Pregenerated sensors for ZNF846 (Homo sapiens)
Ensembl gene IDs: ENSG00000196605Ensembl transcript IDs: ENST00000397902.6, ENST00000586293.5, ENST00000586814.5, ENST00000587650.1, ENST00000588267.5, ENST00000589038.1, ENST00000589412.5, ENST00000589453.5, ENST00000590471.1, ENST00000591377.1, ENST00000592587.1, ENST00000592859.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCAAAGGCTTTTCCACTCTaGTTATCCTCAGAAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: HQPGQHDETSSQAGRGGSKAFPL*LSSEVF Trigger: GAAAACTTCTGAGGATAATCAGAGTGGAAAAGCCTT...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGTTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCTTCTCCAACAGTCTTTaGATTCACACAATTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QEFDTSLDNMMKLRLRPGFSNSL*IHTISL Trigger: AAGAGAAATTGTGTGAATGCAAAGACTGTTGGAGAA...GCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAACTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGTTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGTGAGTCATAAGAAATaGGTGTTCATTGAAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: QEFDTSLDNMMKLRLRPGVSHKK*VFIEDF Trigger: AAAGTCTTCAATGAACACCCATTTCTTATGACTCAC...GCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAACTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGGTGAGTCATAAGAAATaGGTGTTCATTGAAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: KNYEESSFLRLFHSDYPQVSHKK*VFIEDF Trigger: AAAGTCTTCAATGAACACCCATTTCTTATGACTCAC...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGTTCTCCAACAGTCTTaGCATTCACACAATTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FDTSLDNMMKLRLRPGAVVLQQS*HSHNFS Trigger: AGAGAAATTGTGTGAATGCAAAGACTGTTGGAGAAC...CACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGTTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCAGAAATGGGTGTTCATaGAAGACTTTTCCAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: QEFDTSLDNMMKLRLRPGRNGCS*KTFPEW Trigger: CCATTCTGGAAAAGTCTTCAATGAACACCCATTTCT...GCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAACTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| 3UTR-3UTR CAA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGAGAAATGGGTGTTCATaGAAGACTTTTCCAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: KNYEESSFLRLFHSDYPQRNGCS*KTFPEW Trigger: CCATTCTGGAAAAGTCTTCAATGAACACCCATTTCT...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR CCA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCACTCCACCGGGGACCCTaGGCCAGGCCCAGACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HQPGQHDETSSQAGRGGSLHRGP*ARPRLM Trigger: CATCAGTCTGGGCCTGGCCCAGGGTCCCCGGTGGAG...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | CAGGAGTTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGGGCCAGGCCCAGACTaGTGCGGGCGCAGCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEFDTSLDNMMKLRLRPGGPGPD*CGRSGK Trigger: CTTCCCGCTGCGCCCGCATCAGTCTGGGCCTGGCCC...GCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAACTCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | TTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGCAATCGCCCTGTCGGTaGCAAGAGGACGCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FDTSLDNMMKLRLRPGAVQSPCR*QEDAGA Trigger: GGCCCCAGCGTCCTCTTGTCACCGACAGGGCGATTG...CACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR GCA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCAATGACCGGAACGCACTaGAATCGCCCTGTCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HQPGQHDETSSQAGRGGSMTGTH*NRPVGD Trigger: GTCACCGACAGGGCGATTGCAGTGCGTTCCGGTCAT...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR CCA 90 bp | CAGGAGTTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGTGACAAGAGGACGCTaGGGCCCTTTTCCACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QEFDTSLDNMMKLRLRPGVTRGR*GPFPQQ Trigger: CTGTTGTGGAAAAGGGCCCCAGCGTCCTCTTGTCAC...GCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | TTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGAGATCTCTCTGGGCTTaGTCCAACAAAGTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDTSLDNMMKLRLRPGAVRSLWA*SNKVHS Trigger: GGAGTGGACTTTGTTGGATCAAGCCCAGAGAGATCT...CACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR CCA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCAAGATGCTTTTCCTTCTaGAGAAAGGACACAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQPGQHDETSSQAGRGGSRCFSF*RKDTKV Trigger: AACCTTTGTGTCCTTTCTCCAGAAGGAAAAGCATCT...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | TTTGACACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGAAAGGACACAAAGGTTaGCTGGCTGCTTTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FDTSLDNMMKLRLRPGAVKGHKG*LAAFKQ Trigger: CTGTTTAAAAGCAGCCAGTCAACCTTTGTGTCCTTT...CACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR CCA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCAGTGAGTCATAAGAAATaGGTGTTCATTGAAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HQPGQHDETSSQAGRGGSVSHKK*VFIEDF Trigger: AAAGTCTTCAATGAACACCCATTTCTTATGACTCAC...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGAGATCTCTCTGGGCTTaGTCCAACAAAGTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQRSLWA*SNKVHS Trigger: GGAGTGGACTTTGTTGGATCAAGCCCAGAGAGATCT...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGCTGAAGTCAGGAGTTTaGCACCAGCCTGGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQLKSGV*HQPGQH Trigger: ATGTTGTCCAGGCTGGTGTCAAACTCCTGACTTCAG...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGTCGATGTTCCTGTCATaGAGACAGAAAGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQSMFLS*RQKVSW Trigger: CCAGGACACTTTCTGTCTTCATGACAGGAACATCGA...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR GCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGTATTGCTTCTCTCCCTaGAGAACTCCTGTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQYCFSP*RTPVTP Trigger: AGGAGTGACAGGAGTTCTGCAGGGAGAGAAGCAATA...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGCTTTTCCACAACAGCTaGGATGCTTTTCCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQLFHNS*DAFPSG Trigger: TCCAGAAGGAAAAGCATCTCAGCTGTTGTGGAAAAG...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR GCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGGTTTCTCTGCAGTATTaGTTCTCTCCCTGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQVSLQY*FSPCRT Trigger: AGTTCTGCAGGGAGAGAAGCAATACTGCAGAGAAAC...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGGCCTTTTCTCCAGTGTaGGTTCTTAAATGGGTACTA | + |
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Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQAFSPV*VLKWVL Trigger: TAGTACCCATTTAAGAACTCACACTGGAGAAAAGGC...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000586293.5 |
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| CDS-3UTR TCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGAAGGCTTTTCCACTCTaGTTATCCTCAGAAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQKAFPL*LSSEVF Trigger: GAAAACTTCTGAGGATAATCAGAGTGGAAAAGCCTT...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR GCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGGTGTGCGTTCGCATGTaGATATTAAGATTTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQVCVRM*ILRFVE Trigger: TTCCACAAATCTTAATATGCACATGCGAACGCACAC...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586293.5 |
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| CDS-3UTR GCA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGTTCTCCAACAGTCTTTaGATTCACACAATTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KNYEESSFLRLFHSDYPQFSNSL*IHTISL Trigger: AAGAGAAATTGTGTGAATGCAAAGACTGTTGGAGAA...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS GCA 90 bp | CATTGTGGGGTGGCTCTTCCATCTCATGGCCTCCCTGACTCGTGCTaGGGAGAACCGGCAATCATCCTCCTGCATCTTACTCTCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: HCGVALPSHGLPDSC*GEPAIILLHLTLFR Trigger: CCGGAAGAGAGTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCACCCCACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS TCA 90 bp | AGGTTCTTCCCATTGTGGGGTGGCTCTTCCATCTCATGGCCTCCCTaGCTCGTGCTGCGGAGAACCGGCAATCATCCTCCTGCATCTTAC | + |
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Preference number: 5 (lower is better) Translates to: RFFPLWGGSSISWPP*LVLRRTGNHPPASY Trigger: GTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCACCCCACAATGGGAAGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS GCA 90 bp | TCCCATTGTGGGGTGGCTCTTCCATCTCATGGCCTCCCTGACTCGTaGTGCGGAGAACCGGCAATCATCCTCCTGCATCTTACTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SHCGVALPSHGLPDS*CGEPAIILLHLTLF Trigger: GAAGAGAGTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCACCCCACAATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS CCA 90 bp | TCTCCGGAACGCACTGCAATCGCCCTGTCGGTGACAAGAGGACGCTaGGGCCCTTTTCCACAACAGCTGAGATGCTTTTCCTTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SPERTAIALSVTRGR*GPFPQQLRCFSFWR Trigger: TCTCCAGAAGGAAAAGCATCTCAGCTGTTGTGGAAAAGGGCCCCAGCGTCCTCTTGTCACCGACAGGGCGATTGCAGTGCGTTCCGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592859.1 |
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| CDS CCA 90 bp | CATAGACAAGGAGAACCTTGTCTCCAGGTTCTTCCCATTGTGGGGTaGCTCTTCCATCTCATGGCCTCCCTGACTCGTGCTGCGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: HRQGEPCLQVLPIVG*LFHLMASLTRAAEN Trigger: GTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCACCCCACAATGGGAAGAACCTGGAGACAAGGTTCTCCTTGTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS-3UTR CAA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCACCTCAGCTCTTCCATTaGTTCCAATCCAGACATGAG | + |
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Preference number: 5 (lower is better) Translates to: HQPGQHDETSSQAGRGGSPQLFH*FQSRHE Trigger: CTCATGTCTGGATTGGAACAAATGGAAGAGCTGAGG...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS GCA 90 bp | ATGGCCTCCCTGACTCGTGCTGCGGAGAACCGGCAATCATCCTCCTaGATCTTACTCTCTTCCGGCCAGCAGATTGTTTTCCCCAACTTT | + |
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Preference number: 5 (lower is better) Translates to: MASLTRAAENRQSSS*ILLSSGQQIVFPNF Trigger: AAAGTTGGGGAAAACAATCTGCTGGCCGGAAGAGAGTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS-3UTR CAA 90 bp | CACCAGCCTGGACAACATGATGAAACTTCGTCTCAGGCCGGGCGCGGTGGCTCAAGAAATGGGTGTTCATaGAAGACTTTTCCAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: HQPGQHDETSSQAGRGGSRNGCS*KTFPEW Trigger: CCATTCTGGAAAAGTCTTCAATGAACACCCATTTCT...TGAGCCACCGCGCCCGGCCTGAGACGAAGTTTCATCATGTTGTCCAGGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589453.5 |
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| CDS-3UTR CAA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGACCCAGCCACTAGCCTaGGCTTCTCGATGTTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: KNYEESSFLRLFHSDYPQTQPLA*ASRCSC Trigger: ACAGGAACATCGAGAAGCCAAGGCTAGTGGCTGGGT...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS-3UTR CAA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGCCTCAGCTCTTCCATTaGTTCCAATCCAGACATGAG | + |
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Preference number: 5 (lower is better) Translates to: KNYEESSFLRLFHSDYPQPQLFH*FQSRHE Trigger: CTCATGTCTGGATTGGAACAAATGGAAGAGCTGAGG...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS TCA 90 bp | AATATTCAACATGCGAGTCTCATTTATGGACGACGTGCCTACTTGTaGGACCTCTCTGTGAGTAAGCATATTTTGAATAGGTTTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: NIQHASLIYGRRAYL*DLSVSKHILNRFRM Trigger: CATTCTAAACCTATTCAAAATATGCTTACTCACAGAGAGGTCTCACAAGTAGGCACGTCGTCCATAAATGAGACTCGCATGTTGAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS-3UTR CAA 90 bp | AAAAACTATGAGGAAAGTTCTTTCTTAAGGCTTTTCCACTCTGATTATCCTCAGGTTCTCCAACAGTCTTaGCATTCACACAATTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KNYEESSFLRLFHSDYPQVLQQS*HSHNFS Trigger: AGAGAAATTGTGTGAATGCAAAGACTGTTGGAGAAC...CTGAGGATAATCAGAGTGGAAAAGCCTTAAGAAAGAACTTTCCTCATAGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586293.5 ENST00000589453.5 |
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| CDS TCA 72 bp | TGCCCCGCCCTGCCTAGGTTGAGCATGAGCGCTGGCTaGGGTGAAAACCCAGCTAGGAAGCTGCTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CPALPRLSMSAG*GENPARKLLES Trigger: GCTCTCCAGCAGCTTCCTAGCTGGGTTTTCACCTCAGCCAGCGCTCATGCTCAACCTAGGCAGGGCGGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588267.5 ENST00000592859.1 |
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| CDS TCA 72 bp | GCTTCTCTCCGGAACGCACTGCAATCGCCCTGTCGGTaGCAAGAGGACGCTGGGGCCCTTTTCCACAACAGC | + |
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Preference number: 6 (lower is better) Translates to: ASLRNALQSPCR*QEDAGALFHNS Trigger: GCTGTTGTGGAAAAGGGCCCCAGCGTCCTCTTGTCACCGACAGGGCGATTGCAGTGCGTTCCGGAGAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592859.1 |
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| CDS GCA 72 bp | GGGGTGGCTCTTCCATCTCATGGCCTCCCTGACTCGTaGTGCGGAGAACCGGCAATCATCCTCCTGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GVALPSHGLPDS*CGEPAIILLHL Trigger: AAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS CCA 72 bp | CGCACTGCAATCGCCCTGTCGGTGACAAGAGGACGCTaGGGCCCTTTTCCACAACAGCTGAGATGCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RTAIALSVTRGR*GPFPQQLRCFS Trigger: GGAAAAGCATCTCAGCTGTTGTGGAAAAGGGCCCCAGCGTCCTCTTGTCACCGACAGGGCGATTGCAGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000397902.6 ENST00000588267.5 ENST00000589453.5 ENST00000592859.1 |
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| CDS GCA 72 bp | GTGGCTCTTCCATCTCATGGCCTCCCTGACTCGTGCTaGGGAGAACCGGCAATCATCCTCCTGCATCTTACT | + |
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Preference number: 6 (lower is better) Translates to: VALPSHGLPDSC*GEPAIILLHLT Trigger: AGTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAGGGAGGCCATGAGATGGAAGAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS GCA 72 bp | CTGACTCGTGCTGCGGAGAACCGGCAATCATCCTCCTaGATCTTACTCTCTTCCGGCCAGCAGATTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LTRAAENRQSSS*ILLSSGQQIVF Trigger: GAAAACAATCTGCTGGCCGGAAGAGAGTAAGATGCAGGAGGATGATTGCCGGTTCTCCGCAGCACGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS GCA 72 bp | CCCCAACTTTATTCCGCTTTGCAGCTATCTTTTTGGTaGTACATGGTCTTCTGGTCTGGTCGCAAAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PQLYSALQLSFW*YMVFWSGRKGW Trigger: CCAGCCTTTGCGACCAGACCAGAAGACCATGTAGCACCAAAAAGATAGCTGCAAAGCGGAATAAAGTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS CAA 90 bp | CAAGTTCATGAAACTCAGAAACTCTCTCCTGAAGGGTGGCTTCTCTaGGGCATAGACAAGGAGAACCTTGTCTCCAGGTTCTTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: QVHETQKLSPEGWLL*GIDKENLVSRFFPL Trigger: CAATGGGAAGAACCTGGAGACAAGGTTCTCCTTGTCTATGCCCAAGAGAAGCCACCCTTCAGGAGAGAGTTTCTGAGTTTCATGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS GCA 72 bp | ATATCTTGCAGCAGTGGGGAGCCTTTGGTTTTGAGTTaGAAATCCAATTCCTGCAGAACTCCTGTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: ISCSSGEPLVLS*KSNSCRTPVTP Trigger: AGGAGTGACAGGAGTTCTGCAGGAATTGGATTTGCAACTCAAAACCAAAGGCTCCCCACTGCTGCAAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397902.6 ENST00000589412.5 ENST00000592587.1 |
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| CDS CCA 72 bp | TTTCCCCAACTTTATTCCGCTTTGCAGCTATCTTTTTaGTGCTACATGGTCTTCTGGTCTGGTCGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FPQLYSALQLSF*CYMVFWSGRKG Trigger: GCCTTTGCGACCAGACCAGAAGACCATGTAGCACCAAAAAGATAGCTGCAAAGCGGAATAAAGTTGGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS CAA 72 bp | TCCATCAGTAATCCATCAGTAACCCAGCCACTAGCCTaGGCTTCTCGATGTTCCTGTCATGAAGACAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SISNPSVTQPLA*ASRCSCHEDRK Trigger: CTTTCTGTCTTCATGACAGGAACATCGAGAAGCCAAGGCTAGTGGCTGGGTTACTGATGGATTACTGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000397902.6 ENST00000586293.5 ENST00000586814.5 ENST00000587650.1 ENST00000588267.5 ENST00000589412.5 ENST00000589453.5 ENST00000590471.1 ENST00000592587.1 |
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| CDS TCA 72 bp | CAGAAATATCTTGCAGCAGTGGGGAGCCTTTGGTTTTaGGTTGCAAATCCAATTCCTGCAGAACTCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QKYLAAVGSLWF*VANPIPAELLS Trigger: TGACAGGAGTTCTGCAGGAATTGGATTTGCAACTCAAAACCAAAGGCTCCCCACTGCTGCAAGATATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397902.6 ENST00000589412.5 ENST00000592587.1 |
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| CDS TCA 72 bp | CATGCGAGTCTCATTTATGGACGACGTGCCTACTTGTaGGACCTCTCTGTGAGTAAGCATATTTTGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: HASLIYGRRAYL*DLSVSKHILNR Trigger: CCTATTCAAAATATGCTTACTCACAGAGAGGTCTCACAAGTAGGCACGTCGTCCATAAATGAGACTCGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589038.1 |
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| CDS CAA 90 bp | CATGCAAGACATAACACCATGTCCTTCAATGGGGAACCAATACTTTaGCCTTCGGGGATTCTAAAGATGGTCAAGTGTAACTTTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: HARHNTMSFNGEPIL*PSGILKMVKCNFTN Trigger: ATTTGTAAAGTTACACTTGACCATCTTTAGAATCCCCGAAGGCAAAAGTATTGGTTCCCCATTGAAGGACATGGTGTTATGTCTTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591377.1 |
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| CDS CAA 72 bp | TCTTCCATTTGTTCCAATCCAGACATGAGACTACGTTaGAATAATTCAGACCCTAGTATAATGAGATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSICSNPDMRLR*NNSDPSIMRFL Trigger: CAAGAATCTCATTATACTAGGGTCTGAATTATTCAAACGTAGTCTCATGTCTGGATTGGAACAAATGGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588267.5 ENST00000589412.5 |
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