Trigger: CTGCGGCCTCTTCATCCTTGAAGAATCCCTCAGAGCAGGAGGCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp ACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTaGCGACAAGCGCTGGGACTCCAGCCAAAGCGGGAGTGCATGCTT +
Preference number: 1 (lower is better)
Translates to: TRTYGCCQDYRQGGG*RQALGLQPKRECML
Trigger: AAGCATGCACTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp AACCTTCTGGCACATTTGTGTGCTGTGAGGCATGGCTGTGCTGAGTaGGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTG +
Preference number: 1 (lower is better)
Translates to: NLLAHLCAVRHGCAE*GLRKQVMHLLIPLL
Trigger: CAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTCACAGCACACAAATGTGCCAGAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CAAGGTGGTCTTTCCCATTCCCACTTAGACTGTGGGCAGCCTCCCTaGAACATTCCCCAGGGATGTCCAACAGTCTCCCCTACCAGGACA +
Preference number: 1 (lower is better)
Translates to: QGGLSHSHLDCGQPP*NIPQGCPTVSPTRT
Trigger: TGTCCTGGTAGGGGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAATGGGAAAGACCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CCTCCCCCTCTAACAAGGTGGTCTTTCCCATTCCCACTTAGACTGTaGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTC +
Preference number: 1 (lower is better)
Translates to: PPPLTRWSFPFPLRL*AASLEHSPGMSNSL
Trigger: GAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAATGGGAAAGACCACCTTGTTAGAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp GCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTaGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCA +
Preference number: 1 (lower is better)
Translates to: AKTELPLEGKVLHFR*KEDRGEEGVNLAVP
Trigger: TGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp TGTCAGACCCGGTGGGTATCAGTCATCAGGGAGAGGGAGGGGAAATaGCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGG +
Preference number: 1 (lower is better)
Translates to: CQTRWVSVIREREGK*QDTYIRMLSRLQAR
Trigger: CCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTCCCCTCCCTCTCCCTGATGACTGATACCCACCGGGTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp AGCACCCTAGAAACTCATCCTCTGCAGGAGAGAGAAGCAAGGGTCTaGAGCGCGGTCACATACTCTAAGGTATCTTCCAGGACAGGGGGC +
Preference number: 1 (lower is better)
Translates to: STLETHPLQEREARV*SAVTYSKVSSRTGG
Trigger: GCCCCCTGTCCTGGAAGATACCTTAGAGTATGTGACCGCGCTCCAGACCCTTGCTTCTCTCTCCTGCAGAGGATGAGTTTCTAGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp ATAGAACCTTCTGGCACATTTGTGTGCTGTGAGGCATGGCTGTGCTaGGTGGGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCT +
Preference number: 1 (lower is better)
Translates to: IEPSGTFVCCEAWLC*VGPQETGHAPPDTP
Trigger: AGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTCACAGCACACAAATGTGCCAGAAGGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp GCCCAGCTCCACCATCTGGAGCTGCAGGAAGAGAACTTTCTTGGGTaGTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAAAGGAAGCC +
Preference number: 1 (lower is better)
Translates to: AQLHHLELQEENFLG*SVQRACDCFALKEA
Trigger: GGCTTCCTTTAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTCCTGCAGCTCCAGATGGTGGAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp GCAGAGTCCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTaGAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTG +
Preference number: 1 (lower is better)
Translates to: AESPGQLREEWTSLS*RWCIQRATPTTRTL
Trigger: CAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGGACTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp ATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTaGCCTTGGAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATC +
Preference number: 1 (lower is better)
Translates to: ILLLISGLLSLPRRS*PWKEKCFTLGGRKI
Trigger: GATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp CAGCAGGCACTTGGATCTCTGCTGCCACTTCATGGAGAGGGAAACTaGGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: QQALGSLLPLHGEGN*GTKRKGLIRPLPAA
Trigger: TGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCTCAGTTTCCCTCTCCATGAAGTGGCAGCAGAGATCCAAGTGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp TCCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATaGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACA +
Preference number: 1 (lower is better)
Translates to: SPGQLREEWTSLSCR*CIQRATPTTRTLET
Trigger: TGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp TCAGGCAGGGCAGAGAAACCCTGCCTGCTGACTTGCCTCATTTCCTaGCCATGGTTAAGGAAGGCAGAACCTAGACAAAATCATCCTCCT +
Preference number: 1 (lower is better)
Translates to: SGRAEKPCLLTCLIS*PWLRKAEPRQNHPP
Trigger: AGGAGGATGATTTTGTCTAGGTTCTGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCTGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp CCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTaGATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAAT +
Preference number: 1 (lower is better)
Translates to: PGQLREEWTSLSCRW*IQRATPTTRTLETN
Trigger: ATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTaGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATGGGGCA +
Preference number: 1 (lower is better)
Translates to: RADGAFREQLLQQGL*RQIPTCPTKDEDGA
Trigger: TGCCCCATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp TCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTaGGTATCAGTCATCAGGGAGAGGGAGGGGAAATGCCAGGACACG +
Preference number: 1 (lower is better)
Translates to: SNYQLHTGYLECQTR*VSVIREREGKCQDT
Trigger: CGTGTCCTGGCATTTCCCCTCCCTCTCCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 90 bp CCAGGGCCTCTGATAAGGATGCTCACTGTGTTTCCACGGGGGTCCTaGATGAGGAAGTTCAGGAATAAGATGGCAGTCATCTTCTTCCTT +
Preference number: 1 (lower is better)
Translates to: PGPLIRMLTVFPRGS*MRKFRNKMAVIFFL
Trigger: AAGGAAGAAGATGACTGCCATCTTATTCCTGAACTTCCTCATTCAGGACCCCCGTGGAAACACAGTGAGCATCCTTATCAGAGGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp AAGTTCAGGAATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTaGCTGACAAAGGGGAACGGAGCAGGCCTGTGCCCCTTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: KFRNKMAVIFFLLGH*LTKGNGAGLCPLRN
Trigger: ATTTCTCAAGGGGCACAGGCCTGCTCCGTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATTCCTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGTTACTTaGAATGTCAGACCCGGTGGGTATCAGTCATCAGGGAGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: RYGYWDQTTSYILVT*NVRPGGYQSSGRGR
Trigger: CCTCCCTCTCCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 90 bp TTAAAACAAGTATCAGGCAGGGCAGAGAAACCCTGCCTGCTGACTTaGCTCATTTCCTGCCCATGGTTAAGGAAGGCAGAACCTAGACAA +
Preference number: 1 (lower is better)
Translates to: LKQVSGRAEKPCLLT*LISCPWLRKAEPRQ
Trigger: TTGTCTAGGTTCTGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCTGCCTGATACTTGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 90 bp CCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTaGTTACTTGGAATGTCAGACCCGGTGGGTATCAGTCATCAGGGA +
Preference number: 1 (lower is better)
Translates to: PGVAMAIGIKLPVTY*LLGMSDPVGISHQG
Trigger: TCCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGGCCTCTGGGGGCTCTTaGAGCCAGGCCAGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: LPWEWEAADYGERAHPQGASGGS*SQASCP
Trigger: GGGACAGCTGGCCTGGCTGCAAGAGCCCCCAGAGGC...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTCCTGTGGGGTCCCTCTaGCCGCCAGACCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: VRHKQEASPTRGSPALGAPVGSL*PPDPQG
Trigger: GCCCTGTGGGTCTGGCGGTCAGAGGGACCCCACAGG...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTAGACCACGGCCTCACTaGTTCTGCTGTGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: IILLLISGLLSLPRRSCPRPRPH*FCCGSQ
Trigger: CTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTTCGGGGATGTCTCAGTaGGCCCTGGAGATCCTGGTG +
Preference number: 2 (lower is better)
Translates to: IILLLISGLLSLPRRSCPSGMSQ*ALEILV
Trigger: CACCAGGATCTCCAGGGCCCACTGAGACATCCCCGA...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCGAGGCATGGCTGTGCTaGGTGGGGCCTCAGGAAACA +
Preference number: 2 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGEAWLC*VGPQET
Trigger: TGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTC...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAAGCACCAGACCCCCTaGCAGAAGAGCCCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: PQGSSEKSGLACRADGAFKHQTP*QKSPAP
Trigger: TGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGCTT...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCCTGGAGATCCTGGTaGAGAGTCCCCAGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: KIILLLISGLLSLPRRSCPWRSW*RVPRAA
Trigger: AGCTGCCCTGGGGACTCTGCACCAGGATCTCCAGGG...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGAGGGCAGAGAAACCCTaGCTGCTGACTTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: LPWEWEAADYGERAHPQGRAEKP*LLTCLI
Trigger: AATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCT...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTCGTCCCATCCTCTCCTaGGTAAACCGGGCCGGGCAT +
Preference number: 2 (lower is better)
Translates to: RHKEEGINQTTACSRAGARPILS*VNRAGH
Trigger: ATGCCCGGCCCGGTTTACCCAGGAGAGGATGGGACG...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTCAGGCCCAAAGTCCCTaGAGGAGGTTGTTCAAAGCC +
Preference number: 2 (lower is better)
Translates to: IILLLISGLLSLPRRSCPQAQSP*RRLFKA
Trigger: GGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTG...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAGCCAGAGGTCTTTaGGGGAGCTCGAGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRAARGL*GSSRLS
Trigger: TGAGAGCCTCGAGCTCCCTCAAAGACCTCTGGCTGC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCCAGGACACTCCTCTTaGCACCAAAACTCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PQGSSEKSGLACRADGAFPGHSS*HQNSGA
Trigger: AGCCCCTGAGTTTTGGTGGCAAGAGGAGTGTCCTGG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGATACCCCTGCTGCTCTaGGATGCCACTGCCCACTTC +
Preference number: 2 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKIPLLL*DATAHF
Trigger: GAAGTGGGCAGTGGCATCCCAGAGCAGCAGGGGTAT...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCCCCTCTAACAAGGTaGTCTTTCCCATTCCCACTT +
Preference number: 2 (lower is better)
Translates to: LPWEWEAADYGERAHPQGPPLTR*SFPFPL
Trigger: AAGTGGGAATGGGAAAGACCACCTTGTTAGAGGGGG...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGTGCCTGCAGCAGAGCTaGGGCTGCATCCCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVCLQQS*GCIPSL
Trigger: GAGGCTTGGGATGCAGCCCCAGCTCTGCTGCAGGCA...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTAGAAACCCTGCCTGCTaGCTTGCCTCATTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: VRHKQEASPTRGSPALGARNPAC*LASFPA
Trigger: GGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCT...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGCGGCCTCACTGCTTCTaGTGTGGGAGCCAGGGTAGG +
Preference number: 2 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEERPHCF*CGSQGR
Trigger: CCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCG...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCCATGGCTGTGCTGAGTaGGGCCTCAGGAAACAGGTC +
Preference number: 2 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVHGCAE*GLRKQV
Trigger: GACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATG...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCTGTCTCAGTGGGCCCTaGAGATCCTGGTGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: TYIRMLSRLQARRRVATSCLSGP*RSWCRV
Trigger: GACTCTGCACCAGGATCTCCAGGGCCCACTGAGACA...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CAA 90 bp TCTGTGGTTCTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTaGTTCAAAGCCCTTGTCACTGAGCGCCCATTCGGGGATGTCTCA +
Preference number: 2 (lower is better)
Translates to: SVVLKLEQAQSPWRR*FKALVTERPFGDVS
Trigger: TGAGACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAGAACCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGAGGTCATGCACCTCCTaGTACCCCTGCTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLRSCTS*YPCCSG
Trigger: CCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCT...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTCGCAGGAAGCATGTGTaGTGGAACAGCACCTTGATG +
Preference number: 2 (lower is better)
Translates to: VRHKQEASPTRGSPALGARRKHV*WNSTLM
Trigger: CATCAAGGTGCTGTTCCAGCACACATGCTTCCTGCG...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTCCACTGCCCACTTCCTaGTGCTTAGAGACCATCGCC +
Preference number: 2 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGPLPTS*CLETIA
Trigger: GGCGATGGTCTCTAAGCACCAGGAAGTGGGCAGTGG...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACCGCACCACAGGCCTGTaGGGTCCCTCTGACCGCCAG +
Preference number: 2 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNRTTGL*GPSDRQ
Trigger: CTGGCGGTCAGAGGGACCCCACAGGCCTGTGGTGCG...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCGAGAACTTTCTTGGGTaGTCTGTGCAAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PQGSSEKSGLACRADGAFENFLG*SVQRAC
Trigger: ACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTC...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGATTCCCACTTAGACTGTaGGCAGCCTCCCTGGAACAT +
Preference number: 2 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRFPLRL*AASLEH
Trigger: ATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCCAGCTCAGAGAAGAGTaGACTAGCCTGTCGTGCAGA +
Preference number: 2 (lower is better)
Translates to: TYIRMLSRLQARRRVATSQLREE*TSLSCR
Trigger: TCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTG...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGAAACAGCATTCTCAGTaGCCCCGCTGCACAGGGACC +
Preference number: 2 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEEKQHSQ*PRCTGT
Trigger: GGTCCCTGTGCAGCGGGGCCACTGAGAATGCTGTTT...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTCACATTTGTGTGCTGTaGGGCATGGCTGTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGHICVL*GMAVLS
Trigger: ACTCAGCACAGCCATGCCTCACAGCACACAAATGTG...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGAAGTCCCAGAACAATaGCTCTGGGGGCTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEEEVPEQ*LWGLLQ
Trigger: CTGCAAGAGCCCCCAGAGGCATTGTTCTGGGACTTC...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCAGCAGAGCTGGGGCTaGATCCCAAGCCTCCCAACT +
Preference number: 2 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILQQSWG*IPSLPT
Trigger: AGTTGGGAGGCTTGGGATGCAGCCCCAGCTCTGCTG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCTGGACTAGCCTGTCGTaGAGATGGTGCATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVWTSLS*RWCIQR
Trigger: TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCA...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGCAAGCTGGGATGGATaGCGCCCACTTCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILASWDG*RPLPAC
Trigger: ACAGGCAGGAAGTGGGCGCCATCCATCCCAGCTTGC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAAGGCAAGGAGGAGGGTaGCGACAAGCGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVRQGGG*RQALGL
Trigger: GAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCT...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTACTGCCCACTTCCTGGTaGTTAGAGACCATCGCCACC +
Preference number: 2 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVLPTSW*LETIAT
Trigger: GGTGGCGATGGTCTCTAAGCACCAGGAAGTGGGCAG...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATAATCAGACCACTGCCTaGAGCAGAGCTGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDNQTTA*SRAGAA
Trigger: TGCAGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATT...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAGCTGGAACAGCACCTTaGTGTGGAATCCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVAGTAP*CGIPVG
Trigger: ACCCACAGGGATTCCACATCAAGGTGCTGTTCCAGC...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTACCCAGCTCCACCATCTaGAGCTGCAGGAAGAGAACT +
Preference number: 2 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVPSSTI*SCRKRT
Trigger: AGTTCTCTTCCTGCAGCTCCAGATGGTGGAGCTGGG...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCATCTACCCTGGGAATaGGAAGCGGCAGACTATGGA +
Preference number: 2 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILHLPWE*EAADYG
Trigger: TCCATAGTCTGCCGCTTCCCATTCCCAGGGTAGATG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CAA 90 bp TCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGTTACTaGGAATGTCAGACCCGGTGGGTATCAGTCATCAGGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SLWLLGSNYQLHTGY*ECQTRWVSVIRERE
Trigger: CTCCCTCTCCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCCTACAACAAGGACTTTaGAGACAAATTCCTACCTGT +
Preference number: 2 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVLQQGL*RQIPTC
Trigger: ACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGAGCCTGTCGTGCAGATaGTGCATTCAGAGAGCAACT +
Preference number: 2 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILSLSCR*CIQRAT
Trigger: AGTTGCTCTCTGAATGCACCATCTGCACGACAGGCT...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGACTTGCCTCATTTCCTaGCCATGGTTAAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILTCLIS*PWLRKA
Trigger: TGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGT...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR TCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTATGTGCAAAGGGCTTGTaGTTGTTTCGCCCTAAAGGA +
Preference number: 2 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVCAKGL*LFRPKG
Trigger: TCCTTTAGGGCGAAACAATCACAAGCCCTTTGCACA...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp AGTAACACCTCCCAGAGCTCCCGCACCACAGGCCTGTaGGGTCCCTCTGACCGCCAGACCCACAGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SNTSQSSRTTGL*GPSDRQTHRAG
Trigger: CCCAGCCCTGTGGGTCTGGCGGTCAGAGGGACCCCACAGGCCTGTGGTGCGGGAGCTCTGGGAGGTGTTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp CCAGAGCTCCCGCACCACAGGCCTGTGGGGTCCCTCTaGCCGCCAGACCCACAGGGCTGGGAGACATTTCCA +
Preference number: 3 (lower is better)
Translates to: PELPHHRPVGSL*PPDPQGWETFP
Trigger: TGGAAATGTCTCCCAGCCCTGTGGGTCTGGCGGTCAGAGGGACCCCACAGGCCTGTGGTGCGGGAGCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp AACGCGGCTCGGCTCTCCGGGAAGCACCAGACCCCCTaGCAGAAGAGCCCAGCTCCACCATCTGGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: NAARLSGKHQTP*QKSPAPPSGAA
Trigger: TGCAGCTCCAGATGGTGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGCTTCCCGGAGAGCCGAGCCGCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp TCGTCCCATCCTCTCCTGGGTAAACCGGGCCGGGCATaGCACGGGTTAAACGCGGCTCGGCTCTCCGGGAAG +
Preference number: 3 (lower is better)
Translates to: SSHPLLGKPGRA*HGLNAARLSGK
Trigger: CTTCCCGGAGAGCCGAGCCGCGTTTAACCCGTGGCATGCCCGGCCCGGTTTACCCAGGAGAGGATGGGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp CCCTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTaGGCCCTGGAGATCCTGGTGCAGAGTCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: PLSLSAHSGMSQ*ALEILVQSPQG
Trigger: GCCCTGGGGACTCTGCACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp ACTGGCCGGTGTCCTCGGAGCACGCTGATGCTGACGTaGAGAGGGCGAGTTGCTTCCCCTAGCTTCCACCTC +
Preference number: 3 (lower is better)
Translates to: TGRCPRSTLMLT*RGRVASPSFHL
Trigger: GAGGTGGAAGCTAGGGGAAGCAACTCGCCCTCTCCACGTCAGCATCAGCGTGCTCCGAGGACACCGGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp CTGAGTGGGGCCTCAGGAAACAGGTCATGCACCTCCTaGTACCCCTGCTGCTCTGGGATGCCACTGCCCACT +
Preference number: 3 (lower is better)
Translates to: LSGASGNRSCTS*YPCCSGMPLPT
Trigger: AGTGGGCAGTGGCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp GAAGAGGTAGAGTTCCGCACGAGACCACGGCCTCACTaGTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: EEVEFRTRPRPH*FCCGSQGRKSQ
Trigger: CTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCTCGTGCGGAACTCTACCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp GGACGAGGATGGGGCAGATGGCAGCTAAGTCCACACTaGAGCCAGAGGTCTTTGAGGGAGCTCGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: GRGWGRWQLSPH*SQRSLRELEAL
Trigger: GAGAGCCTCGAGCTCCCTCAAAGACCTCTGGCTGCAGTGTGGACTTAGCTGCCATCTGCCCCATCCTCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp TGGCGACAAGCGCTGGGACTCCAGCCAAAGCGGGAGTaGATGCTTCTTCCCCTCCCAGAGCCCTGTGGTTTT +
Preference number: 3 (lower is better)
Translates to: WRQALGLQPKRE*MLLPLPEPCGF
Trigger: AAAACCACAGGGCTCTGGGAGGGGAAGAAGCATGCACTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp TACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTaGCGACAAGCGCTGGGACTCCAGCCAAAGCGGGAG +
Preference number: 3 (lower is better)
Translates to: YGCCQDYRQGGG*RQALGLQPKRE
Trigger: CTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp AAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCACTaGGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: KSLEEVVQSPCH*APIRGCLSGPW
Trigger: CCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp CTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTaGCCTGGGCAAGTTCCTGAACGCCCATGGAGACGG +
Preference number: 3 (lower is better)
Translates to: LPPFPRVHIHSA*PGQVPERPWRR
Trigger: CCGTCTCCATGGGCGTTCAGGAACTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp CGCCACCAGCAGAAGATCCTAGGGCAGCCTAGAATCTaGAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCC +
Preference number: 3 (lower is better)
Translates to: RHQQKILGQPRI*RACPSDHRGVS
Trigger: GGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTGCCCTAGGATCTTCTGCTGGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp AAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGCTaGGACTCCAGCCAAAGCGGGAGTGCATGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: KTTGKEEGGDKR*DSSQSGSACFF
Trigger: GAAGAAGCATGCACTCCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp AGTTCACATCCACAGTGCCTGACCTGGGCAAGTTCCTaGACGCCCATGGAGACGGTGATGGGGAGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: SSHPQCLTWASS*TPMETVMGRRR
Trigger: CCTCCTTCTCCCCATCACCGTCTCCATGGGCGTTCAGGAACTTGCCCAGGTCAGGCACTGTGGATGTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp GTAGAGTTCCGCACGAGACCACGGCCTCACTGCTTCTaGTGTGGGAGCCAGGGTAGGAAGTCCCAGAACAAT +
Preference number: 3 (lower is better)
Translates to: VEFRTRPRPHCF*CGSQGRKSQNN
Trigger: ATTGTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCTCGTGCGGAACTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp AGAGACCCACTCACGGCTGCTCACAGGATGGCCTCCTaGTCTGAGGGATTCTTCAAGGATGAAGAGGCCGCA +
Preference number: 3 (lower is better)
Translates to: RDPLTAAHRMAS*SEGFFKDEEAA
Trigger: TGCGGCCTCTTCATCCTTGAAGAATCCCTCAGAGCAGGAGGCCATCCTGTGAGCAGCCGTGAGTGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp TCCCTAGAGCAGGGGCAACCTCCCCCTCTAACAAGGTaGTCTTTCCCATTCCCACTTAGACTGTGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: SLEQGQPPPLTR*SFPFPLRLWAA
Trigger: GGCTGCCCACAGTCTAAGTGGGAATGGGAAAGACCACCTTGTTAGAGGGGGAGGTTGCCCCTGCTCTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp CCTGGTGCAGAGTCCCCAGGGCAGCTCAGAGAAGAGTaGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGA +
Preference number: 3 (lower is better)
Translates to: PGAESPGQLREE*TSLSCRWCIQR
Trigger: TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGGACTCTGCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp TCTGGCACATTTGTGTGCTGTGAGGCATGGCTGTGCTaGGTGGGGCCTCAGGAAACAGGTCATGCACCTCCT +
Preference number: 3 (lower is better)
Translates to: SGTFVCCEAWLC*VGPQETGHAPP
Trigger: AGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTCACAGCACACAAATGTGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp AGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTaGTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGG +
Preference number: 3 (lower is better)
Translates to: SLPRRSCPWKEK*FTLGGRKIGAR
Trigger: CCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp AGAGGGAGGGGAAATGCCAGGACACGTACATACGGATaGTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGA +
Preference number: 3 (lower is better)
Translates to: RGRGNARTRTYG*CQDYRQGGGWR
Trigger: TCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTCCCCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp AGGACCTGCCTGAGCCAGGCAGCAAGCAAGCTGGGATaGATGGCGCCCACTTCCTGCCTGTTTAAAACAAGT +
Preference number: 3 (lower is better)
Translates to: RTCLSQAASKLG*MAPTSCLFKTS
Trigger: ACTTGTTTTAAACAGGCAGGAAGTGGGCGCCATCCATCCCAGCTTGCTTGCTGCCTGGCTCAGGCAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp CTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTaGCCTTGGAAGGAAAAGTGCTTCACTTTAGGTGGA +
Preference number: 3 (lower is better)
Translates to: LISGLLSLPRRS*PWKEKCFTLGG
Trigger: TCCACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp GCACATTTGTGTGCTGTGAGGCATGGCTGTGCTGAGTaGGGCCTCAGGAAACAGGTCATGCACCTCCTGATA +
Preference number: 3 (lower is better)
Translates to: AHLCAVRHGCAE*GLRKQVMHLLI
Trigger: TATCAGGAGGTGCATGACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTCACAGCACACAAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp CTAACAAGGTGGTCTTTCCCATTCCCACTTAGACTGTaGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCC +
Preference number: 3 (lower is better)
Translates to: LTRWSFPFPLRL*AASLEHSPGMS
Trigger: GGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAATGGGAAAGACCACCTTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp TCTGTGGTTCTGAAGCTAGAGCAGGCCCAAAGTCCCTaGAGGAGGTTGTTCAAAGCCCTTGTCACTGAGCGC +
Preference number: 3 (lower is better)
Translates to: SVVLKLEQAQSP*RRLFKALVTER
Trigger: GCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAGAACCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp CCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTaGAGATGGTGCATTCAGAGAGCAACTCCTACAACA +
Preference number: 3 (lower is better)
Translates to: PGQLREEWTSLS*RWCIQRATPTT
Trigger: TGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp GTATCAGGCAGGGCAGAGAAACCCTGCCTGCTGACTTaGCTCATTTCCTGCCCATGGTTAAGGAAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VSGRAEKPCLLT*LISCPWLRKAE
Trigger: TTCTGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCTGCCTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp CGGTGGGTATCAGTCATCAGGGAGAGGGAGGGGAAATaGCAGGACACGTACATACGGATGCTGTCAAGACTA +
Preference number: 3 (lower is better)
Translates to: RWVSVIREREGK*QDTYIRMLSRL
Trigger: TAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTCCCCTCCCTCTCCCTGATGACTGATACCCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp GAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTaGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTA +
Preference number: 3 (lower is better)
Translates to: ELPLEGKVLHFR*KEDRGEEGVNL
Trigger: TAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTaGCTGACAAAGGGGAACGGAGCAGGCCTGTGCCCC +
Preference number: 3 (lower is better)
Translates to: NKMAVIFFLLGH*LTKGNGAGLCP
Trigger: GGGGCACAGGCCTGCTCCGTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CAA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCCTACAACAAGGACTTaGGAGACAAATTCCTACCTG +
Preference number: 3 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGPTTRT*ETNSYL
Trigger: CAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp GAAACTCATCCTCTGCAGGAGAGAGAAGCAAGGGTCTaGAGCGCGGTCACATACTCTAAGGTATCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: ETHPLQEREARV*SAVTYSKVSSR
Trigger: CCTGGAAGATACCTTAGAGTATGTGACCGCGCTCCAGACCCTTGCTTCTCTCTCCTGCAGAGGATGAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTATGCAGCCAGAGGTCTTaGAGGGAGCTCGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVCSQRS*RELEAL
Trigger: GAGAGCCTCGAGCTCCCTCAAAGACCTCTGGCTGCA...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CAA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCTTCCTTCTTGGCCATaGGCTGACAAAGGGGAACGG +
Preference number: 3 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILLPSWP*ADKGER
Trigger: CCGTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR TCA 72 bp AGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTaGTTGTTTCGCCCTAAAGGAAGCCCTGGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: RELSWVLCAKGL*LFRPKGSPGKR
Trigger: CCTCTTCCCAGGGCTTCCTTTAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp CAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATaGTGCATTCAGAGAGCAACTCCTACAACAAGGACT +
Preference number: 3 (lower is better)
Translates to: QLREEWTSLSCR*CIQRATPTTRT
Trigger: AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp CAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTaGGTATCAGTCATCAGGGAGAGGGAGGGGAAATGC +
Preference number: 3 (lower is better)
Translates to: QLHTGYLECQTR*VSVIREREGKC
Trigger: GCATTTCCCCTCCCTCTCCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR-3UTR CAA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTACCAGGACACTCCTCTaGCCACCAAAACTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPTRTLL*PPKLRG
Trigger: GCCCCTGAGTTTTGGTGGCAAGAGGAGTGTCCTGGT...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp GCAGAGAAACCCTGCCTGCTGACTTGCCTCATTTCCTaGCCATGGTTAAGGAAGGCAGAACCTAGACAAAAT +
Preference number: 3 (lower is better)
Translates to: AEKPCLLTCLIS*PWLRKAEPRQN
Trigger: ATTTTGTCTAGGTTCTGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR GCA 72 bp TGTTTAAAACAAGTATCAGGCAGGGCAGAGAAACCCTaGCTGCTGACTTGCCTCATTTCCTGCCCATGGTTA +
Preference number: 3 (lower is better)
Translates to: CLKQVSGRAEKP*LLTCLISCPWL
Trigger: TAACCATGGGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCTGCCTGATACTTGTTTTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp GGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTaGAGACAAATTCCTACCTGTCCCACTAAGGACGAG +
Preference number: 3 (lower is better)
Translates to: GAFREQLLQQGL*RQIPTCPTKDE
Trigger: CTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp TATTGGGATCAAACTACCAGTTACATACTGGTTACTTaGAATGTCAGACCCGGTGGGTATCAGTCATCAGGG +
Preference number: 3 (lower is better)
Translates to: YWDQTTSYILVT*NVRPGGYQSSG
Trigger: CCCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CCA 72 bp GCTATGGCTATTGGGATCAAACTACCAGTTACATACTaGTTACTTGGAATGTCAGACCCGGTGGGTATCAGT +
Preference number: 3 (lower is better)
Translates to: AMAIGIKLPVTY*LLGMSDPVGIS
Trigger: ACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTGCAGCGTGCGCCTCCTaGTGGCCACCCAGCGGACCG +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGAACAS*WPPSGP
Trigger: CGGTCCGCTGGGTGGCCAGCAGGAGGCGCACGCTGC...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCGCCAGGTGCAGCCGGTaGGCCACGCAGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPARCSR*ATQWTG
Trigger: GCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGC...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTCCTGTGGGGTCCCTCTaGCCGCCAGACCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGPVGSL*PPDPQG
Trigger: GCCCTGTGGGTCTGGCGGTCAGAGGGACCCCACAGG...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTGCTCCGGAACCGGGCTaGCCAGATGGGGTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGAPEPG*PDGVPR
Trigger: GCGAGGGACCCCATCTGGGCAGCCCGGTTCCGGAGC...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCCGGTGGGCCACGCAGTaGACAGGCAGCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GPQETGHAPPDTPAALGCRWATQ*TGSSCG
Trigger: CCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCG...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACGGAGGGCAGGATGGGTaGCTTCTGGGTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHGGQDG*LLGPGL
Trigger: GAGCCCAGGACCCAGAAGCCACCCATCCTGCCCTCC...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGTCTGGCCCTGGACGCTaGCAAGCCATGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPWEWEAADYGERAHPQGSGPGR*QAMALA
Trigger: GGCCAGAGCCATGGCTTGGCAGCGTCCAGGGCCAGA...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTATCCCCACGCAGGCCTaGTCGGAGGCGTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IILLLISGLLSLPRRSCPIPTQA*SEASVE
Trigger: CTCCACCGACGCCTCCGAGCAGGCCTGCGTGGGGAT...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACCTCACGAGCAGCGCGTaGAGCGTGCGCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNLTSSA*SVRLLL
Trigger: CAGCAGGAGGCGCACGCTGCACGCGCTGCTCGTGAG...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACAGAGCGGCTCCGGGCTaGCCAGAACATCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHRAAPG*PEHLQV
Trigger: CACCTGGAGATGTTCTGGCCAGCCCGGAGCCGCTCT...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACCTCCACGGGAGAGCCTaGAAGCAACGCGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHLHGRA*KQRGVC
Trigger: GCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAG...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTGCTCGGAGGCGTCGGTaGAGCTGTCCAGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: IILLLISGLLSLPRRSCPARRRR*SCPAAR
Trigger: GCGTGCTGCTGGACAGCTCCACCGACGCCTCCGAGC...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCCCTCTGGAGGTGCCTaGCCAGGGCGGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGPSGGA*PGRASS
Trigger: TGAGCTGGCCCGCCCTGGCCAGGCACCTCCAGAGGG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGGTCAGGTACCAGTGCTaGATGGCGGGCTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LPWEWEAADYGERAHPQGVRYQC*MAGWGS
Trigger: CGACCCCCAGCCCGCCATCCAGCACTGGTACCTGAC...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACCGTCCCATCCTCTCCTaGGTAAACCGGGCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHRPILS*VNRAGH
Trigger: ATGCCCGGCCCGGTTTACCCAGGAGAGGATGGGACG...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCGCCCATTTGGGTCCTTaGTCCAGGGTGCAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPAHLGP*SRVQPS
Trigger: GGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGC...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTATCCCTTTGGCCCGGTaGCCAATCTGGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGIPLAR*PIWPPA
Trigger: GGCTGGGGGCCAGATTGGGCACCGGGCCAAAGGGAT...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCTGAGCCTGGCGCTTaGAGGGGAGCGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPEPGA*RGAGWH
Trigger: GTGCCAGCCCGCTCCCCTGCAAGCGCCAGGCTCAGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCGCCTCTGCCACCCTCTaGAGGTGCCTGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCASATL*RCLARA
Trigger: CGCCCTGGCCAGGCACCTCCAGAGGGTGGCAGAGGC...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACCTCTCCCTATCCGCCTaGAACCGCTGTTCCGCTACC +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHLSLSA*NRCSAT
Trigger: GGTAGCGGAACAGCGGTTCCAGGCGGATAGGGAGAG...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTTGCTGGATGGCGGGCTaGGGGTCGTACTCCGTGACG +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGCWMAG*GSYSVT
Trigger: CGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCA...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTTGCAGGGGAGCGGGCTaGCACCTGGGCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGCRGAG*HLGTGV
Trigger: TACACCTGTGCCCAGGTGCCAGCCCGCTCCCCTGCA...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACGTGGCTTCTGGGTCCTaGGCTCCTCCACATAGAGGG +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHVASGS*APPHRG
Trigger: CCCTCTATGTGGAGGAGCCCAGGACCCAGAAGCCAC...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCTCCAGGTGGGTCTCTaGTGCTCCGGAACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGLQVGL*CSGTGL
Trigger: CAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCAGACCACCACGGCCATaGGCTTGCTTAGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPRPPRP*ACLAGG
Trigger: TCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCT...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACGCCCTCGTCCGAACTTaGGGAACAGCTCAGGATTGG +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHALVRT*GTAQDW
Trigger: CCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGC...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACTCTTCACCAGATCGATaGTCCCGCAGGCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHSSPDR*SRRRPP
Trigger: TGGTGGACGCCTGCGGGAGCATCGATCTGGTGAAGA...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACCTGCCCACTTCCTGGTaGTTAGAGACCATCGCCACC +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHLPTSW*LETIAT
Trigger: GGTGGCGATGGTCTCTAAGCACCAGGAAGTGGGCAG...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTCCCTGGAGATCCTGGTaGAGAGTCCCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGPWRSW*RVPRAA
Trigger: AGCTGCCCTGGGGACTCTGCACCAGGATCTCCAGGG...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCGCACAGCACAGGACCTaGCTGAGCCAGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GPQETGHAPPDTPAALGCAQHRT*LSQAAS
Trigger: GCTTGCTGCCTGGCTCAGGCAGGTCCTGTGCTGTGC...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCAGACCCACTCACGGCTaGTCACAGGATGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPRPTHG*SQDGLL
Trigger: CAGGAGGCCATCCTGTGAGCAGCCGTGAGTGGGTCT...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACGCCAAGCCATGGCTCTaGCCCTCGTCCGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNAKPWL*PSSELA
Trigger: CGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGC...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGGCCTCCTGGCTGGTGTaGGGATACAGGAGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: LPWEWEAADYGERAHPQGASWLV*GYRSLS
Trigger: CGAGAGACTCCTGTATCCCCACACCAGCCAGGAGGC...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCTGGGGCAATCTGCAGTaGAGAGCGGCTCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCWGNLQ*RAAPGW
Trigger: CCAGCCCGGAGCCGCTCTTCACTGCAGATTGCCCCA...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTGATCCTTCAGGCGGATaGTCTCCTGCTCCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGDPSGG*SPAPEA
Trigger: CGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATC...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCTTGGGCCCTGCCTGGTaGCGGAGGCTCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVLGPAW*RRLSSA
Trigger: GGCACTGGAGAGCCTCCGTCACCAGGCAGGGCCCAA...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACAGGTCATGCACCTCCTaGTACCCCTGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNRSCTS*YPCCSG
Trigger: CCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCT...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGATCCACCACAGCCAGGTaGAGCCGGTGGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRSTTAR*SRWATQ
Trigger: CTGCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGA...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGCAGCGCGTGCAGCGTaGGCCTCCTGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLAARAA*ASCWPP
Trigger: GGGTGGCCAGCAGGAGGCGCACGCTGCACGCGCTGC...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCACCCACAGGGGCCTaGAGCACAGCACAGGACCTG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPPTGA*STAQDL
Trigger: CAGGTCCTGTGCTGTGCTGCAGGCCCCTGTGGGTGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCACCGGGCTGCCCAGATaGGGTCCCTCGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSTGLPR*GPSLPR
Trigger: CCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCGGT...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCTCCTCCCAGAGGCCCTaGGGGGTAGAATATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPQETGHAPPDTPAALGCSSQRP*GVEYGA
Trigger: TGCCCCATATTCTACCCCCCAGGGCCTCTGGGAGGA...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGGCGTGCGCCTCCTGCTaGCCACCCAGCGGACCGCAT +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVACASC*PPSGPH
Trigger: ATGCGGTCCGCTGGGTGGCCAGCAGGAGGCGCACGC...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCCTGGAGGGCAGGATaGGTGGCTTCTGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPWRAG*VASGSW
Trigger: CCAGGACCCAGAAGCCACCCATCCTGCCCTCCAGGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCACCTCCGCTGCTTCCCTaGAGGGCAGGATGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAPPLLP*RAGWVA
Trigger: AGCCACCCATCCTGCCCTCCAGGGAAGCAGCGGAGG...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCGGGGGCCTCCTGGCTaGTGTGGGGATACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCRGPPG*CGDTGV
Trigger: GACTCCTGTATCCCCACACCAGCCAGGAGGCCCCCG...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTAGCACAGGACCTGCCTaGGCCAGGCAGCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGASTGPA*ARQQAS
Trigger: GCTTGCTTGCTGCCTGGCTCAGGCAGGTCCTGTGCT...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAAGCACACACCTGTATaGGGGACCCGCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFKHTPV*GTRPST
Trigger: TGTGGAGGGGCGGGTCCCTCATACAGGTGTGTGCTT...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCAAGCAACGCGGAGTCTaGAGCCGAGGCCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGKQRGV*SRGLCV
Trigger: GACACACAGGCCTCGGCTGCAGACTCCGCGTTGCTT...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTAGGCGGATGATCTCCTaGTCCAGAGGCGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGARRMIS*SRGAAP
Trigger: AGGTGCGGCGCCTCTGGAGCAGGAGATCATCCGCCT...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACGTTTGTCCAAGCAGATaGCGTGGAGCCGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNVCPSR*RGAAHP
Trigger: AGGATGGGCGGCTCCACGGCATCTGCTTGGACAAAC...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCGAGGTCAGGTACCAGTaGTGGATGGCGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVEVRYQ*WMAGWG
Trigger: CCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTC...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTCTTCAGAACCTCCGCTaGTTCCCTGGAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: IILLLISGLLSLPRRSCPLQNLR*FPGGQD
Trigger: ATCCTGCCCTCCAGGGAAGCAGCGGAGGTTCTGAAG...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGCGGCCTCACTGCTTCTaGTGTGGGAGCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKRPHCF*CGSQGR
Trigger: CCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCG...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCAGCAGAGCTGGGGCTaGATCCCAAGCCTCCCAACT +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFQQSWG*IPSLPT
Trigger: AGTTGGGAGGCTTGGGATGCAGCCCCAGCTCTGCTG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCGGGTACCAGGGTACCTaGGGTACCAGGGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVGYQGT*GTREGL
Trigger: GAGCCCCTCCCTGGTACCGCAGGTACCCTGGTACCC...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACACCATGACCTCTGAATaGAACGGGGCCTGTATGTCC +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHTMTSE*NGACMS
Trigger: GGACATACAGGCCCCGTTCCATTCAGAGGTCATGGT...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACTGTCTCAGTGGGCCCTaGAGATCCTGGTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNCLSGP*RSWCRV
Trigger: GACTCTGCACCAGGATCTCCAGGGCCCACTGAGACA...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCTCGGGGATGTCTCAGTaGGCCCTGGAGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGSGMSQ*ALEILV
Trigger: CACCAGGATCTCCAGGGCCCACTGAGACATCCCCGA...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCGGCTGCTCACAGGATaGCCTCCTGCTCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGRLLTG*PPALRD
Trigger: ATCCCTCAGAGCAGGAGGCCATCCTGTGAGCAGCCG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTAAACAGCATTCTCAGTaGCCCCGCTGCACAGGGACC +
Preference number: 4 (lower is better)
Translates to: IILLLISGLLSLPRRSCPKQHSQ*PRCTGT
Trigger: GGTCCCTGTGCAGCGGGGCCACTGAGAATGCTGTTT...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCGGTGGCGACAAGCGCTaGGACTCCAGCCAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVGGDKR*DSSQSG
Trigger: CCCGCTTTGGCTGGAGTCCCAGCGCTTGTCGCCACC...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTAGGCAAGGAGGAGGGTaGCGACAAGCGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGARQGGG*RQALGL
Trigger: GAGTCCCAGCGCTTGTCGCCACCCTCCTCCTTGCCT...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACGAATGTCAGACCCGGTaGGTATCAGTCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHECQTR*VSVIRE
Trigger: CTCCCTGATGACTGATACCCACCGGGTCTGACATTC...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACGAACTGCCCAAACCATaGCCTCTGAATGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNELPKP*PLNGTG
Trigger: CCCCGTTCCATTCAGAGGTCATGGTTTGGGCAGTTC...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTGGAAGTGGCAGAACTTaGCAAAGTGGAAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGGSGRT*QSGSRA
Trigger: TGCGCGGCTTCCACTTTGTCAAGTTCTGCCACTTCC...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGCTGAAACGCCGGCCTaGGGAGGTCAGGTACCAGTG +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSAETPA*GGQVPV
Trigger: CACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAGC...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGGTGTAGACATGGCTaGAACGCCGGCCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNRCRHG*NAGLRR
Trigger: CCTCCTCAGGCCGGCGTTTCAGCCATGTCTACACCT...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTGAGGCATGGCTGTGCTaGGTGGGGCCTCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAEAWLC*VGPQET
Trigger: TGTTTCCTGAGGCCCCACTCAGCACAGCCATGCCTC...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACGCAGCCAGAGGTCTTTaGGGGAGCTCGAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNAARGL*GSSRLS
Trigger: TGAGAGCCTCGAGCTCCCTCAAAGACCTCTGGCTGC...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCACCTGGGCAAGTTCCTaGACGCCCATGGAGACGGTG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCTWASS*TPMETV
Trigger: CACCGTCTCCATGGGCGTTCAGGAACTTGCCCAGGT...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCTCCGACAGCCCCTCTaGAGAAGGGTCCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGLRQPL*RRVLNA
Trigger: TGCATTCAGGACCCTTCTGCAGAGGGGCTGTCGGAG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGACGGAGGCTCTCCAGTaGCACGTAGGCGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLTEALQ*HVGAAQ
Trigger: CTGGGCCGCGCCTACGTGGCACTGGAGAGCCTCCGT...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCTGTGGGGGTCGGTCTaGGTCAAACCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNLWGSV*VKPLLE
Trigger: CTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCAAGCACCAGACCCCCTaGCAGAAGAGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCKHQTP*QKSPAP
Trigger: TGGAGCTGGGCTCTTCTGGCAGGGGGTCTGGTGCTT...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCAAACCGGGCCGGGCATaGCACGGGTTAAACGCGGCT +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSKPGRA*HGLNAA
Trigger: AGCCGCGTTTAACCCGTGGCATGCCCGGCCCGGTTT...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACCACTTGGATCTCTGCTaGCACTTCATGGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHHLDLC*HFMERE
Trigger: TTCCCTCTCCATGAAGTGGCAGCAGAGATCCAAGTG...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCAACGGAGCAGGCCTGTaGCCCTTGAGAAATCGGGTA +
Preference number: 4 (lower is better)
Translates to: GPQETGHAPPDTPAALGCNGAGL*PLRNRV
Trigger: TACCCGATTTCTCAAGGGGCACAGGCCTGCTCCGTT...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGACGCTGCCAAGCCATaGCTCTGGCCCTCGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRDAAKP*LWPSSE
Trigger: TTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGTC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACCCACTTTGGCCCATTTaGGTCCTTGATCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNPLWPI*VLDPGC
Trigger: GCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGG...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCGCTTCAGCATCCCTTTaGCCCGGTGCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSASASL*PGAQSG
Trigger: GCCAGATTGGGCACCGGGCCAAAGGGATGCTGAAGC...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACAGCCTGTCGTGCAGATaGTGCATTCAGAGAGCAACT +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHSLSCR*CIQRAT
Trigger: AGTTGCTCTCTGAATGCACCATCTGCACGACAGGCT...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGGGGCCCTGGAGATCCTaGTGCAGAGTCCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVGPWRS*CRVPRA
Trigger: TGCCCTGGGGACTCTGCACCAGGATCTCCAGGGCCC...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAATAAGCGCGCTGAGCTaGGACTTGCGTCGCACCGAG +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRISALS*DLRRTE
Trigger: CTCGGTGCGACGCAAGTCTCAGCTCAGCGCGCTTAT...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCTCGCTGCCAAGGCATTaGCACAGAACATGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGSLPRH*HRTCGP
Trigger: AGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGA...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCATGTACTTGATGAACTaGGTGCACGCCGTGCGATTG +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPMYLMN*VHAVRL
Trigger: CAATCGCACGGCGTGCACTCAGTTCATCAAGTACAT...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCAGTGGAAGCCGCGCATaGGCTTCAGCATCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCSGSRA*ASASLW
Trigger: CCAAAGGGATGCTGAAGCTCATGCGCGGCTTCCACT...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCAAAGCCCTTGTCACTaGGCGCCCATTCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNQSPCH*APIRGC
Trigger: ACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCAGAGCTCCTTCTGTTaGTGGCTCAGCAGCACCCAT +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFQSSFC*WLSSTH
Trigger: ATGGGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGTTGGTCCCAGTGGTaGCACCAGCTTGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFSWSQW*HQLVGT
Trigger: GGTTCCAACAAGCTGGTGGCACCACTGGGACCAACT...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGTGCACGCCGTGCGATTaGGGTACTTGCCTAATATCA +
Preference number: 4 (lower is better)
Translates to: LPWEWEAADYGERAHPQGCTPCD*GTCLIS
Trigger: TGATATTAGGCAAGTACCGCAATCGCACGGCGTGCA...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTGCCTCTGGGGGCTCTTaGAGCCAGGCCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTASGGS*SQASCP
Trigger: GGGACAGCTGGCCTGGCTGCAAGAGCCCCCAGAGGC...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTAGACCACGGCCTCACTaGTTCTGCTGTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGARPRPH*FCCGSQ
Trigger: CTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGAATCAGACCACTGCCTaGAGCAGAGCTGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKNQTTA*SRAGAA
Trigger: TGCAGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATT...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGCAGCCAAAGCGGGAGTaGATGCTTCTTCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKQPKRE*MLLPLP
Trigger: TGGGAGGGGAAGAAGCATGCACTCCCGCTTTGGCTG...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCGTCGCTGGAGATCTCTaGAACGAGGGCAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSVAGDL*NEGSVR
Trigger: CCTCACACTGCCCTCGTTCCAGAGATCTCCAGCGAC...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTGGAGGTGCTGGGCAATaGTTTTCAGGCCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAGGAGQ*FSGPAT
Trigger: AGTGGCTGGGCCTGAAAACCATTGCCCAGCACCTCC...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGGGGAAGCGGCAGTGCTaGGCCAGGGCGTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVGKRQC*ARAFLQ
Trigger: CTGCAAAAACGCCCTGGCCCAGCACTGCCGCTTCCC...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCAGCAAGAGGTGGAGATaGGCACACAGACCACCACGG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCSKRWR*AHRPPR
Trigger: CCGTGGTGGTCTGTGTGCCCATCTCCACCTCTTGCT...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCACCACTGCCCACTTCCTaGTGCTTAGAGACCATCGCC +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAPLPTS*CLETIA
Trigger: GGCGATGGTCTCTAAGCACCAGGAAGTGGGCAGTGG...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTCAGCTCAGAGAAGAGTaGACTAGCCTGTCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGQLREE*TSLSCR
Trigger: TCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTG...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAAGGCAGCAAGCAAGCTaGGATGGATGGCGCCCACTT +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKARQQAS*DGWRPL
Trigger: AAGTGGGCGCCATCCATCCCAGCTTGCTTGCTGCCT...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CAA 72 bp AGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTaGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPKVPGGGCSKP*SLSAHSGMSQW
Trigger: CCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CAA 72 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTaGTTCAAAGCCCTTGTCACTGAGCGCCCATTCGGG +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRR*FKALVTERPFG
Trigger: CCCGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGCTCCATGTTGGCCATaGGGTCGCTGGAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSAPCWP*GRWRSL
Trigger: CAGAGATCTCCAGCGACCTCATGGCCAACATGGAGC...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCCTGCAGCACAGCACAATACCTGGCCAGGTTaGGAATGTCATCATTCCCAA +
Preference number: 4 (lower is better)
Translates to: EAADYGERAHPQGPAAQHNTWPG*ECHHSQ
Trigger: TTGGGAATGATGACATTCTCAACCTGGCCAGGTATT...GTGCTGTGCTGCAGGCCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGGGGGTCGTACTCCGTaGCGGCCACGCCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILGGRTP*RPRRSQ
Trigger: CTGTGAACGGCGTGGCCGTCACGGAGTACGACCCCC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCAGAAACCCTGCCTGCTaGCTTGCCTCATTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCRNPAC*LASFPA
Trigger: GGCAGGAAATGAGGCAAGTCAGCAGGCAGGGTTTCT...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTTTCTTGGCCATTGGCTaGCAAAGGGGAACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAFLAIG*QRGTEQ
Trigger: CTGCTCCGTTCCCCTTTGTCAGCCAATGGCCAAGAA...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AGACCACGGCCTCACTGCTTCTGCTGTGGGAGCCAGGGTAGGAAGTCCCAGAACCACGGGGGTCCTGAATaGGGAAGTTCAGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: RPRPHCFCCGSQGRKSQNHGGPE*GSSGIR
Trigger: TCTTATTCCTGAACTTCCTCATTCAGGACCCCCGTG...GTTCTGGGACTTCCTACCCTGGCTCCCACAGCAGAAGCAGTGAGGCCGTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAGAATATGGGGCAATCTaGAGTGAAGAGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAEYGAI*SEERLR
Trigger: CCGGAGCCGCTCTTCACTGCAGATTGCCCCATATTC...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTCACAAATGCTGGAACTaGAGCAGGAGGCACGGGCCT +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAHKCWN*SRRHGP
Trigger: AGGCCCGTGCCTCCTGCTGCAGTTCCAGCATTTGTG...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCGTGCTTTGGAGGAGCTaGAGGATCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPVLWRS*RIFSKS
Trigger: TGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCAC...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTCCACAAGGCCTCCTCTaGAGCTCAACATGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAPQGLL*SSTWLS
Trigger: GCTCAGCCATGTTGAGCTGCAGAGGAGGCCTTGTGG...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCAGGACACTCCTCTTaGCACCAAAACTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPGHSS*HQNSGA
Trigger: AGCCCCTGAGTTTTGGTGGCAAGAGGAGTGTCCTGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGACAAAGCGGGAGTGCATaGTTCTTCCCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRQSGSA*FFPSQS
Trigger: GCTCTGGGAGGGGAAGAAGCATGCACTCCCGCTTTG...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCGTGCCACCAGCTTGTTaGAACCACAGAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFVPPAC*NHRAPS
Trigger: AGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCAC...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTAGGCTCCTCTGGCCCTaGACGCTGCCAAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTRLLWP*TLPSHG
Trigger: GCCATGGCTTGGCAGCGTCCAGGGCCAGAGGAGCCT...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCACTGTCCACTCTCCCTaGTGGGACCTTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVTVHSP*WDLAPP
Trigger: TGGAGGTGCAAGGTCCCACCAGGGAGAGTGGACAGT...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCCAGGGCAGAAACGATaGTCTCGAAGTACCCATCTG +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFPGQKR*SRSTHL
Trigger: CAGATGGGTACTTCGAGACCATCGTTTCTGCCCTGG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCGCGTCAAACCTCTGCTaGAGGTACTCAATCCCCGTC +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCASNLC*RYSIPV
Trigger: GACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGC...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCACTTGGCCAGGCCATaGTGTCAAACACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGHLARP*CQTPPC
Trigger: ACATGGAGGTGTTTGACACCATGGCCTGGCCAAGTG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGTACCAGTGCTGGATaGCGGGCTGGGGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLGTSAG*RAGGRT
Trigger: AGTACGACCCCCAGCCCGCCATCCAGCACTGGTACC...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCATCTACCCTGGGAATaGGAAGCGGCAGACTATGGA +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFHLPWE*EAADYG
Trigger: TCCATAGTCTGCCGCTTCCCATTCCCAGGGTAGATG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCAGAGAAGCAAGGGTCTaGAGCGCGGTCACATACTCT +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGREARV*SAVTYS
Trigger: AGAGTATGTGACCGCGCTCCAGACCCTTGCTTCTCT...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGGAACGAGGGCAGTGTaGGGGGTGTCTTCCTTGATT +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRGTRAV*GVSSLI
Trigger: AATCAAGGAAGACACCCCTCACACTGCCCTCGTTCC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAAGAGAGGGGCCAGAGTaGTGTAGGACTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAREGPE*CRTLSP
Trigger: AGGTGAAAGAGTCCTACATCACTCTGGCCCCTCTCT...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGCAGCTCAACATGGCTaGGCCATCCGTCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILAAQHG*AIRPQP
Trigger: GGGCTGGGGACGGATGGCTCAGCCATGTTGAGCTGC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCACATTTGTGTGCTGTaGGGCATGGCTGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCHICVL*GMAVLS
Trigger: ACTCAGCACAGCCATGCCTCACAGCACACAAATGTG...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCGGGATTCTTCAAGGATaGAGAGGCCGCAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSGILQG*RGRRKH
Trigger: ATGCTTCCTGCGGCCTCTTCATCCTTGAAGAATCCC...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAGGAACAGCTCAGGATTaGCAACAGTTGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAGTAQD*QQLVPV
Trigger: CACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCC...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCACCACGACTTCTGGATaGACCGGGGCTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSTTTSG*TGASEV
Trigger: AACTTCTGAAGCCCCGGTCCATCCAGAAGTCGTGGT...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACTTGACACAGAACATGTaGGCCTTGCTCTTCGCGTGG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNLTQNM*ALLFAW
Trigger: CCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAA...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCCAGAACATCTCCAGGTaGGTCTCTGATGCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSQNISR*VSDAPE
Trigger: TTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTG...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCATCTTCTTGTTCCCTaGAGGACGACCTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNHLLVP*RTTFPP
Trigger: TGGGGGAAAGGTCGTCCTCCAGGGAACAAGAAGATG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACTGCGGGATGACCTCCTaGAACTTTTCCACAAGGCCT +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNCGMTS*NFSTRP
Trigger: AGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCA...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCATGTTCTTCAGCTGTaGGGGTCGGTCTGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNHVLQL*GSVCVK
Trigger: TTTGACGCAGACCGACCCCCACAGCTGAAGAACATG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGATCCCGGGGGCCTCCTaGCTGGTGTGGGGATACAGG +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILIPGAS*LVWGYR
Trigger: CCTGTATCCCCACACCAGCCAGGAGGCCCCCGGGAT...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGCATGGCTGTGCTGAGTaGGGCCTCAGGAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVHGCAE*GLRKQV
Trigger: GACCTGTTTCCTGAGGCCCCACTCAGCACAGCCATG...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTGCCTGCAGCAGAGCTaGGGCTGCATCCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTCLQQS*GCIPSL
Trigger: GAGGCTTGGGATGCAGCCCCAGCTCTGCTGCAGGCA...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCCAGGCCCAAAGTCCCTaGAGGAGGTTGTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVQAQSP*RRLFKA
Trigger: GGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTG...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTGTGCTTCACTTTAGGTaGAAGGAAGATCGGGGCGAG +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAVLHFR*KEDRGE
Trigger: CTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCAC...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGCAAGCAAGCTGGGATaGATGGCGCCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLASKLG*MAPTSC
Trigger: GCAGGAAGTGGGCGCCATCCATCCCAGCTTGCTTGC...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGGGAAGCGGCAGACTATaGAGAAAGGGCCCACCCACA +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVGSGRL*RKGPPT
Trigger: TGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCC...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGCCAGACCCACAGGGCTaGGAGACATTTCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVPDPQG*ETFPQV
Trigger: GACCTGTGGAAATGTCTCCCAGCCCTGTGGGTCTGG...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTACGCACCACAGGCCTGTaGGGTCCCTCTGACCGCCAG +
Preference number: 4 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVRTTGL*GPSDRQ
Trigger: CTGGCGGTCAGAGGGACCCCACAGGCCTGTGGTGCG...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCATCAGCCACGGAAACTaGACAAACCACGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSISHGN*TNHDFW
Trigger: CCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGAT...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCCAGAACAGAGCCGTCTaGTCCTCATTCATGATCAGC +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSQNRAV*SSFMIS
Trigger: GCTGATCATGAATGAGGAGCAGACGGCTCTGTTCTG...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGTCTGCCTCTCTCACTaGCACCATCTTCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSVCLSH*HHLLVP
Trigger: GGGAACAAGAAGATGGTGGCAGTGAGAGAGGCAGAC...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCAGCGGCATTGAAAAAGTaGTCCATGTTGGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKAAALKK*SMLAMR
Trigger: CCTCATGGCCAACATGGAGCACTTTTTCAATGCCGC...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGATATCACGGTCCCCGTaGTTTGGAGGAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVISRSP*FGGAAG
Trigger: TCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATAT...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTACTGAGTGCACGCCGTaGGATTGCGGTACTTGCCTA +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGTECTP*DCGTCL
Trigger: TAGGCAAGTACCGCAATCGCACGGCGTGCACTCAGT...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTCCTCTTTGGGCCCTaGCTGGTGACGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTFLFGP*LVTEAL
Trigger: GAGAGCCTCCGTCACCAGGCAGGGCCCAAAGAGGAA...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGATCTGCGTCAAACCTCTaGTGGAGGTACTCAATCCCC +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRSASNL*WRYSIP
Trigger: GGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGA...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTATGGAGAACGGGAGGTaGTGGGCAATGGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAMENGR*WAMVFR
Trigger: CCTGAAAACCATTGCCCAGCACCTCCCGTTCTCCAT...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGTGGACTAGCCTGTCGTaGAGATGGTGCATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKWTSLS*RWCIQR
Trigger: TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCA...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCCTTCCCCGACTCTCTaGGCTCCATGGCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILPSPTL*APWPRF
Trigger: AAAGCGGGGCCATGGAGCCCAGAGAGTCGGGGAAGG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCACAAACCACGACTTCTaGATGGACCGGGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSTNHDF*MDRGFR
Trigger: TCTGAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGT...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTGCCTTGCTCTTCGCGTaGTATTTGAGAGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAALLFA*YLRVST
Trigger: GGTGGAGACTCTCAAATACCACGCGAAGAGCAAGGC...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGCCCTCCGCTCCAGTTTaGAGATCAAGTCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVPSAPV*RSSLAW
Trigger: CCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGG...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGACGGTCCCCGTGCTTTaGAGGAGCTGCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLTVPVL*RSCRIF
Trigger: GAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGT...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGCTCTGCAGCTCAACATaGCTGAGCCATCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEELCSST*LSHPSP
Trigger: TGGGGACGGATGGCTCAGCCATGTTGAGCTGCAGAG...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTCAGAACTTGACAAAGTaGAAGCCGCGCATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAQNLTK*KPRMSF
Trigger: GAAGCTCATGCGCGGCTTCCACTTTGTCAAGTTCTG...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGAGAACGGGAGGTGCTaGGCAATGGTTTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLENGRC*AMVFRP
Trigger: GGGCCTGAAAACCATTGCCCAGCACCTCCCGTTCTC...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGATACCCCTGCTGCTCTaGGATGCCACTGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEEIPLLL*DATAHF
Trigger: GAAGTGGGCAGTGGCATCCCAGAGCAGCAGGGGTAT...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCCCCTCTAACAAGGTaGTCTTTCCCATTCCCACTT +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPPLTR*SFPFPL
Trigger: AAGTGGGAATGGGAAAGACCACCTTGTTAGAGGGGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTGTGCCTCTAGGGCGGTaGTTCTGTGGTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGVPLGR*FCGSEA
Trigger: AGCTTCAGAACCACAGAACCACCGCCCTAGAGGCAC...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCTACATACTGGTTACTTaGAATGTCAGACCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGYILVT*NVRPGG
Trigger: CCCACCGGGTCTGACATTCCAAGTAACCAGTATGTA...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACGCCCCGTGTAACCTCTaGCTAACCGAGATGATTTAT +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNAPCNL*LTEMIY
Trigger: ATAAATCATCTCGGTTAGTCAGAGGTTACACGGGGC...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGTCATTCAGGGGCCTTaGGTGGTATGCAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRVIQGP*VVCNGV
Trigger: TACTCCATTGCATACCACTCAAGGCCCCTGAATGAC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGTCCCTGGTGGGACCTTaGACCTCCATTTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEESLVGP*TSISPM
Trigger: CATGGGAGAAATGGAGGTGCAAGGTCCCACCAGGGA...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGGCAGGAGCTCAGCCATaGTATCAAATCCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVAGAQP*YQILPE
Trigger: CTCTGGGAGGATTTGATAGCATGGCTGAGCTCCTGC...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGTGCGATTGCGGTACTTaGCTAATATCACGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVCDCGT*LISRSP
Trigger: CGGGGACCGTGATATTAGGCAAGTACCGCAATCGCA...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATGGCGCCGCACCTTCCTaGAGCTCGTTCAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDGAAPS*SSFSLL
Trigger: CAAGAGGCTGAACGAGCTGCAGGAAGGTGCGGCGCC...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGTTTGGAGATCAAGTCTaGCTTGGCAGCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLFGDQV*LGSGRS
Trigger: GGACCTGCCGCTGCCAAGCCAGACTTGATCTCCAAA...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGCGTTTTTGCAGAGCATaGAGAACGGGAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLRFCRA*RTGGAG
Trigger: CCCAGCACCTCCCGTTCTCCATGCTCTGCAAAAACG...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCATCTTCTTCCTTCTTaGCCATTGGCTGACAAAGGG +
Preference number: 4 (lower is better)
Translates to: KIILLLISGLLSLPRRSCHLLPS*PLADKG
Trigger: CCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATG...GCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTTCTGCTCCTCATTCATaGTCAGCCACGGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGSAPHS*SATETA
Trigger: TGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGA...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTTCTGCAGAAGGGTCCTaGATGCAGGATTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGSAEGS*MQDSTA
Trigger: TGCAGTAGAATCCTGCATTCAGGACCCTTCTGCAGA...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCTGTGCAAAGGGCTTGTaGTTGTTTCGCCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSCAKGL*LFRPKG
Trigger: TCCTTTAGGGCGAAACAATCACAAGCCCTTTGCACA...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGTCCTTGATCCAGGGTaGAGCCCTCCGCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILVLDPG*SPPLQF
Trigger: AAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGAC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTATGGACAGGCAGCAGCTaGGGGATGACCTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVWTGSS*GMTSWN
Trigger: GTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCA...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGAGAACTTTCTTGGGTaGTCTGTGCAAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRENFLG*SVQRAC
Trigger: ACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTATCCAAGCAGATGCCGTaGAGCCGCCCATCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALSKQMP*SRPSLK
Trigger: CTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGA...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CCCCAGGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCCATCATTCCCAAAACTaGCAAGTTCAATCCCACTTG +
Preference number: 4 (lower is better)
Translates to: PQGSSEKSGLACRADGAFHHSQN*QVQSHL
Trigger: CAAGTGGGATTGAACTTGCCAGTTTTGGGAATGATG...GAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAGCAAGCTGGGATGGATaGCGCCCACTTCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVASWDG*RPLPAC
Trigger: ACAGGCAGGAAGTGGGCGCCATCCATCCCAGCTTGC...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTAGGAAGCATGTGTGCTaGAACAGCACCTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGRKHVC*NSTLMW
Trigger: CCACATCAAGGTGCTGTTCCAGCACACATGCTTCCT...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTCTACCAGTTACATACTaGTTACTTGGAATGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IILLLISGLLSLPRRSCPLPVTY*LLGMSD
Trigger: GTCTGACATTCCAAGTAACCAGTATGTAACTGGTAG...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTCACCTGGAGTCGCTATaGCTATTGGGATCAAACTAC +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAHLESL*LLGSNY
Trigger: GTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTG...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GGGCAGCTCAGAGAAGAGTGGACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGGAGTAAGTACACAGTaGTGTCATCAAACGTCACAG +
Preference number: 4 (lower is better)
Translates to: GQLREEWTSLSCRWCIQRGVSTQ*CHQTSQ
Trigger: CTGTGACGTTTGATGACATCACTGTGTACTTACTCC...TCTCTGAATGCACCATCTGCACGACAGGCTAGTCCACTCTTCTCTGAGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGTTGACCGTTTGTCCCTaGTGGAGGGGTATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILLTVCP*WRGILG
Trigger: GCCGAGAATACCCCTCCATCAGGGACAAACGGTCAA...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGTGGAGTAGGCGGCATTaGAAAAGTGCTCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLWSRRH*KSAPCW
Trigger: CCAACATGGAGCACTTTTTCAATGCCGCCTACTCCA...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAGCTGGAACAGCACCTTaGTGTGGAATCCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALAGTAP*CGIPVG
Trigger: ACCCACAGGGATTCCACATCAAGGTGCTGTTCCAGC...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGATGGGGTCCCTCGCTaGCAAGGCATTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILDGVPR*QGIDTE
Trigger: TTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTCAGAAGGGTCCTGAATaGAGGATTCTACTGCATCAT +
Preference number: 4 (lower is better)
Translates to: RHKEEGINQTTACSRAGAQKGPE*RILLHH
Trigger: ATGATGCAGTAGAATCCTGCATTCAGGACCCTTCTG...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAAAGACGGTGCGGATGTaGCGGTCACACTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALKTVRM*RSHFFT
Trigger: GGTGAAGAAGTGTGACCGGCACATCCGCACCGTCTT...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGGAAGTCCCAGAACAATaGCTCTGGGGGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILEVPEQ*LWGLLQ
Trigger: CTGCAAGAGCCCCCAGAGGCATTGTTCTGGGACTTC...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCTGCCAAGACGGAGCTaGCCTTGGAAGGAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILLPRRS*PWKEKC
Trigger: GCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTAGGGCAGAGAAACCCTaGCTGCTGACTTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTRAEKP*LLTCLI
Trigger: AATGAGGCAAGTCAGCAGGCAGGGTTTCTCTGCCCT...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTAGTTCACATCCACAGTaGCTGACCTGGGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTSSHPQ*LTWASS
Trigger: GGAACTTGCCCAGGTCAGGCACTGTGGATGTGAACT...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAGTCCACTCTCCCTGGTaGGACCTTGCACCTCCATTT +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALVHSPW*DLAPPF
Trigger: AAATGGAGGTGCAAGGTCCCACCAGGGAGAGTGGAC...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATAGATCAAGTCTGGCTTaGCAGCGGCAGGTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDRSSLA*QRQVPR
Trigger: CCTTGGGACCTGCCGCTGCCAAGCCAGACTTGATCT...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCACTGAGCAGAAGAGTTTaGTCTCTTTGGGGTCAATTA +
Preference number: 4 (lower is better)
Translates to: QPRICRACPSDHRGVSKALSRRV*SLWGQL
Trigger: TAATTGACCCCAAAGAGACCAAACTCTTCTGCTCAG...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATAGCACGATCTCCTTCTaGCACACCTCGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDSTISF*HTSDRG
Trigger: GCCTCTGTCCGAGGTGTGCCAGAAGGAGATCGTGCT...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGCTCATTTCCTGCCCATaGTTAAGGAAGGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVLISCP*LRKAEP
Trigger: AGGTTCTGCCTTCCTTAACCATGGGCAGGAAATGAG...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp TTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACAGTCTCCAGTCGCTATGGCTATTaGGATCAAACTACCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LDCGQPPWNIPQGCPTVSSRYGY*DQTTSY
Trigger: GTAACTGGTAGTTTGATCCCAATAGCCATAGCGACT...GGAGACTGTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGTCCCTCACTCCCACCTaGAGTCGCTATGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILSLTPT*SRYGYW
Trigger: CCAATAGCCATAGCGACTCCAGGTGGGAGTGAGGGA...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACGTCCACTGCCTGTACTaGGGTGGGAAAGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNVHCLY*GGKGRL
Trigger: AAGCCTACCTTTCCCACCTCAGTACAGGCAGTGGAC...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGAGGCATAAACAGGAAGCCTCTCCAACAAGGGGGTCTCCAGCACTAGGGGCTGTTCAGCCTCTTGTTTaGGGACTGATAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: VRHKQEASPTRGSPALGAVQPLV*GLIKLE
Trigger: TTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAAC...AGCCCCTAGTGCTGGAGACCCCCTTGTTGGAGAGGCTTCCTGTTTATGCCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTTTCGGTTCATGGCCTTaGACCCCCGCTCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPFGSWP*TPAHSK
Trigger: CTTGCTGTGAGCGGGGGTTCAAGGCCATGAACCGAA...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACGCCTCAAATCTGAAATaGAGTCTAGATACATTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNASNLK*SLDTLQ
Trigger: CTGCAATGTATCTAGACTGCATTTCAGATTTGAGGC...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAGGCAGGTCCCAAGGATaGCAACAGCTCGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALGRSQG*QQLVVH
Trigger: ATGAACTACGAGCTGTTGGCATCCTTGGGACCTGCC...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTAGCCTGTCGTGCAGATGGTGCATTCAGAGAGCAACTCCTACAACAAGGACTCTCGAAGTACCCATCTaGTGTCTCACTGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSLSCRWCIQRATPTTRTLEVPI*CLTVER
Trigger: CCTCTCTACAGTGAGACAGCAGATGGGTACTTCGAG...AGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCACCATCTGCACGACAGGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTGGGCCAGGGCGTTTTTaGAGAGCATGGAGAACGGGA +
Preference number: 4 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPGPGRF*RAWRTG
Trigger: TCCCGTTCTCCATGCTCTGCAAAAACGCCCTGGCCC...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTCCTTGGAAGGAAAAGTaGTTCACTTTAGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGPWKEK*FTLGGR
Trigger: CCTTCCACCTAAAGTGAAGCACTTTTCCTTCCAAGG...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGACTTGCCTCATTTCCTaGCCATGGTTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEETCLIS*PWLRKA
Trigger: TGCCTTCCTTAACCATGGGCAGGAAATGAGGCAAGT...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGCGCAGGAAGCATGTGTaGTGGAACAGCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILRRKHV*WNSTLM
Trigger: CATCAAGGTGCTGTTCCAGCACACATGCTTCCTGCG...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTACACGTACATACGGATaGTGTCAAGACTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGTRTYG*CQDYRQ
Trigger: TTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGT...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTACGCTGATGCTGACGTaGAGAGGGCGAGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPTLMLT*RGRVAS
Trigger: GGAAGCAACTCGCCCTCTCCACGTCAGCATCAGCGT...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATCCAAACCATGACCTCTaGATGGAACGGGGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDPNHDL*MERGLY
Trigger: ATACAGGCCCCGTTCCATTCAGAGGTCATGGTTTGG...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCAGTCTCCACCTTGAATaGTCCTGTATAACCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TYIRMLSRLQARRRVATSSLHLE*SCITFY
Trigger: ATAGAAGGTTATACAGGACCATTCAAGGTGGAGACT...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCAGAGTTTGGTCTCTTTaGGGTCAATTACTAACCATG +
Preference number: 4 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVRVWSL*GQLLTM
Trigger: CATGGTTAGTAATTGACCCCAAAGAGACCAAACTCT...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTACTCACTGTATCCTGTTaGGAGGGAGCACTCGAAATA +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALLTVSC*EGALEI
Trigger: TATTTCGAGTGCTCCCTCCCAACAGGATACAGTGAG...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACTTCCTTCTTGGCCATTaGCTGACAAAGGGGAACGGA +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNFLLGH*LTKGNG
Trigger: TCCGTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAA...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTCACAGTTACTGTATTTaGCTAAGCACACACCTGTAT +
Preference number: 4 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGHSYCI*LSTHLY
Trigger: ATACAGGTGTGTGCTTAGCCAAATACAGTAACTGTG...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp CTACAACAAGGACTTTGGAGACAAATTCCTACCTGTCCCACTAAGGACGAGGATTCACCTCCATCTGCTTaGAGTAGCGGATGTAAATCC +
Preference number: 4 (lower is better)
Translates to: LQQGLWRQIPTCPTKDEDSPPSA*SSGCKS
Trigger: GGATTTACATCCGCTACTTCAAGCAGATGGAGGTGA...ATCCTCGTCCTTAGTGGGACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTAGGACTGATAAAACTTaGAGACGGTGCGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPRTDKT*RRCGCA
Trigger: GGCACATCCGCACCGTCTTCAAGTTTTATCAGTCCT...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACTCCACCATCTGGAGCTaGAGGAAGAGAACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNSTIWS*RKRTFL
Trigger: CAAGAAAGTTCTCTTCCTGCAGCTCCAGATGGTGGA...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACAAGTTCAATCCCACTTaGCCAGGCCATGGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNKFNPT*PGHGVK
Trigger: TTTGACACCATGGCCTGGCCAAGTGGGATTGAACTT...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR GCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACATGGCGCCCACTTCCTaGCTGTTTAAAACAAGTATC +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNMAPTS*LFKTSI
Trigger: GATACTTGTTTTAAACAGGCAGGAAGTGGGCGCCAT...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
3UTR CAA 72 bp CTATTGGGATCAAACTACCAGTTACATACTGGTTACTaGGAATGTCAGACCCGGTGGGTATCAGTCATCAGG +
Preference number: 4 (lower is better)
Translates to: LLGSNYQLHTGY*ECQTRWVSVIR
Trigger: CCTGATGACTGATACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCCCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGCGAGATGATTTATCATaGAGATTAGGTCTTTCTATG +
Preference number: 4 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEERDDLS*RLGLSM
Trigger: CATAGAAAGACCTAATCTCCATGATAAATCATCTCG...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CCA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTACTACAACAAGGACTTTaGAGACAAATTCCTACCTGT +
Preference number: 4 (lower is better)
Translates to: EENFLGCSVQRACDCFALLQQGL*RQIPTC
Trigger: ACAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAG...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR TCA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACTGTGGATGCCATCAGTaGTTTCTTTTTGCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNCGCHQ*FLFASN
Trigger: ATTTGAGGCAAAAAGAAATCACTGATGGCATCCACA...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp GGTGCCTGGCCAGGGCGGGCCAGCTCACGAGCAGCGCGTGCAGCGTaGGCCTCCTGCTGGCCACCCAGCGGACCGCATTCAGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: GAWPGRASSRAARAA*ASCWPPSGPHSDPS
Trigger: TGAAGGATCTGAATGCGGTCCGCTGGGTGGCCAGCAGGAGGCGCACGCTGCACGCGCTGCTCGTGAGCTGGCCCGCCCTGGCCAGGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp AGATCGATGCTCCCGCAGGCGTCCACCACAGCCAGGTGCAGCCGGTaGGCCACGCAGTGGACAGGCAGCAGCTGCGGGATGACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSMLPQASTTARCSR*ATQWTGSSCGMTSW
Trigger: CCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAGCATCGATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp TTCTTCACCAGATCGATGCTCCCGCAGGCGTCCACCACAGCCAGGTaGAGCCGGTGGGCCACGCAGTGGACAGGCAGCAGCTGCGGGATG +
Preference number: 5 (lower is better)
Translates to: FFTRSMLPQASTTAR*SRWATQWTGSSCGM
Trigger: CATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAGCATCGATCTGGTGAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp GGCTGGCACCTGGGCACAGGTGTAGACATGGCTGAAACGCCGGCCTaGGGAGGTCAGGTACCAGTGCTGGATGGCGGGCTGGGGGTCGTA +
Preference number: 5 (lower is better)
Translates to: GWHLGTGVDMAETPA*GGQVPVLDGGLGVV
Trigger: TACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAGCCATGTCTACACCTGTGCCCAGGTGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp TTGCAGGGGAGCGGGCTGGCACCTGGGCACAGGTGTAGACATGGCTaGAACGCCGGCCTGAGGAGGTCAGGTACCAGTGCTGGATGGCGG +
Preference number: 5 (lower is better)
Translates to: LQGSGLAPGHRCRHG*NAGLRRSGTSAGWR
Trigger: CCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAGCCATGTCTACACCTGTGCCCAGGTGCCAGCCCGCTCCCCTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp GGAGGCACGGGCCTCCACGGGAGAGCCTGGAAGCAACGCGGAGTCTaGAGCCGAGGCCTGTGTGTCTGCCTCTCTCACTGCCACCATCTT +
Preference number: 5 (lower is better)
Translates to: GGTGLHGRAWKQRGV*SRGLCVCLSHCHHL
Trigger: AAGATGGTGGCAGTGAGAGAGGCAGACACACAGGCCTCGGCTGCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAGGCCCGTGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp AATGCTGGAACTGCAGCAGGAGGCACGGGCCTCCACGGGAGAGCCTaGAAGCAACGCGGAGTCTGCAGCCGAGGCCTGTGTGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NAGTAAGGTGLHGRA*KQRGVCSRGLCVCL
Trigger: GAGGCAGACACACAGGCCTCGGCTGCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAGGCCCGTGCCTCCTGCTGCAGTTCCAGCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp AAACGCCGGCCTGAGGAGGTCAGGTACCAGTGCTGGATGGCGGGCTaGGGGTCGTACTCCGTGACGGCCACGCCGTTCACAGCTGTCATC +
Preference number: 5 (lower is better)
Translates to: KRRPEEVRYQCWMAG*GSYSVTATPFTAVI
Trigger: GATGACAGCTGTGAACGGCGTGGCCGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp GCTCACAGCAAGAGGTGGAGATGGGCACACAGACCACCACGGCCATaGGCTTGCTTAGCAGGGGGAAGCGGCAGTGCTGGGCCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: AHSKRWRWAHRPPRP*ACLAGGSGSAGPGR
Trigger: ACGCCCTGGCCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCTGTGTGCCCATCTCCACCTCTTGCTGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp ACAGCCAGGTGCAGCCGGTGGGCCACGCAGTGGACAGGCAGCAGCTaGGGGATGACCTCCTGGAACTTTTCCACAAGGCCTCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TARCSRWATQWTGSS*GMTSWNFSTRPPLQ
Trigger: CTGCAGAGGAGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp CCGCCCATCCTTGAAGCTGGCGTTGAATTCTTCCTCTTTGGGCCCTaGCTGGTGACGGAGGCTCTCCAGTGCCACGTAGGCGCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PPILEAGVEFFLFGP*LVTEALQCHVGAAQ
Trigger: CTGGGCCGCGCCTACGTGGCACTGGAGAGCCTCCGTCACCAGGCAGGGCCCAAAGAGGAAGAATTCAACGCCAGCTTCAAGGATGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp ATCTGCAGTGAAGAGCGGCTCCGGGCTGGCCAGAACATCTCCAGGTaGGTCTCTGATGCTCCGGAACCGGGCTGCCCAGATGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ICSEERLRAGQNISR*VSDAPEPGCPDGVP
Trigger: AGGGACCCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTGGCCAGCCCGGAGCCGCTCTTCACTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp AGTAGCGGATGTAAATCCCCACGCAGGCCTGCTCGGAGGCGTCGGTaGAGCTGTCCAGCAGCACGCTCACACAGGGCGAGTTCCGCACGT +
Preference number: 5 (lower is better)
Translates to: SSGCKSPRRPARRRR*SCPAARSHRASSAR
Trigger: ACGTGCGGAACTCGCCCTGTGTGAGCGTGCTGCTGGACAGCTCCACCGACGCCTCCGAGCAGGCCTGCGTGGGGATTTACATCCGCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp CAGTCCCAAGGACTCCCTGTCCCTCAGGACATCCCGGGGGCCTCCTaGCTGGTGTGGGGATACAGGAGTCTCTCGGGAGGCTCCATGATG +
Preference number: 5 (lower is better)
Translates to: QSQGLPVPQDIPGAS*LVWGYRSLSGGSMM
Trigger: CATCATGGAGCCTCCCGAGAGACTCCTGTATCCCCACACCAGCCAGGAGGCCCCCGGGATGTCCTGAGGGACAGGGAGTCCTTGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp GGTGCAGCCGGTGGGCCACGCAGTGGACAGGCAGCAGCTGCGGGATaGCCTCCTGGAACTTTTCCACAAGGCCTCCTCTGCAGCTCAACA +
Preference number: 5 (lower is better)
Translates to: GAAGGPRSGQAAAAG*PPGTFPQGLLCSST
Trigger: TGTTGAGCTGCAGAGGAGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp TCCTGCTGGCCACCCAGCGGACCGCATTCAGATCCTTCAGGCGGATaGTCTCCTGCTCCAGAGGCGCCGCACCTTCCTGCAGCTCGTTCA +
Preference number: 5 (lower is better)
Translates to: SCWPPSGPHSDPSGG*SPAPEAPHLPAARS
Trigger: TGAACGAGCTGCAGGAAGGTGCGGCGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATCTGAATGCGGTCCGCTGGGTGGCCAGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp GGCCCTGGACGCTGCCAAGCCATGGCTCTGGCCCTCGTCCGAACTTaGGGAACAGCTCAGGATTGGCAACAGTTGGTCCCAGTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GPGRCQAMALALVRT*GTAQDWQQLVPVVP
Trigger: TGGCACCACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGTCCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS GCA 90 bp GCCACCCAGCGGACCGCATTCAGATCCTTCAGGCGGATGATCTCCTaGTCCAGAGGCGCCGCACCTTCCTGCAGCTCGTTCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ATQRTAFRSFRRMIS*SRGAAPSCSSFSLL
Trigger: CAAGAGGCTGAACGAGCTGCAGGAAGGTGCGGCGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATCTGAATGCGGTCCGCTGGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp CAGACCACCACGGCCATGAGCTTGCTTAGCAGGGGGAAGCGGCAGTaGTGGGCCAGGGCGTTTTTGCAGAGCATGGAGAACGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QTTTAMSLLSRGKRQ*WARAFLQSMENGRC
Trigger: GCACCTCCCGTTCTCCATGCTCTGCAAAAACGCCCTGGCCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp GCAGTCCTTCAGAACCTCCGCTGCTTCCCTGGAGGGCAGGATGGGTaGCTTCTGGGTCCTGGGCTCCTCCACATAGAGGGCTCCCATCTC +
Preference number: 5 (lower is better)
Translates to: AVLQNLRCFPGGQDG*LLGPGLLHIEGSHL
Trigger: GAGATGGGAGCCCTCTATGTGGAGGAGCCCAGGACCCAGAAGCCACCCATCCTGCCCTCCAGGGAAGCAGCGGAGGTTCTGAAGGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp GTCTCTGATGCTCCGGAACCGGGCTGCCCAGATGGGGTCCCTCGCTaGCAAGGCATTGACACAGAACATGTGGGCCTTGCTCTTCGCGTG +
Preference number: 5 (lower is better)
Translates to: VSDAPEPGCPDGVPR*QGIDTEHVGLALRV
Trigger: CACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp GGCCAGAACATCTCCAGGTGGGTCTCTGATGCTCCGGAACCGGGCTaGCCAGATGGGGTCCCTCGCTGCCAAGGCATTGACACAGAACAT +
Preference number: 5 (lower is better)
Translates to: GQNISRWVSDAPEPG*PDGVPRCQGIDTEH
Trigger: ATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTGGCCCTCGTCCGAACTaGCGGAACAGCTCAGGATTG +
Preference number: 5 (lower is better)
Translates to: IILLLISGLLSLPRRSCPGPRPN*RNSSGL
Trigger: CAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCC...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGCTCCCTGGTGGGACCTaGCACCTCCATTTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: LPWEWEAADYGERAHPQGLPGGT*HLHFSH
Trigger: ATGGGAGAAATGGAGGTGCAAGGTCCCACCAGGGAG...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTGAGATCAAGTCTGGCTaGGCAGCGGCAGGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: IILLLISGLLSLPRRSCPEIKSG*AAAGPK
Trigger: CTTGGGACCTGCCGCTGCCAAGCCAGACTTGATCTC...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTACCCTGGGAATGGGAAGCGGCAGACTATGGAGAAAGGGCCCACCCACAGGGGACCAGGACACTCCTCTaGCCACCAAAACTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LPWEWEAADYGERAHPQGTRTLL*PPKLRG
Trigger: GCCCCTGAGTTTTGGTGGCAAGAGGAGTGTCCTGGT...CCCCTGTGGGTGGGCCCTTTCTCCATAGTCTGCCGCTTCCCATTCCCAGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp TGCCACCATCTTCTTGTTCCCTGGAGGACGACCTTTCCCCCACTTTaGCCCATTTGGGTCCTTGATCCAGGGTGCAGCCCTCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CHHLLVPWRTTFPPL*PIWVLDPGCSPPLQ
Trigger: CTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTCCTCCAGGGAACAAGAAGATGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS-3UTR CAA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTCAGGATTGGCAACAGTaGGTCCCAGTGGTGCCACCA +
Preference number: 5 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGQDWQQ*VPVVPP
Trigger: TGGTGGCACCACTGGGACCAACTGTTGCCAATCCTG...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTTCCGCTACCTCCAGTTaGTCCAAGCAGATGCCGTGG +
Preference number: 5 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGSATSS*SKQMPW
Trigger: CCACGGCATCTGCTTGGACAAACTGGAGGTAGCGGA...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CAGCCTAGAATCTGCAGAGCCTGTCCCAGTGATCACAGAGGCGTCTCCAAGGCACGTGGAGAGGGCGAGTaGCTTCCCCTAGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: QPRICRACPSDHRGVSKARGEGE*LPLAST
Trigger: GGTGGAAGCTAGGGGAAGCAACTCGCCCTCTCCACG...TGCCTTGGAGACGCCTCTGTGATCACTGGGACAGGCTCTGCAGATTCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp TCCCTGGAGGACGACCTTTCCCCCACTTTGGCCCATTTGGGTCCTTaGTCCAGGGTGCAGCCCTCCGCTCCAGTTTGGAGATCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SLEDDLSPTLAHLGP*SRVQPSAPVWRSSL
Trigger: CAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTCCTCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS GCA 90 bp ACGACCTTTCCCCCACTTTGGCCCATTTGGGTCCTTGATCCAGGGTaGAGCCCTCCGCTCCAGTTTGGAGATCAAGTCTGGCTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: TTFPPLWPIWVLDPG*SPPLQFGDQVWLGS
Trigger: GCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS CCA 90 bp ACTTGGCAGGAGCTCAGCCATGCTATCAAATCCTCCCAGAGGCCCTaGGGGGTAGAATATGGGGCAATCTGCAGTGAAGAGCGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: TWQELSHAIKSSQRP*GVEYGAICSEERLR
Trigger: CCGGAGCCGCTCTTCACTGCAGATTGCCCCATATTCTACCCCCCAGGGCCTCTGGGAGGATTTGATAGCATGGCTGAGCTCCTGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000488265.1
CDS CCA 90 bp TGGAGGTACTCAATCCCCGTCAGGACTGTCCTCTCCCTATCCGCCTaGAACCGCTGTTCCGCTACCTCCAGTTTGTCCAAGCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: WRYSIPVRTVLSLSA*NRCSATSSLSKQMP
Trigger: CGGCATCTGCTTGGACAAACTGGAGGTAGCGGAACAGCGGTTCCAGGCGGATAGGGAGAGGACAGTCCTGACGGGGATTGAGTACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp TCCATGTTCTTCAGCTGTGGGGGTCGGTCTGCGTCAAACCTCTGCTaGAGGTACTCAATCCCCGTCAGGACTGTCCTCTCCCTATCCGCC +
Preference number: 5 (lower is better)
Translates to: SMFFSCGGRSASNLC*RYSIPVRTVLSLSA
Trigger: GGCGGATAGGGAGAGGACAGTCCTGACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp TGTTTCTTCCGGCCCAGTCTCCCTCGATGTGTCCACTGCCTGTACTaGGGTGGGAAAGGTAGGCTTTCTTCTGAGGCGGGAGGGACTGTC +
Preference number: 5 (lower is better)
Translates to: CFFRPSLPRCVHCLY*GGKGRLSSEAGGTV
Trigger: GACAGTCCCTCCCGCCTCAGAAGAAAGCCTACCTTTCCCACCTCAGTACAGGCAGTGGACACATCGAGGGAGACTGGGCCGGAAGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS TCA 90 bp GGGCGAGTTCCGCACGTCCTCCAGGATCTCCCTCTTCAGGGTCTCTaGGATGTACTTGATGAACTGAGTGCACGCCGTGCGATTGCGGTA +
Preference number: 5 (lower is better)
Translates to: GRVPHVLQDLPLQGL*DVLDELSARRAIAV
Trigger: TACCGCAATCGCACGGCGTGCACTCAGTTCATCAAGTACATCTCAGAGACCCTGAAGAGGGAGATCCTGGAGGACGTGCGGAACTCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp ACCTCCATGTTCTTCAGCTGTGGGGGTCGGTCTGCGTCAAACCTCTaGTGGAGGTACTCAATCCCCGTCAGGACTGTCCTCTCCCTATCC +
Preference number: 5 (lower is better)
Translates to: TSMFFSCGGRSASNL*WRYSIPVRTVLSLS
Trigger: GGATAGGGAGAGGACAGTCCTGACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp CTTCTTGTTCCCTGGAGGACGACCTTTCCCCCACTTTGGCCCATTTaGGTCCTTGATCCAGGGTGCAGCCCTCCGCTCCAGTTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: LLVPWRTTFPPLWPI*VLDPGCSPPLQFGD
Trigger: ATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTCCTCCAGGGAACAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS CCA 90 bp CAGGCTTCCGGAAGGGGATGTCCAGCTCATCCAGGGCAGAAACGATaGTCTCGAAGTACCCATCTGCTGTCTCACTGTAGAGAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: QASGRGCPAHPGQKR*SRSTHLLSHCREGP
Trigger: TGGCCCCTCTCTACAGTGAGACAGCAGATGGGTACTTCGAGACCATCGTTTCTGCCCTGGATGAGCTGGACATCCCCTTCCGGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp AGGGATGTGGATGGGCACCCATACCCAGTGGTGCCACCAGCTTGTTaGAACCACAGAGCTCCTTCTGTTGCTGGCTCAGCAGCACCCATT +
Preference number: 5 (lower is better)
Translates to: RDVDGHPYPVVPPAC*NHRAPSVAGSAAPI
Trigger: AATGGGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGTATGGGTGCCCATCCACATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS-3UTR CAA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCGTGCGATTGCGGTACTaGCCTAATATCACGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGVRLRY*PNITVP
Trigger: GGGGACCGTGATATTAGGCAAGTACCGCAATCGCAC...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTGTCATCATGAGCATGTaGAGCACCTCGTTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: IILLLISGLLSLPRRSCPVIMSM*STSLES
Trigger: GCTCTCCAACGAGGTGCTCAACATGCTCATGATGAC...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTTGCAGCCAGAGGTCTTaGAGGGAGCTCGAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RHKEEGINQTTACSRAGACSQRS*RELEAL
Trigger: GAGAGCCTCGAGCTCCCTCAAAGACCTCTGGCTGCA...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCAGTCCCTGGAGGAGGTaGTTCAAAGCCCTTGTCACT +
Preference number: 5 (lower is better)
Translates to: GPQETGHAPPDTPAALGCSPWRR*FKALVT
Trigger: AGTGACAAGGGCTTTGAACAACCTCCTCCAGGGACT...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp CTCCAGAGGCGCCGCACCTTCCTGCAGCTCGTTCAGCCTCTTGTTTaGGGACTGATAAAACTTGAAGACGGTGCGGATGTGCCGGTCACA +
Preference number: 5 (lower is better)
Translates to: LQRRRTFLQLVQPLV*GLIKLEDGADVPVT
Trigger: TGTGACCGGCACATCCGCACCGTCTTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAACGAGCTGCAGGAAGGTGCGGCGCCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp TGCACGCCGTGCGATTGCGGTACTTGCCTAATATCACGGTCCCCGTaGTTTGGAGGAGCTGCAGGATCTTCTCAAAGTCATTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: CTPCDCGTCLISRSP*FGGAAGSSQSHSGA
Trigger: GGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATATTAGGCAAGTACCGCAATCGCACGGCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp ACTTGGCCAGGCCATGGTGTCAAACACCTCCATGTTCTTCAGCTGTaGGGGTCGGTCTGCGTCAAACCTCTGCTGGAGGTACTCAATCCC +
Preference number: 5 (lower is better)
Translates to: TWPGHGVKHLHVLQL*GSVCVKPLLEVLNP
Trigger: GGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATGGCCTGGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTGGTGCCACCAGCTTGTaGGAACCACAGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RHKEEGINQTTACSRAGAGATSL*EPQSSF
Trigger: GAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACC...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp TCAGCTCCAGAACTACTCCCACAGAGACCCACTCACGGCTGCTCACAGGATGGCCAGAACATGTGGGCCTaGCTCTTCGCGTGGTATTTG +
Preference number: 5 (lower is better)
Translates to: SAPELLPQRPTHGCSQDGQNMWA*LFAWYL
Trigger: CAAATACCACGCGAAGAGCAAGGCCCACATGTTCTG...GCCATCCTGTGAGCAGCCGTGAGTGGGTCTCTGTGGGAGTAGTTCTGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGCCCATTTGGGTCCTaGATCCAGGGTGCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEEGPFGS*IQGAAL
Trigger: GAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCC...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAACCTAGCAGTGCCAGAAGCCCCGCTGAGCAGAAGAGTTaGGTCTCTTTGGGGTCAATT +
Preference number: 5 (lower is better)
Translates to: VEGRSGRGGCEPSSARSPAEQKS*VSLGSI
Trigger: AATTGACCCCAAAGAGACCAAACTCTTCTGCTCAGC...GGGGCTTCTGGCACTGCTAGGTTCACACCCTCCTCGCCCCGATCTTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGAGCTTCAGCATCCCTTaGGCCCGGTGCCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVSFSIP*ARCPIW
Trigger: CCAGATTGGGCACCGGGCCAAAGGGATGCTGAAGCT...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCACCTCGTTGGAGAGCTaGGTCCTCTCATCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVTSLES*VLSSVL
Trigger: CAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGT...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGGGCAAGTGCTGGAACAGCACCTaGATGTGGAATCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: PFSLPFHEFTSTVPDLGKCWNST*MWNPCG
Trigger: CCCACAGGGATTCCACATCAAGGTGCTGTTCCAGCA...CTTGCCCAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp AAGCCACAGCTCCCCTTGTGGGCTTCCCAAGTCAAAGGAGGGTGGTaGATAAGAGGCTCGGTGCGTCTTTACCCAAGGATGCCAACAGCT +
Preference number: 5 (lower is better)
Translates to: KPQLPLWASQVKGGW*IRGSVRLYPRMPTA
Trigger: AGCTGTTGGCATCCTTGGGTAAAGACGCACCGAGCCTCTTATTCACCACCCTCCTTTGACTTGGGAAGCCCACAAGGGGAGCTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488265.1
CDS TCA 90 bp TCCAGTGTTCCTGACGCAGATGAGGTTGGGAATGCCGATCTAAATTaGCAGTGGCAGGGATGTGGATGGGCACCCATACCCAGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: SSVPDADEVGNADLN*QWQGCGWAPIPSGA
Trigger: GGCACCACTGGGTATGGGTGCCCATCCACATCCCTGCCACTGTCAATTTAGATCGGCATTCCCAACCTCATCTGCGTCAGGAACACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS GCA 90 bp CATGGTGTCAAACACCTCCATGTTCTTCAGCTGTGGGGGTCGGTCTaGGTCAAACCTCTGCTGGAGGTACTCAATCCCCGTCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: HGVKHLHVLQLWGSV*VKPLLEVLNPRQDC
Trigger: ACAGTCCTGACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp GGTAGGCTTTCTTCTGAGGCGGGAGGGACTGTCCACTCTCCCTGGTaGGACCTTGCACCTCCATTTCTCCCATGTAGCCCATCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GRLSSEAGGTVHSPW*DLAPPFLPCSPSVF
Trigger: AAAAACAGATGGGCTACATGGGAGAAATGGAGGTGCAAGGTCCCACCAGGGAGAGTGGACAGTCCCTCCCGCCTCAGAAGAAAGCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 90 bp AAAGGTAGGCTTTCTTCTGAGGCGGGAGGGACTGTCCACTCTCCCTaGTGGGACCTTGCACCTCCATTTCTCCCATGTAGCCCATCTGTT +
Preference number: 5 (lower is better)
Translates to: KGRLSSEAGGTVHSP*WDLAPPFLPCSPSV
Trigger: AACAGATGGGCTACATGGGAGAAATGGAGGTGCAAGGTCCCACCAGGGAGAGTGGACAGTCCCTCCCGCCTCAGAAGAAAGCCTACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 90 bp GCCCAGATGGGGTCCCTCGCTGCCAAGGCATTGACACAGAACATGTaGGCCTTGCTCTTCGCGTGGTATTTGAGAGTCTCCACCTTGAAT +
Preference number: 5 (lower is better)
Translates to: AQMGSLAAKALTQNM*ALLFAWYLRVSTLN
Trigger: ATTCAAGGTGGAGACTCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp GCCGTGCGATTGCGGTACTTGCCTAATATCACGGTCCCCGTGCTTTaGAGGAGCTGCAGGATCTTCTCAAAGTCATTCAGGGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: AVRLRYLPNITVPVL*RSCRIFSKSFRGLE
Trigger: CTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATATTAGGCAAGTACCGCAATCGCACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp TGGAACCGCTGTTCCGCTACCTCCAGTTTGTCCAAGCAGATGCCGTaGAGCCGCCCATCCTTGAAGCTGGCGTTGAATTCTTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: WNRCSATSSLSKQMP*SRPSLKLALNSSSL
Trigger: CAAAGAGGAAGAATTCAACGCCAGCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACTGGAGGTAGCGGAACAGCGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACCCTCTAGTTCAGCTCTaGAACTTGGCAGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNPLVQL*NLAGAQ
Trigger: CTGAGCTCCTGCCAAGTTCAAGAGCTGAACTAGAGG...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GGGCCTCAGGAAACAGGTCATGCACCTCCTGATACCCCTGCTGCTCTGGGATGCTGCAGTCTAGATACATaGCAGGAATTGCTCCATCCC +
Preference number: 5 (lower is better)
Translates to: GPQETGHAPPDTPAALGCCSLDT*QELLHP
Trigger: GGGATGGAGCAATTCCTGCAATGTATCTAGACTGCA...GCATCCCAGAGCAGCAGGGGTATCAGGAGGTGCATGACCTGTTTCCTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCGTGCACGCCGTGCGATaGCGGTACTTGCCTAATATC +
Preference number: 5 (lower is better)
Translates to: TYIRMLSRLQARRRVATSVHAVR*RYLPNI
Trigger: GATATTAGGCAAGTACCGCAATCGCACGGCGTGCAC...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTTGGAGCCGCCCATCCTaGAAGCTGGCGTTGAATTCT +
Preference number: 5 (lower is better)
Translates to: RHKEEGINQTTACSRAGAWSRPS*KLALNS
Trigger: AGAATTCAACGCCAGCTTCAAGGATGGGCGGCTCCA...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGTGGCGACAAGCCTTCCTTCTTGGCCATaGGCTGACAAAGGGGAACGG +
Preference number: 5 (lower is better)
Translates to: TYIRMLSRLQARRRVATSLPSWP*ADKGER
Trigger: CCGTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAG...GCTTGTCGCCACCCTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp ATGTTGGCCATGAGGTCGCTGGAGATCTCTGGAACGAGGGCAGTGTaGGGGGTGTCTTCCTTGATTTCAACCGTGTTGACACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: MLAMRSLEISGTRAV*GVSSLISTVLTQSL
Trigger: CAGGCTCTGTGTCAACACGGTTGAAATCAAGGAAGACACCCCTCACACTGCCCTCGTTCCAGAGATCTCCAGCGACCTCATGGCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp CTGATGGAGGGGTATTCTCGGCAAGCAGAGCAGAACAGAGCCGTCTaGTCCTCATTCATGATCAGCCACGGAAACTGCACAAACCACGAC +
Preference number: 5 (lower is better)
Translates to: LMEGYSRQAEQNRAV*SSFMISHGNCTNHD
Trigger: GTCGTGGTTTGTGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGACGGCTCTGTTCTGCTCTGCTTGCCGAGAATACCCCTCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS-3UTR CAA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGACTGCCACCATCTTCTaGTTCCCTGGAGGACGACCT +
Preference number: 5 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVTATIF*FPGGRP
Trigger: AGGTCGTCCTCCAGGGAACAAGAAGATGGTGGCAGT...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCATGTTGAGCACCTCGTaGGAGAGCTTGGTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVMLSTS*ESLVLS
Trigger: TGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACAT...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTTGTCACTGAGCGCCCATTCGGGGATGTCTCAGTGGGCCCTGGAGATCCTGGTGAGTCGCTATGGCTATaGGGATCAAACTACCAGTTA +
Preference number: 5 (lower is better)
Translates to: LVTERPFGDVSVGPGDPGESLWL*GSNYQL
Trigger: TAACTGGTAGTTTGATCCCAATAGCCATAGCGACTC...ACCAGGATCTCCAGGGCCCACTGAGACATCCCCGAATGGGCGCTCAGTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp CAGAACAGAGCCGTCTGCTCCTCATTCATGATCAGCCACGGAAACTaGACAAACCACGACTTCTGGATGGACCGGGGCTTCAGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: QNRAVCSSFMISHGN*TNHDFWMDRGFRSF
Trigger: GAAACTTCTGAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGACGGCTCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 90 bp TCCTCATTCATGATCAGCCACGGAAACTGCACAAACCACGACTTCTaGATGGACCGGGGCTTCAGAAGTTTCCTGTTTCTTCCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSFMISHGNCTNHDF*MDRGFRSFLFLPAQ
Trigger: CTGGGCCGGAAGAAACAGGAAACTTCTGAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGATCATGAATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 90 bp CATCATTCCCAAAACTGGCAAGTTCAATCCCACTTGGCCAGGCCATaGTGTCAAACACCTCCATGTTCTTCAGCTGTGGGGGTCGGTCTG +
Preference number: 5 (lower is better)
Translates to: HHSQNWQVQSHLARP*CQTPPCSSAVGVGL
Trigger: CAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATGGCCTGGCCAAGTGGGATTGAACTTGCCAGTTTTGGGAATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AAAAAGCCTTTCTCCCTCCCTTTCCACGAGTTCACATCCACAGTGCCTGACCTGCGGAACAGCTCAGGATaGGCAACAGTTGGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: KKPFSLPFHEFTSTVPDLRNSSG*ATVGPS
Trigger: ACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCCG...CAGGTCAGGCACTGTGGATGTGAACTCGTGGAAAGGGAGGGAGAAAGGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTGAAGCTAGAGCAGGCCCAAAGTCCCTGGAGGAGGTTGTTCAAAGCCCTTGTCTTGATTTCAACCGTGTaGACACAGAGCCTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: LKLEQAQSPWRRLFKALVLISTV*TQSLCA
Trigger: AGCGCACAGGCTCTGTGTCAACACGGTTGAAATCAA...GACAAGGGCTTTGAACAACCTCCTCCAGGGACTTTGGGCCTGCTCTAGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp CTGAGCCTGCCAAGACGGAGCTGCCCTTGGAAGGAAAAGTGCTTCACTTTAGGTAAAAAGTGCTCCATGTaGGCCATGAGGTCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSLPRRSCPWKEKCFTLGKKCSM*AMRSLE
Trigger: CTCCAGCGACCTCATGGCCAACATGGAGCACTTTTT...ACCTAAAGTGAAGCACTTTTCCTTCCAAGGGCAGCTCCGTCTTGGCAGGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AGGCACAAAGAGGAAGGGATTAATCAGACCACTGCCTGCAGCAGAGCTGGGGCTTCCTTGAAGCTGGCGTaGAATTCTTCCTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: RHKEEGINQTTACSRAGASLKLA*NSSSLG
Trigger: GCCCAAAGAGGAAGAATTCAACGCCAGCTTCAAGGA...AGCCCCAGCTCTGCTGCAGGCAGTGGTCTGATTAATCCCTTCCTCTTTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAACCACGGCCATGAGCTaGCTTAGCAGGGGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVTTAMS*LSRGKR
Trigger: CCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGT...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp TTCCCACTTAGACTGTGGGCAGCCTCCCTGGAACATTCCCCAGGGATGTCCAACTTACATACTGGTTACTaGGAATGTCAGACCCGGTGG +
Preference number: 5 (lower is better)
Translates to: FPLRLWAASLEHSPGMSNLHTGY*ECQTRW
Trigger: CCACCGGGTCTGACATTCCAAGTAACCAGTATGTAA...GTTGGACATCCCTGGGGAATGTTCCAGGGAGGCTGCCCACAGTCTAAGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 90 bp TTGCGGTACTTGCCTAATATCACGGTCCCCGTGCTTTGGAGGAGCTaGAGGATCTTCTCAAAGTCATTCAGGGGCCTTGAGTGGTATGCA +
Preference number: 5 (lower is better)
Translates to: LRYLPNITVPVLWRS*RIFSKSFRGLEWYA
Trigger: TGCATACCACTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATATTAGGCAAGTACCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ACTCCCACCTGGAGTCGCTATGGCTATTGGGATCAAACTACCAGTTACATACTGACAGAGCTCCTTCTGTaGCTGGCTCAGCAGCACCCA +
Preference number: 5 (lower is better)
Translates to: TPTWSRYGYWDQTTSYILTELLL*LAQQHP
Trigger: TGGGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTGT...CAGTATGTAACTGGTAGTTTGATCCCAATAGCCATAGCGACTCCAGGTGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp ATCATCCTCCTCCTGATAAGCGGCCTCCTGAGCCTGCCAAGACGGAGCTGCCCTAAGAGTTTGGTCTCTTaGGGGTCAATTACTAACCAT +
Preference number: 5 (lower is better)
Translates to: IILLLISGLLSLPRRSCPKSLVS*GSITNH
Trigger: ATGGTTAGTAATTGACCCCAAAGAGACCAAACTCTT...AGGGCAGCTCCGTCTTGGCAGGCTCAGGAGGCCGCTTATCAGGAGGAGGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACCACGGTCCCCGTGCTTaGGAGGAGCTGCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNHGPRA*EELQDL
Trigger: AAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTG...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp AATAAGATGGCAGTCATCTTCTTCCTTCTTGGCCATTGGCTGACAAAGGGGAACTGGGCCAGGGCGTTTTaGCAGAGCATGGAGAACGGG +
Preference number: 5 (lower is better)
Translates to: NKMAVIFFLLGHWLTKGNWARAF*QSMENG
Trigger: CCCGTTCTCCATGCTCTGCAAAAACGCCCTGGCCCA...GTTCCCCTTTGTCAGCCAATGGCCAAGAAGGAAGAAGATGACTGCCATCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAGGAGTCAGCAGGCACTaGGATCTCTGCTGCCACTTC +
Preference number: 5 (lower is better)
Translates to: EENFLGCSVQRACDCFALGVSRH*DLCCHF
Trigger: GAAGTGGCAGCAGAGATCCAAGTGCCTGCTGACTCC...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp CTTCCTGCAGCTCGTTCAGCCTCTTGTTTGAGGACTGATAAAACTTaGAGACGGTGCGGATGTGCCGGTCACACTTCTTCACCAGATCGA +
Preference number: 5 (lower is better)
Translates to: LPAARSASCLRTDKT*RRCGCAGHTSSPDR
Trigger: TCGATCTGGTGAAGAAGTGTGACCGGCACATCCGCACCGTCTTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAACGAGCTGCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 90 bp CCATCGAGAGGAGTCACAGAGCTGAGACTGAAGGAGCCAGGAAGTTaGGCACCAGGGATGTTTCTGGAAAGCATTGTCAAGGATATTGTG +
Preference number: 5 (lower is better)
Translates to: PSRGVTELRLKEPGS*APGMFLESIVKDIV
Trigger: CACAATATCCTTGACAATGCTTTCCAGAAACATCCCTGGTGCCCAACTTCCTGGCTCCTTCAGTCTCAGCTCTGTGACTCCTCTCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAAGTGGTGCCACCAGCTaGTTGGAACCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVSGATS*LEPQSS
Trigger: GGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACT...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAATGCCAGGACACGTACATACGGATGCTGTCAAGACTACAGGCAAGGAGGAGGGCCTGTATGTCCTCTaGATTCTCCTAGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: EMPGHVHTDAVKTTGKEEGLYVL*ILLGPS
Trigger: AGATGGACCTAGGAGAATCAAGAGGACATACAGGCC...CTCCTCCTTGCCTGTAGTCTTGACAGCATCCGTATGTACGTGTCCTGGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAGGTTGTTCAAAGCCCTaGTCACTGAGCGCCCATTCG +
Preference number: 5 (lower is better)
Translates to: EENFLGCSVQRACDCFALGCSKP*SLSAHS
Trigger: CGAATGGGCGCTCAGTGACAAGGGCTTTGAACAACC...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAGCAGGCCTGTGCCCCTaGAGAAATCGGGTAGTGCAA +
Preference number: 5 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVAGLCP*RNRVVQ
Trigger: TTGCACTACCCGATTTCTCAAGGGGCACAGGCCTGC...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp GCTTTGGAGGAGCTGCAGGATCTTCTCAAAGTCATTCAGGGGCCTTaGGTGGTATGCAATGGAGTAGGCGGCATTGAAAAAGTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: ALEELQDLLKVIQGP*VVCNGVGGIEKVLH
Trigger: ATGGAGCACTTTTTCAATGCCGCCTACTCCATTGCATACCACTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTACAAGTTCAATCCCACTaGGCCAGGCCATGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: EENFLGCSVQRACDCFALQVQSH*ARPWCQ
Trigger: TTGACACCATGGCCTGGCCAAGTGGGATTGAACTTG...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAAACCTTCTGGCACATTaGTGTGCTGTGAGGCATGGC +
Preference number: 5 (lower is better)
Translates to: EENFLGCSVQRACDCFALNLLAH*CAVRHG
Trigger: GCCATGCCTCACAGCACACAAATGTGCCAGAAGGTT...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GAAGGAAAAGTGCTTCACTTTAGGTGGAAGGAAGATCGGGGCGAGGAGGGTGTGCCTACAACAAGGACTTaGGAGACAAATTCCTACCTG +
Preference number: 5 (lower is better)
Translates to: EGKVLHFRWKEDRGEEGVPTTRT*ETNSYL
Trigger: CAGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGG...CACACCCTCCTCGCCCCGATCTTCCTTCCACCTAAAGTGAAGCACTTTTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp ATAAATCAGGAATACAATAAACATAAGCCACAGGATATGAAAGTGTaGTTCCGGCTGCCTGCTCCGGCTGAAAGCCCCCAGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: INQEYNKHKPQDMKV*FRLPAPAESPQSRS
Trigger: GCTCCTGCTCTGGGGGCTTTCAGCCGGAGCAGGCAGCCGGAATCACACTTTCATATCCTGTGGCTTATGTTTATTGTATTCCTGATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS-3UTR CAA 90 bp GAAGAGAACTTTCTTGGGTGCTCTGTGCAAAGGGCTTGTGATTGTTTCGCCCTAAGTCATTCAGGGGCCTaGAGTGGTATGCAATGGAGT +
Preference number: 5 (lower is better)
Translates to: EENFLGCSVQRACDCFALSHSGA*SGMQWS
Trigger: ACTCCATTGCATACCACTCAAGGCCCCTGAATGACT...TAGGGCGAAACAATCACAAGCCCTTTGCACAGAGCACCCAAGAAAGTTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTCCTCACTGTATCCTGTaGGGAGGGAGCACTCGAAAT +
Preference number: 5 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPPHCIL*GGSTRN
Trigger: ATTTCGAGTGCTCCCTCCCAACAGGATACAGTGAGG...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTAATTAGTCTTGACCGTTaGTCCCTGATGGAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVISLDR*SLMEGY
Trigger: ATACCCCTCCATCAGGGACAAACGGTCAAGACTAAT...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS-3UTR CAA 90 bp GTGCATTCAGAGAGCAACTCCTACAACAAGGACTTTGGAGACAAATTCCTACCTCTCTTCGCGTGGTATTaGAGAGTCTCCACCTTGAAT +
Preference number: 5 (lower is better)
Translates to: VHSESNSYNKDFGDKFLPLFAWY*RVSTLN
Trigger: ATTCAAGGTGGAGACTCTCAAATACCACGCGAAGAG...AGGTAGGAATTTGTCTCCAAAGTCCTTGTTGTAGGAGTTGCTCTCTGAATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 90 bp TTTCTTATTAAAATGTCTGTCTCTCCCACAAACGTGCTAGGCCCTTaGAAGCAGAGACCATGGATCAGCTGTGTTCATCTGGCACATAGT +
Preference number: 5 (lower is better)
Translates to: FLIKMSVSPTNVLGP*KQRPWISCVHLAHS
Trigger: ACTATGTGCCAGATGAACACAGCTGATCCATGGTCTCTGCTTTCAAGGGCCTAGCACGTTTGTGGGAGAGACAGACATTTTAATAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488265.1
CDS-3UTR CAA 90 bp GGATCAAACTACCAGTTACATACTGGTTACTTGGAATGTCAGACCCGGTGGGTATCACAGTTACTGTATTaGGCTAAGCACACACCTGTA +
Preference number: 5 (lower is better)
Translates to: GSNYQLHTGYLECQTRWVSQLLY*AKHTPV
Trigger: TACAGGTGTGTGCTTAGCCAAATACAGTAACTGTGA...TACCCACCGGGTCTGACATTCCAAGTAACCAGTATGTAACTGGTAGTTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp CCAGGGCGGGCCAGCTCACGAGCAGCGCGTGCAGCGTaGGCCTCCTGCTGGCCACCCAGCGGACCGCATTCA +
Preference number: 6 (lower is better)
Translates to: PGRASSRAARAA*ASCWPPSGPHS
Trigger: TGAATGCGGTCCGCTGGGTGGCCAGCAGGAGGCGCACGCTGCACGCGCTGCTCGTGAGCTGGCCCGCCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CTCCCGCAGGCGTCCACCACAGCCAGGTGCAGCCGGTaGGCCACGCAGTGGACAGGCAGCAGCTGCGGGATG +
Preference number: 6 (lower is better)
Translates to: LPQASTTARCSR*ATQWTGSSCGM
Trigger: CATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp AGATCGATGCTCCCGCAGGCGTCCACCACAGCCAGGTaGAGCCGGTGGGCCACGCAGTGGACAGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RSMLPQASTTAR*SRWATQWTGSS
Trigger: GCTGCTGCCTGTCCACTGCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAGCATCGATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp GCTCCGGGCTGGCCAGAACATCTCCAGGTGGGTCTCTaGTGCTCCGGAACCGGGCTGCCCAGATGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: APGWPEHLQVGL*CSGTGLPRWGP
Trigger: GGGACCCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTGGCCAGCCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GCCAGCTCACGAGCAGCGCGTGCAGCGTGCGCCTCCTaGTGGCCACCCAGCGGACCGCATTCAGATCCTTCA +
Preference number: 6 (lower is better)
Translates to: ASSRAARAACAS*WPPSGPHSDPS
Trigger: TGAAGGATCTGAATGCGGTCCGCTGGGTGGCCAGCAGGAGGCGCACGCTGCACGCGCTGCTCGTGAGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp ACTGCAGCAGGAGGCACGGGCCTCCACGGGAGAGCCTaGAAGCAACGCGGAGTCTGCAGCCGAGGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: TAAGGTGLHGRA*KQRGVCSRGLC
Trigger: ACACAGGCCTCGGCTGCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAGGCCCGTGCCTCCTGCTGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CTGAAACGCCGGCCTGAGGAGGTCAGGTACCAGTGCTaGATGGCGGGCTGGGGGTCGTACTCCGTGACGGCC +
Preference number: 6 (lower is better)
Translates to: LKRRPEEVRYQC*MAGWGSYSVTA
Trigger: GGCCGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GGCCTCCACGGGAGAGCCTGGAAGCAACGCGGAGTCTaGAGCCGAGGCCTGTGTGTCTGCCTCTCTCACTGC +
Preference number: 6 (lower is better)
Translates to: GLHGRAWKQRGV*SRGLCVCLSHC
Trigger: GCAGTGAGAGAGGCAGACACACAGGCCTCGGCTGCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp TGGCTGAAACGCCGGCCTGAGGAGGTCAGGTACCAGTaGTGGATGGCGGGCTGGGGGTCGTACTCCGTGACG +
Preference number: 6 (lower is better)
Translates to: WLKRRPEEVRYQ*WMAGWGSYSVT
Trigger: CGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CCTGAGGAGGTCAGGTACCAGTGCTGGATGGCGGGCTaGGGGTCGTACTCCGTGACGGCCACGCCGTTCACA +
Preference number: 6 (lower is better)
Translates to: PEEVRYQCWMAG*GSYSVTATPFT
Trigger: TGTGAACGGCGTGGCCGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp TGTCATCAAACGTCACAGGAGCCTTCCCCGACTCTCTaGGCTCCATGGCCCCGCTTTCGGAGGCCCGTGCCG +
Preference number: 6 (lower is better)
Translates to: CHQTSQEPSPTL*APWPRFRRPVP
Trigger: CGGCACGGGCCTCCGAAAGCGGGGCCATGGAGCCCAGAGAGTCGGGGAAGGCTCCTGTGACGTTTGATGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp GAAGAGCGGCTCCGGGCTGGCCAGAACATCTCCAGGTaGGTCTCTGATGCTCCGGAACCGGGCTGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: EERLRAGQNISR*VSDAPEPGCPD
Trigger: ATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTGGCCAGCCCGGAGCCGCTCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000488265.1
CDS CCA 72 bp TGTAAATCCCCACGCAGGCCTGCTCGGAGGCGTCGGTaGAGCTGTCCAGCAGCACGCTCACACAGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: CKSPRRPARRRR*SCPAARSHRAS
Trigger: ACTCGCCCTGTGTGAGCGTGCTGCTGGACAGCTCCACCGACGCCTCCGAGCAGGCCTGCGTGGGGATTTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp GTGGAGATGGGCACACAGACCACCACGGCCATGAGCTaGCTTAGCAGGGGGAAGCGGCAGTGCTGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: VEMGTQTTTAMS*LSRGKRQCWAR
Trigger: CCTGGCCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCTGTGTGCCCATCTCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp GGTAGCGCCGGTGGACCCAGGATAAGCGCGCTGAGCTaGGACTTGCGTCGCACCGAGCGAACAGCTTTACGG +
Preference number: 6 (lower is better)
Translates to: GSAGGPRISALS*DLRRTERTALR
Trigger: CCGTAAAGCTGTTCGCTCGGTGCGACGCAAGTCTCAGCTCAGCGCGCTTATCCTGGGTCCACCGGCGCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223210.5
ENST00000460379.1
ENST00000489820.5
CDS TCA 72 bp GGTGGGCCACGCAGTGGACAGGCAGCAGCTGCGGGATaGCCTCCTGGAACTTTTCCACAAGGCCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GGPRSGQAAAAG*PPGTFPQGLLC
Trigger: GCAGAGGAGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACTGCGTGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp CCACCCAGCGGACCGCATTCAGATCCTTCAGGCGGATaGTCTCCTGCTCCAGAGGCGCCGCACCTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPSGPHSDPSGG*SPAPEAPHLPA
Trigger: TGCAGGAAGGTGCGGCGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATCTGAATGCGGTCCGCTGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp CTGGGCACAGGTGTAGACATGGCTGAAACGCCGGCCTaGGGAGGTCAGGTACCAGTGCTGGATGGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LGTGVDMAETPA*GGQVPVLDGGL
Trigger: CAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAGCCATGTCTACACCTGTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp ATCTCCAGGTGGGTCTCTGATGCTCCGGAACCGGGCTaGCCAGATGGGGTCCCTCGCTGCCAAGGCATTGAC +
Preference number: 6 (lower is better)
Translates to: ISRWVSDAPEPG*PDGVPRCQGID
Trigger: GTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp TGCGGATGTGCCGGTCACACTTCTTCACCAGATCGATaGTCCCGCAGGCGTCCACCACAGCCAGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: CGCAGHTSSPDR*SRRRPPQPGAA
Trigger: GGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAGCATCGATCTGGTGAAGAAGTGTGACCGGCACATCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp GCTCCTCTGGCCCTGGACGCTGCCAAGCCATGGCTCTaGCCCTCGTCCGAACTTGCGGAACAGCTCAGGATT +
Preference number: 6 (lower is better)
Translates to: APLALDAAKPWL*PSSELAEQLRI
Trigger: AATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGTCCAGGGCCAGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 72 bp CTTCCCTGGAGGGCAGGATGGGTGGCTTCTGGGTCCTaGGCTCCTCCACATAGAGGGCTCCCATCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LPWRAGWVASGS*APPHRGLPSPP
Trigger: AGGAGGAGATGGGAGCCCTCTATGTGGAGGAGCCCAGGACCCAGAAGCCACCCATCCTGCCCTCCAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp CGGGCTGCCCAGATGGGGTCCCTCGCTGCCAAGGCATaGACACAGAACATGTGGGCCTTGCTCTTCGCGTGG +
Preference number: 6 (lower is better)
Translates to: RAAQMGSLAAKA*TQNMWALLFAW
Trigger: CCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp TGGCCCTGGACGCTGCCAAGCCATGGCTCTGGCCCTCGTCCGAACTaGCGGAACAGCTCAGGATTGGCAACAGTTGGTCCCAGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: WPWTLPSHGSGPRPN*RNSSGLATVGPSGA
Trigger: GGCACCACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGTCCAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CAA 90 bp GGCCCATTTGGGTCCTTGATCCAGGGTGCAGCCCTCCGCTCCAGTTaGGAGATCAAGTCTGGCTTGGCAGCGGCAGGTCCCAAGGATGCC +
Preference number: 6 (lower is better)
Translates to: GPFGSLIQGAALRSS*EIKSGLAAAGPKDA
Trigger: GGCATCCTTGGGACCTGCCGCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp GTCCTCTCCCTATCCGCCTGGAACCGCTGTTCCGCTACCTCCAGTTaGTCCAAGCAGATGCCGTGGAGCCGCCCATCCTTGAAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: VLSLSAWNRCSATSS*SKQMPWSRPSLKLA
Trigger: CGCCAGCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACTGGAGGTAGCGGAACAGCGGTTCCAGGCGGATAGGGAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp CAGCAAGAGGTGGAGATGGGCACACAGACCACCACGGCCATGAGCTaGCTTAGCAGGGGGAAGCGGCAGTGCTGGGCCAGGGCGTTTTTG +
Preference number: 6 (lower is better)
Translates to: QQEVEMGTQTTTAMS*LSRGKRQCWARAFL
Trigger: CAAAAACGCCCTGGCCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCTGTGTGCCCATCTCCACCTCTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp GGGCTGCCCAGATGGGGTCCCTCGCTGCCAAGGCATTaGCACAGAACATGTGGGCCTTGCTCTTCGCGTGGT +
Preference number: 6 (lower is better)
Translates to: GLPRWGPSLPRH*HRTCGPCSSRG
Trigger: ACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp AAGAGGTGGAGATGGGCACACAGACCACCACGGCCATaGGCTTGCTTAGCAGGGGGAAGCGGCAGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: KRWRWAHRPPRP*ACLAGGSGSAG
Trigger: CCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGCCGTGGTGGTCTGTGTGCCCATCTCCACCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp CGGACCGCATTCAGATCCTTCAGGCGGATGATCTCCTaGTCCAGAGGCGCCGCACCTTCCTGCAGCTCGTTC +
Preference number: 6 (lower is better)
Translates to: RTAFRSFRRMIS*SRGAAPSCSSF
Trigger: GAACGAGCTGCAGGAAGGTGCGGCGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATCTGAATGCGGTCCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GGGAGGCTCCATGATGCAGTCCTTCAGAACCTCCGCTaGTTCCCTGGAGGGCAGGATGGGTGGCTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: GRLHDAVLQNLR*FPGGQDGWLLG
Trigger: ACCCAGAAGCCACCCATCCTGCCCTCCAGGGAAGCAGCGGAGGTTCTGAAGGACTGCATCATGGAGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CCTTCAGAACCTCCGCTGCTTCCCTGGAGGGCAGGATaGGTGGCTTCTGGGTCCTGGGCTCCTCCACATAGA +
Preference number: 6 (lower is better)
Translates to: PSEPPLLPWRAG*VASGSWAPPHR
Trigger: TCTATGTGGAGGAGCCCAGGACCCAGAAGCCACCCATCCTGCCCTCCAGGGAAGCAGCGGAGGTTCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CACAGGCCTAGTTTCCGAGTTTCCCTCCCGGCCCCTTaGGGCATTCTGAGGCACCAGGAGACAGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: HRPSFRVSLPAP*GILRHQETDPG
Trigger: TCCTGGGTCTGTCTCCTGGTGCCTCAGAATGCCCCAAGGGGCCGGGAGGGAAACTCGGAAACTAGGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS CAA 72 bp GCAGCCCTCCGCTCCAGTTTGGAGATCAAGTCTGGCTaGGCAGCGGCAGGTCCCAAGGATGCCAACAGCTCG +
Preference number: 6 (lower is better)
Translates to: AALRSSLEIKSG*AAAGPKDANSS
Trigger: CGAGCTGTTGGCATCCTTGGGACCTGCCGCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp CGCTGCCAAGCCATGGCTCTGGCCCTCGTCCGAACTTaGGGAACAGCTCAGGATTGGCAACAGTTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: RCQAMALALVRT*GTAQDWQQLVP
Trigger: TGGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS GCA 72 bp GCCAGGGCGTTTTTGCAGAGCATGGAGAACGGGAGGTaGTGGGCAATGGTTTTCAGGCCCAGCCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: ARAFLQSMENGR*WAMVFRPSHSS
Trigger: GGAGGAGTGGCTGGGCCTGAAAACCATTGCCCAGCACCTCCCGTTCTCCATGCTCTGCAAAAACGCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp AGCGGCAGTGCTGGGCCAGGGCGTTTTTGCAGAGCATaGAGAACGGGAGGTGCTGGGCAATGGTTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SGSAGPGRFCRA*RTGGAGQWFSG
Trigger: GCCTGAAAACCATTGCCCAGCACCTCCCGTTCTCCATGCTCTGCAAAAACGCCCTGGCCCAGCACTGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp GATAGGGGTGGCTCTGCCAGGCCGTCCCCTCCATCATaGCTCAATGCCCTTCCTCCTTCTGATCCACCTGGT +
Preference number: 6 (lower is better)
Translates to: DRGGSARPSPPS*LNALPPSDPPG
Trigger: ACCAGGTGGATCAGAAGGAGGAAGGGCATTGAGCCATGATGGAGGGGACGGCCTGGCAGAGCCACCCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488265.1
CDS CAA 72 bp ACGCTGCCAAGCCATGGCTCTGGCCCTCGTCCGAACTaGCGGAACAGCTCAGGATTGGCAACAGTTGGTCCC +
Preference number: 6 (lower is better)
Translates to: TLPSHGSGPRPN*RNSSGLATVGP
Trigger: GGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CAA 72 bp GGACGACCTTTCCCCCACTTTGGCCCATTTGGGTCCTaGATCCAGGGTGCAGCCCTCCGCTCCAGTTTGGAG +
Preference number: 6 (lower is better)
Translates to: GRPFPHFGPFGS*IQGAALRSSLE
Trigger: CTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS CAA 72 bp CTATCCGCCTGGAACCGCTGTTCCGCTACCTCCAGTTaGTCCAAGCAGATGCCGTGGAGCCGCCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: LSAWNRCSATSS*SKQMPWSRPSL
Trigger: CAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACTGGAGGTAGCGGAACAGCGGTTCCAGGCGGATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp GCAGCCCTCCGCTCCAGTTTGGAGATCAAGTCTGGCTaGGCAGCGGCAGGTCCTGTTCTGAGAGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: AALRSSLEIKSG*AAAGPVLRGWR
Trigger: CCTCCATCCTCTCAGAACAGGACCTGCCGCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS CAA 90 bp CTCCGGAACCGGGCTGCCCAGATGGGGTCCCTCGCTGCCAAGGCATaGACACAGAACATGTGGGCCTTGCTCTTCGCGTGGTATTTGAGA +
Preference number: 6 (lower is better)
Translates to: LRNRAAQMGSLAAKA*TQNMWALLFAWYLR
Trigger: TCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCATCTGGGCAGCCCGGTTCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp GGCCCATTTGGGTCCTTGATCCAGGGTGCAGCCCTCCGCTCCAGTTaGGAGATCAAGTCTGGCTTGGCAGCGGCAGGTCCTGTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: GPFGSLIQGAALRSS*EIKSGLAAAGPVLR
Trigger: TCTCAGAACAGGACCTGCCGCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS CAA 90 bp TGGCAGGGATGTGGATGGGCACCCATACCCAGTGGTGCCACCAGCTaGTTGGAACCACAGAGCTCCTTCTGTTGCTGGCTCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: WQGCGWAPIPSGATS*LEPQSSFCCWLSST
Trigger: GGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGTATGGGTGCCCATCCACATCCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS TCA 72 bp CGGCCCAGTCTCCCTCGATGTGTCCACTGCCTGTACTaGGGTGGGAAAGGTAGGCTTTCTTCTGAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RPSLPRCVHCLY*GGKGRLSSEAG
Trigger: TCCCGCCTCAGAAGAAAGCCTACCTTTCCCACCTCAGTACAGGCAGTGGACACATCGAGGGAGACTGGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS TCA 72 bp GACGACCTTTCCCCCACTTTGGCCCATTTGGGTCCTTaGTCCAGGGTGCAGCCCTCCGCTCCAGTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: DDLSPTLAHLGP*SRVQPSAPVWR
Trigger: TCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS GCA 72 bp CCCCCACTTTGGCCCATTTGGGTCCTTGATCCAGGGTaGAGCCCTCCGCTCCAGTTTGGAGATCAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: PPLWPIWVLDPG*SPPLQFGDQVW
Trigger: CCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS GCA 72 bp CTTGAAGCTGGCGTTGAATTCTTCCTCTTTGGGCCCTaGCTGGTGACGGAGGCTCTCCAGTGCCACGTAGGC +
Preference number: 6 (lower is better)
Translates to: LEAGVEFFLFGP*LVTEALQCHVG
Trigger: GCCTACGTGGCACTGGAGAGCCTCCGTCACCAGGCAGGGCCCAAAGAGGAAGAATTCAACGCCAGCTTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GTGGCAGGGATGTGGATGGGCACCCATACCCAGTGGTaGCACCAGCTTGTTGGAACCACAGAGCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: VAGMWMGTHTQW*HQLVGTTELLL
Trigger: CAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGTATGGGTGCCCATCCACATCCCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS CCA 72 bp CTGGCCCTCGTCCGAACTTGCGGAACAGCTCAGGATTaGCAACAGTTGGTCCCAGTGGTGCCACCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: LALVRTCGTAQD*QQLVPVVPPAC
Trigger: ACAAGCTGGTGGCACCACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 72 bp ACGCAGTGGACAGGCAGCAGCTGCGGGATGACCTCCTaGAACTTTTCCACAAGGCCTCCTCTGCAGCTCAAC +
Preference number: 6 (lower is better)
Translates to: TQWTGSSCGMTS*NFSTRPPLQLN
Trigger: GTTGAGCTGCAGAGGAGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp TTCAGCTGTGGGGGTCGGTCTGCGTCAAACCTCTGCTaGAGGTACTCAATCCCCGTCAGGACTGTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: FSCGGRSASNLC*RYSIPVRTVLS
Trigger: GGAGAGGACAGTCCTGACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp AGGGCGTTTTTGCAGAGCATGGAGAACGGGAGGTGCTaGGCAATGGTTTTCAGGCCCAGCCACTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RAFLQSMENGRC*AMVFRPSHSSS
Trigger: GCTGGAGGAGTGGCTGGGCCTGAAAACCATTGCCCAGCACCTCCCGTTCTCCATGCTCTGCAAAAACGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp TCTGGCCCTCGTCCGAACTTGCGGAACAGCTCAGGATaGGCAACAGTTGGTCCCAGTGGTGCCACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SGPRPNLRNSSG*ATVGPSGATSL
Trigger: CAAGCTGGTGGCACCACTGGGACCAACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CAA 72 bp GGATGGGCACCCATACCCAGTGGTGCCACCAGCTTGTaGGAACCACAGAGCTCCTTCTGTTGCTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: GWAPIPSGATSL*EPQSSFCCWLS
Trigger: GCTGAGCCAGCAACAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGTATGGGTGCCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS CAA 90 bp CAGGGATGTGGATGGGCACCCATACCCAGTGGTGCCACCAGCTTGTaGGAACCACAGAGCTCCTTCTGTTGCTGGCTCAGCAGCACCCAT +
Preference number: 6 (lower is better)
Translates to: QGCGWAPIPSGATSL*EPQSSFCCWLSSTH
Trigger: ATGGGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGTATGGGTGCCCATCCACATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS CAA 90 bp TTCCCTGGAGGACGACCTTTCCCCCACTTTGGCCCATTTGGGTCCTaGATCCAGGGTGCAGCCCTCCGCTCCAGTTTGGAGATCAAGTCT +
Preference number: 6 (lower is better)
Translates to: FPGGRPFPHFGPFGS*IQGAALRSSLEIKS
Trigger: AGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAATGGGCCAAAGTGGGGGAAAGGTCGTCCTCCAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000478024.1
CDS CAA 90 bp TTGGAGAGCTTGGTCCTCTCATCGGTCCTGATTCGGTTCATGGCCTaGAACCCCCGCTCACAGCAAGAGGTGGAGATGGGCACACAGACC +
Preference number: 6 (lower is better)
Translates to: LESLVLSSVLIRFMA*NPRSQQEVEMGTQT
Trigger: GGTCTGTGTGCCCATCTCCACCTCTTGCTGTGAGCGGGGGTTCAAGGCCATGAACCGAATCAGGACCGATGAGAGGACCAAGCTCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp TTCTTCAGCTGTGGGGGTCGGTCTGCGTCAAACCTCTaGTGGAGGTACTCAATCCCCGTCAGGACTGTCCTC +
Preference number: 6 (lower is better)
Translates to: FFSCGGRSASNL*WRYSIPVRTVL
Trigger: GAGGACAGTCCTGACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp TCAATCCCCGTCAGGACTGTCCTCTCCCTATCCGCCTaGAACCGCTGTTCCGCTACCTCCAGTTTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SIPVRTVLSLSA*NRCSATSSLSK
Trigger: CTTGGACAAACTGGAGGTAGCGGAACAGCGGTTCCAGGCGGATAGGGAGAGGACAGTCCTGACGGGGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp GCCACGCCGTTCACAGCTGTCATCATGAGCATGTTGAGCACCTCGTaGGAGAGCTTGGTCCTCTCATCGGTCCTGATTCGGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: ATPFTAVIMSMLSTS*ESLVLSSVLIRFMA
Trigger: GGCCATGAACCGAATCAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAACGGCGTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GCCGTCTGCTCCTCATTCATGATCAGCCACGGAAACTaGACAAACCACGACTTCTGGATGGACCGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: AVCSSFMISHGN*TNHDFWMDRGF
Trigger: GAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS GCA 72 bp GCACCAGGAGACAGACCCAGGAGTCTAGCCCAGGCCTaGCAGATTGCCCCACTTCTCTTGACCATTTTAAGG +
Preference number: 6 (lower is better)
Translates to: APGDRPRSLAQA*QIAPLLLTILR
Trigger: CCTTAAAATGGTCAAGAGAAGTGGGGCAATCTGGCAGGCCTGGGCTAGACTCCTGGGTCTGTCTCCTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS CCA 72 bp GGCCATGGTGTCAAACACCTCCATGTTCTTCAGCTGTaGGGGTCGGTCTGCGTCAAACCTCTGCTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: GHGVKHLHVLQL*GSVCVKPLLEV
Trigger: TACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp ACGGCCACGCCGTTCACAGCTGTCATCATGAGCATGTaGAGCACCTCGTTGGAGAGCTTGGTCCTCTCATCG +
Preference number: 6 (lower is better)
Translates to: TATPFTAVIMSM*STSLESLVLSS
Trigger: CGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAACGGCGTGGCCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp TACTCCGTGACGGCCACGCCGTTCACAGCTGTCATCATGAGCATGTaGAGCACCTCGTTGGAGAGCTTGGTCCTCTCATCGGTCCTGATT +
Preference number: 6 (lower is better)
Translates to: YSVTATPFTAVIMSM*STSLESLVLSSVLI
Trigger: AATCAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAACGGCGTGGCCGTCACGGAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp CTCCCCTTGTGGGCTTCCCAAGTCAAAGGAGGGTGGTaGATAAGAGGCTCGGTGCGTCTTTACCCAAGGATG +
Preference number: 6 (lower is better)
Translates to: LPLWASQVKGGW*IRGSVRLYPRM
Trigger: CATCCTTGGGTAAAGACGCACCGAGCCTCTTATTCACCACCCTCCTTTGACTTGGGAAGCCCACAAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488265.1
CDS TCA 72 bp CCTGACGCAGATGAGGTTGGGAATGCCGATCTAAATTaGCAGTGGCAGGGATGTGGATGGGCACCCATACCC +
Preference number: 6 (lower is better)
Translates to: PDADEVGNADLN*QWQGCGWAPIP
Trigger: GGGTATGGGTGCCCATCCACATCCCTGCCACTGTCAATTTAGATCGGCATTCCCAACCTCATCTGCGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489820.5
CDS GCA 72 bp AAACACCTCCATGTTCTTCAGCTGTGGGGGTCGGTCTaGGTCAAACCTCTGCTGGAGGTACTCAATCCCCGT +
Preference number: 6 (lower is better)
Translates to: KHLHVLQLWGSV*VKPLLEVLNPR
Trigger: ACGGGGATTGAGTACCTCCAGCAGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp TGTTCCGCTACCTCCAGTTTGTCCAAGCAGATGCCGTaGAGCCGCCCATCCTTGAAGCTGGCGTTGAATTCT +
Preference number: 6 (lower is better)
Translates to: CSATSSLSKQMP*SRPSLKLALNS
Trigger: AGAATTCAACGCCAGCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACTGGAGGTAGCGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp AGTTTGTCCAAGCAGATGCCGTGGAGCCGCCCATCCTaGAAGCTGGCGTTGAATTCTTCCTCTTTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SLSKQMPWSRPS*KLALNSSSLGP
Trigger: AGGGCCCAAAGAGGAAGAATTCAACGCCAGCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp ATGGGGTCCCTCGCTGCCAAGGCATTGACACAGAACATGTGGGCCTaGCTCTTCGCGTGGTATTTGAGAGTCTCCACCTTGAATGGTCCT +
Preference number: 6 (lower is better)
Translates to: MGSLAAKALTQNMWA*LFAWYLRVSTLNGP
Trigger: AGGACCATTCAAGGTGGAGACTCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp CGCCGCACCTTCCTGCAGCTCGTTCAGCCTCTTGTTTaGGGACTGATAAAACTTGAAGACGGTGCGGATGTG +
Preference number: 6 (lower is better)
Translates to: RRTFLQLVQPLV*GLIKLEDGADV
Trigger: CACATCCGCACCGTCTTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAACGAGCTGCAGGAAGGTGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp GGGTATTCTCGGCAAGCAGAGCAGAACAGAGCCGTCTaGTCCTCATTCATGATCAGCCACGGAAACTGCACA +
Preference number: 6 (lower is better)
Translates to: GYSRQAEQNRAV*SSFMISHGNCT
Trigger: TGTGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGACGGCTCTGTTCTGCTCTGCTTGCCGAGAATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 72 bp TCAGCCACGGAAACTGCACAAACCACGACTTCTGGATaGACCGGGGCTTCAGAAGTTTCCTGTTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SATETAQTTTSG*TGASEVSCFFR
Trigger: CCGGAAGAAACAGGAAACTTCTGAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 72 bp GGAAGGGGATGTCCAGCTCATCCAGGGCAGAAACGATaGTCTCGAAGTACCCATCTGCTGTCTCACTGTAGA +
Preference number: 6 (lower is better)
Translates to: GRGCPAHPGQKR*SRSTHLLSHCR
Trigger: TCTACAGTGAGACAGCAGATGGGTACTTCGAGACCATCGTTTCTGCCCTGGATGAGCTGGACATCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp CTCGCTGCCAAGGCATTGACACAGAACATGTGGGCCTaGCTCTTCGCGTGGTATTTGAGAGTCTCCACCTTG +
Preference number: 6 (lower is better)
Translates to: LAAKALTQNMWA*LFAWYLRVSTL
Trigger: CAAGGTGGAGACTCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp GTCATCATGAGCATGTTGAGCACCTCGTTGGAGAGCTaGGTCCTCTCATCGGTCCTGATTCGGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: VIMSMLSTSLES*VLSSVLIRFMA
Trigger: GGCCATGAACCGAATCAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp TTCACAGCTGTCATCATGAGCATGTTGAGCACCTCGTTGGAGAGCTaGGTCCTCTCATCGGTCCTGATTCGGTTCATGGCCTTGAACCCC +
Preference number: 6 (lower is better)
Translates to: FTAVIMSMLSTSLES*VLSSVLIRFMALNP
Trigger: GGGGTTCAAGGCCATGAACCGAATCAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp ATGAGGTCGCTGGAGATCTCTGGAACGAGGGCAGTGTaGGGGGTGTCTTCCTTGATTTCAACCGTGTTGACA +
Preference number: 6 (lower is better)
Translates to: MRSLEISGTRAV*GVSSLISTVLT
Trigger: TGTCAACACGGTTGAAATCAAGGAAGACACCCCTCACACTGCCCTCGTTCCAGAGATCTCCAGCGACCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS GCA 72 bp TTGCCTAATATCACGGTCCCCGTGCTTTGGAGGAGCTaGAGGATCTTCTCAAAGTCATTCAGGGGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: LPNITVPVLWRS*RIFSKSFRGLE
Trigger: CTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATATTAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp CAAAACTGGCAAGTTCAATCCCACTTGGCCAGGCCATaGTGTCAAACACCTCCATGTTCTTCAGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: QNWQVQSHLARP*CQTPPCSSAVG
Trigger: CCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATGGCCTGGCCAAGTGGGATTGAACTTGCCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp GGAGTCACAGAGCTGAGACTGAAGGAGCCAGGAAGTTaGGCACCAGGGATGTTTCTGGAAAGCATTGTCAAG +
Preference number: 6 (lower is better)
Translates to: GVTELRLKEPGS*APGMFLESIVK
Trigger: CTTGACAATGCTTTCCAGAAACATCCCTGGTGCCCAACTTCCTGGCTCCTTCAGTCTCAGCTCTGTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS CAA 72 bp TTCACAGCTGTCATCATGAGCATGTTGAGCACCTCGTaGGAGAGCTTGGTCCTCTCATCGGTCCTGATTCGG +
Preference number: 6 (lower is better)
Translates to: FTAVIMSMLSTS*ESLVLSSVLIR
Trigger: CCGAATCAGGACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 90 bp CCCATCGAGAGGAGTCACAGAGCTGAGACTGAAGGAGCCAGGAAGTaGGGCACCAGGGATGTTTCTGGAAAGCATTGTCAAGGATATTGT +
Preference number: 6 (lower is better)
Translates to: PIERSHRAETEGARK*GTRDVSGKHCQGYC
Trigger: ACAATATCCTTGACAATGCTTTCCAGAAACATCCCTGGTGCCCAACTTCCTGGCTCCTTCAGTCTCAGCTCTGTGACTCCTCTCGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS GCA 72 bp TGCGATTGCGGTACTTGCCTAATATCACGGTCCCCGTaGTTTGGAGGAGCTGCAGGATCTTCTCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: CDCGTCLISRSP*FGGAAGSSQSH
Trigger: ATGACTTTGAGAAGATCCTGCAGCTCCTCCAAAGCACGGGGACCGTGATATTAGGCAAGTACCGCAATCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CAA 72 bp AGGAGTCACAGAGCTGAGACTGAAGGAGCCAGGAAGTaGGGCACCAGGGATGTTTCTGGAAAGCATTGTCAA +
Preference number: 6 (lower is better)
Translates to: RSHRAETEGARK*GTRDVSGKHCQ
Trigger: TTGACAATGCTTTCCAGAAACATCCCTGGTGCCCAACTTCCTGGCTCCTTCAGTCTCAGCTCTGTGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478024.1
CDS TCA 72 bp GCTCGTTCAGCCTCTTGTTTGAGGACTGATAAAACTTaGAGACGGTGCGGATGTGCCGGTCACACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: ARSASCLRTDKT*RRCGCAGHTSS
Trigger: TGAAGAAGTGTGACCGGCACATCCGCACCGTCTTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS CCA 72 bp ATGATCAGCCACGGAAACTGCACAAACCACGACTTCTaGATGGACCGGGGCTTCAGAAGTTTCCTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: MISHGNCTNHDF*MDRGFRSFLFL
Trigger: AAGAAACAGGAAACTTCTGAAGCCCCGGTCCATCCAGAAGTCGTGGTTTGTGCAGTTTCCGTGGCTGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223210.5
ENST00000460379.1
CDS CCA 72 bp GCATTGACACAGAACATGTGGGCCTTGCTCTTCGCGTaGTATTTGAGAGTCTCCACCTTGAATGGTCCTGTA +
Preference number: 6 (lower is better)
Translates to: ALTQNMWALLFA*YLRVSTLNGPV
Trigger: TACAGGACCATTCAAGGTGGAGACTCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp ATTACTAACCATGGGAACTGCCCAAACCATGACCTCTaGATGGAACGGGGCCTGTATGTCCTCTTGATTCTC +
Preference number: 6 (lower is better)
Translates to: ITNHGNCPNHDL*MERGLYVLLIL
Trigger: GAGAATCAAGAGGACATACAGGCCCCGTTCCATTCAGAGGTCATGGTTTGGGCAGTTCCCATGGTTAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp GAGCTGCAGGATCTTCTCAAAGTCATTCAGGGGCCTTaGGTGGTATGCAATGGAGTAGGCGGCATTGAAAAA +
Preference number: 6 (lower is better)
Translates to: ELQDLLKVIQGP*VVCNGVGGIEK
Trigger: TTTTTCAATGCCGCCTACTCCATTGCATACCACTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223210.5
CDS TCA 72 bp AAAATGTCTGTCTCTCCCACAAACGTGCTAGGCCCTTaGAAGCAGAGACCATGGATCAGCTGTGTTCATCTG +
Preference number: 6 (lower is better)
Translates to: KMSVSPTNVLGP*KQRPWISCVHL
Trigger: CAGATGAACACAGCTGATCCATGGTCTCTGCTTTCAAGGGCCTAGCACGTTTGTGGGAGAGACAGACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488265.1
CDS TCA 72 bp CTTCTCTTGACCATTTTAAGGGGAGAAGAGAAAGGGTaGTGTGTGAATTTGCATGCAATTAAGGTAGATACG +
Preference number: 6 (lower is better)
Translates to: LLLTILRGEEKG*CVNLHAIKVDT
Trigger: CGTATCTACCTTAATTGCATGCAAATTCACACATCACCCTTTCTCTTCTCCCCTTAAAATGGTCAAGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489820.5