RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF853 (Homo sapiens)

Ensembl gene IDs: ENSG00000236609

Ensembl transcript IDs: ENST00000457543.4

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTaGTGCGGGAGAAATCTGCCCTGGTCTCCCCGGGCCGGCCCCTGG +
Preference number: 1 (lower is better)
Translates to: NGTVSAQAALQTSTA*CGRNLPWSPRAGPW
Trigger: CCAGGGGCCGGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACCAGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp AGGCCAAGAAGCTGCCTCCGATGCCCGCCGGAGCCCCTGGTTCCCTaGAGGGAAGGTTTTACCTTCCACCCGGAGCAGGACTTCCTGGCT +
Preference number: 1 (lower is better)
Translates to: RPRSCLRCPPEPLVP*REGFTFHPEQDFLA
Trigger: AGCCAGGAAGTCCTGCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGCATCGGAGGCAGCTTCTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp AGCAGCAGAGGCCAAGAAGCTGCCTCCGATGCCCGCCGGAGCCCCTaGTTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGCAGGACT +
Preference number: 1 (lower is better)
Translates to: SSRGQEAASDARRSP*FPGGKVLPSTRSRT
Trigger: AGTCCTGCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGCATCGGAGGCAGCTTCTTGGCCTCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp GCAGCCCTCCAAACCTCCACAGCCTGGTGCGGGAGAAATCTGCCCTaGTCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAA +
Preference number: 1 (lower is better)
Translates to: AALQTSTAWCGRNLP*SPRAGPWVASEKHE
Trigger: TTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACCAGGCTGTGGAGGTTTGGAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp TTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGCAGGACTTCCTaGCTTGGATTTGCACATCGACCCGGTGAGCGCTCTGACCCTGTG +
Preference number: 1 (lower is better)
Translates to: FPGGKVLPSTRSRTS*LGFAHRPGERSDPV
Trigger: CACAGGGTCAGAGCGCTCACCGGGTCGATGTGCAAATCCAAGCCAGGAAGTCCTGCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 90 bp GGGACCCTCCTTCCAGACCTTGGAGAGCTCTCCCAGAAGGCCCTCTaGTTCAGCCACAGGCTCTTATTCCAGAGGACATTAATGCGGGCT +
Preference number: 1 (lower is better)
Translates to: GTLLPDLGELSQKAL*FSHRLLFQRTLMRA
Trigger: AGCCCGCATTAATGTCCTCTGGAATAAGAGCCTGTGGCTGAAGCAGAGGGCCTTCTGGGAGAGCTCTCCAAGGTCTGGAAGGAGGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 90 bp TCGTCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTaGTCAGGCAGCCCTCCAAACCTCCACAGCCTGGTGCGGGAGAAA +
Preference number: 1 (lower is better)
Translates to: SSQIFFPQPQQWHSV*SGSPPNLHSLVREK
Trigger: TTTCTCCCGCACCAGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp TGCTCCCAAACGTCGTCTCAGATATTCTTTCCCCAGCCCCAGCAATaGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTG +
Preference number: 1 (lower is better)
Translates to: CSQTSSQIFFPQPQQ*HSVCSGSPPNLHSL
Trigger: CAGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGACGACGTTTGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp ATCGAAGATTTTCCACGTGTGTCTCACCACGTCTTGATTCCCTGGTaGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTG +
Preference number: 1 (lower is better)
Translates to: IEDFPRVSHHVLIPW*VSSPRPVSLIVSPL
Trigger: CAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 90 bp AGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTTGATTCCCTaGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCA +
Preference number: 1 (lower is better)
Translates to: RIEDFPRVSHHVLIP*WVSSPRPVSLIVSP
Trigger: TGGCGAGACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 90 bp TCTTGGAAAGTATTTTCAAGGCAAATGCCTCTGAGGACGATTCGATaGCTTGGTCAGTTTCTACATAGTGCAAACAAGTTTGCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: SWKVFSRQMPLRTIR*LGQFLHSANKFASS
Trigger: GGAGGAAGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAATACTTTCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR TCA 90 bp CTGATGAATTTTCATCTTGGAAAGTATTTTCAAGGCAAATGCCTCTaGGGACGATTCGATGCCTTGGTCAGTTTCTACATAGTGCAAACA +
Preference number: 1 (lower is better)
Translates to: LMNFHLGKYFQGKCL*GRFDALVSFYIVQT
Trigger: TGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAATACTTTCCAAGATGAAAATTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR GCA 90 bp CAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCGGTGCGGGAGAAATCTaGCCTGGTCTCCCCGGGCCG +
Preference number: 2 (lower is better)
Translates to: QPQQWHSVCSGSPPNLHSGAGEI*PGLPGP
Trigger: CGGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACC...GCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp GCCCGCCGGAGCCCCTGGTTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGCCACGTCTTGATTCCCTaGTGGGTGTCCAGTCCTCGG +
Preference number: 2 (lower is better)
Translates to: ARRSPWFPGGKVLPSTRSHVLIP*WVSSPR
Trigger: CCGAGGACTGGACACCCACCAGGGAATCAAGACGTG...GCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp AGCATTGCTCCCAAACGTCGTCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCTCAGGTGGAGGCGGGTaGGGGGTCCCCTCCCGGCCA +
Preference number: 2 (lower is better)
Translates to: SIAPKRRLRYSFPSPSNGSGGGG*GVPSRP
Trigger: TGGCCGGGAGGGGACCCCCCACCCGCCTCCACCTGA...GCCATTGCTGGGGCTGGGGAAAGAATATCTGAGACGACGTTTGGGAGCAATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp CTACCCCGGAGCTCCTTCTGGGGGACCCTCCTTCCAGACCTTGGAGAGCTCTCCGTCTTGATTCCCTGGTaGGTGTCCAGTCCTCGGCCA +
Preference number: 2 (lower is better)
Translates to: LPRSSFWGTLLPDLGELSVLIPW*VSSPRP
Trigger: TGGCCGAGGACTGGACACCCACCAGGGAATCAAGAC...GGAGAGCTCTCCAAGGTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTCCTCCTTCCAGACCTTaGAGAGCTCTCCCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPPPSRP*RALPEG
Trigger: GCCTTCTGGGAGAGCTCTCCAAGGTCTGGAAGGAGG...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR TCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTCGCCTCCAGCGCCCATaGACCCGGGTCAAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGRLQRP*TRVKEL
Trigger: AAGCTCCTTGACCCGGGTTCATGGGCGCTGGAGGCG...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp CGACCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGACGGAGGGAAAACCTTTaGCAGACCCCTCAAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RPGERSDPVLMNTGVFIRRRENL*QTPQRA
Trigger: TGCCCTTTGAGGGGTCTGCCAAAGGTTTTCCCTCCG...TCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTCCCCGGAGCTCCTTCTaGGGGACCCTCCTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSPRSSF*GTLLPD
Trigger: GTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGG...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTTCTCTTTTGGCGGATaGATTTTTCTGGCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHFSFGG*IFLAVK
Trigger: TTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp TTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCAGGTCCACTTCTCTTTTaGCGGATGGATTTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: LIPWWVSSPRPVSLIVSPGPLLF*RMDFSG
Trigger: GCCAGAAAAATCCATCCGCCAAAAGAGAAGTGGACC...TGGCGAGACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 90 bp ATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTaGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATC +
Preference number: 2 (lower is better)
Translates to: IFTRIEDFPRVSHHV*IPWWVSSPRPVSLI
Trigger: GATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR GCA 90 bp CTGAGGACGATTCGATGCCTTGGTCAGTTTCTACATAGTGCAAACAAGTTTGCTCAAACGTGTCCCGTGTaGTGTTTCAGCCCCGGTCCA +
Preference number: 2 (lower is better)
Translates to: LRTIRCLGQFLHSANKFAQTCPV*CFSPGP
Trigger: TGGACCGGGGCTGAAACAGCACACGGGACACGTTTG...AGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTGAGCCCCTGGTTCCCTaGAGGGAAGGTTTTACCTTC +
Preference number: 2 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSEPLVP*REGFTF
Trigger: GAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTC...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 90 bp GGACGATTCGATGCCTTGGTCAGTTTCTACATAGTGCAAACAAGTTaGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGGAT +
Preference number: 2 (lower is better)
Translates to: GRFDALVSFYIVQTS*LPPRISPCDHFHQD
Trigger: ATCCTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp CAAACCTCCACAGCCTGGTGCGGGAGAAATCTGCCCTaGTCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAG +
Preference number: 3 (lower is better)
Translates to: QTSTAWCGRNLP*SPRAGPWVASE
Trigger: CTCAGATGCTACCCAGGGGCCGGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACCAGGCTGTGGAGGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp GTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTaGTGCGGGAGAAATCTGCCCTGGTCTCCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: VSAQAALQTSTA*CGRNLPWSPRA
Trigger: GGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACCAGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp GGGAGAAATCTGCCCTGGTCTCCCCGGGCCGGCCCCTaGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTC +
Preference number: 3 (lower is better)
Translates to: GRNLPWSPRAGP*VASEKHEAGGV
Trigger: GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGACCAGGGCAGATTTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR TCA 72 bp TACTCCAGGGATATTCCAGGACGCCTCCAGCGCCCATaGACCCGGGTCAAGGAGCTTTTCAGGTGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: YSRDIPGRLQRP*TRVKELFRWRR
Trigger: CCGCCTCCACCTGAAAAGCTCCTTGACCCGGGTTCATGGGCGCTGGAGGCGTCCTGGAATATCCCTGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CAA 90 bp GCCCGCCGGAGCCCCTGGTTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGCATAGTGCAAACAAGTTaGCTTCCTCCCCGAATTTCT +
Preference number: 3 (lower is better)
Translates to: ARRSPWFPGGKVLPSTRSIVQTS*LPPRIS
Trigger: AGAAATTCGGGGAGGAAGCAAACTTGTTTGCACTAT...GCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 72 bp ATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTaGTCAGGCAGCCCTCCAAACCTCCACAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: IFFPQPQQWHSV*SGSPPNLHSLV
Trigger: CACCAGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp GGGAAGGTTTTACCTTCCACCCGGAGCAGGACTTCCTaGCTTGGATTTGCACATCGACCCGGTGAGCGCTCT +
Preference number: 3 (lower is better)
Translates to: GKVLPSTRSRTS*LGFAHRPGERS
Trigger: AGAGCGCTCACCGGGTCGATGTGCAAATCCAAGCCAGGAAGTCCTGCTCCGGGTGGAAGGTAAAACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR TCA 72 bp GGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTTaGTTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: GSKIFHVCLTTS*FPGGCPVLGQC
Trigger: ACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 72 bp CTTCCAGACCTTGGAGAGCTCTCCCAGAAGGCCCTCTaGTTCAGCCACAGGCTCTTATTCCAGAGGACATTA +
Preference number: 3 (lower is better)
Translates to: LPDLGELSQKAL*FSHRLLFQRTL
Trigger: TAATGTCCTCTGGAATAAGAGCCTGTGGCTGAAGCAGAGGGCCTTCTGGGAGAGCTCTCCAAGGTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp TTTCCACGTGTGTCTCACCACGTCTTGATTCCCTGGTaGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTC +
Preference number: 3 (lower is better)
Translates to: FPRVSHHVLIPW*VSSPRPVSLIV
Trigger: GACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CCA 72 bp GATTTTCCACGTGTGTCTCACCACGTCTTGATTCCCTaGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATC +
Preference number: 3 (lower is better)
Translates to: DFPRVSHHVLIP*WVSSPRPVSLI
Trigger: GATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CAA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGGTGTCTCACCACGTCTaGATTCCCTGGTGGGTGTCC +
Preference number: 3 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQVSHHV*IPWWVS
Trigger: GGACACCCACCAGGGAATCAAGACGTGGTGAGACAC...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CAA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTCTTCCTGGCTTGGATTaGCACATCGACCCGGTGAGC +
Preference number: 3 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSLPGLD*HIDPVS
Trigger: GCTCACCGGGTCGATGTGCAAATCCAAGCCAGGAAG...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR GCA 72 bp TGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATTaGTCCCAAACGTCGTCTCAGATATTCTTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: CPRRLGERGKEH*SQTSSQIFFPQ
Trigger: CTGGGGAAAGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR-3UTR CAA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTCGCTCTGACCCTGTGTaGATGAACACAGGCGTTTTC +
Preference number: 3 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSRSDPV*MNTGVF
Trigger: GAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCG...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR TCA 72 bp TTTCATCTTGGAAAGTATTTTCAAGGCAAATGCCTCTaGGGACGATTCGATGCCTTGGTCAGTTTCTACATA +
Preference number: 3 (lower is better)
Translates to: FHLGKYFQGKCL*GRFDALVSFYI
Trigger: TATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAATACTTTCCAAGATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp GCCCGCCGGAGCCCCTGGTTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGCGCCAAGGGAAGGGGCTaGGAGGAGCGGCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ARRSPWFPGGKVLPSTRSAKGRG*EERPSR
Trigger: TCTGCTCGGCCGCTCCTCTCAGCCCCTTCCCTTGGC...GCTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp TCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTCCCCACCGCTGCCACCTaGGAGGGTGTCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPRAGPWVASEKHEAGGVPTAAT*EGVRPW
Trigger: CCAGGGCCTGACACCCTCTCAGGTGGCAGCGGTGGG...GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTCGCTCCGCCGCCCCCTaGGGCTGGCACCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPRSAAP*GWHQFQ
Trigger: CTGGAACTGGTGCCAGCCGCAGGGGGCGGCGGAGCG...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTCCTCCCGGGCAGCCTCTaGGCTAGGGAGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPRAGPWVASEKHEAGGVLPGSL*AREVWS
Trigger: TGACCACACCTCCCTAGCGCAGAGGCTGCCCGGGAG...GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TGCCCGCCGGAGCCCCTGGTTCCCTGGAGGGAAGGTTTTACCTTCCACCCGGAGTGCCGTTCCAGCTCCTaGTGCCGCTCCAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPPEPLVPWREGFTFHPECRSSS*CRSNSC
Trigger: GCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACGGCA...CTCCGGGTGGAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTCCGGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTCTCCAGCTGCACCTCCTaGTGCTGGGCGCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRAGPWVASEKHEAGGVSSCTS*CWAPSS
Trigger: GGAGCTAGGCGCCCAGCAGCAGGAGGTGCAGCTGGA...GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCAGCTGCAGCTCCGGCTaGACGGGGGTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPQQWHSVCSGSPPNLHSSCSSG*TGVSSS
Trigger: GCTGGAGCTGACCCCCGTGCAGCCGGAGCTGCAGCT...GCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTGGTGCGGGAGAAATCTaGCCTGGTCTCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPGAGEI*PGLPGP
Trigger: CGGCCCGGGGAGACCAGGGCAGATTTCTCCCGCACC...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTTCTCTTTTGGCACCACGGCCGGCGCTaGCACGGCGGGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GRQTCPVCCFSPGPLLFWHHGRR*HGGQHH
Trigger: ATGGTGCTGCCCGCCGTGGCAGCGCCGGCCGTGGTG...CCAAAAGAGAAGTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTCCCCGGGCCGGCCCCTaGGTAGCATCTGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPPRAGP*VASEKH
Trigger: ATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGG...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCGCACTCCCCGCAGATaGTCGGCCGGTCCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSRTPRR*SAGPER
Trigger: GCGCTCGGGACCGGCCGACCATCTGCGGGGAGTGCG...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTCTCACCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTGACTGGGGGCAGAGGTaGCGGGCAGCCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSPRLDSLVGVQSSASVIDWGQR*RAASSL
Trigger: CAGGGAGGAGGCTGCCCGCCACCTCTGCCCCCAGTC...AATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp TTCCCGGAGGGAAAACCTTTGGCAGACCCCTCAAAGGGCAGACAAACGTGTCCCGCGCCGAGCTCTCGCTaGAGCGCTTGGCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: FPEGKPLADPSKGRQTCPAPSSR*SAWRSR
Trigger: CCTACTGCGCCAAGCGCTTCAGCGAGAGCTCGGCGC...GGGACACGTTTGTCTGCCCTTTGAGGGGTCTGCCAAAGGTTTTCCCTCCGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACGGTTGGAGGAGACGCTaGAGCGCTTGCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHGWRRR*SACHSP
Trigger: GGGACTGTGGCAAGCGCTTCAGCGTCTCCTCCAACC...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTGCGCTAGGGAGGTGTaGTCAGCAGAGGCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHCAREV*SAEAAR
Trigger: CCTCGCAGCCTCTGCTGACCACACCTCCCTAGCGCA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGGCGGGCAGCACCATaGGCTCCTGCACCACCACGT +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPRRAAP*APAPPR
Trigger: ACGTGGTGGTGCAGGAGCTCATGGTGCTGCCCGCCG...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATAGCTGCACCTCCTGCTaGTGGGCGCCTAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHSCTSC*WAPSST
Trigger: GGTGGAGCTAGGCGCCCAGCAGCAGGAGGTGCAGCT...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATCAGAGGCCAAGAAGCTaGCTCCGATGCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHQRPRS*LRCPPE
Trigger: CTCCGGCGGGCATCGGAGGCAGCTTCTTGGCCTCTG...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTACCCCGGGGGCTTTCTaGGCACTCCGGAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRTPGAF*ALRRVH
Trigger: GTGGACCCTCCGGAGTGCCCAGAAAGCCCCCGGGGT...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTGTCTTGATTCCCTGGTaGGTGTCCAGTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPVLIPW*VSSPRP
Trigger: TGGCCGAGGACTGGACACCCACCAGGGAATCAAGAC...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCGCCTCCAGCGCCCATaGACCCGGGTCAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSRLQRP*TRVKEL
Trigger: AAGCTCCTTGACCCGGGTTCATGGGCGCTGGAGGCG...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCCACTGGGGCCGAGACTaGTGGCCGCTGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: APDDLVNVVKSIAPKRRLHWGRD*WPLWTA
Trigger: AGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTG...GAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CTACCCCGGAGCTCCTTCTGGGGGACCCTCCTTCCAGACCTTGGAGAGCTCTCCTGTTGTTGCCCATCTTaGTGCGGCTGCTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPRSSFWGTLLPDLGELSCCCPS*CGCCCS
Trigger: ACTGCAACAGCAGCCGCAGCAAGATGGGCAACAACA...GGAGAGCTCTCCAAGGTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTTGCCGCTCCAACTCCTaGCGCTGCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRCRSNS*RCCSSS
Trigger: GGAGCTGGAGCAGCAGCGGCAGGAGTTGGAGCGGCA...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTGCTGCAGCTCCTCCTaGAGTTTGAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHCCSSS*SLSCSC
Trigger: GCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCAGCA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTGTGTGGATGCGTTGGTaGGTCACCAGATTCGAGTGC +
Preference number: 4 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPVWMRW*VTRFEC
Trigger: GCACTCGAATCTGGTGACGCACCAACGCATCCACAC...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTAGAAGCTGCCTCCGATaGCCGCCGGAGCCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRRSCLR*PPEPLV
Trigger: AACCAGGGGCTCCGGCGGGCATCGGAGGCAGCTTCT...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGGCCGAGCAGAAGTTaGTGGAGACTCTCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPRPSRS*WRLSGG
Trigger: CCCGCCGGAGAGTCTCCACCAACTTCTGCTCGGCCG...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTCTCACCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTCCTCAGCGATTTCACTaGCCCCCACTGGGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: VSPRLDSLVGVQSSASVIPQRFH*PPLGPR
Trigger: TCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGG...AATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCCCGGAGCTCCTTCTaGGGGACCCTCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSPRSSF*GTLLPD
Trigger: GTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGG...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATCCCCAGCCCCAGCAATaGCACAGTGTCTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHPQPQQ*HSVCSG
Trigger: GCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGG...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGTTCGTAGTAAGTCCAGTTCCACGCCCTCTGGGCTaGCGAGGTCGCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VINRLATGGFSSFVVSPVPRPLG*RGRPGP
Trigger: TGGCCCAGGGCGACCTCGGCAGCCCAGAGGGCGTGG...AACTGGACTTACTACGAACGAGGAAAAACCCCCAGTGGCGAGACGATTAATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTCTGTGGCTGTAACTGTTaGTGCTGGTGCATTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPRAGPWVASEKHEAGGVCGCNC*CWCISC
Trigger: GCAGCTAATGCACCAGCAGCAACAGTTACAGCCACA...GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCTGGGGCCGAGACTGCTaGCCGCTGTGGACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSWGRDC*PLWTAV
Trigger: AACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCA...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGAATTTGCACCTCCTGCTGCTaGGCGCCTAGCTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: PGERSDPVLMNTGVFIRICTSCC*APSSTG
Trigger: CCCGGTGGAGCTAGGCGCCCAGCAGCAGGAGGTGCA...AATTCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGTTCGTAGTAAGTCCAGTTTCAGGTGGAGGCGGGTaGGGGGTCCCCTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: VINRLATGGFSSFVVSPVSGGGG*GVPSRP
Trigger: TGGCCGGGAGGGGACCCCCCACCCGCCTCCACCTGA...AACTGGACTTACTACGAACGAGGAAAAACCCCCAGTGGCGAGACGATTAATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACGAGCCCCTGGTTCCCTaGAGGGAAGGTTTTACCTTC +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHEPLVP*REGFTF
Trigger: GAAGGTAAAACCTTCCCTCCAGGGAACCAGGGGCTC...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCTGCTGCAATTGTTCCTaGTGCTGTTGCAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPQQWHSVCSGSPPNLHSCCNCS*CCCNSC
Trigger: GCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCA...GCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTTCTCTTTTGGAGCTGTTGCTCCAGCTaGTGCAGCTCCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRQTCPVCCFSPGPLLFWSCCSS*CSSSCS
Trigger: ACTGCAGGAGGAGCTGCAGCAGCTGGAGCAACAGCT...CCAAAAGAGAAGTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTAGGGTCCACGCCCTCTaGGCTGCCGAGGTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PCDHFHQDRRFSTCVSPRRVHAL*AAEVAL
Trigger: CAGGGCGACCTCGGCAGCCCAGAGGGCGTGGACCCT...ACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 72 bp AGGTTTTACCTTCCACCCGGAGCAGGACTTCCTGGCTaGGATTTGCACATCGACCCGGTGAGCGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: RFYLPPGAGLPG*DLHIDPVSALT
Trigger: GGTCAGAGCGCTCACCGGGTCGATGTGCAAATCCAAGCCAGGAAGTCCTGCTCCGGGTGGAAGGTAAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACGGCTGCTGTTCTAACTaGTGCAGTTGCAACTCTCGT +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHGCCSN*CSCNSR
Trigger: ACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCC...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTTCTCTTTTGGGTCTGTAACTGCTCCTaGTGCTGCTGCAACCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRQTCPVCCFSPGPLLFWVCNCS*CCCNRC
Trigger: ACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGAC...CCAAAAGAGAAGTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTGCTGCAATACCTGTTaGTCTTGTGCTTGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHCCNTC*SCACCV
Trigger: GACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTGTAGCAGCTGCTGCTaGTGTAACTGTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHCSSCC*CNCSCC
Trigger: ACAGCAGGAACAGTTACAGCAGCAGCAGCTGCTACA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGTTCGTAGTAAGTCCAGTTGGCACCAGTTCCAGCTaGAGCTCCGGCTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: VINRLATGGFSSFVVSPVGTSSS*SSGCTG
Trigger: CCCCGTGCAGCCGGAGCTGCAGCTGGAACTGGTGCC...AACTGGACTTACTACGAACGAGGAAAAACCCCCAGTGGCGAGACGATTAATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCGTCACCAGATTCGAGTaGTGCGAGAAGCCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSVTRFE*CEKPLP
Trigger: CGGCAAGGGCTTCTCGCAGCACTCGAATCTGGTGAC...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TCTCCCCGGGCCGGCCCCTGGGTAGCATCTGAGAAGCATGAAGCTGGTGGAGTCCCCCGAATTTCTCCTTaGGATCATTTTCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: SPRAGPWVASEKHEAGGVPRISP*DHFHQD
Trigger: ATCCTGGTGAAAATGATCGCAAGGAGAAATTCGGGG...GACTCCACCAGCTTCATGCTTCTCAGATGCTACCCAGGGGCCGGCCCGGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGGCCGCCCCCTGCGGCTaGCACCAGTTCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQAAPCG*HQFQLQ
Trigger: CTGCAGCTGGAACTGGTGCCAGCCGCAGGGGGCGGC...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CGACCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGACACGTCTTGATTCCCTaGTGGGTGTCCAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RPGERSDPVLMNTGVFIRHVLIP*WVSSPR
Trigger: CCGAGGACTGGACACCCACCAGGGAATCAAGACGTG...TCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCCTCCTTCCAGACCTTaGAGAGCTCTCCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRPPSRP*RALPEG
Trigger: GCCTTCTGGGAGAGCTCTCCAAGGTCTGGAAGGAGG...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGGGGAGAAATCTGCCCTaGTCTCCCCGGGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQGRNLP*SPRAGP
Trigger: GGGGCCGGCCCGGGGAGACCAGGGCAGATTTCTCCC...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp GAACCTGGTATTTTCTCAGGGAATCCGGAAGATGATGATGATGATGATGGTGGAGCAGAGGCTGCGAGGTaGAGGCCACGGCGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPGIFSGNPEDDDDDDGGAEAAR*RPRRAA
Trigger: GGCTGCACGCCGTGGCCTTCACCTCGCAGCCTCTGC...TCCACCATCATCATCATCATCATCTTCCGGATTCCCTGAGAAAATACCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTTGTCTCACCACGTCTTaGTTCCCTGGTGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPCLTTS*FPGGCP
Trigger: TGGACACCCACCAGGGAATCAAGACGTGGTGAGACA...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CGACCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGATGTAACTGCTCCTGCTaGTGCTGCAACCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RPGERSDPVLMNTGVFIRCNCSC*CCNRCC
Trigger: GCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACA...TCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCAACTGTTCCTGCTGTTaGTGTAACAGCTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QPQQWHSVCSGSPPNLHSNCSCC*CNSCCS
Trigger: AGAGCAACAGCTGTTACAGCAACAGCAGGAACAGTT...GCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTTGCTGTAACTGTGCCTaGTGCTGTTCCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRCCNCA*CCSSSC
Trigger: GCAGCTGCTGGAACAGCAGCAGGCACAGTTACAGCA...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ACCCCTCAAAGGGCAGACAAACGTGTCCCGTGTGCTGTTTCAGCCCCGGTCCACTGCAATTGTTCCTGCTaGTGTTGCAACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPQRADKRVPCAVSAPVHCNCSC*CCNSCC
Trigger: ACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCA...GTGGACCGGGGCTGAAACAGCACACGGGACACGTTTGTCTGCCCTTTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCTCCAGGGGAGGAGGCTaGAGTTGTTGCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: APDDLVNVVKSIAPKRRLSRGGG*SCCCCN
Trigger: ATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGA...GAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGTTCGTAGTAAGTCCAGTTCGTTCCAGCTCCTGCTaGCGCTCCAACTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VINRLATGGFSSFVVSPVRSSSC*RSNSCR
Trigger: GCGGCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACG...AACTGGACTTACTACGAACGAGGAAAAACCCCCAGTGGCGAGACGATTAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCAGTGGCTGTAGCGGCCTaGTCCGCGCGGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSVAVAA*SARAGP
Trigger: TGGCCCAGCCCGCGCGGAGCAGGCCGCTACAGCCAC...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCATCCCAGAAGGCCCTCTaGTTCAGCCACAGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LIPWWVSSPRPVSLIVSPSQKAL*FSHRLL
Trigger: TAAGAGCCTGTGGCTGAAGCAGAGGGCCTTCTGGGA...TGGCGAGACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp ATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCTCCCGGGAGTCGGCTGGTaGAGCATTTCCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MMMMMVEAFYSRDIPGRLPGVGW*SISCSR
Trigger: CCGGGAGCAGGAAATGCTCCACCAGCCGACTCCCGG...GAGGCGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp ATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCTCTGCAGCTGGCGCTCGTaGCGGCGGATCTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: MMMMMVEAFYSRDIPGRLCSWRS*RRICTL
Trigger: CAAGGTGCAGATCCGCCGCCACGAGCGCCAGCTGCA...GAGGCGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCAGGACTTCCTGGCTTaGATTTGCACATCGACCCGG +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRQDFLA*ICTSTR
Trigger: CCGGGTCGATGTGCAAATCCAAGCCAGGAAGTCCTG...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 72 bp AGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTaGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RIEDFPRVSHHV*IPWWVSSPRPV
Trigger: CACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 72 bp CAACTGCTGCAGCTCACAACCCCTGCCCCAGACGACTaGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGT +
Preference number: 4 (lower is better)
Translates to: QLLQLTTPAPDD*VNVVKSIAPKR
Trigger: ACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCAAGGCAAATGCCTCTaGGGACGATTCGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSQGKCL*GRFDAL
Trigger: CAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTG...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTAGGTCAAGCAGGAAGTaGCTGGGGGCAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGRSSRK*LGAEVA
Trigger: CGCCACCTCTGCCCCCAGTCACTTCCTGCTTGACCT...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTGTGGTCAGCAGAGGCTaGGAGGTGAAGGCCACGGCG +
Preference number: 4 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSVVSRG*EVKATA
Trigger: CGCCGTGGCCTTCACCTCGCAGCCTCTGCTGACCAC...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTTCTAACTGCTGCAGTTaGAACTCTCGTTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRSNCCS*NSRCPG
Trigger: GCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGA...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTTGTTGCCCATCTTGCTaGGGCTGCTGTTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPCCPSC*GCCCSS
Trigger: AGAACTGCAACAGCAGCCGCAGCAAGATGGGCAACA...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTCTCACCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTTGCTGTAGCTGTTCCTaGTGCTGCAATACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VSPRLDSLVGVQSSASVICCSCS*CCNTCC
Trigger: GCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCA...AATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATTGCTGTTGTAGCAGCTaGTGCTGCTGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHCCCSS*CCCNCS
Trigger: GGAACAGTTACAGCAGCAGCAGCTGCTACAACAGCA...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTTCGTGGCGGCGGATCTaGACCTTGTGTCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGSWRRI*TLCRKR
Trigger: GCGCTTCCGACACAAGGTGCAGATCCGCCGCCACGA...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GATGATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCGAGCAGAAGTTGGTaGAGACTCTCCGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: DDDDDDGGSLLLQGYSRTPSRSW*RLSGGG
Trigger: GCCCCCGCCGGAGAGTCTCCACCAACTTCTGCTCGG...CGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGGAGCAGGACTTCCTaGCTTGGATTTGCACATCGA +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPRSRTS*LGFAHR
Trigger: TCGATGTGCAAATCCAAGCCAGGAAGTCCTGCTCCG...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTTCTGGTTTCAGTTCCTaGTGGTGCACGGATTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRSGFSS*WCTDWC
Trigger: ACACCAATCCGTGCACCATCAGGAACTGAAACCAGA...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTTCTCGCTCCCACCGCTaGCACCTGAGAGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSSRSHR*HLRGCQ
Trigger: CTGACACCCTCTCAGGTGGCAGCGGTGGGAGCGAGA...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATTGCTGGTGCATTAGCTaGAGTTCTGGTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHCWCIS*SSGFSS
Trigger: GGAACTGAAACCAGAACTGCAGCTAATGCACCAGCA...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp TTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCAAACAGCTGCTGTTGCTaGTGCTGCTGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: LIPWWVSSPRPVSLIVSPNSCCC*CCCNCS
Trigger: GGAACAGTTACAGCAGCAGCAGCAACAGCAGCTGTT...TGGCGAGACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp AGCATTGCTCCCAAACGTCGTCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCGGCTGCAGTTGTTGCTaGTGCAATTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIAPKRRLRYSFPSPSNGGCSCC*CNCSCC
Trigger: GCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCC...GCCATTGCTGGGGCTGGGGAAAGAATATCTGAGACGACGTTTGGGAGCAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTTCAAGGCAAATGCCTCTGAGGACGATTCGATGCCTTGGTCAGTTTCTACAAGCTGCAGCTGCCGCTaGTCCTGCTGCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IFKANASEDDSMPWSVSTSCSCR*SCCRSS
Trigger: GCTGGAACGGCAGCAGGAGCAGCGGCAGCTGCAGCT...TGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGTCACAGCGCCTTGTCTaGGGGCGCAGTGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQSQRLV*GRSGCS
Trigger: GCTACAGCCACTGCGCCCGCAGACAAGGCGCTGTGA...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTTTCCCGGGAGTCGGCTaGTGGAGCATTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGFPGVG*WSISCS
Trigger: GGAGCAGGAAATGCTCCACCAGCCGACTCCCGGGAA...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTGCACGAAGGTCTCGGTaGCTGGCCCCACTTCCATCC +
Preference number: 4 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSARRSR*LAPLPS
Trigger: GGATGGAAGTGGGGCCAGCCACCGAGACCTTCGTGC...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCAGTGTGCGTGGCCTGGTaGCGCACCAGGTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSVCVAW*RTRSVL
Trigger: CAGCACGGACCTGGTGCGCCACCAGGCCACGCACAC...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTCTCACCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTGGTCCACTTCTCTTTTaGCGGATGGATTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSPRLDSLVGVQSSASVIGPLLF*RMDFSG
Trigger: GCCAGAAAAATCCATCCGCCAAAAGAGAAGTGGACC...AATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTGACATTAATGCGGGCTaGGGGGACTGGGGGACACAG +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGDINAG*GDWGTQ
Trigger: CTGTGTCCCCCAGTCCCCCCAGCCCGCATTAATGTC...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GAAATCTGTGAACCTGGTATTTTCTCAGGGAATCCGGAAGATGATGATGATGATGTGAAGGCCACGGCGTaGAGCCGGCTCCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EICEPGIFSGNPEDDDDDVKATA*SRLLPE
Trigger: CTCCGGAAGGAGCCGGCTGCACGCCGTGGCCTTCAC...ATCATCATCATCATCTTCCGGATTCCCTGAGAAAATACCAGGTTCACAGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GATGATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCTGGCCGCTGTGGACTaGTGTTCCTCTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: DDDDDDGGSLLLQGYSRTLAAVD*CSSPEA
Trigger: AGCCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAG...CGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTCTCACCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTTGCTGTTCTAACTGCTaGAGTTGCAACTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: VSPRLDSLVGVQSSASVICCSNC*SCNSRC
Trigger: ACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCA...AATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGGTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTAACTGTTGCTGCTGGTaGATTAGCTGCAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRNCCCW*ISCSSG
Trigger: ACCAGAACTGCAGCTAATGCACCAGCAGCAACAGTT...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACTGCTCCTGCTGCTGCTaGAACCGCTGTTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLAIIFTRIEDFPRVSHHCSCCC*NRCCSC
Trigger: GCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCA...GTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CGACCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGAAGCTGTTCCTGCTGCTaGAATACCTGTTGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RPGERSDPVLMNTGVFIRSCSCC*NTCCSC
Trigger: ACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCT...TCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CGACCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGAAGCAATAGTAGCTGCTaGTGCTGCTGTAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: RPGERSDPVLMNTGVFIRSNSSC*CCCNCS
Trigger: GGAACAGTTACAGCAGCAGCAGCAGCTACTATTGCT...TCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACCAAACGTGTCCCGTGTaGTGTTTCAGCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLAIIFTRIEDFPRVSHHQTCPV*CFSPGP
Trigger: TGGACCGGGGCTGAAACAGCACACGGGACACGTTTG...GTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CTGAGGACGATTCGATGCCTTGGTCAGTTTCTACATAGTGCAAACAAGTTTGCTGCCCCACTTCCATCCTaGCGGTCAGACCCCGATTCC +
Preference number: 4 (lower is better)
Translates to: LRTIRCLGQFLHSANKFAAPLPS*RSDPDS
Trigger: GGAATCGGGGTCTGACCGCCAGGATGGAAGTGGGGC...AGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTGACTGCTGGCCGCTGTaGACTGCTGTTCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSDCWPL*TAVPLL
Trigger: CAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTC...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTCAAACCTCCACAGCCTaGTGCGGGAGAAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGQTSTA*CGRNLP
Trigger: GGGCAGATTTCTCCCGCACCAGGCTGTGGAGGTTTG...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp CCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGAATTCCATCCTCAAGACATTaGAGTTCCAGCACGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PGERSDPVLMNTGVFIRIPSSRH*SSSTKV
Trigger: GACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGG...AATTCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCATGGTGGAGCATTTCCTaGTCCCGGGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSWWSIS*SRAASA
Trigger: CGCAGAGGCTGCCCGGGAGCAGGAAATGCTCCACCA...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GATGATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGTGCTGCGGCTGCTGTTaGAGTTCTAGGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DDDDDDGGSLLLQGYSRTCCGCC*SSRCGC
Trigger: GCAGCCACACCTAGAACTGCAACAGCAGCCGCAGCA...CGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACGTCTTGATTCCCTGGTGGGTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTGAGGACGATTCGATaGCTTGGTCAGTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: PRLDSLVGVQSSASVINRLRTIR*LGQFLH
Trigger: ATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAG...ACGATTAATGACACTGGCCGAGGACTGGACACCCACCAGGGAATCAAGACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCTCCAATGGCACAGTGTCTaGTCAGGCAGCCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: MMMMMVEAFYSRDIPGRLQWHSV*SGSPPN
Trigger: GTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTG...GAGGCGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR TCA 90 bp GTGTCCAGTCCTCGGCCAGTGTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTTTTTCCTGTTGTAGTTaGGATAGCTGTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSSPRPVSLIVSPLGVFPFSCCS*DSCCCP
Trigger: TGGGCAACAACAGCTATCTCAACTACAACAGGAAAA...AGGAAAAACCCCCAGTGGCGAGACGATTAATGACACTGGCCGAGGACTGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTTCAAGGCAAATGCCTCTGAGGACGATTCGATGCCTTGGTCAGTTTCTACAAGTTCTAGGTGTGGCTaGGGCTGTTGCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: IFKANASEDDSMPWSVSTSSRCG*GCCSCS
Trigger: CGAGCAGCTGCAACAGCCGCAGCCACACCTAGAACT...TGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTTGCTGCAACAGTTGCTaGTGTAACTGTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PCDHFHQDRRFSTCVSPRCCNSC*CNCPCC
Trigger: GCAGCAGGGACAGTTACAGCAGCAACTGTTGCAGCA...ACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTAACTGTTCCTGCTGCTaGAGCAGTAGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PCDHFHQDRRFSTCVSPRNCSCC*SSSCCC
Trigger: ACAGCAGCAGCTACTGCTGCAGCAGCAGGAACAGTT...ACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTGGAGGCTGCAGTTGTTaGTGCTGCAATTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGGGCSC*CCNCSC
Trigger: GCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCC...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTTGATGCAGCTCACAACCCCTaGCCCAGACGACTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: DHFHQDRRFSTCVSPRLDAAHNP*PRRLGE
Trigger: TTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGC...ATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GAAATCTGTGAACCTGGTATTTTCTCAGGGAATCCGGAAGATGATGATGATGATGAAGGTCTCGGTGGCTaGCCCCACTTCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: EICEPGIFSGNPEDDDDDEGLGG*PHFHPG
Trigger: GCCAGGATGGAAGTGGGGCCAGCCACCGAGACCTTC...ATCATCATCATCATCTTCCGGATTCCCTGAGAAAATACCAGGTTCACAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTTGTAACTGTCCCTGCTaGTGCAGCAATAGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGCNCPC*CSNSSC
Trigger: GCAGCTACTATTGCTGCAGCAGCAGGGACAGTTACA...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTTGTGCCTGCTGCTGCTaGAACAGTTGCTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSCACCC*NSCCCN
Trigger: GTTACAGCAGCAACTGTTGCAGCAGCAGCAGGCACA...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GATGATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGTGTAACTGTGCCTGCTaGTGTTCCAGCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DDDDDDGGSLLLQGYSRTCNCAC*CSSSCC
Trigger: ACAGCAGCTGCTGGAACAGCAGCAGGCACAGTTACA...CGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCAAACTGCTCCTGCTGCTaGTGCAACCGCTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSNCSCC*CNRCCS
Trigger: AGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTT...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTTCAAGGCAAATGCCTCTGAGGACGATTCGATGCCTTGGTCAGTTTCTACAAGTAGCTGCTGCTGCTaGTGTAACTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IFKANASEDDSMPWSVSTSSCCC*CNCSCC
Trigger: GCAGCAGGAACAGTTACAGCAGCAGCAGCAGCTACT...TGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCTCTGCAGCAATAGTAGCTaGTGCTGCTGCTGTAACTGT +
Preference number: 4 (lower is better)
Translates to: MMMMMVEAFYSRDIPGRLCSNSS*CCCCNC
Trigger: ACAGTTACAGCAGCAGCAGCAGCTACTATTGCTGCA...GAGGCGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCTTGATAACTGTGCCTGCTGCTaGTGCAACAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DHFHQDRRFSTCVSPRLDNCACC*CNSCCC
Trigger: ACAGCAGCAACTGTTGCAGCAGCAGCAGGCACAGTT...ATCAAGACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGAACAGCTGTTGCTCTTaGACTTGCTGCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQNSCCS*TCCCSC
Trigger: ACAGCTACAGCAGCAAGTGCAAGAGCAACAGCTGTT...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp GTGCAAACAAGTTTGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTTCACCAGAATAGTAGCTGCTGCTaGTGCTGTAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VQTSLLPPRISPCDHFHQNSSCC*CCNCSC
Trigger: GCAGGAACAGTTACAGCAGCAGCAGCAGCTACTATT...CTGGTGAAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GAAATCTGTGAACCTGGTATTTTCTCAGGGAATCCGGAAGATGATGATGATGATCGGAGGGAAAACCTTTaGCAGACCCCTCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: EICEPGIFSGNPEDDDDDRRENL*QTPQRA
Trigger: TGCCCTTTGAGGGGTCTGCCAAAGGTTTTCCCTCCG...ATCATCATCATCATCTTCCGGATTCCCTGAGAAAATACCAGGTTCACAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACGTGGTAAAGAGCATTaGTCCCAAACGTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSRGKEH*SQTSSQ
Trigger: CTGAGACGACGTTTGGGAGCAATGCTCTTTACCACG...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CCA 90 bp GTCATTAATCGTCTCGCCACTGGGGGTTTTTCCTCGTTCGTAGTAAGTCCAGTTTTCTCTTTTGGCGGATaGATTTTTCTGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VINRLATGGFSSFVVSPVFSFGG*IFLAVK
Trigger: TTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAA...AACTGGACTTACTACGAACGAGGAAAAACCCCCAGTGGCGAGACGATTAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR GCA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCATGCAGTTGTTGCTGCTaGAATTGTTCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSCSCCC*NCSCCC
Trigger: ACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCA...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
3UTR CAA 72 bp GATGCCTTGGTCAGTTTCTACATAGTGCAAACAAGTTaGCTTCCTCCCCGAATTTCTCCTTGCGATCATTTT +
Preference number: 4 (lower is better)
Translates to: DALVSFYIVQTS*LPPRISPCDHF
Trigger: AAAATGATCGCAAGGAGAAATTCGGGGAGGAAGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp CTTGTCTGCGGGCGCAGTGGCTGTAGCGGCCTGCTCCGCGCGGGCTaGGCCACCGAGGGCCGCCGGCCGCGAGGCGCGCAGCAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LVCGRSGCSGLLRAG*ATEGRRPRGAQQAE
Trigger: CTCGGCCTGCTGCGCGCCTCGCGGCCGGCGGCCCTCGGTGGCCCAGCCCGCGCGGAGCAGGCCGCTACAGCCACTGCGCCCGCAGACAAG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp CTCCCGGCCAGGCAGCCCCGATCACGGCCCTCACAGCGCCTTGTCTaGGGGCGCAGTGGCTGTAGCGGCCTGCTCCGCGCGGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPARQPRSRPSQRLV*GRSGCSGLLRAGWA
Trigger: GGCCCAGCCCGCGCGGAGCAGGCCGCTACAGCCACTGCGCCCGCAGACAAGGCGCTGTGAGGGCCGTGATCGGGGCTGCCTGGCCGGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS TCA 90 bp CCGGGATGGCCACCACGGCCGGCGCTGCCACGGCGGGCAGCACCATaGGCTCCTGCACCACCACGTAGCCCGGGGGAGCCACCACGACCG +
Preference number: 5 (lower is better)
Translates to: PGWPPRPALPRRAAP*APAPPRSPGEPPRP
Trigger: CGGTCGTGGTGGCTCCCCCGGGCTACGTGGTGGTGCAGGAGCTCATGGTGCTGCCCGCCGTGGCAGCGCCGGCCGTGGTGGCCATCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp AGGCCGAGGCCCCTGGAGCGGCCCGCGCCGTGCAGCTGGCGCTCGTaGCGGCGGATCTGCACCTTGTGTCGGAAGCGCTCGCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: RPRPLERPAPCSWRS*RRICTLCRKRSPQS
Trigger: GGACTGTGGCGAGCGCTTCCGACACAAGGTGCAGATCCGCCGCCACGAGCGCCAGCTGCACGGCGCGGGCCGCTCCAGGGGCCTCGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp CATCCAGAAAGAGCCAGGAGGCGCAGGGCCACCCCGGGGGCTTTCTaGGCACTCCGGAGGGTCCACGCCCTCTGGGCTGCCGAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: HPERARRRRATPGAF*ALRRVHALWAAEVA
Trigger: GGCGACCTCGGCAGCCCAGAGGGCGTGGACCCTCCGGAGTGCCCAGAAAGCCCCCGGGGTGGCCCTGCGCCTCCTGGCTCTTTCTGGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp CGCTGCTCCTGCTGCCGTTCCAGCTCCTGCTGCCGCTCCAACTCCTaGCGCTGCTGCTCCAGCTCCTGCTCTGACCCCAGGTCCACCGGC +
Preference number: 5 (lower is better)
Translates to: RCSCCRSSSCCRSNS*RCCSSSCSDPRSTG
Trigger: GCCGGTGGACCTGGGGTCAGAGCAGGAGCTGGAGCAGCAGCGGCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACGGCAGCAGGAGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGGGCGCCTAGCTCCACCGGGGTCAGCTCCAGCTGCACCTCCTGCTaGTCCAGCTGCTGCTGCTGCTGCTCCAGCTGTTGCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WAPSSTGVSSSCTSC*SSCCCCCSSCCSSC
Trigger: GCAGCTGGAGCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGAGCTAGGCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCTGGGCGCCTAGCTCCACCGGGGTCAGCTCCAGCTGCACCTCCTaGTGCTCCAGCTGCTGCTGCTGCTGCTCCAGCTGTTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CWAPSSTGVSSSCTS*CSSCCCCCSSCCSS
Trigger: GCTGGAGCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGAGCTAGGCGCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CTACCCCGGAGCTCCTTCTGGGGGACCCTCCTTCCAGACCTTGGAGAGCTCTCCGGCCCTCACAGCGCCTaGTCTGCGGGCGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LPRSSFWGTLLPDLGELSGPHSA*SAGAVA
Trigger: AGCCACTGCGCCCGCAGACAAGGCGCTGTGAGGGCC...GGAGAGCTCTCCAAGGTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCAGCTCCTCCTGCAGTTTGAGCTGCAGCTGCCGCTGCTCCTGCTaGCGTTCCAGCTCCTGCTGCCGCTCCAACTCCTGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CSSSCSLSCSCRCSC*RSSSCCRSNSCRCC
Trigger: GCAGCAGCGGCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACGGCAGCAGGAGCAGCGGCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCCACCGGGGTCAGCTCCAGCTGCACCTCCTGCTGCTCCAGCTGCTaGTGCTGCTGCTCCAGCTGTTGCTCCAGCTGCTGCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STGVSSSCTSCCSSC*CCCSSCCSSCCSSS
Trigger: GGAGGAGCTGCAGCAGCTGGAGCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp AGCTCCACCGGGGTCAGCTCCAGCTGCACCTCCTGCTGCTCCAGCTaGTGCTGCTGCTGCTCCAGCTGTTGCTCCAGCTGCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSTGVSSSCTSCCSS*CCCCSSCCSSCCSS
Trigger: GGAGCTGCAGCAGCTGGAGCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp AGTTTGAGCTGCAGCTGCCGCTGCTCCTGCTGCCGTTCCAGCTCCTaGTGCCGCTCCAACTCCTGCCGCTGCTGCTCCAGCTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSCSCRCSCCRSSS*CRSNSCRCCSSSCS
Trigger: AGAGCAGGAGCTGGAGCAGCAGCGGCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACGGCAGCAGGAGCAGCGGCAGCTGCAGCTCAAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp TCGTTGTCCCGGCCGGGTTTCCTCAGCGATTTCACTGGCCCCCACTaGGGCCGAGACTGCTGGCCGCTGTGGACTGCTGTTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSRPGFLSDFTGPH*GRDCWPLWTAVPLL
Trigger: CAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAACCCGGCCGGGACAACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp CCGGGTTTCCTCAGCGATTTCACTGGCCCCCACTGGGGCCGAGACTaGTGGCCGCTGTGGACTGCTGTTCCTCTCCTGAGGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGFLSDFTGPHWGRD*WPLWTAVPLLRLFL
Trigger: GAGGAAGAGCCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCTGCTGCTGCTCCAGCTGTTGCTCCAGCTGCTGCAGCTCCTCCTaGAGTTTGAGCTGCAGCTGCCGCTGCTCCTGCTGCCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CCCCSSCCSSCCSSS*SLSCSCRCSCCRSS
Trigger: GCTGGAACGGCAGCAGGAGCAGCGGCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCAGCAGCTGGAGCAACAGCTGGAGCAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCTCCAGCTGCTGCTGCTGCTGCTCCAGCTGTTGCTCCAGCTGCTaGAGCTCCTCCTGCAGTTTGAGCTGCAGCTGCCGCTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CSSCCCCCSSCCSSC*SSSCSLSCSCRCSC
Trigger: GCAGGAGCAGCGGCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCAGCAGCTGGAGCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCGGCGGATCTGCACCTaGTGTCGGAAGCGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: QPQQWHSVCSGSPPNLHSRRICT*CRKRSP
Trigger: TGGCGAGCGCTTCCGACACAAGGTGCAGATCCGCCG...GCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp GGCTGTTGCAGCTGCTCGTGTTGCGGCTGTTGCTGCGGCTCGGGCTaGTGTTCTAACTGCTGCAGTTGCAACTCTCGTTGTCCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GCCSCSCCGCCCGSG*CSNCCSCNSRCPGR
Trigger: CCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp GGTTTCCTCAGCGATTTCACTGGCCCCCACTGGGGCCGAGACTGCTaGCCGCTGTGGACTGCTGTTCCTCTCCTGAGGCTCTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GFLSDFTGPHWGRDC*PLWTAVPLLRLFLL
Trigger: GAGGAGGAAGAGCCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS TCA 90 bp CCACCTGAGAGGGTGTCAGGCCCTGGGCCCCCATCCTCAAGACATTaGAGTTCCAGCACGAAGGTCTCGGTGGCTGGCCCCACTTCCATC +
Preference number: 5 (lower is better)
Translates to: PPERVSGPGPPSSRH*SSSTKVSVAGPTSI
Trigger: GATGGAAGTGGGGCCAGCCACCGAGACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGGGGCCCAGGGCCTGACACCCTCTCAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCTCGTGTTGCGGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTaGTGCAGTTGCAACTCTCGTTGTCCCGGCCGGGTTTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: CSCCGCCCGSGCCSN*CSCNSRCPGRVSSA
Trigger: CGCTGAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CTACCCCGGAGCTCCTTCTGGGGGACCCTCCTTCCAGACCTTGGAGAGCTCTCCCTTCCTGGCTTGGATTaGCACATCGACCCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LPRSSFWGTLLPDLGELSLPGLD*HIDPVS
Trigger: GCTCACCGGGTCGATGTGCAAATCCAAGCCAGGAAG...GGAGAGCTCTCCAAGGTCTGGAAGGAGGGTCCCCCAGAAGGAGCTCCGGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 90 bp CCCATCCTCAAGACATTGAAGTTCCAGCACGAAGGTCTCGGTGGCTaGCCCCACTTCCATCCTGGCGGTCAGACCCCGATTCCCGGGAGT +
Preference number: 5 (lower is better)
Translates to: PILKTLKFQHEGLGG*PHFHPGGQTPIPGS
Trigger: ACTCCCGGGAATCGGGGTCTGACCGCCAGGATGGAAGTGGGGCCAGCCACCGAGACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTCTGCTGCAACCGCTGTaGCTCTTGCACTTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPLLQPL*LLHLLW
Trigger: CCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAG...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCGGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTGCTGCAGTTaGAACTCTCGTTGTCCCGGCCGGGTTTCCTCAGCGATTTCACTG +
Preference number: 5 (lower is better)
Translates to: CGCCCGSGCCSNCCS*NSRCPGRVSSAISL
Trigger: CAGTGAAATCGCTGAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCGTGTTGCGGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTGCTaGAGTTGCAACTCTCGTTGTCCCGGCCGGGTTTCCTCAGCGATT +
Preference number: 5 (lower is better)
Translates to: SCCGCCCGSGCCSNC*SCNSRCPGRVSSAI
Trigger: AATCGCTGAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCTAGGTGTGGCTGCGGCTGTTGCAGCTGCTCGTGTTGCGGCTGTTaGTGCGGCTCGGGCTGCTGTTCTAACTGCTGCAGTTGCAACTCT +
Preference number: 5 (lower is better)
Translates to: SRCGCGCCSCSCCGC*CGSGCCSNCCSCNS
Trigger: AGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGTTGCAGTTCTAGGTGTGGCTGCGGCTGTTGCAGCTGCTCGTGTTaGGGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: CCSSRCGCGCCSCSC*GCCCGSGCCSNCCS
Trigger: ACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGAACTGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCCTCCTCCTCGGGCTCCAGGGGAGGAGGCTGCAGTTGTTGCTGCTaGAATTGTTCCTGCTGCTGTTGCAACAGCTGCTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSSSGSRGGGCSCCC*NCSCCCCNSCCCCC
Trigger: GCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGAGCCCGAGGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GCTGCAGCTCACAACCCCTGCCCCAGACGACTTGGTGAACGTGGTAAAGAGCATCAGTTGCAACTCTCGTaGTCCCGGCCGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: AAAHNPCPRRLGERGKEHQLQLS*SRPGFL
Trigger: GAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTG...ATGCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGGGGTTGTGAGCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp GGCTCCAGGGGAGGAGGCTGCAGTTGTTGCTGCTGCAATTGTTCCTaGTGCTGTTGCAACAGCTGCTGTTGCTGCTGCTGCTGTAACTGT +
Preference number: 5 (lower is better)
Translates to: GSRGGGCSCCCCNCS*CCCNSCCCCCCCNC
Trigger: ACAGTTACAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCCCTCCAAACCTCCACAGCCTGGACGATTCGATGCCTaGGTCAGTTTCTACATAGTG +
Preference number: 5 (lower is better)
Translates to: APAMAQCLLRQPSKPPQPGRFDA*VSFYIV
Trigger: CACTATGTAGAAACTGACCAAGGCATCGAATCGTCC...AGGCTGTGGAGGTTTGGAGGGCTGCCTGAGCAGACACTGTGCCATTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp TCTCAGATATTCTTTCCCCAGCCCCAGCAATGGCACAGTGTCTGCTCAGGCAGCGCAGGACTTCCTGGCTaGGATTTGCACATCGACCCG +
Preference number: 5 (lower is better)
Translates to: SQIFFPQPQQWHSVCSGSAGLPG*DLHIDP
Trigger: CGGGTCGATGTGCAAATCCAAGCCAGGAAGTCCTGC...GCTGCCTGAGCAGACACTGTGCCATTGCTGGGGCTGGGGAAAGAATATCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCCAGGGGAGGAGGCTGCAGTTGTTGCTGCTGCAATTGTTCCTGCTaGTGTTGCAACAGCTGCTGTTGCTGCTGCTGCTGTAACTGTTCC +
Preference number: 5 (lower is better)
Translates to: SRGGGCSCCCCNCSC*CCNSCCCCCCCNCS
Trigger: GGAACAGTTACAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CCCGGTGAGCGCTCTGACCCTGTGTTGATGAACACAGGCGTTTTCATCAGAATTCCGGAGGGAAAACCTTaGGCAGACCCCTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: PGERSDPVLMNTGVFIRIPEGKP*ADPSKG
Trigger: GCCCTTTGAGGGGTCTGCCAAAGGTTTTCCCTCCGG...AATTCTGATGAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCGCTCACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp ACCTGTTGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGCTGCTaGTGCAACCGCTGTTGCTCTTGCACTTGCTGTGGCTGTAACTGT +
Preference number: 5 (lower is better)
Translates to: TCCSCACCVCNCSCC*CNRCCSCTCCGCNC
Trigger: ACAGTTACAGCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCAATACCTGTTGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTaGTGCTGCTGCAACCGCTGTTGCTCTTGCACTTGCTGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: CNTCCSCACCVCNCS*CCCNRCCSCTCCGC
Trigger: ACAGCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TCTTGCACTTGCTGCTGTAGCTGTTCCTGCTGCTGCAATACCTGTTaGTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SCTCCCSCSCCCNTC*SCACCVCNCSCCCC
Trigger: GCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTTTGCAGCTGCTCGTGTaGCGGCTGTTGCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PCDHFHQDRRFSTCVSPRLQLLV*RLLLRL
Trigger: GAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAA...ACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGTAACTGCTCCTGCTGCTGCTGCAACCGCTGTTGCTCTTGCACTTaGTGTGGCTGTAACTGTTGCTGCTGGTGCATTAGCTGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CNCSCCCCNRCCSCT*CGCNCCCWCISCSS
Trigger: AGAACTGCAGCTAATGCACCAGCAGCAACAGTTACAGCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp AATACCTGTTGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGCTaGTGCTGCAACCGCTGTTGCTCTTGCACTTGCTGTGGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: NTCCSCACCVCNCSC*CCNRCCSCTCCGCN
Trigger: GTTACAGCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGTATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCAATTGTTCCTGCTGCTGTTGCAACAGCTGCTGTTGCTGCTGCTaGTGTAACTGTTCCTGCTGCTGCAGCAGTAGCTGCTGCTGTAAC +
Preference number: 5 (lower is better)
Translates to: CNCSCCCCNSCCCCC*CNCSCCCSSSCCCN
Trigger: GTTACAGCAGCAGCTACTGCTGCAGCAGCAGGAACAGTTACAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp AACAGCTGTTGCTCTTGCACTTGCTGCTGTAGCTGTTCCTGCTGCTaGAATACCTGTTGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: NSCCSCTCCCSCSCC*NTCCSCACCVCNCS
Trigger: GGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCAACAGCTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GAAATCTGTGAACCTGGTATTTTCTCAGGGAATCCGGAAGATGATGATGATGATGCGGCCGAGCAGAAGTaGGTGGAGACTCTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: EICEPGIFSGNPEDDDDDAAEQK*VETLRR
Trigger: CCGCCGGAGAGTCTCCACCAACTTCTGCTCGGCCGC...ATCATCATCATCATCTTCCGGATTCCCTGAGAAAATACCAGGTTCACAGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GATGATGATGATGATGATGGTGGAAGCCTTTTACTCCAGGGATATTCCAGGACGCCCTCCTTCCAGACCTaGGAGAGCTCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: DDDDDDGGSLLLQGYSRTPSFQT*ESSPRR
Trigger: CCTTCTGGGAGAGCTCTCCAAGGTCTGGAAGGAGGG...CGTCCTGGAATATCCCTGGAGTAAAAGGCTTCCACCATCATCATCATCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACCACGTCCTGCCCCAGACGACTaGGTGAACGTGGTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PCDHFHQDRRFSTCVSPRPAPDD*VNVVKS
Trigger: GCTCTTTACCACGTTCACCAAGTCGTCTGGGGCAGG...ACGTGGTGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGCTGTAACAGCTGTTGCTCTTGCACTTGCTGCTGTAGCTGTTCCTaGTGCTGCAATACCTGTTGCTCTTGTGCTTGCTGCGTCTGTAAC +
Preference number: 5 (lower is better)
Translates to: CCNSCCSCTCCCSCS*CCNTCCSCACCVCN
Trigger: GTTACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCAACAGCTGTTACAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTGTGTCTCACCACGTCTaGATTCCCTGGTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSVSHHV*IPWWVS
Trigger: GGACACCCACCAGGGAATCAAGACGTGGTGAGACAC...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CCACTTCTCTTTTGGCGGATGGATTTTTCTGGCGGTGAAATCTGTGAACCTGGTAGGAGGCTGCAGTTGTaGCTGCTGCAATTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PLLFWRMDFSGGEICEPGRRLQL*LLQLFL
Trigger: CAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCT...ACCAGGTTCACAGATTTCACCGCCAGAAAAATCCATCCGCCAAAAGAGAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 90 bp TGTAACTGTTCCTGCTGTTGCTGTAACAGCTGTTGCTCTTGCACTTaGTGCTGTAGCTGTTCCTGCTGCTGCAATACCTGTTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: CNCSCCCCNSCCSCT*CCSCSCCCNTCCSC
Trigger: ACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCAACAGCTGTTACAGCAACAGCAGGAACAGTTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp GACTTGGTGAACGTGGTAAAGAGCATTGCTCCCAAACGTCGTCTCAGATATTCTCGGTCCACTTCTCTTTaGGCGGATGGATTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: DLVNVVKSIAPKRRLRYSRSTSL*ADGFFW
Trigger: CCAGAAAAATCCATCCGCCAAAAGAGAAGTGGACCG...AGAATATCTGAGACGACGTTTGGGAGCAATGCTCTTTACCACGTTCACCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp ATTTTCAAGGCAAATGCCTCTGAGGACGATTCGATGCCTTGGTCAGTTTCTACACCCATCCTCAAGACATaGAAGTTCCAGCACGAAGGT +
Preference number: 5 (lower is better)
Translates to: IFKANASEDDSMPWSVSTPILKT*KFQHEG
Trigger: ACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGG...TGTAGAAACTGACCAAGGCATCGAATCGTCCTCAGAGGCATTTGCCTTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp ATTTCTCCTTGCGATCATTTTCACCAGGATCGAAGATTTTCCACGTGTGTCTCACGCTCTGACCCTGTGTaGATGAACACAGGCGTTTTC +
Preference number: 5 (lower is better)
Translates to: ISPCDHFHQDRRFSTCVSRSDPV*MNTGVF
Trigger: GAAAACGCCTGTGTTCATCAACACAGGGTCAGAGCG...TGAGACACACGTGGAAAATCTTCGATCCTGGTGAAAATGATCGCAAGGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS-3UTR CAA 90 bp CTGAGGACGATTCGATGCCTTGGTCAGTTTCTACATAGTGCAAACAAGTTTGCTATAGTGCAAACAAGTTaGCTTCCTCCCCGAATTTCT +
Preference number: 5 (lower is better)
Translates to: LRTIRCLGQFLHSANKFAIVQTS*LPPRIS
Trigger: AGAAATTCGGGGAGGAAGCAAACTTGTTTGCACTAT...AGCAAACTTGTTTGCACTATGTAGAAACTGACCAAGGCATCGAATCGTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp AGCGCCTTGTCTGCGGGCGCAGTGGCTGTAGCGGCCTaGTCCGCGCGGGCTGGGCCACCGAGGGCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: SALSAGAVAVAA*SARAGPPRAAG
Trigger: GCCGGCGGCCCTCGGTGGCCCAGCCCGCGCGGAGCAGGCCGCTACAGCCACTGCGCCCGCAGACAAGGCGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CAA 90 bp GTCCCCTCCCGGCCAGGCAGCCCCGATCACGGCCCTCACAGCGCCTaGTCTGCGGGCGCAGTGGCTGTAGCGGCCTGCTCCGCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: VPSRPGSPDHGPHSA*SAGAVAVAACSARA
Trigger: AGCCCGCGCGGAGCAGGCCGCTACAGCCACTGCGCCCGCAGACAAGGCGCTGTGAGGGCCGTGATCGGGGCTGCCTGGCCGGGAGGGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 72 bp AGGCCGAGGCCCCTGGAGCGGCCCGCGCCGTGCAGCTaGCGCTCGTGGCGGCGGATCTGCACCTTGTGTCGG +
Preference number: 6 (lower is better)
Translates to: RPRPLERPAPCS*RSWRRICTLCR
Trigger: CCGACACAAGGTGCAGATCCGCCGCCACGAGCGCCAGCTGCACGGCGCGGGCCGCTCCAGGGGCCTCGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS TCA 72 bp CCACCACGGCCGGCGCTGCCACGGCGGGCAGCACCATaGGCTCCTGCACCACCACGTAGCCCGGGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: PPRPALPRRAAP*APAPPRSPGEP
Trigger: TGGCTCCCCCGGGCTACGTGGTGGTGCAGGAGCTCATGGTGCTGCCCGCCGTGGCAGCGCCGGCCGTGGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp GCTCCGCCGCCCCCTGCGGCTGGCACCAGTTCCAGCTaGAGCTCCGGCTGCACGGGGGTCAGCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: APPPPAAGTSSS*SSGCTGVSSSC
Trigger: GCAGCTGGAGCTGACCCCCGTGCAGCCGGAGCTGCAGCTGGAACTGGTGCCAGCCGCAGGGGGCGGCGGAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 72 bp AGAGCCAGGAGGCGCAGGGCCACCCCGGGGGCTTTCTaGGCACTCCGGAGGGTCCACGCCCTCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: RARRRRATPGAF*ALRRVHALWAA
Trigger: GGCAGCCCAGAGGGCGTGGACCCTCCGGAGTGCCCAGAAAGCCCCCGGGGTGGCCCTGCGCCTCCTGGCTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp AGGCAGCCCCGATCACGGCCCTCACAGCGCCTTGTCTaGGGGCGCAGTGGCTGTAGCGGCCTGCTCCGCGCG +
Preference number: 6 (lower is better)
Translates to: RQPRSRPSQRLV*GRSGCSGLLRA
Trigger: CGCGCGGAGCAGGCCGCTACAGCCACTGCGCCCGCAGACAAGGCGCTGTGAGGGCCGTGATCGGGGCTGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 72 bp GGGGCTTTCTGGGCACTCCGGAGGGTCCACGCCCTCTaGGCTGCCGAGGTCGCCCTGGGCCAAGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: GAFWALRRVHAL*AAEVALGQGKG
Trigger: CCCCTTCCCTTGGCCCAGGGCGACCTCGGCAGCCCAGAGGGCGTGGACCCTCCGGAGTGCCCAGAAAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp CCCGCGCCGTGCAGCTGGCGCTCGTGGCGGCGGATCTaGACCTTGTGTCGGAAGCGCTCGCCACAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PAPCSWRSWRRI*TLCRKRSPQSS
Trigger: CGAGGACTGTGGCGAGCGCTTCCGACACAAGGTGCAGATCCGCCGCCACGAGCGCCAGCTGCACGGCGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TTTCTGGGCACTCCGGAGGGTCCACGCCCTCTGGGCTaGCGAGGTCGCCCTGGGCCAAGGGAAGGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: FLGTPEGPRPLG*RGRPGPREGAE
Trigger: CTCAGCCCCTTCCCTTGGCCCAGGGCGACCTCGGCAGCCCAGAGGGCGTGGACCCTCCGGAGTGCCCAGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp GTGGTCAGCAGAGGCTGCGAGGTGAAGGCCACGGCGTaGAGCCGGCTCCTTCCGGAGGCGCCTCCATCCAGA +
Preference number: 6 (lower is better)
Translates to: VVSRGCEVKATA*SRLLPEAPPSR
Trigger: TCTGGATGGAGGCGCCTCCGGAAGGAGCCGGCTGCACGCCGTGGCCTTCACCTCGCAGCCTCTGCTGACCAC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp CGGCTGGTGGAGCATTTCCTGCTCCCGGGCAGCCTCTaGGCTAGGGAGGTGTGGTCAGCAGAGGCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: RLVEHFLLPGSL*AREVWSAEAAR
Trigger: CCTCGCAGCCTCTGCTGACCACACCTCCCTAGCGCAGAGGCTGCCCGGGAGCAGGAAATGCTCCACCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp CCCCGATTCCCGGGAGTCGGCTGGTGGAGCATTTCCTaGTCCCGGGCAGCCTCTGCGCTAGGGAGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: PRFPGVGWWSIS*SRAASALGRCG
Trigger: ACCACACCTCCCTAGCGCAGAGGCTGCCCGGGAGCAGGAAATGCTCCACCAGCCGACTCCCGGGAATCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp AGCTCCACCGGGGTCAGCTCCAGCTGCACCTCCTGCTaGTCCAGCTGCTGCTGCTGCTGCTCCAGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SSTGVSSSCTSC*SSCCCCCSSCC
Trigger: GCAACAGCTGGAGCAGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp CTCAGCGATTTCACTGGCCCCCACTGGGGCCGAGACTaGTGGCCGCTGTGGACTGCTGTTCCTCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: LSDFTGPHWGRD*WPLWTAVPLLR
Trigger: CCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 72 bp AGCGATTTCACTGGCCCCCACTGGGGCCGAGACTGCTaGCCGCTGTGGACTGCTGTTCCTCTCCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SDFTGPHWGRDC*PLWTAVPLLRL
Trigger: GAGCCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS TCA 72 bp AGGGTGTCAGGCCCTGGGCCCCCATCCTCAAGACATTaGAGTTCCAGCACGAAGGTCTCGGTGGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: RVSGPGPPSSRH*SSSTKVSVAGP
Trigger: GGGGCCAGCCACCGAGACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGGGGCCCAGGGCCTGACACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp GGCTGCGGCTGTTGCAGCTGCTCGTGTTGCGGCTGTTaGTGCGGCTCGGGCTGCTGTTCTAACTGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: GCGCCSCSCCGC*CGSGCCSNCCS
Trigger: ACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGTTGCAGTTCTAGGTGTGGCTGCGGCTGTTGCAGCTaGTCGTGTTGCGGCTGTTGCTGCGGCTCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: CCSSRCGCGCCS*SCCGCCCGSGC
Trigger: GCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGAACTGCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp GGCTGCTGTTGCAGTTCTAGGTGTGGCTGCGGCTGTTaGAGCTGCTCGTGTTGCGGCTGTTGCTGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: GCCCSSRCGCGC*SCSCCGCCCGS
Trigger: CGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGAACTGCAACAGCAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CAA 72 bp GAGGGTGTCAGGCCCTGGGCCCCCATCCTCAAGACATaGAAGTTCCAGCACGAAGGTCTCGGTGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: EGVRPWAPILKT*KFQHEGLGGWP
Trigger: GGGCCAGCCACCGAGACCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGGGGCCCAGGGCCTGACACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCTGCGGCTCGGGCTGCTGTTCTAACTGCTGCAGTTaGAACTCTCGTTGTCCCGGCCGGGTTTCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: CCGSGCCSNCCS*NSRCPGRVSSA
Trigger: CGCTGAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp GGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTGCTaGAGTTGCAACTCTCGTTGTCCCGGCCGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: GCCCGSGCCSNC*SCNSRCPGRVS
Trigger: GGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCGGCTGTTGCTGCGGCTCGGGCTGCTGTTCTAACTaGTGCAGTTGCAACTCTCGTTGTCCCGGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: CGCCCGSGCCSN*CSCNSRCPGRV
Trigger: AACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TCTTGCTGCGGCTGCTGTTGCAGTTCTAGGTGTGGCTaGGGCTGTTGCAGCTGCTCGTGTTGCGGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SCCGCCCSSRCG*GCCSCSCCGCC
Trigger: GCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGAACTGCAACAGCAGCCGCAGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CAA 90 bp CTCCTCGGGCTCCAGGGGAGGAGGCTGCAGTTGTTGCTGCTGCAATaGTTCCTGCTGCTGTTGCAACAGCTGCTGTTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LLGLQGRRLQLLLLQ*FLLLLQQLLLLLLL
Trigger: CAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGAGCCCGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TCCTCCTCGGGCTCCAGGGGAGGAGGCTGCAGTTGTTaGTGCTGCAATTGTTCCTGCTGCTGTTGCAACAGC +
Preference number: 6 (lower is better)
Translates to: SSSGSRGGGCSC*CCNCSCCCCNS
Trigger: GCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGAGCCCGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp AGCTGCTCGTGTTGCGGCTGTTGCTGCGGCTCGGGCTaGTGTTCTAACTGCTGCAGTTGCAACTCTCGTTGT +
Preference number: 6 (lower is better)
Translates to: SCSCCGCCCGSG*CSNCCSCNSRC
Trigger: ACAACGAGAGTTGCAACTGCAGCAGTTAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CCA 72 bp AAGACATTGAAGTTCCAGCACGAAGGTCTCGGTGGCTaGCCCCACTTCCATCCTGGCGGTCAGACCCCGATT +
Preference number: 6 (lower is better)
Translates to: KTLKFQHEGLGG*PHFHPGGQTPI
Trigger: AATCGGGGTCTGACCGCCAGGATGGAAGTGGGGCCAGCCACCGAGACCTTCGTGCTGGAACTTCAATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGCTGCTaGTGCAACCGCTGTTGCTCTTGCACTTGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SCACCVCNCSCC*CNRCCSCTCCG
Trigger: GCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS CAA 72 bp CTCCAGGGGAGGAGGCTGCAGTTGTTGCTGCTGCAATaGTTCCTGCTGCTGTTGCAACAGCTGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LQGRRLQLLLLQ*FLLLLQQLLLL
Trigger: CAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGCAGCAACAACTGCAGCCTCCTCCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TCCTGCTGCTGCTGCAACCGCTGTTGCTCTTGCACTTaGTGTGGCTGTAACTGTTGCTGCTGGTGCATTAGC +
Preference number: 6 (lower is better)
Translates to: SCCCCNRCCSCT*CGCNCCCWCIS
Trigger: GCTAATGCACCAGCAGCAACAGTTACAGCCACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGCTaGTGCTGCAACCGCTGTTGCTCTTGCACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: CSCACCVCNCSC*CCNRCCSCTCC
Trigger: ACAGCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGTTGCTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTaGTGCTGCTGCAACCGCTGTTGCTCTTGCACTTGC +
Preference number: 6 (lower is better)
Translates to: CCSCACCVCNCS*CCCNRCCSCTC
Trigger: GCAAGTGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCTGTTCCAGCAGCTGCTGTTGTAACTGTGCCTGCTaGTGCTGCAACAGTTGCTGCTGTAACTGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: CCSSSCCCNCAC*CCNSCCCNCPC
Trigger: GCAGGGACAGTTACAGCAGCAACTGTTGCAGCAGCAGCAGGCACAGTTACAACAGCAGCTGCTGGAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCTGCTGTAGCTGTTCCTGCTGCTGCAATACCTGTTaGTCTTGTGCTTGCTGCGTCTGTAACTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CCCSCSCCCNTC*SCACCVCNCSC
Trigger: GCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCAATTGTTCCTGCTGCTGTTGCAACAGCTGCTGTTaGTGCTGCTGCTGTAACTGTTCCTGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CNCSCCCCNSCC*CCCCNCSCCCS
Trigger: GCTGCAGCAGCAGGAACAGTTACAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGCTCTTGCACTTGCTGCTGTAGCTGTTCCTGCTGCTaGAATACCTGTTGCTCTTGTGCTTGCTGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: CSCTCCCSCSCC*NTCCSCACCVC
Trigger: ACAGACGCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp AGCTGTTGCTCTTGCACTTGCTGCTGTAGCTGTTCCTaGTGCTGCAATACCTGTTGCTCTTGTGCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: SCCSCTCCCSCS*CCNTCCSCACC
Trigger: GCAGCAAGCACAAGAGCAACAGGTATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCAACAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp CGCTGTTGCTCTTGCACTTGCTGTGGCTGTAACTGTTaGTGCTGGTGCATTAGCTGCAGTTCTGGTTTCAGT +
Preference number: 6 (lower is better)
Translates to: RCCSCTCCGCNC*CWCISCSSGFS
Trigger: ACTGAAACCAGAACTGCAGCTAATGCACCAGCAGCAACAGTTACAGCCACAGCAAGTGCAAGAGCAACAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS GCA 72 bp TGTTGCTCTTGCACTTGCTGTGGCTGTAACTGTTGCTaGTGGTGCATTAGCTGCAGTTCTGGTTTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: CCSCTCCGCNCC*WCISCSSGFSS
Trigger: GGAACTGAAACCAGAACTGCAGCTAATGCACCAGCAGCAACAGTTACAGCCACAGCAAGTGCAAGAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457543.4
CDS TCA 72 bp TGCTGGTGCATTAGCTGCAGTTCTGGTTTCAGTTCCTaGTGGTGCACGGATTGGTGTTTTTCCTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: CWCISCSSGFSS*WCTDWCFSCCS
Trigger: ACTACAACAGGAAAAACACCAATCCGTGCACCATCAGGAACTGAAACCAGAACTGCAGCTAATGCACCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457543.4