Pregenerated sensors for ZNF84-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000246394

Ensembl transcript IDs: ENST00000443154.3, ENST00000592296.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAGACTAACTCTGGATCCACCAGGCCAGGTGTCGTGTACAGAGGCTaGGGCAGCCATCCCCAACTCCAATGCCCAGTGCCCAGCACACCA	+
Preference number: 5 (lower is better) Translates to: KTNSGSTRPGVVYRG*GSHPQLQCPVPSTP Trigger: TGGTGTGCTGGGCACTGGGCATTGGAGTTGGGGATGGCTGCCCCAGCCTCTGTACACGACACCTGGCCTGGTGGATCCAGAGTTAGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CCA 90 bp	ACTAAAGGTATATCTGACAATTTAAAATTGTGTCTAGGGAGTGGCTaGAGTGGCAGCTGGGCAGCAAGACTAACTCTGGATCCACCAGGC	+
Preference number: 5 (lower is better) Translates to: TKGISDNLKLCLGSG*SGSWAARLTLDPPG Trigger: GCCTGGTGGATCCAGAGTTAGTCTTGCTGCCCAGCTGCCACTCCAGCCACTCCCTAGACACAATTTTAAATTGTCAGATATACCTTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CCA 72 bp	TCTGGATCCACCAGGCCAGGTGTCGTGTACAGAGGCTaGGGCAGCCATCCCCAACTCCAATGCCCAGTGCCC	+
Preference number: 6 (lower is better) Translates to: SGSTRPGVVYRG*GSHPQLQCPVP Trigger: GGGCACTGGGCATTGGAGTTGGGGATGGCTGCCCCAGCCTCTGTACACGACACCTGGCCTGGTGGATCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CAA 72 bp	ATCCATGATGGCATGAACAGAGGCCTGGTTGGCATCTaGAGTGAGCTGTTTCCTTCAGCTGCCCTCTGTTTC	+
Preference number: 6 (lower is better) Translates to: IHDGMNRGLVGI*SELFPSAALCF Trigger: GAAACAGAGGGCAGCTGAAGGAAACAGCTCACTCAAGATGCCAACCAGGCCTCTGTTCATGCCATCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592296.5
CDS TCA 72 bp	GATTCGGTTTCCCTTTATGTTTCTCAGAAAACCGTGTaGGCCCGTTTGGAGTCACTCCGTCTCCAAGCGACA	+
Preference number: 6 (lower is better) Translates to: DSVSLYVSQKTV*ARLESLRLQAT Trigger: TGTCGCTTGGAGACGGAGTGACTCCAAACGGGCTCACACGGTTTTCTGAGAAACATAAAGGGAAACCGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CAA 90 bp	ATAGATCTTATCCATGATGGCATGAACAGAGGCCTGGTTGGCATCTaGAGTGAGCTGTTTCCTTCAGCTGCCCTCTGTTTCTGGCCTTCT	+
Preference number: 6 (lower is better) Translates to: IDLIHDGMNRGLVGI*SELFPSAALCFWPS Trigger: AGAAGGCCAGAAACAGAGGGCAGCTGAAGGAAACAGCTCACTCAAGATGCCAACCAGGCCTCTGTTCATGCCATCATGGATAAGATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592296.5
CDS CCA 72 bp	ATATCTGACAATTTAAAATTGTGTCTAGGGAGTGGCTaGAGTGGCAGCTGGGCAGCAAGACTAACTCTGGAT	+
Preference number: 6 (lower is better) Translates to: ISDNLKLCLGSG*SGSWAARLTLD Trigger: ATCCAGAGTTAGTCTTGCTGCCCAGCTGCCACTCCAGCCACTCCCTAGACACAATTTTAAATTGTCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CCA 72 bp	GAGACGCCGTCTCAAGAAAATATATATATATATTGGTaGATTCGGTTTCCCTTTATGTTTCTCAGAAAACCG	+
Preference number: 6 (lower is better) Translates to: ETPSQENIYIYW*IRFPFMFLRKP Trigger: CGGTTTTCTGAGAAACATAAAGGGAAACCGAATCCACCAATATATATATATATTTTCTTGAGACGGCGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443154.3
CDS CCA 72 bp	AGCGAGACGCCGTCTCAAGAAAATATATATATATATTaGTGGATTCGGTTTCCCTTTATGTTTCTCAGAAAA	+
Preference number: 6 (lower is better) Translates to: SETPSQENIYIY*WIRFPFMFLRK Trigger: TTTTCTGAGAAACATAAAGGGAAACCGAATCCACCAATATATATATATATTTTCTTGAGACGGCGTCTCGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443154.3