RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF84 (Homo sapiens)

Ensembl gene IDs: ENSG00000198040

Ensembl transcript IDs: ENST00000327668.11, ENST00000392319.6, ENST00000438628.6, ENST00000441040.2, ENST00000535439.2, ENST00000536123.5, ENST00000539098.5, ENST00000539354.6, ENST00000539686.5, ENST00000540031.5, ENST00000542358.1, ENST00000542874.5, ENST00000543124.1, ENST00000543310.5, ENST00000543758.5, ENST00000545299.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGGTTTTGCCATGTTGGCCATGAACATGCTGGTCTTCAACTCCTaGCCTCAAGTGATCCACTTGAGGTCTCCACTTGAGGTCCTCAGC +
Preference number: 1 (lower is better)
Translates to: QGFAMLAMNMLVFNS*PQVIHLRSPLEVLS
Trigger: GCTGAGGACCTCAAGTGGAGACCTCAAGTGGATCACTTGAGGTCAGGAGTTGAAGACCAGCATGTTCATGGCCAACATGGCAAAACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CCA 90 bp ATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATGGTTaGTTATCAGCAGTTAGGCCAGGGGTAGGTGTTGAACATCTGAAA +
Preference number: 1 (lower is better)
Translates to: IARCRKHACICKGYG*LSAVRPGVGVEHLK
Trigger: TTTCAGATGTTCAACACCTACCCCTGGCCTAACTGCTGATAACCAACCATAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR TCA 90 bp TTTGAGATCCACTGCAGTCATAGGTTCACTCTACTCTATGAATTATaGTCGGCTTTCCATACACCACCTCATTTAGAGTTCTCATCCTCA +
Preference number: 1 (lower is better)
Translates to: FEIHCSHRFTLLYEL*SAFHTPPHLEFSSS
Trigger: TGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGTGGATCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGCCAGGGGTAGGTGTTaGACATCTGAAAGCTCATTG +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLARGRC*TSESSL
Trigger: CAATGAGCTTTCAGATGTTCAACACCTACCCCTGGC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CAA 90 bp CAGAAGAACCAGGTACTGGAACACAATCGGGACTCTTTCTTGATTTaGCTTTCATCATGGCTTCATTCTTCTCTCTCACTGCAGACCATG +
Preference number: 2 (lower is better)
Translates to: QKNQVLEHNRDSFLI*LSSWLHSSLSLQTM
Trigger: CATGGTCTGCAGTGAGAGAGAAGAATGAAGCCATGATGAAAGCAAAATCAAGAAAGAGTCCCGATTGTGTTCCAGTACCTGGTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CAA 90 bp GAAGACCAGAAGAACCAGGTACTGGAACACAATCGGGACTCTTTCTaGATTTTGCTTTCATCATGGCTTCATTCTTCTCTCTCACTGCAG +
Preference number: 2 (lower is better)
Translates to: EDQKNQVLEHNRDSF*ILLSSWLHSSLSLQ
Trigger: CTGCAGTGAGAGAGAAGAATGAAGCCATGATGAAAGCAAAATCAAGAAAGAGTCCCGATTGTGTTCCAGTACCTGGTTCTTCTGGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACTTGAGGTCTCCACTTaGGGTCCTCAGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKLEVST*GPQPPK
Trigger: TTTGGGAGGCTGAGGACCTCAAGTGGAGACCTCAAG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGACACCTAACATGACGTaGCTGTCTACAAACGTTATC +
Preference number: 2 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRTPNMT*LSTNVI
Trigger: GATAACGTTTGTAGACAGTCACGTCATGTTAGGTGT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATACAAACACCTAACATaGCGTGACTGTCTACAAACG +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLYKHLT*RDCLQT
Trigger: CGTTTGTAGACAGTCACGTCATGTTAGGTGTTTGTA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACTGGACATAGATTGCTaGAATGACCAAATGACTGCA +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLLDIDC*NDQMTA
Trigger: TGCAGTCATTTGGTCATTCCAGCAATCTATGTCCAG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACACACCTAACATGACGTaGCTGTCTACAAACGTTATC +
Preference number: 2 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHTPNMT*LSTNVI
Trigger: GATAACGTTTGTAGACAGTCACGTCATGTTAGGTGT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTACAAACACCTAACATaGCGTGACTGTCTACAAACG +
Preference number: 2 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHYKHLT*RDCLQT
Trigger: CGTTTGTAGACAGTCACGTCATGTTAGGTGTTTGTA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGTTCACTCTACTCTATaGATTATGATCGGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRVHSTL*IMIGFP
Trigger: TGGAAAGCCGATCATAATTCATAGAGTAGAGTGAAC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGTTTTTGAGATCCACTaGAGTCATAGGTTCACTCTA +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLVFEIH*SHRFTL
Trigger: TAGAGTGAACCTATGACTGCAGTGGATCTCAAAAAC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAACGGCATTCTGTGGGTaGATTTTATGTCAACATTCT +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLTAFCG*ILCQHS
Trigger: AGAATGTTGACATAAAATGCACCCACAGAATGCCGT...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGCTGGAATGACCAAATaGCTGCAGAGGTCTCAAATG +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYAGMTK*LQRSQM
Trigger: CATTTGAGACCTCTGCAGTCATTTGGTCATTCCAGC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACACAGGATTCTTCTTTaGTGTGAATGTTCTACTCTA +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLHRILL*CECSTL
Trigger: TAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGCACAGGATTCTTCTTTaGTGTGAATGTTCTACTCTA +
Preference number: 2 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRHRILL*CECSTL
Trigger: TAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTG...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAAGTTCTAGTGATTACTaGACAACGTATTTGAACCTC +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLSSSDY*TTYLNL
Trigger: GAGGTTCAAATACGTTGTGCAGTAATCACTAGAACT...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATGGCCTCCTTTAGTATaGTATCTCAATGTACCTTAT +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLWPPLV*YLNVPY
Trigger: ATAAGGTACATTGAGATAGCATACTAAAGGAGGCCA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTACAAACACCTAACATaGCGTGACTGTCTACAAACG +
Preference number: 2 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAYKHLT*RDCLQT
Trigger: CGTTTGTAGACAGTCACGTCATGTTAGGTGTTTGTA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATCTGTTACTCAGACTCTaGGGATGCAGAAGACTTACA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYLLLRL*GCRRLT
Trigger: TGTAAGTCTTCTGCATCCTCAGAGTCTGAGTAACAG...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATACTTAGCTAAGGGATaGTTCATGCATTTTTATGGA +
Preference number: 2 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLYLAKG*FMHFYG
Trigger: TCCATAAAAATGCATGAACCATCCCTTAGCTAAGTA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATACAATTCCAGGTCAGTaGGAAAATCCAGGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYTIPGQ*ENPGSK
Trigger: CTTACTGCCTGGATTTTCCCACTGACCTGGAATTGT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CAA 90 bp GGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGCTTTaGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTA +
Preference number: 2 (lower is better)
Translates to: GNISNSLRDLTSGRL*DIHRILLCCECSTL
Trigger: TAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAAGCCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTGTTCACTCTACTCTATaGATTATGATCGGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAVHSTL*IMIGFP
Trigger: TGGAAAGCCGATCATAATTCATAGAGTAGAGTGAAC...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATTGCAGAAAACATGCATaGATCTGCAAGGGTTATGGT +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYCRKHA*ICKGYG
Trigger: ACCATAACCCTTGCAGATGCATGCATGTTTTCTGCA...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGTTTTTGAGATCCACTaGAGTCATAGGTTCACTCTA +
Preference number: 2 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKVFEIH*SHRFTL
Trigger: TAGAGTGAACCTATGACTGCAGTGGATCTCAAAAAC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGTTTTTGAGATCCACTaGAGTCATAGGTTCACTCTA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYVFEIH*SHRFTL
Trigger: TAGAGTGAACCTATGACTGCAGTGGATCTCAAAAAC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATTTTAAGACAGGGTTTTaGCATGTTGGCCATGAACAT +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYFKTGF*HVGHEH
Trigger: ATGTTCATGGCCAACATGGCAAAACCCTGTCTTAAA...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CAA 90 bp AGATTCCAAATGCCTACTGCTGTAGATTTTGCTAGAAAGTTACTTTaGATAAATACGGCATTCTGTGGGTGCATTTTATGTCAACATTCT +
Preference number: 2 (lower is better)
Translates to: RFQMPTAVDFARKLL*INTAFCGCILCQHS
Trigger: AGAATGTTGACATAAAATGCACCCACAGAATGCCGTATTTATCAAAAGTAACTTTCTAGCAAAATCTACAGCAGTAGGCATTTGGAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGTTGGCTTCAGTTACTaGATAGAAAGGTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYVGFSY*IERSIK
Trigger: TTTTATGGACCTTTCTATTCAGTAACTGAAGCCAAC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAACTATGGTTATTCTGTaGTTCCTGCCTTTGCATATT +
Preference number: 2 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKTMVIL*FLPLHI
Trigger: AATATGCAAAGGCAGGAACCACAGAATAACCATAGT...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATACTATGGTTATTCTGTaGTTCCTGCCTTTGCATATT +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYTMVIL*FLPLHI
Trigger: AATATGCAAAGGCAGGAACCACAGAATAACCATAGT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATTTCATTTGCATTAGTTaGTCTCCCACGTCTAGTAAA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYFICIS*SPTSSK
Trigger: TTTACTAGACGTGGGAGACCAACTAATGCAAATGAA...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATAAATACGGCATTCTGTaGGTGCATTTTATGTCAACA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYKYGIL*VHFMST
Trigger: TGTTGACATAAAATGCACCCACAGAATGCCGTATTT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGCACTAAAAGGCATATaGATTTCATACTCCCAATTA +
Preference number: 2 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKALKGI*ISYSQL
Trigger: TAATTGGGAGTATGAAATGCATATGCCTTTTAGTGC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGCACTAAAAGGCATATaGATTTCATACTCCCAATTA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYALKGI*ISYSQL
Trigger: TAATTGGGAGTATGAAATGCATATGCCTTTTAGTGC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAATACTTAGCTAAGGGATaGTTCATGCATTTTTATGGA +
Preference number: 2 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKYLAKG*FMHFYG
Trigger: TCCATAAAAATGCATGAACCATCCCTTAGCTAAGTA...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATCATCTGAAAGCTCATTaGTACCTGTATAGACTAATA +
Preference number: 2 (lower is better)
Translates to: VIIEISRNYKLFTEARKYHLKAH*YLYRLI
Trigger: TATTAGTCTATACAGGTACCAATGAGCTTTCAGATG...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR TCA 72 bp TGGTACCCATGTCTACAAAAAGTGTATGGCTTCCCTTaGCAGTACTATACTGAGGGGCAAGTGTTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: WYPCLQKVYGFP*QYYTEGQVFPV
Trigger: CACTGGGAACACTTGCCCCTCAGTATAGTACTGTCAAGGGAAGCCATACACTTTTTGTAGACATGGGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR CCA 72 bp TGCAGAAAACATGCATGCATCTGCAAGGGTTATGGTTaGTTATCAGCAGTTAGGCCAGGGGTAGGTGTTGAA +
Preference number: 3 (lower is better)
Translates to: CRKHACICKGYG*LSAVRPGVGVE
Trigger: TTCAACACCTACCCCTGGCCTAACTGCTGATAACCAACCATAACCCTTGCAGATGCATGCATGTTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CAA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACTTACAATGGGTTTATaGGGAGGTAACCCCACTGTA +
Preference number: 3 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLLTMGL*GGNPTV
Trigger: TACAGTGGGGTTACCTCCCAATAAACCCATTGTAAG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR TCA 72 bp AGATCCTGCAAGAAAAAGTCACACAGAAGGCAATCCTaGTACAGGTCTCAAAATTCAGTCTGGACCTTAAGG +
Preference number: 3 (lower is better)
Translates to: RSCKKKSHRRQS*YRSQNSVWTLR
Trigger: CCTTAAGGTCCAGACTGAATTTTGAGACCTGTATCAGGATTGCCTTCTGTGTGACTTTTTCTTGCAGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR GCA 72 bp AAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTaGAAGGGTTATGGTTGGTTATCAGCAGTTAGGCCA +
Preference number: 3 (lower is better)
Translates to: KMIARCRKHACI*KGYGWLSAVRP
Trigger: TGGCCTAACTGCTGATAACCAACCATAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR GCA 72 bp AAAGGAAAACAATGTCAATTGTCCTTTGTAGAACTGTaGACAATTCCAGGTCAGTGGGAAAATCCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: KGKQCQLSFVEL*TIPGQWENPGS
Trigger: ACTGCCTGGATTTTCCCACTGACCTGGAATTGTGCACAGTTCTACAAAGGACAATTGACATTGTTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR TCA 72 bp ACAAAAAGTGTATGGCTTCCCTTGACAGTACTATACTaGGGGGCAAGTGTTCCCAGTGTCTTTAAATTGTTA +
Preference number: 3 (lower is better)
Translates to: TKSVWLPLTVLY*GASVPSVFKLL
Trigger: TAACAATTTAAAGACACTGGGAACACTTGCCCCTCAGTATAGTACTGTCAAGGGAAGCCATACACTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR TCA 72 bp TCTCATCCTCATGGAGTACAAACACCTAACATGACGTaGCTGTCTACAAACGTTATCATAATTGCATTTCCT +
Preference number: 3 (lower is better)
Translates to: SHPHGVQTPNMT*LSTNVIIIAFP
Trigger: AGGAAATGCAATTATGATAACGTTTGTAGACAGTCACGTCATGTTAGGTGTTTGTACTCCATGAGGATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
3UTR-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAAATAGCTTAAGAGACTaGACTTCTGGAAGGCTTTTG +
Preference number: 3 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKNSLRD*TSGRLL
Trigger: CAAAAGCCTTCCAGAAGTCAAGTCTCTTAAGCTATT...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGTCAACCACTTAGAATaGGGTATTTTTGGTACCCAT +
Preference number: 3 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKVNHLE*GIFGTH
Trigger: ATGGGTACCAAAAATACCCAATTCTAAGTGGTTGAC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CAA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGAAAGACAGAATTATTaGGCTGTTGAACTGGTATTC +
Preference number: 3 (lower is better)
Translates to: VIIEISRNYKLFTEARKYERQNY*AVELVF
Trigger: GAATACCAGTTCAACAGCCAAATAATTCTGTCTTTC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGAAAGACAGAATTATTaGGCTGTTGAACTGGTATTC +
Preference number: 3 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKERQNY*AVELVF
Trigger: GAATACCAGTTCAACAGCCAAATAATTCTGTCTTTC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
3UTR CCA 72 bp AGTAAGAGAATAAGAAAAGATGATGCTTCCTGTATTTaGCCTCCTTTAGTATGCTATCTCAATGTACCTTAT +
Preference number: 3 (lower is better)
Translates to: SKRIRKDDASCI*PPLVCYLNVPY
Trigger: ATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATACAGGAAGCATCATCTTTTCTTATTCTCTTACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGGACGCCCAGGGCCTTaGAGCCGAAGCTCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRGRPGP*SRSSPR
Trigger: CCGCGGGGAGCTTCGGCTTCAAGGCCCTGGGCGTCC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGCCTCCACGCCCGCCTaGAAGGACGCCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLASTPA*KDAQER
Trigger: CCGCTCCTGGGCGTCCTTTCAGGCGGGCGTGGAGGC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGCGGCAGAGCCAGGCTaGTGGTGGATGCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLAAEPG*WWMRSS
Trigger: GCTGGACCGCATCCACCAGCAGCCTGGCTCTGCCGC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGCGCGGCAAGCGGGCTaGCCCGAGGTCGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRARQAG*PEVEAK
Trigger: TTTAGCCTCGACCTCGGGCCAGCCCGCTTGCCGCGC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTACCTCCGGAAAGGCCGTaGCCGCCCCACAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLPPERP*PPHSPE
Trigger: TTCTGGGCTGTGGGGCGGGCACGGCCTTTCCGGAGG...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAACCGTCGGCCTTTGTaGGCTCCCGGGCGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLNRRPL*APGRLR
Trigger: TCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392319.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAGGACGAGTCGGGGACTaGACACGCGCACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLGRVGD*TRAHSH
Trigger: GTGCGAGTGTGCGCGTGTGCAGTCCCCGACTCGTCC...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392319.6
ENST00000543758.5
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTAAACGCGCCCGAGGCTaGCGCCTCCACGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTKRARG*RLHARL
Trigger: CAGGCGGGCGTGGAGGCGCCAGCCTCGGGCGCGTTT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGGACGAGTCGGGGACTaGACACGCGCACACTCGCAC +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWGRVGD*TRAHSH
Trigger: GTGCGAGTGTGCGCGTGTGCAGTCCCCGACTCGTCC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392319.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTAACCGTCGGCCTTTGTaGGCTCCCGGGCGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKANRRPL*APGRLR
Trigger: TCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392319.6
ENST00000543758.5
CDS-3UTR CCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGCAGAGCCAGGCTGCTaGTGGATGCGGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIAEPGC*WMRSSR
Trigger: CCTGCTGGACCGCATCCACCAGCAGCCTGGCTCTGC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGAGGGACCAGGATCTGTaGAAAAAGACGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRRDQDL*KKTPPP
Trigger: CGGCGGCGGCGTCTTTTTCCACAGATCCTGGTCCCT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539354.6
CDS-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACAGGCTGCTGGTGGATaGGGTCCAGCAGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKQAAGG*GPAGQP
Trigger: CGGCTGCCCTGCTGGACCGCATCCACCAGCAGCCTG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACTTGAGGTCTCCACTTaGGGTCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLLEVST*GPQPPK
Trigger: TTTGGGAGGCTGAGGACCTCAAGTGGAGACCTCAAG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGAGCCAGGCTGCTGGTaGATGCGGTCCAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYEPGCW*MRSSRA
Trigger: TGCCCTGCTGGACCGCATCCACCAGCAGCCTGGCTC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGATGATCAGCAAGGCTaGGATCGGTTCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLDDQQG*DRFYCA
Trigger: CGCACAGTAGAACCGATCTCAGCCTTGCTGATCATC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLCCCTR*SARLRS
Trigger: CGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GCCACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGATGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: ATSCYHLLSRLHEWEIGRCCCTR*SARLRS
Trigger: CGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCA...TCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCTTGAGGTCTCCACTTaGGGTCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWLEVST*GPQPPK
Trigger: TTTGGGAGGCTGAGGACCTCAAGTGGAGACCTCAAG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWCCCTR*SARLRS
Trigger: CGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGATGGGATGTGAGCTGTaGCTTTTGGGAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRMGCEL*LLGEGF
Trigger: AAAGCCTTCTCCCAAAAGTCACAGCTCACATCCCAT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGCTGGAATGACCAAATaGCTGCAGAGGTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLAGMTK*LQRSQM
Trigger: CATTTGAGACCTCTGCAGTCATTTGGTCATTCCAGC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATCAACAATCAAGACATaGAAAGGGCAGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLSTIKT*KGQRWT
Trigger: GGTCCACCTCTGCCCTTTTCATGTCTTGATTGTTGA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAGATCGGTTCTACTGTaGGTCTCTTCTGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLRSVLL*VSSASA
Trigger: GGCAGAAGCAGAAGAGACGCACAGTAGAACCGATCT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACAGATCGGTTCTACTGTaGGTCTCTTCTGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHRSVLL*VSSASA
Trigger: GGCAGAAGCAGAAGAGACGCACAGTAGAACCGATCT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTGATGATCAGCAAGGCTaGGATCGGTTCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKADDQQG*DRFYCA
Trigger: CGCACAGTAGAACCGATCTCAGCCTTGCTGATCATC...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKACCCTR*SARLRS
Trigger: CGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAATGGGATGTGAGCTGTaGCTTTTGGGAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLMGCEL*LLGEGF
Trigger: AAAGCCTTCTCCCAAAAGTCACAGCTCACATCCCAT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGATGAGTTGCAAGACTTaGCTTCTCACCAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRMSCKT*LLTKGL
Trigger: AAGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCAT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTATTGACAGTACTATACTaGGGGGCAAGTGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLLTVLY*GASVPS
Trigger: ACTGGGAACACTTGCCCCTCAGTATAGTACTGTCAA...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGTGTATGGCTTCCCTTaGCAGTACTATACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIVYGFP*QYYTEG
Trigger: CCCCTCAGTATAGTACTGTCAAGGGAAGCCATACAC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTCTTGAGGTCTCCACTTaGGGTCCTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTLEVST*GPQPPK
Trigger: TTTGGGAGGCTGAGGACCTCAAGTGGAGACCTCAAG...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAGCTGGAATGACCAAATaGCTGCAGAGGTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLAGMTK*LQRSQM
Trigger: CATTTGAGACCTCTGCAGTCATTTGGTCATTCCAGC...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGCCAGGGGTAGGTGTTaGACATCTGAAAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIARGRC*TSESSL
Trigger: CAATGAGCTTTCAGATGTTCAACACCTACCCCTGGC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGACTGTGCGTCTCTTCTaGTTCTGCCCCAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWTVRLF*FCPKTV
Trigger: CACAGTTTTGGGGCAGAAGCAGAAGAGACGCACAGT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGTCTGGGGAAAGGTTTTaGCACAATTACCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRSGERF*HNYHSQ
Trigger: TTGGCTGTGGTAATTGTGGCAAAACCTTTCCCCAGA...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTACGACCTCTCTCTAAATaGTTTCCTACACTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLRPLSK*FPTLAA
Trigger: TGCAGCGAGTGTAGGAAAGCATTTAGAGAGAGGTCG...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCGACCTCTCTCTAAATaGTTTCCTACACTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHRPLSK*FPTLAA
Trigger: TGCAGCGAGTGTAGGAAAGCATTTAGAGAGAGGTCG...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATCCTTTGTAGAACTGTaGACAATTCCAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLSFVEL*TIPGQW
Trigger: CCACTGACCTGGAATTGTGCACAGTTCTACAAAGGA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGACAATTCCAGGTCAGTaGGAAAATCCAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRTIPGQ*ENPGSK
Trigger: CTTACTGCCTGGATTTTCCCACTGACCTGGAATTGT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGTGCAAGGGTTATGGTTaGTTATCAGCAGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRCKGYG*LSAVRP
Trigger: TGGCCTAACTGCTGATAACCAACCATAACCCTTGCA...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GCCACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAGTAGTGTCATACTATaGAGGTCCCTGGAGAATCTG +
Preference number: 4 (lower is better)
Translates to: ATSCYHLLSRLHEWEIGRSSVIL*RSLENL
Trigger: CAGATTCTCCAGGGACCTCCATAGTATGACACTACT...TCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR TCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGATGATCAGCAAGGCTaGGATCGGTTCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKDDQQG*DRFYCA
Trigger: CGCACAGTAGAACCGATCTCAGCCTTGCTGATCATC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTCCCTR*SARLRS
Trigger: CGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACATGAGTTGCAAGACTTaGCTTCTCACCAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHMSCKT*LLTKGL
Trigger: AAGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCAT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGATGTGGTATAAGGTGTaGCTTCCGAGAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRMWYKV*LPRESF
Trigger: AAAGCTTTCTCTCGGAAGTCACACCTTATACCACAT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAATGATTAACCAGCTGTaGCTTCTGAGAGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLMINQL*LLREGL
Trigger: AAGGCCTTCTCTCAGAAGTCACAGCTGGTTAATCAT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTGTGTATGGCTTCCCTTaGCAGTACTATACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAVYGFP*QYYTEG
Trigger: CCCCTCAGTATAGTACTGTCAAGGGAAGCCATACAC...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCTGTTACTCAGACTCTaGGGATGCAGAAGACTTACA +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHLLLRL*GCRRLT
Trigger: TGTAAGTCTTCTGCATCCTCAGAGTCTGAGTAACAG...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACACAGAAGGCAATCCTaGTACAGGTCTCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLHRRQS*YRSQNS
Trigger: TGAATTTTGAGACCTGTATCAGGATTGCCTTCTGTG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGCTGGAATGACCAAATaGCTGCAGAGGTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIAGMTK*LQRSQM
Trigger: CATTTGAGACCTCTGCAGTCATTTGGTCATTCCAGC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTAGATCGGTTCTACTGTaGGTCTCTTCTGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKARSVLL*VSSASA
Trigger: GGCAGAAGCAGAAGAGACGCACAGTAGAACCGATCT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATAGATCGGTTCTACTGTaGGTCTCTTCTGCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSCYHLLSRLHEWEIGRNRSVLL*VSSASA
Trigger: GGCAGAAGCAGAAGAGACGCACAGTAGAACCGATCT...ATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTATCTGGGGAAAGGTTTTaGCACAATTACCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLSGERF*HNYHSQ
Trigger: TTGGCTGTGGTAATTGTGGCAAAACCTTTCCCCAGA...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTATCCTTTGTAGAACTGTaGACAATTCCAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLSFVEL*TIPGQW
Trigger: CCACTGACCTGGAATTGTGCACAGTTCTACAAAGGA...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGTTGTCTTGGTTATCCTaGTGCCACATCATGTTACCA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRLSWLS*CHIMLP
Trigger: TGGTAACATGATGTGGCACCAGGATAACCAAGACAA...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACAGAAGAACCAGGTACTaGAACACAATCGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHRRTRY*NTIGTL
Trigger: AAGAGTCCCGATTGTGTTCCAGTACCTGGTTCTTCT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAGAAGAACCAGGTACTaGAACACAATCGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLRRTRY*NTIGTL
Trigger: AAGAGTCCCGATTGTGTTCCAGTACCTGGTTCTTCT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACGACTTCTGGAGAATCTaGACTTGGAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHDFWRI*TWNFSI
Trigger: GATGGAGAAATTCCAAGTTCAGATTCTCCAGAAGTC...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGACTTGGTTTCTTACTaGAGCGCTTCCTACATTCAC +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIDLVSY*SASYIH
Trigger: GTGAATGTAGGAAGCGCTTCAGTAAGAAACCAAGTC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGACTTGGTTTCTTACTaGAGCGCTTCCTACATTCAC +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWDLVSY*SASYIH
Trigger: GTGAATGTAGGAAGCGCTTCAGTAAGAAACCAAGTC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTATGGGATGTGAGCTGTaGCTTTTGGGAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAMGCEL*LLGEGF
Trigger: AAAGCCTTCTCCCAAAAGTCACAGCTCACATCCCAT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTATGAGTTGCAAGACTTaGCTTCTCACCAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIMSCKT*LLTKGL
Trigger: AAGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCAT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAATGATTGATGAGACTTaGCTTCTCCCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLMIDET*LLPEGF
Trigger: AAAGCCTTCAGGGAGAAGTCAAGTCTCATCAATCAT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACATGTGGTATAAGGTGTaGCTTCCGAGAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHMWYKV*LPRESF
Trigger: AAAGCTTTCTCTCGGAAGTCACACCTTATACCACAT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAATGTGGTATAAGGTGTaGCTTCCGAGAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLMWYKV*LPRESF
Trigger: AAAGCTTTCTCTCGGAAGTCACACCTTATACCACAT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAACACCTAACATGACGTaGCTGTCTACAAACGTTATC +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLTPNMT*LSTNVI
Trigger: GATAACGTTTGTAGACAGTCACGTCATGTTAGGTGT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTTGACAGTACTATACTaGGGGGCAAGTGTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKALTVLY*GASVPS
Trigger: ACTGGGAACACTTGCCCCTCAGTATAGTACTGTCAA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCTGTTACTCAGACTCTaGGGATGCAGAAGACTTACA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWLLLRL*GCRRLT
Trigger: TGTAAGTCTTCTGCATCCTCAGAGTCTGAGTAACAG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTACACAGAAGGCAATCCTaGTACAGGTCTCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLHRRQS*YRSQNS
Trigger: TGAATTTTGAGACCTGTATCAGGATTGCCTTCTGTG...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCATAGATTGCTGGAATaGCCAAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWHRLLE*PNDCRG
Trigger: ACCTCTGCAGTCATTTGGTCATTCCAGCAATCTATG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGCCAGGGGTAGGTGTTaGACATCTGAAAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKARGRC*TSESSL
Trigger: CAATGAGCTTTCAGATGTTCAACACCTACCCCTGGC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp ACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATGGTCCCTGGAGAATCTaGACTTGGAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TSCYHLLSRLHEWEIGRNGPWRI*TWNFSI
Trigger: GATGGAGAAATTCCAAGTTCAGATTCTCCAGGGACC...ATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAACTGTGCGTCTCTTCTaGTTCTGCCCCAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKTVRLF*FCPKTV
Trigger: CACAGTTTTGGGGCAGAAGCAGAAGAGACGCACAGT...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTATCTTGGTTATCCTGGTaGCACATCATGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLSWLSW*HIMLPS
Trigger: AGATGGTAACATGATGTGGCACCAGGATAACCAAGA...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTCTTGGTTATCCTGGTaGCACATCATGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHSWLSW*HIMLPS
Trigger: AGATGGTAACATGATGTGGCACCAGGATAACCAAGA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGTTTTTGAGATCCACTaGAGTCATAGGTTCACTCTA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRVFEIH*SHRFTL
Trigger: TAGAGTGAACCTATGACTGCAGTGGATCTCAAAAAC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTCCTTTGTAGAACTGTaGACAATTCCAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWSFVEL*TIPGQW
Trigger: CCACTGACCTGGAATTGTGCACAGTTCTACAAAGGA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTGCAGAGGTCTCAAATaGAGATTCCAAATGCCTACT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHCRGLK*RFQMPT
Trigger: AGTAGGCATTTGGAATCTGCATTTGAGACCTCTGCA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGAAACATGCATGCATCTaGAAGGGTTATGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRKHACI*KGYGWL
Trigger: TAACCAACCATAACCCTTGCAGATGCATGCATGTTT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTGCAGAAAACATGCATaGATCTGCAAGGGTTATGGT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHCRKHA*ICKGYG
Trigger: ACCATAACCCTTGCAGATGCATGCATGTTTTCTGCA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTATTGTCTTGGTTATCCTaGTGCCACATCATGTTACCA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLLSWLS*CHIMLP
Trigger: TGGTAACATGATGTGGCACCAGGATAACCAAGACAA...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTTGTCTTGGTTATCCTaGTGCCACATCATGTTACCA +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHLSWLS*CHIMLP
Trigger: TGGTAACATGATGTGGCACCAGGATAACCAAGACAA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGATGCTTCCTGTATTTaGCCTCCTTTAGTATGCTAT +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRDASCI*PPLVCY
Trigger: ATAGCATACTAAAGGAGGCCAAATACAGGAAGCATC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTACAATTCCAGGTCAGTaGGAAAATCCAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLITIPGQ*ENPGSK
Trigger: CTTACTGCCTGGATTTTCCCACTGACCTGGAATTGT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGCTCTTGCTAGGAACTTaGAATTCACGATCATCTAAG +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRLLLGT*NSRSSK
Trigger: CTTAGATGATCGTGAATTCCAAGTTCCTAGCAAGAG...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTAGGGACCAGGATCTGTaGACTTCGGGAGAAATGTAC +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTRDQDL*TSGEMY
Trigger: GTACATTTCTCCCGAAGTCCACAGATCCTGGTCCCT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGACTTCTGGAGAATCTaGACTTGGAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWDFWRI*TWNFSI
Trigger: GATGGAGAAATTCCAAGTTCAGATTCTCCAGAAGTC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATATGGGATGTGAGCTGTaGCTTTTGGGAGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYMGCEL*LLGEGF
Trigger: AAAGCCTTCTCCCAAAAGTCACAGCTCACATCCCAT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTATGATTAACCAGCTGTaGCTTCTGAGAGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAMINQL*LLREGL
Trigger: AAGGCCTTCTCTCAGAAGTCACAGCTGGTTAATCAT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGACACCTAACATGACGTaGCTGTCTACAAACGTTATC +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWTPNMT*LSTNVI
Trigger: GATAACGTTTGTAGACAGTCACGTCATGTTAGGTGT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTACAAACACCTAACATaGCGTGACTGTCTACAAACG +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWYKHLT*RDCLQT
Trigger: CGTTTGTAGACAGTCACGTCATGTTAGGTGTTTGTA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTCACAGAAGGCAATCCTaGTACAGGTCTCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIHRRQS*YRSQNS
Trigger: TGAATTTTGAGACCTGTATCAGGATTGCCTTCTGTG...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTCATAGATTGCTGGAATaGCCAAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAHRLLE*PNDCRG
Trigger: ACCTCTGCAGTCATTTGGTCATTCCAGCAATCTATG...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATTCAACAATCAAGACATaGAAAGGGCAGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYSTIKT*KGQRWT
Trigger: GGTCCACCTCTGCCCTTTTCATGTCTTGATTGTTGA...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTCCAGACTGGAGAATCTaGACTTGGAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAPDWRI*TWNFSI
Trigger: GATGGAGAAATTCCAAGTTCAGATTCTCCAGTCTGG...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTCTGGGGAAAGGTTTTaGCACAATTACCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKASGERF*HNYHSQ
Trigger: TTGGCTGTGGTAATTGTGGCAAAACCTTTCCCCAGA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGAGTTCTAGTGATTACTaGACAACGTATTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRSSSDY*TTYLNL
Trigger: GAGGTTCAAATACGTTGTGCAGTAATCACTAGAACT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACACGGCATTCTGTGGGTaGATTTTATGTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHTAFCG*ILCQHS
Trigger: AGAATGTTGACATAAAATGCACCCACAGAATGCCGT...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTTGCAGAGGTCTCAAATaGAGATTCCAAATGCCTACT +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLICRGLK*RFQMPT
Trigger: AGTAGGCATTTGGAATCTGCATTTGAGACCTCTGCA...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCTGAGAATGAATTCCTaGTTCCAGGAACTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWLRMNS*FQELLS
Trigger: AGAAAGGAGTTCCTGGAACCAGGAATTCATTCTCAG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAATGACTCCTGTAACATaGTCATTTTCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLMTPVT*SFSAAV
Trigger: TACAGCAGCAGAAAATGACCATGTTACAGGAGTCAT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGACTATGGTTATTCTGTaGTTCCTGCCTTTGCATATT +
Preference number: 4 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRTMVIL*FLPLHI
Trigger: AATATGCAAAGGCAGGAACCACAGAATAACCATAGT...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAAAATACGGCATTCTGTaGGTGCATTTTATGTCAACA +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLKYGIL*VHFMST
Trigger: TGTTGACATAAAATGCACCCACAGAATGCCGTATTT...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTCTGGACATAGATTGCTaGAATGACCAAATGACTGCA +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLILDIDC*NDQMTA
Trigger: TGCAGTCATTTGGTCATTCCAGCAATCTATGTCCAG...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGCAAGGGTTATGGTTaGTTATCAGCAGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKACKGYG*LSAVRP
Trigger: TGGCCTAACTGCTGATAACCAACCATAACCCTTGCA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTGACTTGGTTTCTTACTaGAGCGCTTCCTACATTCAC +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTDLVSY*SASYIH
Trigger: GTGAATGTAGGAAGCGCTTCAGTAAGAAACCAAGTC...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGACTTGGTTTCTTACTaGAGCGCTTCCTACATTCAC +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYDLVSY*SASYIH
Trigger: GTGAATGTAGGAAGCGCTTCAGTAAGAAACCAAGTC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTATGATTGATGAGACTTaGCTTCTCCCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAMIDET*LLPEGF
Trigger: AAAGCCTTCAGGGAGAAGTCAAGTCTCATCAATCAT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTATGATTAACCAGCTGTaGCTTCTGAGAGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTMINQL*LLREGL
Trigger: AAGGCCTTCTCTCAGAAGTCACAGCTGGTTAATCAT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATATGATTAACCAGCTGTaGCTTCTGAGAGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYMINQL*LLREGL
Trigger: AAGGCCTTCTCTCAGAAGTCACAGCTGGTTAATCAT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAGTTGGCTTCAGTTACTaGATAGAAAGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLVGFSY*IERSIK
Trigger: TTTTATGGACCTTTCTATTCAGTAACTGAAGCCAAC...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTCATAGATTGCTGGAATaGCCAAATGACTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTHRLLE*PNDCRG
Trigger: ACCTCTGCAGTCATTTGGTCATTCCAGCAATCTATG...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTCTTGGTTATCCTGGTaGCACATCATGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKASWLSW*HIMLPS
Trigger: AGATGGTAACATGATGTGGCACCAGGATAACCAAGA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATTCTTGGTTATCCTGGTaGCACATCATGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: TSCYHLLSRLHEWEIGRNSWLSW*HIMLPS
Trigger: AGATGGTAACATGATGTGGCACCAGGATAACCAAGA...ATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR GCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTCTGGGGAAAGGTTTTaGCACAATTACCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTSGERF*HNYHSQ
Trigger: TTGGCTGTGGTAATTGTGGCAAAACCTTTCCCCAGA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGTTTTTGAGATCCACTaGAGTCATAGGTTCACTCTA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWVFEIH*SHRFTL
Trigger: TAGAGTGAACCTATGACTGCAGTGGATCTCAAAAAC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTTTAAGACAGGGTTTTaGCATGTTGGCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWFKTGF*HVGHEH
Trigger: ATGTTCATGGCCAACATGGCAAAACCCTGTCTTAAA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTGGCCTCCTTTAGTATaGTATCTCAATGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHWPPLV*YLNVPY
Trigger: ATAAGGTACATTGAGATAGCATACTAAAGGAGGCCA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGCAGAGGTCTCAAATaGAGATTCCAAATGCCTACT +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKACRGLK*RFQMPT
Trigger: AGTAGGCATTTGGAATCTGCATTTGAGACCTCTGCA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTAAACATGCATGCATCTaGAAGGGTTATGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIKHACI*KGYGWL
Trigger: TAACCAACCATAACCCTTGCAGATGCATGCATGTTT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATTTGAAGATGACATCTaGTTTCATAACTTCATACCC +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLFEDDI*FHNFIP
Trigger: GGGTATGAAGTTATGAAACCAGATGTCATCTTCAAA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GCCACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGATTTGAAGATGACATCTaGTTTCATAACTTCATACCC +
Preference number: 4 (lower is better)
Translates to: ATSCYHLLSRLHEWEIGRFEDDI*FHNFIP
Trigger: GGGTATGAAGTTATGAAACCAGATGTCATCTTCAAA...TCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR CCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTTCATTTGCATTAGTTaGTCTCCCACGTCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHFICIS*SPTSSK
Trigger: TTTACTAGACGTGGGAGACCAACTAATGCAAATGAA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGATGCTTCCTGTATTTaGCCTCCTTTAGTATGCTAT +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIDASCI*PPLVCY
Trigger: ATAGCATACTAAAGGAGGCCAAATACAGGAAGCATC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAAATACGGCATTCTGTaGGTGCATTTTATGTCAACA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLKYGIL*VHFMST
Trigger: TGTTGACATAAAATGCACCCACAGAATGCCGTATTT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTCTGGACATAGATTGCTaGAATGACCAAATGACTGCA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKALDIDC*NDQMTA
Trigger: TGCAGTCATTTGGTCATTCCAGCAATCTATGTCCAG...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTACATCTGAAAGCTCATTaGTACCTGTATAGACTAATA +
Preference number: 4 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLHLKAH*YLYRLI
Trigger: TATTAGTCTATACAGGTACCAATGAGCTTTCAGATG...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTGCAAGGGTTATGGTTaGTTATCAGCAGTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTCKGYG*LSAVRP
Trigger: TGGCCTAACTGCTGATAACCAACCATAACCCTTGCA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTAGAAGAACCAGGTACTaGAACACAATCGGGACTCTT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTRRTRY*NTIGTL
Trigger: AAGAGTCCCGATTGTGTTCCAGTACCTGGTTCTTCT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGACTTCTGGAGAATCTaGACTTGGAATTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYDFWRI*TWNFSI
Trigger: GATGGAGAAATTCCAAGTTCAGATTCTCCAGAAGTC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTATGATTGATGAGACTTaGCTTCTCCCTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTMIDET*LLPEGF
Trigger: AAAGCCTTCAGGGAGAAGTCAAGTCTCATCAATCAT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR TCA 90 bp ACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATACTTTCCAGACTTCATaGATGGGAGATAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TSCYHLLSRLHEWEIGRNTFQTS*MGDRKK
Trigger: TTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGT...ATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGAGTCTCGTTACTTGTTaGACTGTCCCATATTTAGTA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWSLVTC*TVPYLV
Trigger: TACTAAATATGGGACAGTGCAACAAGTAACGAGACT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTAGTCTCGTTACTTGTTaGACTGTCCCATATTTAGTA +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLISLVTC*TVPYLV
Trigger: TACTAAATATGGGACAGTGCAACAAGTAACGAGACT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAGCACTAAAAGGCATATaGATTTCATACTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLALKGI*ISYSQL
Trigger: TAATTGGGAGTATGAAATGCATATGCCTTTTAGTGC...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTAAACATGCATGCATCTaGAAGGGTTATGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAKHACI*KGYGWL
Trigger: TAACCAACCATAACCCTTGCAGATGCATGCATGTTT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTGCAGAAAACATGCATaGATCTGCAAGGGTTATGGT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTCRKHA*ICKGYG
Trigger: ACCATAACCCTTGCAGATGCATGCATGTTTTCTGCA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp ACATCATGTTACCATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATATGACTCCTGTAACATaGTCATTTTCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TSCYHLLSRLHEWEIGRNMTPVT*SFSAAV
Trigger: TACAGCAGCAGAAAATGACCATGTTACAGGAGTCAT...ATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATGGTAACATGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTTGTCTTGGTTATCCTaGTGCCACATCATGTTACCA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTLSWLS*CHIMLP
Trigger: TGGTAACATGATGTGGCACCAGGATAACCAAGACAA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAGACTTACACAATGTTaGCTTCAGTTACTGAATAGA +
Preference number: 4 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLRLTQC*LQLLNR
Trigger: TCTATTCAGTAACTGAAGCCAACATTGTGTAAGTCT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGACTATGGTTATTCTGTaGTTCCTGCCTTTGCATATT +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWTMVIL*FLPLHI
Trigger: AATATGCAAAGGCAGGAACCACAGAATAACCATAGT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTACTTAGCTAAGGGATaGTTCATGCATTTTTATGGA +
Preference number: 4 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHYLAKG*FMHFYG
Trigger: TCCATAAAAATGCATGAACCATCCCTTAGCTAAGTA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACTGGACATAGATTGCTaGAATGACCAAATGACTGCA +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKLDIDC*NDQMTA
Trigger: TGCAGTCATTTGGTCATTCCAGCAATCTATGTCCAG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGAGTAAAATGGAACAGTaGAAGCCTAGGTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWSKMEQ*KPRSKR
Trigger: TCTTTTAGACCTAGGCTTCCACTGTTCCATTTTACT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS-3UTR TCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATGTTCACTCTACTCTATaGATTATGATCGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYVHSTL*IMIGFP
Trigger: TGGAAAGCCGATCATAATTCATAGAGTAGAGTGAAC...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR TCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTGTTGGCTTCAGTTACTaGATAGAAAGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAVGFSY*IERSIK
Trigger: TTTTATGGACCTTTCTATTCAGTAACTGAAGCCAAC...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTCACAGGATTCTTCTTTaGTGTGAATGTTCTACTCTA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAHRILL*CECSTL
Trigger: TAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTG...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR GCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGCACTAAAAGGCATATaGATTTCATACTCCCAATTA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWALKGI*ISYSQL
Trigger: TAATTGGGAGTATGAAATGCATATGCCTTTTAGTGC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAACGGCATTCTGTGGGTaGATTTTATGTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKTAFCG*ILCQHS
Trigger: AGAATGTTGACATAAAATGCACCCACAGAATGCCGT...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATACGGCATTCTGTGGGTaGATTTTATGTCAACATTCT +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYTAFCG*ILCQHS
Trigger: AGAATGTTGACATAAAATGCACCCACAGAATGCCGT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTATGACTCCTGTAACATaGTCATTTTCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTMTPVT*SFSAAV
Trigger: TACAGCAGCAGAAAATGACCATGTTACAGGAGTCAT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTTTGAAGATGACATCTaGTTTCATAACTTCATACCC +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWFEDDI*FHNFIP
Trigger: GGGTATGAAGTTATGAAACCAGATGTCATCTTCAAA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTAGACTTACACAATGTTaGCTTCAGTTACTGAATAGA +
Preference number: 4 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIRLTQC*LQLLNR
Trigger: TCTATTCAGTAACTGAAGCCAACATTGTGTAAGTCT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGTACTTAGCTAAGGGATaGTTCATGCATTTTTATGGA +
Preference number: 4 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWYLAKG*FMHFYG
Trigger: TCCATAAAAATGCATGAACCATCCCTTAGCTAAGTA...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTGATGCTTCCTGTATTTaGCCTCCTTTAGTATGCTAT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTDASCI*PPLVCY
Trigger: ATAGCATACTAAAGGAGGCCAAATACAGGAAGCATC...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACACAGGATTCTTCTTTaGTGTGAATGTTCTACTCTA +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKHRILL*CECSTL
Trigger: TAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATAGTCTCGTTACTTGTTaGACTGTCCCATATTTAGTA +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYSLVTC*TVPYLV
Trigger: TACTAAATATGGGACAGTGCAACAAGTAACGAGACT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAAGTTCTAGTGATTACTaGACAACGTATTTGAACCTC +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKSSSDY*TTYLNL
Trigger: GAGGTTCAAATACGTTGTGCAGTAATCACTAGAACT...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTGGCCTCCTTTAGTATaGTATCTCAATGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTWPPLV*YLNVPY
Trigger: ATAAGGTACATTGAGATAGCATACTAAAGGAGGCCA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR GCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATTGGCCTCCTTTAGTATaGTATCTCAATGTACCTTAT +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYWPPLV*YLNVPY
Trigger: ATAAGGTACATTGAGATAGCATACTAAAGGAGGCCA...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTTTGAAGATGACATCTaGTTTCATAACTTCATACCC +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAFEDDI*FHNFIP
Trigger: GGGTATGAAGTTATGAAACCAGATGTCATCTTCAAA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTACTATGGTTATTCTGTaGTTCCTGCCTTTGCATATT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTTMVIL*FLPLHI
Trigger: AATATGCAAAGGCAGGAACCACAGAATAACCATAGT...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTACTTAGCTAAGGGATaGTTCATGCATTTTTATGGA +
Preference number: 4 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAYLAKG*FMHFYG
Trigger: TCCATAAAAATGCATGAACCATCCCTTAGCTAAGTA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAATTCATTTGCATTAGTTaGTCTCCCACGTCTAGTAAA +
Preference number: 4 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKFICIS*SPTSSK
Trigger: TTTACTAGACGTGGGAGACCAACTAATGCAAATGAA...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTCAGAATATAGTAAAATaGAACAGTGGAAGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTQNIVK*NSGSLG
Trigger: ACCTAGGCTTCCACTGTTCCATTTTACTATATTCTG...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS-3UTR CCA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATAGACTTACACAATGTTaGCTTCAGTTACTGAATAGA +
Preference number: 4 (lower is better)
Translates to: VIIEISRNYKLFTEARKYRLTQC*LQLLNR
Trigger: TCTATTCAGTAACTGAAGCCAACATTGTGTAAGTCT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CCA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTCATCTGAAAGCTCATTaGTACCTGTATAGACTAATA +
Preference number: 4 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTHLKAH*YLYRLI
Trigger: TATTAGTCTATACAGGTACCAATGAGCTTTCAGATG...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS TCA 90 bp CGCCCGAGGCTAAACGCGCCCGAGGCTGGCGCCTCCACGCCCGCCTaGAAGGACGCCCAGGAGCGGCGCCTCCGGAAAGGCCGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: RPRLNAPEAGASTPA*KDAQERRLRKGRAR
Trigger: GCGGGCACGGCCTTTCCGGAGGCGCCGCTCCTGGGCGTCCTTTCAGGCGGGCGTGGAGGCGCCAGCCTCGGGCGCGTTTAGCCTCGGGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS GCA 90 bp GCCCGCCTGAAAGGACGCCCAGGAGCGGCGCCTCCGGAAAGGCCGTaGCCGCCCCACAGCCCAGAATCCGCGCAGCTCCGCGGCCCACGG +
Preference number: 5 (lower is better)
Translates to: ARLKGRPGAAPPERP*PPHSPESAQLRGPR
Trigger: CCGTGGGCCGCGGAGCTGCGCGGATTCTGGGCTGTGGGGCGGGCACGGCCTTTCCGGAGGCGCCGCTCCTGGGCGTCCTTTCAGGCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS GCA 90 bp CCCGTCCCCCGTGTCCCGCGCACGCGCCCAAACCGTCGGCCTTTGTaGGCTCCCGGGCGGCTCCGAACGGGCCGGGACGAGTCGGGGACT +
Preference number: 5 (lower is better)
Translates to: PVPRVPRTRPNRRPL*APGRLRTGRDESGT
Trigger: AGTCCCCGACTCGTCCCGGCCCGTTCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGGGCGCGTGCGCGGGACACGGGGGACGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392319.6
ENST00000438628.6
ENST00000543758.5
CDS CCA 90 bp CCGAGGTCGAGGCTAAACGCGCCCGAGGCTAAACGCGCCCGAGGCTaGCGCCTCCACGCCCGCCTGAAAGGACGCCCAGGAGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: PRSRLNAPEAKRARG*RLHARLKGRPGAAP
Trigger: AGGCGCCGCTCCTGGGCGTCCTTTCAGGCGGGCGTGGAGGCGCCAGCCTCGGGCGCGTTTAGCCTCGGGCGCGTTTAGCCTCGACCTCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR CAA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCCAAACCGTCGGCCTTaGTGCGCTCCCGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWPNRRP*CAPGRL
Trigger: GAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392319.6
ENST00000543758.5
CDS-3UTR CAA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATCGGACGCCCAGGGCCTaGAAGCCGAAGCTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: VIIEISRNYKLFTEARKYRTPRA*KPKLPA
Trigger: CGCGGGGAGCTTCGGCTTCAAGGCCCTGGGCGTCCG...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS-3UTR CAA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATCCAAACCGTCGGCCTTaGTGCGCTCCCGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: VIIEISRNYKLFTEARKYPNRRP*CAPGRL
Trigger: GAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGG...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392319.6
CDS CCA 90 bp AGATCGGTTCTACTGTGCGTCTCTTCTGCTTCTGCCCCAAAACTGTaGAGTGAGGTCTCAGCTAGGTCTTCTACACTGAGAATGAATTCC +
Preference number: 5 (lower is better)
Translates to: RSVLLCVSSASAPKL*SEVSARSSTLRMNS
Trigger: GGAATTCATTCTCAGTGTAGAAGACCTAGCTGAGACCTCACTCCACAGTTTTGGGGCAGAAGCAGAAGAGACGCACAGTAGAACCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000438628.6
ENST00000441040.2
ENST00000535439.2
ENST00000536123.5
ENST00000539098.5
ENST00000539354.6
ENST00000539686.5
ENST00000540031.5
ENST00000542358.1
ENST00000542874.5
ENST00000543310.5
ENST00000543758.5
ENST00000545299.1
CDS CCA 90 bp TACCCTGTTAAGGGAAAAATCACAAAGGCCTTGGGCCCAACTGCTTaGGGTTTAGGGCCTCTAAAGTTGAGCAAGGTTTCACATCAAAGT +
Preference number: 5 (lower is better)
Translates to: YPVKGKITKALGPTA*GLGPLKLSKVSHQS
Trigger: ACTTTGATGTGAAACCTTGCTCAACTTTAGAGGCCCTAAACCCCAAGCAGTTGGGCCCAAGGCCTTTGTGATTTTTCCCTTAACAGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS CCA 90 bp TATATAACTGAAACAGCACTCTCAGGGAAACAGAATATAGTAAAATaGAACAGTGGAAGCCTAGGTCTAAAAGACGCCGCCGCCGAGTCG +
Preference number: 5 (lower is better)
Translates to: YITETALSGKQNIVK*NSGSLGLKDAAAES
Trigger: CGACTCGGCGGCGGCGTCTTTTAGACCTAGGCTTCCACTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGTGCTGTTTCAGTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS CCA 90 bp CCCAACAGAGTAAGTAATTCTCAAAGTTACAGTAACGGTCTCCCTTaGTGGCTAATAGGGTCTAGTACAAAGCCACTGAACACTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PNRVSNSQSYSNGLP*WLIGSSTKPLNTSE
Trigger: CTCTGAAGTGTTCAGTGGCTTTGTACTAGACCCTATTAGCCACCAAGGGAGACCGTTACTGTAACTTTGAGAATTACTTACTCTGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS TCA 90 bp CATCTACTTTCCAGACTTCATGAATGGGAGATAGGAAGAAATAACTaGACAGGCAGCAGTAGTGTCATACTATGGAGGTCCCTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: HLLSRLHEWEIGRNN*TGSSSVILWRSLEN
Trigger: ATTCTCCAGGGACCTCCATAGTATGACACTACTGCTGCCTGTTCAGTTATTTCTTCCTATCTCCCATTCATGAAGTCTGGAAAGTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542874.5
CDS CCA 90 bp AACAGAGTAAGTAATTCTCAAAGTTACAGTAACGGTCTCCCTTGGTaGCTAATAGGGTCTAGTACAAAGCCACTGAACACTTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: NRVSNSQSYSNGLPW*LIGSSTKPLNTSEA
Trigger: AGCCTCTGAAGTGTTCAGTGGCTTTGTACTAGACCCTATTAGCCACCAAGGGAGACCGTTACTGTAACTTTGAGAATTACTTACTCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS-3UTR CAA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACTTCTGGGGAAAGGTTTaGCCACAATTACCACAGCCA +
Preference number: 5 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHFWGKV*PQLPQP
Trigger: TGGCTGTGGTAATTGTGGCAAAACCTTTCCCCAGAA...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTACAGTGGTGTGTAGTGTaGTCTTCACAGACATCAGAG +
Preference number: 5 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLQWCVV*SSQTSE
Trigger: CTCTGATGTCTGTGAAGACAACACTACACACCACTG...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS CCA 90 bp TATATAACTGAAACAGCACTCTCAGGGAAACAGAATATAGTAAAATaGAACAGTGGAAGCCTAGGTCTTGAACTCACAAAAGACGCCGCC +
Preference number: 5 (lower is better)
Translates to: YITETALSGKQNIVK*NSGSLGLELTKDAA
Trigger: GGCGGCGTCTTTTGTGAGTTCAAGACCTAGGCTTCCACTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGTGCTGTTTCAGTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536123.5
CDS-3UTR CAA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGGATGAGTTGCAAGACTaGACTTCTCACCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWDELQD*TSHQRP
Trigger: AGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCATC...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTGATGAGTTGCAAGACTaGACTTCTCACCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIDELQD*TSHQRP
Trigger: AGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCATC...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAACTTCTGGAAGGCTTTaGGACATTCACAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLTSGRL*DIHRIL
Trigger: AAGAATCCTGTGAATGTCCAAAAGCCTTCCAGAAGT...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGCAGTGGTGTGTAGTGTaGTCTTCACAGACATCAGAG +
Preference number: 5 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWQWCVV*SSQTSE
Trigger: CTCTGATGTCTGTGAAGACAACACTACACACCACTG...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTATCAAGGAACTACAAGTaGTTCACAGAGGCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLSRNYK*FTEARK
Trigger: TTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGA...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS TCA 90 bp GGAATTCACGATCATCTAAGGCCAGAGGTACGCTTGCTATATAACTaGAACAGCACTCTCAGGGAAACAGAATATAGTAAAATGGAACAG +
Preference number: 5 (lower is better)
Translates to: GIHDHLRPEVRLLYN*NSTLRETEYSKMEQ
Trigger: CTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGTGCTGTTTCAGTTATATAGCAAGCGTACCTCTGGCCTTAGATGATCGTGAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536123.5
ENST00000542358.1
ENST00000543758.5
ENST00000545299.1
CDS-3UTR CAA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAAATAGCTTAAGAGACTaGACTTCTGGAAGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLNSLRD*TSGRLL
Trigger: CAAAAGCCTTCCAGAAGTCAAGTCTCTTAAGCTATT...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGTCAACCACTTAGAATaGGGTATTTTTGGTACCCAT +
Preference number: 5 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRVNHLE*GIFGTH
Trigger: ATGGGTACCAAAAATACCCAATTCTAAGTGGTTGAC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAAGATGAGTTGCAAGACTaGACTTCTCACCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKDELQD*TSHQRP
Trigger: AGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCATC...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTGATGAGTTGCAAGACTaGACTTCTCACCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTDELQD*TSHQRP
Trigger: AGGCCTTTGGTGAGAAGTCAAGTCTTGCAACTCATC...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGACTTCTGGAAGGCTTTaGGACATTCACAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWTSGRL*DIHRIL
Trigger: AAGAATCCTGTGAATGTCCAAAAGCCTTCCAGAAGT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAATAGCTTAAGAGACTaGACTTCTGGAAGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLNSLRD*TSGRLL
Trigger: CAAAAGCCTTCCAGAAGTCAAGTCTCTTAAGCTATT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACGTCAACCACTTAGAATaGGGTATTTTTGGTACCCAT +
Preference number: 5 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHVNHLE*GIFGTH
Trigger: ATGGGTACCAAAAATACCCAATTCTAAGTGGTTGAC...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACAGTGGTGTGTAGTGTaGTCTTCACAGACATCAGAG +
Preference number: 5 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKQWCVV*SSQTSE
Trigger: CTCTGATGTCTGTGAAGACAACACTACACACCACTG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTCTTACAATGGGTTTATaGGGAGGTAACCCCACTGTA +
Preference number: 5 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKALTMGL*GGNPTV
Trigger: TACAGTGGGGTTACCTCCCAATAAACCCATTGTAAG...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp CTCATCCCCAGTGGGAATATTTCTAATAGCTTAAGAGACTTGACTTCTGGAAGGGAAAGACAGAATTATTaGGCTGTTGAACTGGTATTC +
Preference number: 5 (lower is better)
Translates to: LIPSGNISNSLRDLTSGRERQNY*AVELVF
Trigger: GAATACCAGTTCAACAGCCAAATAATTCTGTCTTTC...CCTTCCAGAAGTCAAGTCTCTTAAGCTATTAGAAATATTCCCACTGGGGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp GGACTGAAAAATGATAGCAAGGTGCAGAAAACATGCATGCATCTGCAAGGGTTAGAAAGACAGAATTATTaGGCTGTTGAACTGGTATTC +
Preference number: 5 (lower is better)
Translates to: GLKNDSKVQKTCMHLQGLERQNY*AVELVF
Trigger: GAATACCAGTTCAACAGCCAAATAATTCTGTCTTTC...TAACCCTTGCAGATGCATGCATGTTTTCTGCACCTTGCTATCATTTTTCAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTTCCATACACCACCTCATTTAGAGTTCTCATCCTCATGGAGTACAAACACCTAAGTCACCTTCACTGTTaGATTTCCTTAAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: FPYTTSFRVLILMEYKHLSHLHC*ISLKEQ
Trigger: TTGTTCCTTTAAGGAAATCAAACAGTGAAGGTGACT...TAGGTGTTTGTACTCCATGAGGATGAGAACTCTAAATGAGGTGGTGTATGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTACTTCTGGAAGGCTTTaGGACATTCACAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKATSGRL*DIHRIL
Trigger: AAGAATCCTGTGAATGTCCAAAAGCCTTCCAGAAGT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTAATAGCTTAAGAGACTaGACTTCTGGAAGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLINSLRD*TSGRLL
Trigger: CAAAAGCCTTCCAGAAGTCAAGTCTCTTAAGCTATT...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATCTTACAATGGGTTTATaGGGAGGTAACCCCACTGTA +
Preference number: 5 (lower is better)
Translates to: VIIEISRNYKLFTEARKYLTMGL*GGNPTV
Trigger: TACAGTGGGGTTACCTCCCAATAAACCCATTGTAAG...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAACTTACAATGGGTTTATaGGGAGGTAACCCCACTGTA +
Preference number: 5 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKLTMGL*GGNPTV
Trigger: TACAGTGGGGTTACCTCCCAATAAACCCATTGTAAG...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp ATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACCACCTCATTTACTGCACAACGTATTaGAACCTCTGCATCAGTTTT +
Preference number: 5 (lower is better)
Translates to: IGSLYSMNYDRLSIHHLIYCTTY*NLCISF
Trigger: AAAACTGATGCAGAGGTTCAAATACGTTGTGCAGTA...AATGAGGTGGTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp ACTGCAGTCATAGGTTCACTCTACTCTATGAATTATGATCGGCTTTCCATACACGACTCTTTCTTGATTTaGCTTTCATCATGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TAVIGSLYSMNYDRLSIHDSFLI*LSSWLH
Trigger: ATGAAGCCATGATGAAAGCAAAATCAAGAAAGAGTC...GTGTATGGAAAGCCGATCATAATTCATAGAGTAGAGTGAACCTATGACTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTGTCTATGGAGTCACCTTCACTGTTaGATTTCCTTAAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: FTGFFFAVNVLLYKACLWSHLHC*ISLKEQ
Trigger: TTGTTCCTTTAAGGAAATCAAACAGTGAAGGTGACT...CCATAGACAAGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp GTGATAATAGAAATCTCAAGGAACTACAAGTTGTTCACAGAGGCCAGAAAATATACTTCTGGAAGGCTTTaGGACATTCACAGGATTCTT +
Preference number: 5 (lower is better)
Translates to: VIIEISRNYKLFTEARKYTSGRL*DIHRIL
Trigger: AAGAATCCTGTGAATGTCCAAAAGCCTTCCAGAAGT...ATATTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGAGATTTCTATTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTTACTGCACAACGTATTaGAACCTCTGCATCAGTTTT +
Preference number: 5 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKAYCTTY*NLCISF
Trigger: AAAACTGATGCAGAGGTTCAAATACGTTGTGCAGTA...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTTCAAGGAACTACAAGTaGTTCACAGAGGCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTSRNYK*FTEARK
Trigger: TTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGA...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAATCAAGGAACTACAAGTaGTTCACAGAGGCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKSRNYK*FTEARK
Trigger: TTTTCTGGCCTCTGTGAACAACTTGTAGTTCCTTGA...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS CCA 90 bp TATATAACTGAAACAGCACTCTCAGGGAAACAGAATATAGTAAAATaGAACAGTGGAAGCCTAGGTCTCTGCAAACAGATAAGGAAATAT +
Preference number: 5 (lower is better)
Translates to: YITETALSGKQNIVK*NSGSLGLCKQIRKY
Trigger: ATATTTCCTTATCTGTTTGCAGAGACCTAGGCTTCCACTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGTGCTGTTTCAGTTATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542358.1
CDS-3UTR CAA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTAGTCACCTTCACTGTTaGATTTCCTTAAAGGAACAA +
Preference number: 5 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKASHLHC*ISLKEQ
Trigger: TTGTTCCTTTAAGGAAATCAAACAGTGAAGGTGACT...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
ENST00000543758.5
CDS-3UTR CAA 90 bp TATTTGGCCTCCTTTAGTATGCTATCTCAATGTACCTTATTGTGCTCCATAAAATACTGCACAACGTATTaGAACCTCTGCATCAGTTTT +
Preference number: 5 (lower is better)
Translates to: YLASFSMLSQCTLLCSIKYCTTY*NLCISF
Trigger: AAAACTGATGCAGAGGTTCAAATACGTTGTGCAGTA...TTTTATGGAGCACAATAAGGTACATTGAGATAGCATACTAAAGGAGGCCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp TTTTGGACATTCACAGGATTCTTCTTTGCTGTGAATGTTCTACTCTATAAGGCTGACTCTTTCTTGATTTaGCTTTCATCATGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: FWTFTGFFFAVNVLLYKADSFLI*LSSWLH
Trigger: ATGAAGCCATGATGAAAGCAAAATCAAGAAAGAGTC...AGCCTTATAGAGTAGAACATTCACAGCAAAGAAGAATCCTGTGAATGTCCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS-3UTR CAA 90 bp AACGTTATCATAATTGCATTTCCTGAAGTCCAAGATGATCTGTCAAAGACTACTGACTCTTTCTTGATTTaGCTTTCATCATGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: NVIIIAFPEVQDDLSKTTDSFLI*LSSWLH
Trigger: ATGAAGCCATGATGAAAGCAAAATCAAGAAAGAGTC...AGTAGTCTTTGACAGATCATCTTGGACTTCAGGAAATGCAATTATGATAACGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000539354.6
CDS CAA 90 bp CCGCCCGTCCCCCGTGTCCCGCGCACGCGCCCAAACCGTCGGCCTTaGTGCGCTCCCGGGCGGCTCCGAACGGGCCGGGACGAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PPVPRVPRTRPNRRP*CAPGRLRTGRDESG
Trigger: CCCCGACTCGTCCCGGCCCGTTCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGGGCGCGTGCGCGGGACACGGGGGACGGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392319.6
ENST00000438628.6
ENST00000543758.5
CDS TCA 72 bp CCCAGACCCGCATCCGCGCGCGGACGCCCAGGGCCTTaGAGCCGAAGCTCCCCGCGGCCACTCCCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: PRPASARGRPGP*SRSSPRPLPRA
Trigger: GGCGCGCGGGAGTGGCCGCGGGGAGCTTCGGCTTCAAGGCCCTGGGCGTCCGCGCGCGGATGCGGGTCTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS CAA 72 bp CCCCGTGTCCCGCGCACGCGCCCAAACCGTCGGCCTTaGTGCGCTCCCGGGCGGCTCCGAACGGGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: PRVPRTRPNRRP*CAPGRLRTGRD
Trigger: GTCCCGGCCCGTTCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGGGCGCGTGCGCGGGACACGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392319.6
ENST00000438628.6
ENST00000543758.5
CDS GCA 72 bp CGTGTCCCGCGCACGCGCCCAAACCGTCGGCCTTTGTaGGCTCCCGGGCGGCTCCGAACGGGCCGGGACGAG +
Preference number: 6 (lower is better)
Translates to: RVPRTRPNRRPL*APGRLRTGRDE
Trigger: CTCGTCCCGGCCCGTTCGGAGCCGCCCGGGAGCGCACAAAGGCCGACGGTTTGGGCGCGTGCGCGGGACACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392319.6
ENST00000438628.6
ENST00000543758.5
CDS TCA 72 bp CTAAACGCGCCCGAGGCTGGCGCCTCCACGCCCGCCTaGAAGGACGCCCAGGAGCGGCGCCTCCGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: LNAPEAGASTPA*KDAQERRLRKG
Trigger: GCCTTTCCGGAGGCGCCGCTCCTGGGCGTCCTTTCAGGCGGGCGTGGAGGCGCCAGCCTCGGGCGCGTTTAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS CCA 72 bp AGGCTAAACGCGCCCGAGGCTAAACGCGCCCGAGGCTaGCGCCTCCACGCCCGCCTGAAAGGACGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: RLNAPEAKRARG*RLHARLKGRPG
Trigger: TCCTGGGCGTCCTTTCAGGCGGGCGTGGAGGCGCCAGCCTCGGGCGCGTTTAGCCTCGGGCGCGTTTAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327668.11
CDS CCA 72 bp CACATGAGCAGGCTTATTTGTAGGGACCAGGATCTGTaGAAAAAGACGCCGCCGCCGAGTCGCGCCCGCGCG +
Preference number: 6 (lower is better)
Translates to: HMSRLICRDQDL*KKTPPPSRARA
Trigger: CGCGCGGGCGCGACTCGGCGGCGGCGTCTTTTTCCACAGATCCTGGTCCCTACAAATAAGCCTGCTCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539098.5
ENST00000539354.6
CDS CCA 72 bp CACATGAGCAGGCTTATTTGTAGGGACCAGGATCTGTaGATGAACTCACAAAAGACGCCGCCGCCGAGTCGC +
Preference number: 6 (lower is better)
Translates to: HMSRLICRDQDL*MNSQKTPPPSR
Trigger: GCGACTCGGCGGCGGCGTCTTTTGTGAGTTCATCCACAGATCCTGGTCCCTACAAATAAGCCTGCTCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438628.6
CDS CAA 90 bp ACAAAGGCCTTGGGCCCAACTGCTTGGGGTTTAGGGCCTCTAAAGTaGAGCAAGGTTTCACATCAAAGTTGGCCTGGTGAAGCTGTACCC +
Preference number: 6 (lower is better)
Translates to: TKALGPTAWGLGPLK*SKVSHQSWPGEAVP
Trigger: GGGTACAGCTTCACCAGGCCAACTTTGATGTGAAACCTTGCTCAACTTTAGAGGCCCTAAACCCCAAGCAGTTGGGCCCAAGGCCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS TCA 72 bp TCCATGTGGCAGAAAACAGCCACTCACTGGAGAATCTaGACTTGGAATTTCTCCATCTCCTACCCACGGCTC +
Preference number: 6 (lower is better)
Translates to: SMWQKTATHWRI*TWNFSISYPRL
Trigger: GAGCCGTGGGTAGGAGATGGAGAAATTCCAAGTTCAGATTCTCCAGTGAGTGGCTGTTTTCTGCCACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535439.2
CDS TCA 72 bp TCATTTTCTGCTGCTGTACGAGATGATCAGCAAGGCTaGGATCGGTTCTACTGTGCGTCTCTTCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SFSAAVRDDQQG*DRFYCASLLLL
Trigger: CAGAAGCAGAAGAGACGCACAGTAGAACCGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000327668.11
ENST00000392319.6
ENST00000438628.6
ENST00000441040.2
ENST00000535439.2
ENST00000536123.5
ENST00000539098.5
ENST00000539354.6
ENST00000539686.5
ENST00000540031.5
ENST00000542358.1
ENST00000542874.5
ENST00000543310.5
ENST00000543758.5
ENST00000545299.1
CDS CCA 72 bp ACTCTCAGGGAAACAGAATATAGTAAAATGGAACAGTaGAAGCCTAGGTCTAAAAGACGCCGCCGCCGAGTC +
Preference number: 6 (lower is better)
Translates to: TLRETEYSKMEQ*KPRSKRRRRRV
Trigger: GACTCGGCGGCGGCGTCTTTTAGACCTAGGCTTCCACTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543758.5
CDS CCA 72 bp AAGGGAAAAATCACAAAGGCCTTGGGCCCAACTGCTTaGGGTTTAGGGCCTCTAAAGTTGAGCAAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: KGKITKALGPTA*GLGPLKLSKVS
Trigger: TGAAACCTTGCTCAACTTTAGAGGCCCTAAACCCCAAGCAGTTGGGCCCAAGGCCTTTGTGATTTTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS TCA 72 bp ATCTGTAACATGGTCATTTTCTGCTGCTGTACGAGATaGTCAGCAAGGCTGAGATCGGTTCTACTGTGCGTC +
Preference number: 6 (lower is better)
Translates to: ICNMVIFCCCTR*SARLRSVLLCV
Trigger: GACGCACAGTAGAACCGATCTCAGCCTTGCTGATCATCTCGTACAGCAGCAGAAAATGACCATGTTACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441040.2
CDS CAA 72 bp TTAAAGAGAGCCTCTCCAGAAGAAAATGATGTTTGTTaGGGAACAGAGTACTGCCATGAGAAGACAGGTGCC +
Preference number: 6 (lower is better)
Translates to: LKRASPEENDVC*GTEYCHEKTGA
Trigger: GGCACCTGTCTTCTCATGGCAGTACTCTGTTCCCAAACAAACATCATTTTCTTCTGGAGAGGCTCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS CCA 72 bp TTGCACATGAAATCTCTTTCTCTCTTGCTAGGAACTTaGAATTCACGATCATCTAAGGCCAGAGGTACGCTT +
Preference number: 6 (lower is better)
Translates to: LHMKSLSLLLGT*NSRSSKARGTL
Trigger: AAGCGTACCTCTGGCCTTAGATGATCGTGAATTCCAAGTTCCTAGCAAGAGAGAAAGAGATTTCATGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536123.5
ENST00000542358.1
ENST00000543758.5
ENST00000545299.1
CDS CCA 72 bp AGTAATTCTCAAAGTTACAGTAACGGTCTCCCTTGGTaGCTAATAGGGTCTAGTACAAAGCCACTGAACACT +
Preference number: 6 (lower is better)
Translates to: SNSQSYSNGLPW*LIGSSTKPLNT
Trigger: AGTGTTCAGTGGCTTTGTACTAGACCCTATTAGCCACCAAGGGAGACCGTTACTGTAACTTTGAGAATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543124.1
CDS TCA 72 bp GATCATCTAAGGCCAGAGGTACGCTTGCTATATAACTaGAACAGCACTCTCAGGGAAACAGAATATAGTAAA +
Preference number: 6 (lower is better)
Translates to: DHLRPEVRLLYN*NSTLRETEYSK
Trigger: TTTACTATATTCTGTTTCCCTGAGAGTGCTGTTTCAGTTATATAGCAAGCGTACCTCTGGCCTTAGATGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536123.5
ENST00000542358.1
ENST00000543758.5
ENST00000545299.1
CDS CCA 72 bp ACTCTCAGGGAAACAGAATATAGTAAAATGGAACAGTaGAAGCCTAGGTCTCTGCAAACAGATAAGGAAATA +
Preference number: 6 (lower is better)
Translates to: TLRETEYSKMEQ*KPRSLQTDKEI
Trigger: TATTTCCTTATCTGTTTGCAGAGACCTAGGCTTCCACTGTTCCATTTTACTATATTCTGTTTCCCTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542358.1
CDS TCA 72 bp CTGTACTTGCCACATAGGATTGCTCTGATGACTAAATaGGTTGATATACGTAAAGCACTTGGTATAAGATGT +
Preference number: 6 (lower is better)
Translates to: LYLPHRIALMTK*VDIRKALGIRC
Trigger: ACATCTTATACCAAGTGCTTTACGTATATCAACTCATTTAGTCATCAGAGCAATCCTATGTGGCAAGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543124.1