RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF831 (Homo sapiens)

Ensembl gene IDs: ENSG00000124203

Ensembl transcript IDs: ENST00000371030.3, ENST00000371030.4, ENST00000610729.1, ENST00000637017.1

Found 766 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGAGCTaGGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGT +
Preference number: 1 (lower is better)
Translates to: CLAPFEDEQSTPKGS*GTLRLSWGSEVGWS
Trigger: ACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCCCAGCTCCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp GGACAGGTGCAGAAGACGAGGCTGGGAGTCAAGGCCCAGTCACTGTaGACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCATGTCTGCC +
Preference number: 1 (lower is better)
Translates to: GQVQKTRLGVKAQSL*TLTICRVCFLAMSA
Trigger: GGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGACTCCCAGCCTCGTCTTCTGCACCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp ACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCATGTCTaGCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: TVHVDHLQSLLPCHV*PAWHHLKMSRALPR
Trigger: CCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp GCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAAATGTGTTaGTGGTGGCTTTCTTGGTTAGTGCCATTTGATTGCAGAGAGGCA +
Preference number: 1 (lower is better)
Translates to: ASCLDCVGSTCGEMC*WWLSWLVPFDCREA
Trigger: TGCCTCTCTGCAATCAAATGGCACTAACCAAGAAAGCCACCATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp TCCACCATCATCCTGAAGTTGGTGCTGTTTGGAGCTATGACTTACTaGTTTACAGCCAGTGACCCCGTTGATTCCACAGTAGCCACCCAG +
Preference number: 1 (lower is better)
Translates to: STIILKLVLFGAMTY*FTASDPVDSTVATQ
Trigger: CTGGGTGGCTACTGTGGAATCAACGGGGTCACTGGCTGTAAATCAGTAAGTCATAGCTCCAAACAGCACCAACTTCAGGATGATGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp AGCTTCTTCAGGCTCAGGTTCTTCACAGCAATAATTGGTGGAAGGTaGTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCA +
Preference number: 1 (lower is better)
Translates to: SFFRLRFFTAIIGGR*LCFSSSLSPPKLLA
Trigger: TGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCACCAATTATTGCTGTGAAGAACCTGAGCCTGAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp TCAAAAGCCAAAGTGCCTCCCTACATGAACTATGGGAAGAACAACTaGAGTGAGGAAAAATACACAAGCCCAGCTTGCTGCAGCAGTAGA +
Preference number: 1 (lower is better)
Translates to: SKAKVPPYMNYGKNN*SEEKYTSPACCSSR
Trigger: TCTACTGCTGCAGCAAGCTGGGCTTGTGTATTTTTCCTCACTTCAGTTGTTCTTCCCATAGTTCATGTAGGGAGGCACTTTGGCTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp TCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAAGTGTaGTCTCCACCTTGGAAGCAAATCCTCAGTTTACTAATGGAGAAA +
Preference number: 1 (lower is better)
Translates to: SHPRLFVKLLQLSQV*SPPWKQILSLLMEK
Trigger: TTTCTCCATTAGTAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 90 bp CTCTTTGTCAAGCTACTCCAATTATCCCAAGTGTGCTCTCCACCTTaGAAGCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTC +
Preference number: 1 (lower is better)
Translates to: LFVKLLQLSQVCSPP*KQILSLLMEKASCL
Trigger: GAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTGGAGTAGCTTGACAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 90 bp ATCCAAGGCTCAGACCATTTGCCTACACTGCCTCTCTCATTACAGTaGCATGAATCCTTCGAAAAGGGAGATAATCACCACATCGCTTTT +
Preference number: 1 (lower is better)
Translates to: IQGSDHLPTLPLSLQ*HESFEKGDNHHIAF
Trigger: AAAAGCGATGTGGTGATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAGGCAAATGGTCTGAGCCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 90 bp GAGAGAGCAGCTTCTCTATCAACCATTCTCAGAAAAATTGGAACCTaGAGATACATTCGTCTTGTCCAACTCTCTTATTCTCACTTAGGG +
Preference number: 1 (lower is better)
Translates to: ERAASLSTILRKIGT*RYIRLVQLSYSHLG
Trigger: CCCTAAGTGAGAATAAGAGAGTTGGACAAGACGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGGTTGATAGAGAAGCTGCTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp CCAATCATTTCCCTGATTGTGAACAACCAATTGAGTAGTAAATCCTaGACAGTTGACCGCATATACAAGACATTCCGTCATCCTCTAGTG +
Preference number: 1 (lower is better)
Translates to: PIISLIVNNQLSSKS*TVDRIYKTFRHPLV
Trigger: CACTAGAGGATGACGGAATGTCTTGTATATGCGGTCAACTGTTCAGGATTTACTACTCAATTGGTTGTTCACAATCAGGGAAATGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp CACATTCCGATAATGATGACAGTTTCCATAACTATAAAGATCTGCTaGACCAGGCAAATTCTGTGCAAAATGCAAATTTCTGTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: HIPIMMTVSITIKIC*TRQILCKMQISVLG
Trigger: CCCCAGCACAGAAATTTGCATTTTGCACAGAATTTGCCTGGTGCAGCAGATCTTTATAGTTATGGAAACTGTCATCATTATCGGAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp GATGCTCTGCATTGCTGCTGTGTCTCTGAAGTACAAGATGTCATATaGACATCATTACATCAAAGTTACACCAAAAGAGCTCAGCTACAA +
Preference number: 1 (lower is better)
Translates to: DALHCCCVSEVQDVI*TSLHQSYTKRAQLQ
Trigger: TTGTAGCTGAGCTCTTTTGGTGTAACTTTGATGTAATGATGTTCATATGACATCTTGTACTTCAGAGACACAGCAGCAATGCAGAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp TTTTCTTGGCTGGGCCTGAAATCCTTGGATATTTATGAGTGCATATaGAATGGTCACAAATATATGCTAAGTAACCAGGGAAGCTGGTCT +
Preference number: 1 (lower is better)
Translates to: FSWLGLKSLDIYECI*NGHKYMLSNQGSWS
Trigger: AGACCAGCTTCCCTGGTTACTTAGCATATATTTGTGACCATTTCATATGCACTCATAAATATCCAAGGATTTCAGGCCCAGCCAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp CAGCACATTCCGATAATGATGACAGTTTCCATAACTATAAAGATCTaGTGCACCAGGCAAATTCTGTGCAAAATGCAAATTTCTGTGCTG +
Preference number: 1 (lower is better)
Translates to: QHIPIMMTVSITIKI*CTRQILCKMQISVL
Trigger: CAGCACAGAAATTTGCATTTTGCACAGAATTTGCCTGGTGCAGCAGATCTTTATAGTTATGGAAACTGTCATCATTATCGGAATGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp CAACATCCTTTTTACCTCCCTTCTTATGTTTTTCTTGGCTGGGCCTaGAATCCTTGGATATTTATGAGTGCATATGAAATGGTCACAAAT +
Preference number: 1 (lower is better)
Translates to: QHPFYLPSYVFLGWA*NPWIFMSAYEMVTN
Trigger: ATTTGTGACCATTTCATATGCACTCATAAATATCCAAGGATTTCAGGCCCAGCCAAGAAAAACATAAGAAGGGAGGTAAAAAGGATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 90 bp TTAGTTCATGACAGCATCCCTCTAACTATTCTCTGTGGAAGAAACTaGGGCATCAGTTGGTTAAGACCCTTACCTAAAGATATAATAAAA +
Preference number: 1 (lower is better)
Translates to: LVHDSIPLTILCGRN*GISWLRPLPKDIIK
Trigger: TTTTATTATATCTTTAGGTAAGGGTCTTAACCAACTGATGCCTCAGTTTCTTCCACAGAGAATAGTTAGAGGGATGCTGTCATGAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 90 bp GTTCCTATACTTCTTCAGACCAAATTATGTATATTCCTACGTAAGTaGAAAGCATGGATGAAAAGAATCATACAGGGTAGAAATCCAGCA +
Preference number: 1 (lower is better)
Translates to: VPILLQTKLCIFLRK*KAWMKRIIQGRNPA
Trigger: TGCTGGATTTCTACCCTGTATGATTCTTTTCATCCATGCTTTGCACTTACGTAGGAATATACATAATTTGGTCTGAAGAAGTATAGGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 90 bp CTTCTTCAGACCAAATTATGTATATTCCTACGTAAGTGCAAAGCATaGATGAAAAGAATCATACAGGGTAGAAATCCAGCACATAAGATT +
Preference number: 1 (lower is better)
Translates to: LLQTKLCIFLRKCKA*MKRIIQGRNPAHKI
Trigger: AATCTTATGTGCTGGATTTCTACCCTGTATGATTCTTTTCATCCATGCTTTGCACTTACGTAGGAATATACATAATTTGGTCTGAAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGGGGAACGCTGCGGCTaGGTTGGGGGTCAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAGERCG*VGGQKL
Trigger: CAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCCC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCAAGGCCCAGTCACTGTaGACGTTGACCATTTGCAGA +
Preference number: 2 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPKAQSL*TLTICR
Trigger: TCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAACTCCCAAGGGGAGCTaGGGAACGCTGCGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPTPKGS*GTLRLS
Trigger: ACTCAGCCGCAGCGTTCCCCAGCTCCCCTTGGGAGT...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGACTCCCAAGGGGAGCTaGGGAACGCTGCGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMTPKGS*GTLRLS
Trigger: ACTCAGCCGCAGCGTTCCCCAGCTCCCCTTGGGAGT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGGGGAACGCTGCGGCTaGGTTGGGGGTCAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIGERCG*VGGQKL
Trigger: CAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCCC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTTGGGGGTCAGAAGTTaGTTGGAGTTGGCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPLGVRS*LELACK
Trigger: TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGACGCTGCGGCTGAGTTaGGGGTCAGAAGTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMTLRLS*GSEVGW
Trigger: CCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGATGCAGAAGACGAGGCTaGGAGTCAAGGCCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRCRRRG*ESRPSH
Trigger: GTGACTGGGCCTTGACTCCCAGCCTCGTCTTCTGCA...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTTGCTGCTGTGTCTCTaGAGTACAAGATGTCATATG +
Preference number: 2 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPLLLCL*STRCHM
Trigger: CATATGACATCTTGTACTTCAGAGACACAGCAGCAA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACTTCCTTGCCATGTCTaGCCTGCCTGGCACCATTTG +
Preference number: 2 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRLPCHV*PAWHHL
Trigger: CAAATGGTGCCAGGCAGGGCAGACATGGCAAGGAAG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCATTGCAGAGAGGCAGTaGGGGACAGGTGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVIAERQ*GTGAED
Trigger: GTCTTCTGCACCTGTCCCCCACTGCCTCTCTGCAAT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACGTCAACAGTCTTTTTaGCCAGACACCATGTTTCTC +
Preference number: 2 (lower is better)
Translates to: GNAAAELGVRSWLELACKRQQSF*PDTMFL
Trigger: GAGAAACATGGTGTCTGGTCAAAAAGACTGTTGACG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAATGGAGAAAGCCAGTTaGCTCGACTGTGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIMEKAS*LDCVGS
Trigger: GGACCCCACACAGTCGAGGCAACTGGCTTTCTCCAT...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCTGCAGAAGACGAGGCTaGGAGTCAAGGCCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGCRRRG*ESRPSH
Trigger: GTGACTGGGCCTTGACTCCCAGCCTCGTCTTCTGCA...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCATTGGTTAGTGCCATTTaGTTGCAGAGAGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPLVSAI*LQRGSG
Trigger: CCCACTGCCTCTCTGCAATCAAATGGCACTAACCAA...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTTGCCATGTCTGCCCTaGCTGGCACCATTTGAAGAT +
Preference number: 2 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVLPCLP*LAPFED
Trigger: ATCTTCAAATGGTGCCAGGCAGGGCAGACATGGCAA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCTTCCTTGCCATGTCTaGCCTGCCTGGCACCATTTG +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGLPCHV*PAWHHL
Trigger: CAAATGGTGCCAGGCAGGGCAGACATGGCAAGGAAG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCCCACCCAAACTTCTTaGATGCAAGGCCTCCGTGGC +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLPTQTS*MQGLRG
Trigger: GCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTACGCTGCGGCTGAGTTaGGGGTCAGAAGTTGGTTGG +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLTLRLS*GSEVGW
Trigger: CCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACACATGTCTGCCCTGCCTaGCACCATTTGAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTHVCPA*HHLKMS
Trigger: GCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATG...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGTTCTTCCGCCAGCCTaGCAACATTTACTTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPVLPPA*QHLLVK
Trigger: CTTCACAAGTAAATGTTGTCAGGCTGGCGGAAGAAC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAAGTCACTGTGCACGTTaGCCATTTGCAGAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPSHCAR*PFAEFA
Trigger: AGCAAACTCTGCAAATGGTCAACGTGCACAGTGACT...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATTGGTTAGTGCCATTTaGTTGCAGAGAGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTILVSAI*LQRGSG
Trigger: CCCACTGCCTCTCTGCAATCAAATGGCACTAACCAA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATTCTCTGTGCAGTTCTaGCGTGCACAATACAGAGGC +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTFSVQF*RAQYRG
Trigger: GCCTCTGTATTGTGCACGTCAGAACTGCACAGAGAA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATTGCCATGTCTGCCCTaGCTGGCACCATTTGAAGAT +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTLPCLP*LAPFED
Trigger: ATCTTCAAATGGTGCCAGGCAGGGCAGACATGGCAA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGACCATTTGCAGAGTTTaGTTCCTTGCCATGTCTGCC +
Preference number: 2 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMTICRV*FLAMSA
Trigger: GGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCATTGCAGAGAGGCAGTaGGGGACAGGTGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIIAERQ*GTGAED
Trigger: GTCTTCTGCACCTGTCCCCCACTGCCTCTCTGCAAT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp TCCACCTTGGAAGCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTaGCCTCGACTGTGTGGGGTCCACTTGTGGAGAAATGTGTTGATG +
Preference number: 2 (lower is better)
Translates to: STLEANPQFTNGESQ*PRLCGVHLWRNVLM
Trigger: CATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGCTTCCAAGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp CCAGCTAAAGTCAGGACTTCAATCTCCATCCAAGGCTCAGACCATTaGCCTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAA +
Preference number: 2 (lower is better)
Translates to: PAKVRTSISIQGSDH*PTLPLSLQWHESFE
Trigger: TTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAGGCAAATGGTCTGAGCCTTGGATGGAGATTGAAGTCCTGACTTTAGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp TTCTTCAGGCTCAGGTTCTTCACAGCAATAATTGGTGGAAGGTGCTaGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGC +
Preference number: 2 (lower is better)
Translates to: FFRLRFFTAIIGGRC*CFSSSLSPPKLLAC
Trigger: GCATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCACCAATTATTGCTGTGAAGAACCTGAGCCTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATGCACGTTGACCATTTaGAGAGTTTGCTTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQCTLTI*RVCFLA
Trigger: GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAAGGCCCAGTCACTGTaGACGTTGACCATTTGCAGA +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGKAQSL*TLTICR
Trigger: TCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTAGATCTGTTTTCTTCTaGACAGGGGCGCACCGGCTT +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASRSVFF*TGAHRL
Trigger: AAGCCGGTGCGCCCCTGTGCAGAAGAAAACAGATCT...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCATGTCTGCCCTGCCTaGCACCATTTGAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASHVCPA*HHLKMS
Trigger: GCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATGTGGGGTCCACTTGTaGAGAAATGTGTTGATGGTG +
Preference number: 2 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQCGVHL*RNVLMV
Trigger: CACCATCAACACATTTCTCCACAAGTGGACCCCACA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCAGGCCTCCGTGGCAATaGTTCCCCATGGGGAATATC +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFRPPWQ*FPMGNI
Trigger: GATATTCCCCATGGGGAACCATTGCCACGGAGGCCT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTaGTGGAGAAATGTGTTGATGGTGGCTTTCTTGGTTAGTGCCATT +
Preference number: 2 (lower is better)
Translates to: FTNGESQLPRLCGVH*WRNVLMVAFLVSAI
Trigger: AATGGCACTAACCAAGAAAGCCACCATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACGTCAACAGTCTTTTTaGCCAGACACCATGTTTCTC +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIRQQSF*PDTMFL
Trigger: GAGAAACATGGTGTCTGGTCAAAAAGACTGTTGACG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAACTCCACCAAGGACGTaGATTACTCTGAACAAGCTT +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTITPPRT*ITLNKL
Trigger: AAGCTTGTTCAGAGTAATTCACGTCCTTGGTGGAGT...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAATTATCCCAAGTGTaGTCTCCACCTTGGAAGCAA +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIQLSQV*SPPWKQ
Trigger: TTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAAGGCACAAGAGCATGTaGTTGCATCATCTGACCATA +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTRHKSM*LHHLTI
Trigger: TATGGTCAGATGATGCAAGCACATGCTCTTGTGCCT...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATGTGCAGTTCTGACGTaGACAATACAGAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTCAVLT*TIQRLI
Trigger: AATCAGCCTCTGTATTGTGCACGTCAGAACTGCACA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCTGTGGGGTCCACTTGTaGAGAAATGTGTTGATGGTG +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGCGVHL*RNVLMV
Trigger: CACCATCAACACATTTCTCCACAAGTGGACCCCACA...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGTGTGCTCTCCACCTTaGAAGCAAATCCTCAGTTTA +
Preference number: 2 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIVCSPP*KQILSL
Trigger: TAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACAC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCAGTCACTGTGCACGTTaGCCATTTGCAGAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISHCAR*PFAEFA
Trigger: AGCAAACTCTGCAAATGGTCAACGTGCACAGTGACT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGTCACAGGCACAGACTaGCTGAAGTGTATTCACATG +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASVTGTD*LKCIHM
Trigger: CATGTGAATACACTTCAGTCAGTCTGTGCCTGTGAC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTTGCACGTTGACCATTTaGAGAGTTTGCTTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASCTLTI*RVCFLA
Trigger: GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCA...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAGTAACCAGGGAAGCTaGTCTGGCATTGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGSNQGS*SGIEVF
Trigger: GAAAACTTCAATGCCAGACCAGCTTCCCTGGTTACT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp TCTCTTTGTCAAGCTACTCCAATTATCCCAAGTGTGCTCTCCACCTaGGAAGCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SLCQATPIIPSVLST*EANPQFTNGESQLP
Trigger: AGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTGGAGTAGCTTGACAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGACAACATTTACTTGTaGAGCGTCAACAGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVDNIYL*SVNSLF
Trigger: AAAAAGACTGTTGACGCTTCACAAGTAAATGTTGTC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCAGGCACAGACTGACTaGAGTGTATTCACATGTGTG +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFQAQTD*SVFTCV
Trigger: CACACATGTGAATACACTTCAGTCAGTCTGTGCCTG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGGGGAATTTTCTCTGTaGAGTTCTGACGTGCACAAT +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASGEFSL*SSDVHN
Trigger: ATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCTAGGTTACCCACCATaGTATTGGCAGTGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLLGYPP*YWQCFH
Trigger: ATGGAAACACTGCCAATAGCATGGTGGGTAACCTAG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCATTCTCAGAAAAATTaGAACCTGGAGATACATTCG +
Preference number: 2 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMHSQKN*NLEIHS
Trigger: CGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATTTCTCCATTCCTACTaGAGAGTTCTGGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTFLHSY*RVLVLL
Trigger: AAGCAAAACCAGAACTCTCCAGTAGGAATGGAGAAA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGACAACATTTACTTGTaGAGCGTCAACAGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQDNIYL*SVNSLF
Trigger: AAAAAGACTGTTGACGCTTCACAAGTAAATGTTGTC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR TCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTTTCTTGGCTGGGCCTaGAATCCTTGGATATTTATG +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLFLGWA*NPWIFM
Trigger: CATAAATATCCAAGGATTTCAGGCCCAGCCAAGAAA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTGTGCAGTTCTGACGTaGACAATACAGAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFCAVLT*TIQRLI
Trigger: AATCAGCCTCTGTATTGTGCACGTCAGAACTGCACA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTAAGCCATTGAGTCCATaGATTTTAAGGAGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLKPLSP*ILRREQ
Trigger: CTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCATAATTGGTGGAAGGTaGTTGTGTTTCAGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGIIGGR*LCFSSS
Trigger: TGAGGAACTGAAACACAAGCACCTTCCACCAATTAT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGAAGTTGGTTGGAGTTaGCTTGTAAATAACTCAAAA +
Preference number: 2 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPEVGWS*LVNNSK
Trigger: TTTTGAGTTATTTACAAGCCAACTCCAACCAACTTC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGGGTCAGAAGTTGGTTaGAGTTGGCTTGTAAATAAC +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASGSEVG*SWLVNN
Trigger: GTTATTTACAAGCCAACTCCAACCAACTTCTGACCC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGTTGCCTCGACTGTGTaGGGTCCACTTGTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLVASTV*GPLVEK
Trigger: TTTCTCCACAAGTGGACCCCACACAGTCGAGGCAAC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCAGTAACCAGGGAAGCTaGTCTGGCATTGAAGTTTTC +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFSNQGS*SGIEVF
Trigger: GAAAACTTCAATGCCAGACCAGCTTCCCTGGTTACT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCACAGCAATAATTGGTaGAAGGTGCTTGTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLHSNNW*KVLVFQ
Trigger: CTGAAACACAAGCACCTTCCACCAATTATTGCTGTG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCATATTTGACCTAGGTTaGGATGTGACAGCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFIFDLG*DVTAGN
Trigger: GTTGCCAGCTGTCACATCCCAACCTAGGTCAAATAT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTTAGTGCCATTTGATTaGAGAGAGGCAGTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLLVPFD*REAVGD
Trigger: GTCCCCCACTGCCTCTCTGCAATCAAATGGCACTAA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCATTCTCAGAAAAATTaGAACCTGGAGATACATTCG +
Preference number: 2 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGHSQKN*NLEIHS
Trigger: CGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGAAGTTGGTGCTGTTTaGAGCTATGACTTACTGATT +
Preference number: 2 (lower is better)
Translates to: IVYLSCQELWSQCTSARFEVGAV*SYDLLI
Trigger: AATCAGTAAGTCATAGCTCCAAACAGCACCAACTTC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGAAGTTGGTTGGAGTTaGCTTGTAAATAACTCAAAA +
Preference number: 2 (lower is better)
Translates to: GEYLQAIESMHFKERAASEVGWS*LVNNSK
Trigger: TTTTGAGTTATTTACAAGCCAACTCCAACCAACTTC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 90 bp ATTTTAAGGAGAGAGCAGCTTCTCTATCAACCATTCTCAGAAAAATaGGAACCTGGAGATACATTCGTCTTGTCCAACTCTCTTATTCTC +
Preference number: 2 (lower is better)
Translates to: ILRREQLLYQPFSEK*EPGDTFVLSNSLIL
Trigger: GAGAATAAGAGAGTTGGACAAGACGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGGTTGATAGAGAAGCTGCTCTCTCCTTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGGGTCAGAAGTTGGTTaGAGTTGGCTTGTAAATAAC +
Preference number: 2 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLGSEVG*SWLVNN
Trigger: GTTATTTACAAGCCAACTCCAACCAACTTCTGACCC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCAATGGAGAAAGCCAGTaGCCTCGACTGTGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPNGESQ*PRLCGV
Trigger: GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp CCATTTGAAGATGAGCAGAGCACTCCCAAGGGGAGCTaGGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: PFEDEQSTPKGS*GTLRLSWGSEV
Trigger: AACTTCTGACCCCCAACTCAGCCGCAGCGTTCCCCAGCTCCCCTTGGGAGTGCTCTGCTCATCTTCAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp CGAGGCTGGGAGTCAAGGCCCAGTCACTGTGCACGTTaGCCATTTGCAGAGTTTGCTTCCTTGCCATGTCTG +
Preference number: 3 (lower is better)
Translates to: RGWESRPSHCAR*PFAEFASLPCL
Trigger: CAGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGACTCCCAGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp GCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTaGTTCCTTGCCATGTCTGCCCTGCCTGGCACCATT +
Preference number: 3 (lower is better)
Translates to: AQSLCTLTICRV*FLAMSALPGTI
Trigger: AATGGTGCCAGGCAGGGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp CAGAAGACGAGGCTGGGAGTCAAGGCCCAGTCACTGTaGACGTTGACCATTTGCAGAGTTTGCTTCCTTGCC +
Preference number: 3 (lower is better)
Translates to: QKTRLGVKAQSL*TLTICRVCFLA
Trigger: GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGACTCCCAGCCTCGTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp GTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTaGATGCAAGGCCTCCGTGGCAATGGTTCCCCATGG +
Preference number: 3 (lower is better)
Translates to: VFQFLTVPTQTS*MQGLRGNGSPW
Trigger: CCATGGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCTGCCTGGCACCATTaGAAGATGAGCAGAGCACTC +
Preference number: 3 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPAWHH*KMSRAL
Trigger: GAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGAATGGAGAAAGCCAGTaGCCTCGACTGTGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMNGESQ*PRLCGV
Trigger: GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAACGCTGCGGCTGAGTaGGGGGTCAGAAGTTGGTTG +
Preference number: 3 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRNAAAE*GVRSWL
Trigger: CAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCCCATTCTCAGAAAAATaGGAACCTGGAGATACATTC +
Preference number: 3 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPPFSEK*EPGDTF
Trigger: GAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGG...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp GTTGACCATTTGCAGAGTTTGCTTCCTTGCCATGTCTaGCCTGCCTGGCACCATTTGAAGATGAGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: VDHLQSLLPCHV*PAWHHLKMSRA
Trigger: TGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp CACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATaGTTCCCCATGGGGAATATCTTCAAGCCATTGAGT +
Preference number: 3 (lower is better)
Translates to: HPNFLHARPPWQ*FPMGNIFKPLS
Trigger: ACTCAATGGCTTGAAGATATTCCCCATGGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGCGTCAACAGTCTTTTaGACCAGACACCATGTTTCT +
Preference number: 3 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAASTVF*TRHHVS
Trigger: AGAAACATGGTGTCTGGTCAAAAAGACTGTTGACGC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCCTGCCTGGCACCATTaGAAGATGAGCAGAGCACTC +
Preference number: 3 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRPAWHH*KMSRAL
Trigger: GAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGCAGAGTTTGCTTCCTaGCCATGTCTGCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: GEYLQAIESMHFKERAASAEFAS*PCLPCL
Trigger: CAGGCAGGGCAGACATGGCAAGGAAGCAAACTCTGC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGGTGCACGTTGACCATTaGCAGAGTTTGCTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMVHVDH*QSLLPC
Trigger: GCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCAC...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCTGTGTGGGGTCCACTaGTGGAGAAATGTGTTGATG +
Preference number: 3 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMLCGVH*WRNVLM
Trigger: CATCAACACATTTCTCCACAAGTGGACCCCACACAG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp ATTCCGTCATCCTCTAGTGCTCCAAGTGGCAGAGGCTaGTGTTTTTCCCTGGTTCCTATTCTTCCAGTGGTG +
Preference number: 3 (lower is better)
Translates to: IPSSSSAPSGRG*CFSLVPILPVV
Trigger: CACCACTGGAAGAATAGGAACCAGGGAAAAACATCAGCCTCTGCCACTTGGAGCACTAGAGGATGACGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp GGCGCACCGGCTTGGAATACTGGGGAATTTTCTCTGTaGAGTTCTGACGTGCACAATACAGAGGCTGATTTA +
Preference number: 3 (lower is better)
Translates to: GAPAWNTGEFSL*SSDVHNTEADL
Trigger: TAAATCAGCCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp GGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTaGAGTTGGCTTGTAAATAACTCAAAATGGCTTTCC +
Preference number: 3 (lower is better)
Translates to: GTLRLSWGSEVG*SWLVNNSKWLS
Trigger: GGAAAGCCATTTTGAGTTATTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp GAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTaGAGAAATGTGTTGATGGTGGCTTTCTTGGTTAGT +
Preference number: 3 (lower is better)
Translates to: ESQLPRLCGVHL*RNVLMVAFLVS
Trigger: ACTAACCAAGAAAGCCACCATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp CTCGACTGTGTGGGGTCCACTTGTGGAGAAATGTGTTaGTGGTGGCTTTCTTGGTTAGTGCCATTTGATTGC +
Preference number: 3 (lower is better)
Translates to: LDCVGSTCGEMC*WWLSWLVPFDC
Trigger: GCAATCAAATGGCACTAACCAAGAAAGCCACCATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp AGGGAGTTAGAGACGAAATCAATATTCCGCCATATTTaGCCTAGGTTGGGATGTGACAGCTGGCAACGGTGG +
Preference number: 3 (lower is better)
Translates to: RELETKSIFRHI*PRLGCDSWQRW
Trigger: CCACCGTTGCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCTCTAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp TCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTaGAAGGTTCCTCTTCCGGTCTCAGCTTTAGAAGAG +
Preference number: 3 (lower is better)
Translates to: SFMPRTVVTVHF*KVPLPVSALEE
Trigger: CTCTTCTAAAGCTGAGACCGGAAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTaGGATGTGACAGCTGGCAACGGTGGCTCCTATAGG +
Preference number: 3 (lower is better)
Translates to: RRNQYSAIFDLG*DVTAGNGGSYR
Trigger: CCTATAGGAGCCACCGTTGCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGACCATTTGCAGAGTTaGCTTCCTTGCCATGTCTGC +
Preference number: 3 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRDHLQS*LPCHVC
Trigger: GCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGACCATTTGCAGAGTTaGCTTCCTTGCCATGTCTGC +
Preference number: 3 (lower is better)
Translates to: GEYLQAIESMHFKERAASDHLQS*LPCHVC
Trigger: GCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAGTGTGCTCTCCACCTaGGAAGCAAATCCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGSVLST*EANPQF
Trigger: AAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCACACCCCCGTCTCTTaGTCAAGCTACTCCAATTAT +
Preference number: 3 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGHTPVS*SSYSNY
Trigger: ATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp AAGCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTaGCTCGACTGTGTGGGGTCCACTTGTGGAGAAATG +
Preference number: 3 (lower is better)
Translates to: KQILSLLMEKAS*LDCVGSTCGEM
Trigger: CATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp CAATCTCCATCCAAGGCTCAGACCATTTGCCTACACTaGCTCTCTCATTACAGTGGCATGAATCCTTCGAAA +
Preference number: 3 (lower is better)
Translates to: QSPSKAQTICLH*LSHYSGMNPSK
Trigger: TTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAGGCAAATGGTCTGAGCCTTGGATGGAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp TCAGGACTTCAATCTCCATCCAAGGCTCAGACCATTTaGCTACACTGCCTCTCTCATTACAGTGGCATGAAT +
Preference number: 3 (lower is better)
Translates to: SGLQSPSKAQTI*LHCLSHYSGMN
Trigger: ATTCATGCCACTGTAATGAGAGAGGCAGTGTAGGCAAATGGTCTGAGCCTTGGATGGAGATTGAAGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCGCGTCAACAGTCTTTTaGACCAGACACCATGTTTCT +
Preference number: 3 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGASTVF*TRHHVS
Trigger: AGAAACATGGTGTCTGGTCAAAAAGACTGTTGACGC...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACACAAGAGCATGTGCTaGCATCATCTGACCATAAAT +
Preference number: 3 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIHKSMC*HHLTIN
Trigger: ATTTATGGTCAGATGATGCAAGCACATGCTCTTGTG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCACGAGCAGGCATCAGTaGAAGCTGTACAGATTACTA +
Preference number: 3 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGTSRHQ*KLYRLL
Trigger: TAGTAATCTGTACAGCTTCAACTGATGCCTGCTCGT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp ATCCTGAAGTTGGTGCTGTTTGGAGCTATGACTTACTaGTTTACAGCCAGTGACCCCGTTGATTCCACAGTA +
Preference number: 3 (lower is better)
Translates to: ILKLVLFGAMTY*FTASDPVDSTV
Trigger: TACTGTGGAATCAACGGGGTCACTGGCTGTAAATCAGTAAGTCATAGCTCCAAACAGCACCAACTTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp AAAGTGCCTCCCTACATGAACTATGGGAAGAACAACTaGAGTGAGGAAAAATACACAAGCCCAGCTTGCTGC +
Preference number: 3 (lower is better)
Translates to: KVPPYMNYGKNN*SEEKYTSPACC
Trigger: GCAGCAAGCTGGGCTTGTGTATTTTTCCTCACTTCAGTTGTTCTTCCCATAGTTCATGTAGGGAGGCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTaGACTTCTGCAAGGTTCCTCTTCCGGTCTCAGCTT +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQ*TSARFLFRSQL
Trigger: AAGCTGAGACCGGAAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCATTGGTGGAAGGTGCTaGTGTTTCAGTTCCTCACTG +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQCTSARFIGGRC*CFSSSL
Trigger: CAGTGAGGAACTGAAACACAAGCACCTTCCACCAAT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp CGTCTCTTTGTCAAGCTACTCCAATTATCCCAAGTGTaGTCTCCACCTTGGAAGCAAATCCTCAGTTTACTA +
Preference number: 3 (lower is better)
Translates to: RLFVKLLQLSQV*SPPWKQILSLL
Trigger: TAGTAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTGGAGTAGCTTGACAAAGAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp AAGCTACTCCAATTATCCCAAGTGTGCTCTCCACCTTaGAAGCAAATCCTCAGTTTACTAATGGAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: KLLQLSQVCSPP*KQILSLLMEKA
Trigger: GGCTTTCTCCATTAGTAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTGGAGTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp TCACTTAACAATGTAGGTTGCCAAGGAGGGAAGGATTaGAACCTCTTCCCTCCATACATCTTTAACGACAAG +
Preference number: 3 (lower is better)
Translates to: SLNNVGCQGGKD*NLFPPYIFNDK
Trigger: CTTGTCGTTAAAGATGTATGGAGGGAAGAGGTTTCAATCCTTCCCTCCTTGGCAACCTACATTGTTAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp CTTTTTGGCATGAGACTGCAAATTGTTTATCTTTCATaGCAAGAACTGTGGTCACAGTGCACTTCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: LFGMRLQIVYLS*QELWSQCTSAR
Trigger: CCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAATTTGCAGTCTCATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp GAGAGCAGCTTCTCTATCAACCATTCTCAGAAAAATTaGAACCTGGAGATACATTCGTCTTGTCCAACTCTC +
Preference number: 3 (lower is better)
Translates to: ESSFSINHSQKN*NLEIHSSCPTL
Trigger: GAGAGTTGGACAAGACGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGGTTGATAGAGAAGCTGCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp GCAGGTCATATTCTCCTCACCATATTAAATTATGTCTaGGGAGTTGAGCAGCAGCACATTCCGATAATGATG +
Preference number: 3 (lower is better)
Translates to: AGHILLTILNYV*GVEQQHIPIMM
Trigger: CATCATTATCGGAATGTGCTGCTGCTCAACTCCCCAGACATAATTTAATATGGTGAGGAGAATATGACCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGAAGCTGGTCTGGCATaGAAGTTTTCTATGAAAAAC +
Preference number: 3 (lower is better)
Translates to: GEYLQAIESMHFKERAASEAGLA*KFSMKN
Trigger: GTTTTTCATAGAAAACTTCAATGCCAGACCAGCTTC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp GCTGATGTTTTTCCCTGGTTCCTATTCTTCCAGTGGTaGAGTAATGTGCTCAACTGTTCCTATACTTCTTCA +
Preference number: 3 (lower is better)
Translates to: ADVFPWFLFFQW*SNVLNCSYTSS
Trigger: TGAAGAAGTATAGGAACAGTTGAGCACATTACTTCACCACTGGAAGAATAGGAACCAGGGAAAAACATCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTTTAACACCGTTCCTTaGCAAGAACTAGAAAAACCG +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQCTSARFFNTVP*QELEKP
Trigger: CGGTTTTTCTAGTTCTTGCAAAGGAACGGTGTTAAA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCCATTCTCAGAAAAATaGGAACCTGGAGATACATTC +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQCTSARFPFSEK*EPGDTF
Trigger: GAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTAATATCTTCAAGCCATaGAGTCCATGCATTTTAAGG +
Preference number: 3 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLNIFKP*SPCILR
Trigger: CCTTAAAATGCATGGACTCAATGGCTTGAAGATATT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCACCACATCGCTTTTGTaGGGTTTAAAAAGTACACTA +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQCTSARFTTSLL*GLKSTL
Trigger: TAGTGTACTTTTTAAACCCAACAAAAGCGATGTGGT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCAATATCTTCAAGCCATaGAGTCCATGCATTTTAAGG +
Preference number: 3 (lower is better)
Translates to: IVYLSCQELWSQCTSARFNIFKP*SPCILR
Trigger: CCTTAAAATGCATGGACTCAATGGCTTGAAGATATT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp TCCCTGATTGTGAACAACCAATTGAGTAGTAAATCCTaGACAGTTGACCGCATATACAAGACATTCCGTCAT +
Preference number: 3 (lower is better)
Translates to: SLIVNNQLSSKS*TVDRIYKTFRH
Trigger: ATGACGGAATGTCTTGTATATGCGGTCAACTGTTCAGGATTTACTACTCAATTGGTTGTTCACAATCAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp AATGTAGTGTTTCAAAAGCCAAAGTGCCTCCCTACATaGACTATGGGAAGAACAACTGAAGTGAGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: NVVFQKPKCLPT*TMGRTTEVRKN
Trigger: ATTTTTCCTCACTTCAGTTGTTCTTCCCATAGTTCATGTAGGGAGGCACTTTGGCTTTTGAAACACTACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp GCTTCTCTATCAACCATTCTCAGAAAAATTGGAACCTaGAGATACATTCGTCTTGTCCAACTCTCTTATTCT +
Preference number: 3 (lower is better)
Translates to: ASLSTILRKIGT*RYIRLVQLSYS
Trigger: AGAATAAGAGAGTTGGACAAGACGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGGTTGATAGAGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp CATTGCTGCTGTGTCTCTGAAGTACAAGATGTCATATaGACATCATTACATCAAAGTTACACCAAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: HCCCVSEVQDVI*TSLHQSYTKRA
Trigger: AGCTCTTTTGGTGTAACTTTGATGTAATGATGTTCATATGACATCTTGTACTTCAGAGACACAGCAGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp CCGATAATGATGACAGTTTCCATAACTATAAAGATCTaGTGCACCAGGCAAATTCTGTGCAAAATGCAAATT +
Preference number: 3 (lower is better)
Translates to: PIMMTVSITIKI*CTRQILCKMQI
Trigger: AATTTGCATTTTGCACAGAATTTGCCTGGTGCAGCAGATCTTTATAGTTATGGAAACTGTCATCATTATCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp AATGGTCACAAATATATGCTAAGTAACCAGGGAAGCTaGTCTGGCATTGAAGTTTTCTATGAAAAACACCAA +
Preference number: 3 (lower is better)
Translates to: NGHKYMLSNQGS*SGIEVFYEKHQ
Trigger: TTGGTGTTTTTCATAGAAAACTTCAATGCCAGACCAGCTTCCCTGGTTACTTAGCATATATTTGTGACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR TCA 72 bp TTTTTCTTGGCTGGGCCTGAAATCCTTGGATATTTATaGGTGCATATGAAATGGTCACAAATATATGCTAAG +
Preference number: 3 (lower is better)
Translates to: FFLAGPEILGYL*VHMKWSQIYAK
Trigger: CTTAGCATATATTTGTGACCATTTCATATGCACTCATAAATATCCAAGGATTTCAGGCCCAGCCAAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CCA 72 bp ACCAAATTATGTATATTCCTACGTAAGTGCAAAGCATaGATGAAAAGAATCATACAGGGTAGAAATCCAGCA +
Preference number: 3 (lower is better)
Translates to: TKLCIFLRKCKA*MKRIIQGRNPA
Trigger: TGCTGGATTTCTACCCTGTATGATTCTTTTCATCCATGCTTTGCACTTACGTAGGAATATACATAATTTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR GCA 72 bp ATAATGATGACAGTTTCCATAACTATAAAGATCTGCTaGACCAGGCAAATTCTGTGCAAAATGCAAATTTCT +
Preference number: 3 (lower is better)
Translates to: IMMTVSITIKIC*TRQILCKMQIS
Trigger: AGAAATTTGCATTTTGCACAGAATTTGCCTGGTGCAGCAGATCTTTATAGTTATGGAAACTGTCATCATTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGGTCCCGGGGCTCCCTaGGCTCCAGCCACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPGPGAP*APATSW
Trigger: CCAGGACGTGGCTGGAGCCCAGGGAGCCCCGGGACC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGCCAGGAGTGGGAGCTaGCTGGTCCCTCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPARSGS*LVPRRR
Trigger: CCTCCTGCGAGGGACCAGCCAGCTCCCACTCCTGGC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCCAGTCCACAGGCAGGTaGGGGCTGCCGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPQSTGR*GLPLSP
Trigger: GGGAGAGAGCGGCAGCCCCCACCTGCCTGTGGACTG...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTGCTCCGAAAGGCTGTaGAGGGGGCTGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPCSERL*RGLQGA
Trigger: TGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGGCTCAGACACCTGGTaGTGGGGCATCACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGGSDTW*WGITPG
Trigger: CCCAGGGGTGATGCCCCAGCACCAGGTGTCTGAGCC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGTGGAACTGAGGCTTTaGCCCCCGGGCTGGCTGACG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGVELRL*PPGWLT
Trigger: CGTCAGCCAGCCCGGGGGGCAAAGCCTCAGTTCCAC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGGCTCAGCAATGCCCTaGCTCGGGGAGGCACGCACT +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPGSAMP*LGEART
Trigger: AGTGCGTGCCTCCCCGAGGCAGGGCATTGCTGAGCC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGGCCAGGCCCTGCTCTaGCGGCAGAAGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKGQALL*RQKDRA
Trigger: GGCCCTGTCCTTCTGCCGCCAGAGCAGGGCCTGGCC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAATGCCCCCATCTAGGCTaGCCGTCACTAGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKCPHLG*PSLAGR
Trigger: GCGCCCCGCTAGTGACGGGCAGCCTAGATGGGGGCA...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTCGGACTCGGCGCTGTaGTCCGAAAGGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPSDSAL*SERLCR
Trigger: CCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCGA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGCTGGGGCTGCAGGATaGAGTGGGGTAGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPAGAAG*SGVALS
Trigger: GGACAAGGCTACCCCACTGCATCCTGCAGCCCCAGC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACTGGAGGGCCAGGAGTaGGAGCTGGCTGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKLEGQE*ELAGPS
Trigger: CGAGGGACCAGCCAGCTCCCACTCCTGGCCCTCCAG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGCCGGCTTCCCCACCTaGGTGGGGCCAGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAAGFPT*VGPGPS
Trigger: TGAAGGGCCTGGCCCCACCCAGGTGGGGAAGCCGGC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGAGGCTTCTGCGTCCTaGACCAGGGGTCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKEASAS*TRGPGA
Trigger: AGCCCCGGGACCCCTGGTCCAGGACGCAGAAGCCTC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGCACCTTGCCTGGGCTaGCCAGCGTGGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVAPCLG*PAWGPG
Trigger: GCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGCGGACACAGGTACTTaGCCGCATTCCGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGADTGT*PHSAPC
Trigger: GCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAATCCGAGGCGCCTTCGTaGATCCCCTGGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKSEAPS*IPWHLL
Trigger: GAGCAGGTGCCAGGGGATGCACGAAGGCGCCTCGGA...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCAGGGCGCATGCGGCTaGTCCGCGCTGTCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVQGACG*SALSER
Trigger: GCGCTCCGACAGCGCGGAGCAGCCGCATGCGCCCTG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCACTGTCTCCTCTCCTaGCCACCGTCTCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGHCLLS*PPSPHA
Trigger: AGCATGGGGAGACGGTGGCCAGGAGAGGAGACAGTG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCCCCCAGCTCCCAGTTaGGTACCCAGGGATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGPPAPS*VPRDSG
Trigger: TCCTGAATCCCTGGGTACCCAACTGGGAGCTGGGGG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAAGACAAGGCCAGCTCTaGCCAGCCTGGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKRQGQL*PAWGHT
Trigger: GGTGTGCCCCCAGGCTGGCCAGAGCTGGCCTTGTCT...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTCAAGTGCGGGAGGGTaGCGGCTTCTTCTTCGCACC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGSSAGG*RLLLRT
Trigger: GGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACCTGGTTGTGGGAGATaGGCTGGGCGATGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKPGCGR*AGRCAP
Trigger: AGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCAGCACTCTAGGAGCCTaGGGTGGGGTGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLASTLGA*GGVASE
Trigger: CTCGCTGGCCACCCCACCTCAGGCTCCTAGAGTGCT...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCAGAGAGCCTGGCCCTTaGCAAAGTGCTGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPREPGP*QSAAHA
Trigger: TGCATGGGCAGCACTTTGGCAAGGGCCAGGCTCTCT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGAGCCCCCTGGGCTCCTaGACGGCCCCTCGCCACATC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMSPLGS*TAPRHI
Trigger: GATGTGGCGAGGGGCCGTGCAGGAGCCCAGGGGGCT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGGGCTGGGCCGGGCCTaGGGCTCAGAGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQGLGRA*GSEASA
Trigger: CGCAGAAGCCTCTGAGCCCCAGGCCCGGCCCAGCCC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGGCCTCCAGGGCTGGTaGATTTCCCCAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKGLQGW*ISPRLW
Trigger: CCAGAGCCTTGGGGAAATCCACCAGCCCTGGAGGCC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACCGGCCAAACTGGCCTaGGAGCCTCTACATCACCCC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKPAKLA*EPLHHP
Trigger: GGGGTGATGTAGAGGCTCCCAGGCCAGTTTGGCCGG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCCTGGGGCATCACCCCTaGGACTGTTGGGTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPLGHHP*DCWVGE
Trigger: TTCTCCTACCCAACAGTCCCAGGGGTGATGCCCCAG...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCACGCTGCGGCTGAGTTaGGGGTCAGAAGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPTLRLS*GSEVGW
Trigger: CCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGGTGGGGACTGTGCCTaGGCTCCCTGCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAGGDCA*APCCLF
Trigger: AAAGAGGCAGCAGGGAGCTCAGGCACAGTCCCCACC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCAGACCTGCTATTTCTaGAGAGGTCTGCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGQTCYF*RGLPRG
Trigger: ACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTCTG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCGTCGCCTGCTGCCGCTaGAGGGCGCACGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGVACCR*RAHGFP
Trigger: CGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGAC...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTCATCCCCGTACACCTaGCACTTCTCCTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGSSPYT*HFSWEN
Trigger: GTTCTCCCAGGAGAAGTGGCAGGTGTACGGGGATGA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTGTGGTACAGTGGGATaGGCAGGGCCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGCGTVG*AGPSGT
Trigger: TGTTCCTGAAGGCCCTGCCCATCCCACTGTACCACA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGAGCCTGAGGTGGGGTaGCCAGCGAGGGGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPEPEVG*PARGAL
Trigger: CAGAGCACCCCTCGCTGGCCACCCCACCTCAGGCTC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACAACTCCCTGGCTGCTaGCCTGCTAGTGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKQLPGC*PASGHP
Trigger: AGGATGGCCACTAGCAGGCCAGCAGCCAGGGAGTTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACAGGAAACTCGGCCTTaGGGAGCCAACGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKQETRP*GANAAS
Trigger: TGAGGCTGCGTTGGCTCCCCAAGGCCGAGTTTCCTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAACAGCCGGGAGTTGTTaGGGTGCGTCTGCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRTAGSC*GASASA
Trigger: GGCGGACGCAGACGCACCTCAACAACTCCCGGCTGT...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATCTGGCCGCACTTCCTaGCGCCCGCTCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQSGRTS*RPLCPC
Trigger: GCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATGTGGGGACTGCGGGTaGTGTGGCTCCGGGACGTCC +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTCGDCG*CGSGTS
Trigger: GGACGTCCCGGAGCCACAGCACCCGCAGTCCCCACA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGCCGCCTTTGCCTTCTaGTCCGCGGGCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVAAFAF*SAGRGT
Trigger: TGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAATGTCAGAGTCCTCCCTaGAGTCTGGCTGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKCQSPP*SLAVVS
Trigger: CGAGACCACAGCCAGACTGCAGGGAGGACTCTGACA...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGACACCCTTCACCTTTaGAGTTCAGTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKDTLHL*SSVPGP
Trigger: GGGCCCAGGGACTGAACTGCAAAGGTGAAGGGTGTC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCCTTCGTGCATCCCCTaGCACCTGCTCTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVPSCIP*HLLSPL
Trigger: CAGGGGCGAGAGCAGGTGCCAGGGGATGCACGAAGG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGGGCCGAGACTTGTCTaGGGGCGTCCAGGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIGPRLV*GRPGGA
Trigger: CGCTCCACCTGGACGCCCCCAGACAAGTCTCGGCCC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGCTCCAGCCACGTCCTaGAGCCCTCGACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPAPATS*SPRRRA
Trigger: TGCCCTTCGTCGAGGGCTCCAGGACGTGGCTGGAGC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGCCAATGGGGGTGCCTaGCAGGTCCTCCACCGCGGC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRANGGA*QVLHRG
Trigger: GCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCAGGGCATCGCCAATaGGGGTGCCTGGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPGHRQ*GCLAGP
Trigger: AGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACCCAGGGCTCCTCTCTaGGGCTCAGCAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRPRAPL*GSAMPC
Trigger: GCAGGGCATTGCTGAGCCCCAGAGAGGAGCCCTGGG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGACTTACGCACCAGGTaGAAGCTGATGCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPDLRTR*KLMPKA
Trigger: AGCCTTTGGCATCAGCTTCCACCTGGTGCGTAAGTC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAATGAGACAAGCCCCCTaGGCTCCTGCACGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRMRQAP*APARPL
Trigger: GAGGGGCCGTGCAGGAGCCCAGGGGGCTTGTCTCAT...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACCAGTCCAGAAGCTGTaGTCAGGAGGAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKPVQKL*SGGAGT
Trigger: TGTCCCTGCTCCTCCTGACCACAGCTTCTGGACTGG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGCGAGTTGCTCCTGGTaGCGGGGACACATTCCACGG +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVASCSW*RGHIPR
Trigger: CCGTGGAATGTGTCCCCGTCACCAGGAGCAACTCGC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGGGGCTCCTACTGCCTaGACAGGGACTGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRGAPTA*TGTVSA
Trigger: GGCAGAGACAGTCCCTGTTCAGGCAGTAGGAGCCCC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCAAGGGGGTCTCTGCCTaGGGTAACCTGAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAKGVSA*GNLRRY
Trigger: GTACCTCCTCAGGTTACCTCAGGCAGAGACCCCCTT...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCCTGGGGGCACACCCTaGGGCCGAGTGAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASPGGTP*GRVRAV
Trigger: CACTGCCCTCACTCGGCCTCAGGGTGTGCCCCCAGG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGCTCCGGGACGTCCCTaGGTGGGAAGACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIAPGRP*VGRQGQ
Trigger: CTGGCCTTGTCTTCCCACTCAGGGACGTCCCGGAGC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGGAGCTATGACTTACTaGTTTACAGCCAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGGAMTY*FTASDP
Trigger: GGGGTCACTGGCTGTAAATCAGTAAGTCATAGCTCC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGCAGCAGTAGAAATATaGTCACCCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPAAVEI*SPIEPG
Trigger: GCCTGGCTCTATGGGTGATCATATTTCTACTGCTGC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGCTGGAGCAGCGCTCTaGGTGGAGCCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRAGAAL*VEPPGT
Trigger: TGTACCAGGTGGCTCCACTCAGAGCGCTGCTCCAGC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTGGGCAGGTCGATGCTaGCCTGTTTGGACAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVWAGRC*PVWTAR
Trigger: CCGGGCTGTCCAAACAGGGCAGCATCGACCTGCCCA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATGCGTCTGTGTCCTCTaGGGGCACCAGGGCATCGCC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQCVCVL*GHQGIA
Trigger: GGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGGGCAACTCCCTGGCTaGTGGCCTGCTAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRGQLPG*WPASGH
Trigger: ATGGCCACTAGCAGGCCAGCAGCCAGGGAGTTGCCC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTGGCCCTTGCCAAAGTaGTGCCCATGCAGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAWPLPK*CPCRGD
Trigger: ATCGCCTCTGCATGGGCAGCACTTTGGCAAGGGCCA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCACAGATGCCGCCTTTaGCTTCTGCTCCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMHRCRL*LLLRGQ
Trigger: CTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCTGCTACCAGGAAAGTaGACCGCCAAGTACACAGAT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGLLPGK*TAKYTD
Trigger: ATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCCACGTCATTAACCACTaGCAGGCAGGTGTCAGATTG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPHVINH*QAGVRL
Trigger: CAATCTGACACCTGCCTGGCAGTGGTTAATGACGTG...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGGCAGGTGGGGGCTaGCGCTCTCTCCCGAAAACC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIQAGGG*RSLPKT
Trigger: GGTTTTCGGGAGAGAGCGGCAGCCCCCACCTGCCTG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGACCATCAGACACACATaGCAGTCCAGAAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGTIRHT*QSRSCG
Trigger: ACCACAGCTTCTGGACTGGCATGTGTGTCTGATGGT...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGCCCAGGTGACGCCATaGGGGCAGAGTCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIAQVTP*GQSPKE
Trigger: CTCCTTGGGACTCTGCCCCCATGGCGTCACCTGGGC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGGCCCTCGGGGGCCTTaGCATCCCAGGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASGPRGP*HPRASP
Trigger: CGGAGAAGCCCTGGGATGCCAAGGCCCCCGAGGGCC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACGATGCTGCCCTGTTTaGACAGCCCGGTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRRCCPV*TARSSG
Trigger: CCCGGAAGACCGGGCTGTCCAAACAGGGCAGCATCG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTGCCCTTGCCGGCCATaGCCTCCCGCGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRCPCRP*PPAQQF
Trigger: GAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGGGGTCCGGCCAAACTaGCCTGGGAGCCTCTACATC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVGVRPN*PGSLYI
Trigger: GATGTAGAGGCTCCCAGGCCAGTTTGGCCGGACCCC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACACCTCCTTCCAGCTTaGGGTCCGGCCAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRHLLPA*GPAKLA
Trigger: GGCCAGTTTGGCCGGACCCCAAGCTGGAAGGAGGTG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCTGCGTGGGCCCACCTaGGGTCTCTGCGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGLRGPT*GLCAHR
Trigger: CCTGTGAGCGCAGAGACCCCAGGTGGGCCCACGCAG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGGGTTTTGGGTGCTGTaGGGACTGCGGGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPGFWVL*GLRVLW
Trigger: CCACAGCACCCGCAGTCCCCACAGCACCCAAAACCC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGTCCTCCCTGCAGTCTaGCTGTGGTCTCGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKVLPAV*LWSRDS
Trigger: TGAATCACGAGACCACAGCCAGACTGCAGGGAGGAC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACCCAGGGAGAGGGGCTaGAGCAGCGCTCTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIPRERG*SSALSG
Trigger: TCCACTCAGAGCGCTGCTCCAGCCCCTCTCCCTGGG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGGCGCCCTCGGACTCTaGGGACAGCCGGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRGALGL*GQPGVV
Trigger: AACAACTCCCGGCTGTCCTCAGAGTCCGAGGGCGCC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATCAGGCAACACCACGTaGGCCGCGGCTCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQSGNTT*AAAQPS
Trigger: TGAAGGCTGAGCCGCGGCTCACGTGGTGTTGCCTGA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATGGGAGGCCAGCAGCTaGGTCTCCAGCAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQWEASS*VSSNPR
Trigger: CCTTGGGTTGCTGGAGACTCAGCTGCTGGCCTCCCA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGTTCTTCCGCCAGCCTaGCAACATTTACTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPVLPPA*QHLLVK
Trigger: CTTCACAAGTAAATGTTGTCAGGCTGGCGGAAGAAC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGTCACAGGCACAGACTaGCTGAAGTGTATTCACATG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGVTGTD*LKCIHM
Trigger: CATGTGAATACACTTCAGTCAGTCTGTGCCTGTGAC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTTCTCCTGGTTACTGTaGGATGTGAACCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPFSWLL*DVNQRG
Trigger: TCCCCTTTGGTTCACATCTCACAGTAACCAGGAGAA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGGATCAAGAGCGTCCATaGGACAAGCCCCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMDQERP*DKPPGL
Trigger: GAGCCCAGGGGGCTTGTCTCATGGACGCTCTTGATC...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACCAGGCCCTTCAGGCTaGAGCACAGGGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRPGPSG*STGLSM
Trigger: CATACTCAGCCCTGTGCTGCAGCCTGAAGGGCCTGG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCCGCATTCCGCACCTTaGCTGGGCTGCCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLPHSAP*LGCPAW
Trigger: CCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCAGTCGCGACCACAGTaGGGACACAGGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMQSRPQ*GHRYLP
Trigger: GGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAACGGGAGTTGTTGAGGTaGGTCTGCGTCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQRELLR*VCVRLC
Trigger: GCACAGGCGGACGCAGACGCACCTCAACAACTCCCG...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCTCTCTGTCGGCAAATaGGGACCCTGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMLSVGK*GPWTGS
Trigger: GCTCCCTGTCCAGGGTCCGCATTTGCCGACAGAGAG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCCAGGGCTTCTCCGCTaGCGTCGCCTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFPGLLR*RRLLPL
Trigger: CAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAGCGTGGGCAGGTCGATaGTGCCCTGTTTGGACAGCC +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTAWAGR*CPVWTA
Trigger: GGCTGTCCAAACAGGGCAGCATCGACCTGCCCACGC...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGACCAGGGCCCGGGGATaGCCACTGGGAACGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRTRARG*PLGTSV
Trigger: GACTGACGTTCCCAGTGGGCATCCCCGGGCCCTGGT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACCAAGGCTCTGGCGTTaGCCCTGCGGATATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRPRLWR*PCGYVL
Trigger: GAGGACATATCCGCAGGGGCAACGCCAGAGCCTTGG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTTTGAGGGGGCCAGGTaGTGGGGGCATCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRFEGAR*WGHLPP
Trigger: GGGTGGCAGATGCCCCCAGCACCTGGCCCCCTCAAA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCAGGCCACCCACTGCTaGAGAGAGAGTCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMQATHC*RESPGC
Trigger: ACAGCCAGGACTCTCTCTGCAGCAGTGGGTGGCCTG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCTTCAGTCCCTCAAGTaGGGGAGGGTGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMLQSLK*GRVAAS
Trigger: AGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGTAGTACAGTCACCATaGTCACCAGCAGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGVVQSP*SPADGE
Trigger: TTCTCCATCTGCTGGTGAGCATGGTGACTGTACTAC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCCTTCCTTGCCATGTCTaGCCTGCCTGGCACCATTTG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLALPCHV*PAWHHL
Trigger: CAAATGGTGCCAGGCAGGGCAGACATGGCAAGGAAG...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTGCACGTTGACCATTTaGAGAGTTTGCTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGCTLTI*RVCFLA
Trigger: GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGAGGGGCAGGGCAGGTaGGTTCTGGAACCTCCATTC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVEGQGR*VLEPPF
Trigger: GAATGGAGGTTCCAGAACCCACCTGCCCTGCCCCTC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCCGGGAGGCACCGTGTaGTACAGTGGGATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGPGGTV*YSGMGR
Trigger: CCTGCCCATCCCACTGTACCACACGGTGCCTCCCGG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCGCCAGGGTTGTGTGCTaGCCGCTGGGAGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIARVVC*PLGAQV
Trigger: CACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGC...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCGCACGTTGTCCAGCTaGGCATCGTCCACCACCGCC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRRTLSS*ASSTTA
Trigger: GGCGGTGGTGGACGATGCCCAGCTGGACAACGTGCG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGGCCCTCCTACGGCCTaGCTCCAGCGCGCGGATGTC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFGPPTA*LQRADV
Trigger: GACATCCGCGCGCTGGAGCCAGGCCGTAGGAGGGCC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACACATTCCACGGTGGTaGAGAGCTGAGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRHIPRW*RAEWGR
Trigger: CCGTCCCCACTCAGCTCTCCACCACCGTGGAATGTG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCCGGGGATGCCCACTaGGAACGTCAGTCGAGCTTA +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPGDAH*ERQSSL
Trigger: TAAGCTCGACTGACGTTCCCAGTGGGCATCCCCGGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGGGGTCCTCCTGTCTTaGGTGGGGACTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIGVLLS*VGTVPE
Trigger: CTCAGGCACAGTCCCCACCCAAGACAGGAGGACCCC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCAGCCTCTTCCACCCTaGGTCGGTCACTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMQPLPP*VGHCLL
Trigger: GAGGAGACAGTGACCGACCCAGGGTGGAAGAGGCTG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAAGAGGCAGGCTGCGTaGGCCCACCTGGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRKRQAA*AHLGSL
Trigger: CAGAGACCCCAGGTGGGCCCACGCAGCCTGCCTCTT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCGCTCGCCCACCTGCCTaGCACTCTCCTTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGARPPA*HSPLSP
Trigger: GGGGCTCAAAGGAGAGTGCCAGGCAGGTGGGCGAGC...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAGGTAGCCTTGTCCCTTaGCCCCACCCTCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTGSLVP*PHPLQG
Trigger: GCCCTGAAGAGGGTGGGGCCAAGGGACAAGGCTACC...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGTCCTGGCTGTGCCTTaGTCCCCAGGGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIVLAVP*SPGNGQ
Trigger: CTGCCCATTCCCTGGGGACCAAGGCACAGCCAGGAC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAGTGTGCCTCACACGTTaGAGTGGGCGGGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTVCLTR*SGRGGG
Trigger: ACCTCCTCCCCGCCCACTCCAACGTGTGAGGCACAC...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCGGACTGCGGGTGCTGTaGCTCCGGGACGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIGLRVL*LRDVPE
Trigger: CTCAGGGACGTCCCGGAGCCACAGCACCCGCAGTCC...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACACCCCTGGGACTGTTaGGTAGGAGAACTTGGACAT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKHPWDC*VGELGH
Trigger: ATGTCCAAGTTCTCCTACCCAACAGTCCCAGGGGTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCCAGGGGTCCTGCATaGCTTCAGTCCCTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPRGPA*LQSLKC
Trigger: GCACTTGAGGGACTGAAGCCATGCAGGACCCCTGGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAACTCCCAAGGGGAGCTaGGGAACGCTGCGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQTPKGS*GTLRLS
Trigger: ACTCAGCCGCAGCGTTCCCCAGCTCCCCTTGGGAGT...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCATCATGCCTTGTCCTGTaGGGGAGGCAGCGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPSCLVL*GRQRNP
Trigger: TGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGA...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
3UTR CAA 72 bp ACGAGGCTGGGAGTCAAGGCCCAGTCACTGTGCACGTaGACCATTTGCAGAGTTTGCTTCCTTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TRLGVKAQSLCT*TICRVCFLAMS
Trigger: AGACATGGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGACTCCCAGCCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 72 bp TGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTaGCATGCAAGGCCTCCGTGGCAATGGTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: CVSVPHCPHPNF*HARPPWQWFPM
Trigger: CATGGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR TCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCACTCCACCAAGGACGTaGATTACTCTGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPTPPRT*ITLNKL
Trigger: AAGCTTGTTCAGAGTAATTCACGTCCTTGGTGGAGT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACTTCCACCATCATCCTaGAGTTGGTGCTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKLPPSS*SWCCLE
Trigger: CTCCAAACAGCACCAACTTCAGGATGATGGTGGAAG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCCTTCCCTTAGTTCATaGCAGCATCCCTCTAACTAT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGPSLSS*QHPSNY
Trigger: ATAGTTAGAGGGATGCTGTCATGAACTAAGGGAAGG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTTACGCCAGGGTTGTGTaGTGGCCGCTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASYARVV*WPLGAQ
Trigger: CTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTA...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAGCGGTCGGCGACTTCTaGTCTGGCAACTTACGCCAG +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTAVGDF*SGNLRQ
Trigger: CTGGCGTAAGTTGCCAGAGCAGAAGTCGCCGACCGC...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCTCACAGGCTCTGGTTaGTTCCAGCTGTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVLTGSG*FQLCRS
Trigger: GGACCTGCACAGCTGGAAGCAACCAGAGCCTGTGAG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTGGGGTCCTCCAGGATaGTGTCCGCCTCACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLWGPPG*CPPHLG
Trigger: CCCCAGGTGAGGCGGACAGCATCCTGGAGGACCCCA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCGGGCAGAGGGACACTaGGGCTCAGGCAACACCACG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASRAEGH*GSGNTT
Trigger: CGTGGTGTTGCCTGAGCCGCAGTGTCCCTCTGCCCG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGATCTGCCCAGGGGTCCTaGATGGCTTCAGTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRSAQGS*MASVPQ
Trigger: TTGAGGGACTGAAGCCATGCAGGACCCCTGGGCAGA...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCAAGATGGCTCCTCTTaGAGATTCAGACCTGCTATT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGQDGSS*RFRPAI
Trigger: AATAGCAGGTCTGAATCTGCAAGAGGAGCCATCTTG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAAAGGCCCAGTCACTGTaGACGTTGACCATTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKKAQSL*TLTICR
Trigger: TCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTT...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCCCCAAACTTCTTGCATaGAAGGCCTCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAPKLLA*KASVAM
Trigger: CATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGG...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCCACCCAAACTTCTTaGATGCAAGGCCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPTQTS*MQGLRG
Trigger: GCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCATGCCCCTCTGGTCTTaGACCATCAGACACACATGC +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAMPLWS*TIRHTC
Trigger: GCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCAT...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCCCATTCCGCATCATCTaGATGGCCCACAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAPFRII*MAHNAG
Trigger: TCCAGCATTGTGGGCCATCCAGATGATGCGGAATGG...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACACACCGTGTGGTACAGTaGGATGGGCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTHRVVQ*DGQGLQ
Trigger: CTGAAGGCCCTGCCCATCCCACTGTACCACACGGTG...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCATTCCGCACCTTGCCTaGGCTGCCCAGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFIPHLA*AAQRGA
Trigger: GGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAAT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGCAAGTAGGGGCACGTaGGCACCCGGAGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRASRGT*APGERG
Trigger: ACCCCTTTCTCCGGGTGCCCACGTGCCCCTACTTGC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATTGTGGGAGATGAGCTaGGCGATGCGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTILWEMS*AMRSSS
Trigger: GCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGGCTGCAGGATGCAGTaGGGTAGCCTTGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQGCRMQ*GSLVPW
Trigger: CCAAGGGACAAGGCTACCCCACTGCATCCTGCAGCC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTCTAGGAGCCTGAGGTaGGGTGGCCAGCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISRSLR*GGQRGV
Trigger: CACCCCTCGCTGGCCACCCCACCTCAGGCTCCTAGA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAACCCATGCAGAGGCGATaGATACGGTGGCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQPMQRR*IRWLSP
Trigger: GGGTGACAGCCACCGTATCCATCGCCTCTGCATGGG...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTCCCAGGAGGGCCATTaGGACCCTCATCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRSQEGH*DPHLGG
Trigger: GCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCATGCAGAAGACGAGGCTaGGAGTCAAGGCCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPCRRRG*ESRPSH
Trigger: GTGACTGGGCCTTGACTCCCAGCCTCGTCTTCTGCA...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATCCTCTCTCCTCTTCTaGAGTCTCCCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTISSLLF*SLPRAG
Trigger: CCCAGCCCTGGGGAGACTCCAGAAGAGGAGAGAGGA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGCTGTCTGGGGAGCTTaGTGTCAGAGTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRAVWGA*CQSPPC
Trigger: GCAGGGAGGACTCTGACATCAAGCTCCCCAGACAGC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTGGGGAACGCTGCGGCTaGGTTGGGGGTCAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLGERCG*VGGQKL
Trigger: CAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCCC...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGAAGAACAACTGAAGTaGGGAAAAATACACAAGCCC +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGEEQLK*GKIHKP
Trigger: GGGCTTGTGTATTTTTCCTCACTTCAGTTGTTCTTC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTCCTCTTCTGGGAATTaGACTCATGGCCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLASSSGN*THGPKS
Trigger: ACTCTTGGGGCCATGAGTTCAATTCCCAGAAGAGGA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCACAGGACAGGCAGAGTaGCCACGATGTTCACCGTCA +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVTGQAE*PRCSPS
Trigger: TGACGGTGAACATCGTGGGCACTCTGCCTGTCCTGT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTCCGCTGCCGTCGCCTaGTGCCGCTGCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLSAAVA*CRCRAH
Trigger: GTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGGGCTGCAGGGCGCATaGGGCTGCTCCGCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLGLQGA*GCSALS
Trigger: CGACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACCTCCCTGGCTTTCTTaGCTCCATGGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIPPWLS*LHGDWL
Trigger: AAGCCAGTCCCCATGGAGGCAAGAAAGCCAGGGAGG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCCAGGGGGCTCCTACTaGCTGAACAGGGACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRPGGSY*LNRDCL
Trigger: GAGACAGTCCCTGTTCAGGCAGTAGGAGCCCCCTGG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGGTTGCTTCCAGCTGTaGAGGTCCTCCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRGCFQL*RSSTFS
Trigger: GCTGAAAGTGGAGGACCTGCACAGCTGGAAGCAACC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAAGAGAGTCCTGGCTGTaGCTTGGTCCCCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTRESWL*LGPQGM
Trigger: CATTCCCTGGGGACCAAGGCACAGCCAGGACTCTCT...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACCAAAGTGCTGCCCATaGAGAGGCGATGGATACGGT +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRPKCCP*RGDGYG
Trigger: ACCGTATCCATCGCCTCTGCATGGGCAGCACTTTGG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACAAGGTCAAGACCTTTaGCAGGGGGTAGAGGCACGT +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRQGQDL*QGVEAR
Trigger: ACGTGCCTCTACCCCCTGGCAAAGGTCTTGACCTTG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCACTATAAAGATCTGCTaGACCAGGCAAATTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPTIKIC*TRQILC
Trigger: GCACAGAATTTGCCTGGTGCAGCAGATCTTTATAGT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCACCAGCCCTTTAAGTaGTCAGTCCACAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMHQPFK*SVHRQV
Trigger: CACCTGCCTGTGGACTGAGCACTTAAAGGGCTGGTG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACTAACATCCACCGCATaGTCTCTCCATTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKLTSTA*SLHCQK
Trigger: CTTCTGACAATGGAGAGAGCATGCGGTGGATGTTAG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCAGGGCAGGTGGGTTCTaGAACCTCCATTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVRAGGF*NLHSAS
Trigger: TGATGCGGAATGGAGGTTCCAGAACCCACCTGCCCT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGATCTTCAGCCTTCTCTaGCCGCACTTCCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRIFSLL*PHFLPP
Trigger: GGGCGGCAGGAAGTGCGGCCAGAGAAGGCTGAAGAT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGTCGGCATCCTGCTTCTaGGATGACAAAGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMSASCF*DDKEAG
Trigger: GCCTGCCTCTTTGTCATCCCAGAAGCAGGATGCCGA...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCTGCAGAGAGAGTCCTaGCTGTGCCTTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGLQRES*LCLGPQ
Trigger: CTGGGGACCAAGGCACAGCCAGGACTCTCTCTGCAG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCGGGACGTCCCTGAGTaGGAAGACAAGGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGRDVPE*EDKASS
Trigger: AGAGCTGGCCTTGTCTTCCCACTCAGGGACGTCCCG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAACCGGCTTGGAATACTaGGGAATTTTCTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKTGLEY*GIFSVQ
Trigger: CTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGT...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGAGGCCTCCGTGGCAATaGTTCCCCATGGGGAATATC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMRPPWQ*FPMGNI
Trigger: GATATTCCCCATGGGGAACCATTGCCACGGAGGCCT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCACAGCAATAATTGGTaGAAGGTGCTTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGHSNNW*KVLVFQ
Trigger: CTGAAACACAAGCACCTTCCACCAATTATTGCTGTG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAATCCTGCTTCTGGGATaGCAAAGAGGCAGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQILLLG*QRGRLR
Trigger: ACGCAGCCTGCCTCTTTGTCATCCCAGAAGCAGGAT...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCAGGCCTTTGAGCATCTaGGAAGATGTATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLARPLSI*EDVWFG
Trigger: CCCAAACCATACATCTTCTCAGATGCTCAAAGGCCT...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCACTCCGCTTTCCACTaGAGCTGGTTCCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGHSAFH*SWFPLG
Trigger: CCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAGTG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGATCAGTCCACACCTGCTaGATGACAGAGAACTGCGAC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRSVHTC*MTENCD
Trigger: GTCGCAGTTCTCTGTCATTCAGCAGGTGTGGACTGA...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTGGAGCTTGGTGTCGTaGGCGACTGTAGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVWSLVS*ATVGMF
Trigger: GAACATTCCTACAGTCGCTCACGACACCAAGCTCCA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTCCCAAGGTCAGCCATaGTGGGTGGTCCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRSQGQP*WVVLSP
Trigger: AGGAGAGAGGACCACCCATCATGGCTGACCTTGGGA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGGCTGTGCAGGGGGCTaGAGGGCGCATGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLGCAGG*RAHAAA
Trigger: AGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTTGGGTGGGGACTGTaGCTGAGCTCCCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFLGWGL*LSSLLP
Trigger: AGGCAGCAGGGAGCTCAGGCACAGTCCCCACCCAAG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCTCTGGCGTTGCCCCTaGGGATATGTCCTCATGGAC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRLWRCP*GYVLMD
Trigger: GTCCATGAGGACATATCCGCAGGGGCAACGCCAGAG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAACAGGGACTGTCTCTaGCACCCAGTGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRNRDCL*HPVQGM
Trigger: CATCCCCTGCACTGGGTGGCAGAGACAGTCCCTGTT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAACGCCAAGTACACAGATaGCGCCTTTGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQRQVHR*RLCLLL
Trigger: GAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCG...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCCTCATCTCGGAGGCTaGTACCAGGAAAGTGCACCG +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRPHLGG*YQESAP
Trigger: CGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGGAGAACTTGGACATCTaGGCCGGCCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRENLDI*AGPPSP
Trigger: TGGAGAAGGAGGGCCGGCGCAGATGTCCAAGTTCTC...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCATGTGTGAGATGCTCTaGATTGCTGCTGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAMCEML*IAAVSL
Trigger: CAGAGACACAGCAGCAATGCAGAGCATCTCACACAT...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTATAGGCTGGATGATTaGACCCTAAAATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGYRLDD*TLKSGT
Trigger: AGTTCCAGATTTTAGGGTGCAATCATCCAGCCTATA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGGTGGCTTCGCTACCTaGTTTACCTTTGTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKGGFAT*FTFVRD
Trigger: ATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCATGCAGGTGCTGTCATaGCTTGTCCTGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGMQVLS*LVLWGR
Trigger: CCTCCCCCACAGGACAAGGCATGACAGCACCTGCAT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATCCAGACCCCAAATGTaGAGTCACGTGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQSRPQM*SHVAGS
Trigger: GCTTCCTGCCACGTGACTGCACATTTGGGGTCTGGA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACAATGCTGGAAAACTTaGCAAGAGCAAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKQCWKT*QEQASF
Trigger: GAATGAGGCTTGCTCTTGGCAAGTTTTCCAGCATTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTGGCAAATGCGGACCCTaGACAGGGAGCAGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLGKCGP*TGSSFG
Trigger: ACCGAAGCTGCTCCCTGTCCAGGGTCCGCATTTGCC...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGCTTTCTTGCCTCCATaGGGACTGGCTTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAAFLPP*GLAFIF
Trigger: GAAAATGAAAGCCAGTCCCCATGGAGGCAAGAAAGC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGCGGATATGTCCTCATaGACAGGGGTCCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQADMSS*TGVLLS
Trigger: AGACAGGAGGACCCCTGTCCATGAGGACATATCCGC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAATTTCCCCAAGGCTCTaGCGTTGCCCCTGCGGATAT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQISPRL*RCPCGY
Trigger: ATATCCGCAGGGGCAACGCCAGAGCCTTGGGGAAAT...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGGAGGCCTCCAGGGCTaGTGGATTTCCCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFGGLQG*WISPRL
Trigger: GAGCCTTGGGGAAATCCACCAGCCCTGGAGGCCTCC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTCCCATCCTGTGGCCTaGAACAGCTGGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISHPVA*NSWGPP
Trigger: TGGAGGACCCCAGCTGTTCCAGGCCACAGGATGGGA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATTTTCTCCCATCCTGTaGCCTGGAACAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIFSPIL*PGTAGV
Trigger: GACCCCAGCTGTTCCAGGCCACAGGATGGGAGAAAA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAGGCGATGGATACGGTaGCTGTCACCCTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGRRWIR*LSPSMS
Trigger: GGACATGGAGGGTGACAGCCACCGTATCCATCGCCT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCATCCCCAGAGAGCCTaGCCCTTGCCAAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLHPQRA*PLPKCC
Trigger: GCAGCACTTTGGCAAGGGCCAGGCTCTCTGGGGATG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTTGGGTAGGAGAACTTaGACATCTGCGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRLGRRT*TSAPAL
Trigger: GAGGGCCGGCGCAGATGTCCAAGTTCTCCTACCCAA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTCTGGCTCAGACACCTaGTGCTGGGGCATCACCCCT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISGSDT*CWGITP
Trigger: AGGGGTGATGCCCCAGCACCAGGTGTCTGAGCCAGA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGTGATCTGTTCTCACTaGCAGAGAAATACAAACGGC +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKVICSH*QRNTNG
Trigger: GCCGTTTGTATTTCTCTGCCAGTGAGAACAGATCAC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAGTTTCTCCTCTCCCGTaGAAGGAGAGGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTVSPLP*KERERK
Trigger: CTTCCTCTCCCTCTCCTTCCACGGGAGAGGAGAAAC...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCATGCAAGGCCTCCGTaGCAATGGTTCCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLHARPP*QWFPMG
Trigger: CCCCATGGGGAACCATTGCCACGGAGGCCTTGCATG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGGAAGTTGGTGCTGTTTaGAGCTATGACTTACTGATT +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGEVGAV*SYDLLI
Trigger: AATCAGTAAGTCATAGCTCCAAACAGCACCAACTTC...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTCTAACTATTCTCTGTaGAAGAAACTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGSNYSL*KKLRHQ
Trigger: CTGATGCCTCAGTTTCTTCCACAGAGAATAGTTAGA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTCAGGGCTAAGTGTGTaGCTGGGTCTCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVSGLSV*LGLSRK
Trigger: TTTCCTGCTGAGACCCAGCCACACACTTAGCCCTGA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATTGGCCATGCCCCTCTaGTCTTGCACCATCAGACAC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTILAMPL*SCTIRH
Trigger: GTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
3UTR CAA 72 bp GGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTaGTGGAGAAATGTGTTGATGGTGGCTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GESQLPRLCGVH*WRNVLMVAFLV
Trigger: AACCAAGAAAGCCACCATCAACACATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR TCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCGTGGCAGCAGTGCTGTaGGTAGTACAGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGVAAVL*VVQSPC
Trigger: GCATGGTGACTGTACTACTCACAGCACTGCTGCCAC...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGACTGGCTGTGGTCTCGTaGTTCAGCACTGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRLAVVS*FSTVNF
Trigger: GAAATTCACAGTGCTGAATCACGAGACCACAGCCAG...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCTCTGCCCTCTTCTGTaGCTTTGCTGTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASLCPLL*LCCLGS
Trigger: GCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCCTCTGTGGAAGAAACTaGGGCATCAGTTGGTTAAGA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLALCGRN*GISWLR
Trigger: TCTTAACCAACTGATGCCTCAGTTTCTTCCACAGAG...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACCAAGTGGCAGAGGCTaGTGTTTTTCCCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIPSGRG*CFSLVP
Trigger: AGGAACCAGGGAAAAACATCAGCCTCTGCCACTTGG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGACTCCCTCACTTCCCTaGACTTGCTGGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRTPSLP*TCWRDH
Trigger: GTGGTCTCTCCAGCAAGTTCAGGGAAGTGAGGGAGT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCAGAGGCTCGCCCACCTaGCTGGCACTCTCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFRGSPT*LALSFE
Trigger: CTCAAAGGAGAGTGCCAGGCAGGTGGGCGAGCCTCT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGGAAAAGGCATTATCTaGCAGGGCAGAGAGCACTCT +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPGKGII*QGREHS
Trigger: AGAGTGCTCTCTGCCCTGGCAGATAATGCCTTTTCC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCAGGTCCATCCTCCATTaGTCCCAGGAGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIRSILH*SQEGHW
Trigger: CCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCATTTCTGAAGAGGTCTaGCCAGGGGTCCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGISEEV*PGVLHG
Trigger: GCCATGCAGGACCCCTGGGCAGACCTCTTCAGAAAT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGAACTGTGGTCACAGTaGACTTCTGCAAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPELWSQ*TSARFL
Trigger: GAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGATTGTTTATCTTTCATaGCAAGAACTGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGIVYLS*QELWSQ
Trigger: CTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACATCACAGCAGGCCATaGACAGAGACTCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPHHSRP*TETPQK
Trigger: TTTCTGTGGAGTCTCTGTGCATGGCCTGCTGTGATG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAGGAATGTTCGTCTCTaGCTTGGCTGTGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGRNVRL*LGCAWP
Trigger: AGGCCAGGCACAGCCAAGGCAGAGACGAACATTCCT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTCCGCATCATCTGGATaGCCCACAATGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVSASSG*PTMLEN
Trigger: GTTTTCCAGCATTGTGGGCCATCCAGATGATGCGGA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTGTAGGTGTAGGGCGTaGGCAGGTCGATGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFCRCRA*AGRCCP
Trigger: AGGGCAGCATCGACCTGCCCACGCCCTACACCTACA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCGGACACATTCCACGGTaGTGGAGAGCTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIGHIPR*WRAEWG
Trigger: TCCCCACTCAGCTCTCCACCACCGTGGAATGTGTCC...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCCCATTCCCACCTCCCTaGCTTTCTTGCCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIPFPPP*LSCLHG
Trigger: CCCATGGAGGCAAGAAAGCCAGGGAGGTGGGAATGG...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCATCTCAGGACAGTCTaGGCCCACAGGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFHLRTV*AHRQVS
Trigger: GGAGACCTGCCTGTGGGCCCAGACTGTCCTGAGATG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTGCGCTCACAGGCTCTaGTTGCTTCCAGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLCAHRL*LLPAVQ
Trigger: CTGCACAGCTGGAAGCAACCAGAGCCTGTGAGCGCA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTTGGGGGTCAGAAGTTaGTTGGAGTTGGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLALGVRS*LELACK
Trigger: TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACATGTCTGCCCTGCCTaGCACCATTTGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIHVCPA*HHLKMS
Trigger: GCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGTGTGCTCTCCACCTTaGAAGCAAATCCTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAVCSPP*KQILSL
Trigger: TAAACTGAGGATTTGCTTCCAAGGTGGAGAGCACAC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGGGTGTAGGTACAGGTaGAGAGAGAAACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIGCRYR*REKPGE
Trigger: CTCACCAGGTTTCTCTCTCCACCTGTACCTACACCC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTGCCTTGGCTGTGCCTaGCCTCACAATGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLCLGCA*PHNGTQ
Trigger: CTGGGTTCCATTGTGAGGCCAGGCACAGCCAAGGCA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGATCCGTCCATTCTCTaGTCTGTGGAGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQDPSIL*SVELGV
Trigger: GACACCAAGCTCCACAGACCAGAGAATGGACGGATC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTGGGAATTGAACTCATaGCCCCAAGAGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAWELNS*PQEYVS
Trigger: TGACACATACTCTTGGGGCCATGAGTTCAATTCCCA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAATGAAGGAGCACCTCTaGGGCCTCAGAGGAATTCGA +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTMKEHL*GLRGIR
Trigger: TCGAATTCCTCTGAGGCCCCAGAGGTGCTCCTTCAT...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAACTACTGGCTCTCAGCTaGACACAGCTCTGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQLLALS*TQLCKK
Trigger: TTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAG...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGATTTCCTGGGCTATGTaGTCTGTTCTCACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMISWAM*SVLTGR
Trigger: TCTGCCAGTGAGAACAGATCACATAGCCCAGGAAAT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCGCTGCTGGTGTCACTaGACTCTACTCGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRRCWCH*TLLEFA
Trigger: AGCAAACTCGAGTAGAGTTCAGTGACACCAGCAGCG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTTTCTTGGCTGGGCCTaGAATCCTTGGATATTTATG +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAFLGWA*NPWIFM
Trigger: CATAAATATCCAAGGATTTCAGGCCCAGCCAAGAAA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCTGGGGTTGTTTTGGTaGGACAGGATGTTCACATCT +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVLGLFW*DRMFTS
Trigger: AGATGTGAACATCCTGTCTCACCAAAACAACCCCAG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGCCACCGTCTCCCCATaGTTAGTGGGTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFATVSP*LVGSVT
Trigger: GGTGACTGAACCCACTAAGCATGGGGAGACGGTGGC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCCCGGGATCGGCATCCTaGTTCTGGGATGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIPGSAS*FWDDKE
Trigger: CTCTTTGTCATCCCAGAAGCAGGATGCCGATCCCGG...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTGGCAAGAGGGTCTGTaGTCTGCCCTCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIWQEGL*SALFCD
Trigger: GTCACAGAAGAGGGCAGAGCACAGACCCTCTTGCCA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTAGTGCCATTTGATTaGAGAGAGGCAGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQLVPFD*REAVGD
Trigger: GTCCCCCACTGCCTCTCTGCAATCAAATGGCACTAA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTATGGAGAAAGCCAGTTaGCTCGACTGTGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLMEKAS*LDCVGS
Trigger: GGACCCCACACAGTCGAGGCAACTGGCTTTCTCCAT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAGATCTGTTTTCTTCTaGACAGGGGCGCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRRSVFF*TGAHRL
Trigger: AAGCCGGTGCGCCCCTGTGCAGAAGAAAACAGATCT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCATCCCATCTCTGCCTCTaGTTCTCTTTATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPSHLCL*FSLCLL
Trigger: GAGAAGGCATAAAGAGAAGCAGAGGCAGAGATGGGA...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCTCTCTCATTGGCCATaGCCCTCTGGTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASLSHWP*PSGLAP
Trigger: TGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACACTGGATGGCCCACAATaGTGGAAAACTTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTLDGPQ*WKTCQE
Trigger: CTCTTGGCAAGTTTTCCAGCATTGTGGGCCATCCAG...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCGCTTCTCTAGAACACTaGGCTTCAGGCAGTCGCGAC +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIASLEH*ASGSRD
Trigger: GTCGCGACTGCCTGAAGCCCAGTGTTCTAGAGAAGC...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTCACATCCAGGTTCTTaGCAAGTAGGGGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISHPGS*QVGARG
Trigger: CCCACGTGCCCCTACTTGCCAAGAACCTGGATGTGA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCCTGCAGTCTGGCTGTaGTCTCGTGATTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASPAVWL*SRDSAL
Trigger: CAGTGCTGAATCACGAGACCACAGCCAGACTGCAGG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTATTGCAGAGAGGCAGTaGGGGACAGGTGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLIAERQ*GTGAED
Trigger: GTCTTCTGCACCTGTCCCCCACTGCCTCTCTGCAAT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTGTCTTTCGTTCCTGTaGATCCGTCCATTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVCLSFL*IRPFSG
Trigger: ACCAGAGAATGGACGGATCCACAGGAACGAAAGACA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGAGCAGCGCTCTGAGTaGAGCCACCTGGTACACTCA +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFEQRSE*SHLVHS
Trigger: TGAGTGTACCAGGTGGCTCCACTCAGAGCGCTGCTC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGATGGCCCACAATGCTaGAAAACTTGCCAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRDGPQC*KTCQEQ
Trigger: TTGCTCTTGGCAAGTTTTCCAGCATTGTGGGCCATC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
3UTR CAA 72 bp GAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTaGTCAAGCTACTCCAATTATCCCAAGTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EVSLCPVHTPVS*SSYSNYPKCAL
Trigger: GAGAGCACACTTGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
3UTR CAA 72 bp GTCAGGACTTCAATCTCCATCCAAGGCTCAGACCATTaGCCTACACTGCCTCTCTCATTACAGTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: VRTSISIQGSDH*PTLPLSLQWHE
Trigger: TTCATGCCACTGTAATGAGAGAGGCAGTGTAGGCAAATGGTCTGAGCCTTGGATGGAGATTGAAGTCCTGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR TCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTCACCCTCCATGTCCTaGACTAAGTGTGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLSPSMS*TKCASH
Trigger: GTGTGAGGCACACTTAGTTCAGGACATGGAGGGTGA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCGTCAACAGTCTTTTTaGCCAGACACCATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVRQQSF*PDTMFL
Trigger: GAGAAACATGGTGTCTGGTCAAAAAGACTGTTGACG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAAGTCACTGTGCACGTTaGCCATTTGCAGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQSHCAR*PFAEFA
Trigger: AGCAAACTCTGCAAATGGTCAACGTGCACAGTGACT...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTTGGTTAGTGCCATTTaGTTGCAGAGAGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRLVSAI*LQRGSG
Trigger: CCCACTGCCTCTCTGCAATCAAATGGCACTAACCAA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTTATGTCTGGGGAGTTaGGCAGCAGCACATTCCGAT +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRLCLGS*AAAHSD
Trigger: ATCGGAATGTGCTGCTGCTCAACTCCCCAGACATAA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGAAGGAACACAATTTGTaGAGACCCAAGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMKEHNL*RPKSSQ
Trigger: TTGGGAGGACTTGGGTCTTCACAAATTGTGTTCCTT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGGTACCCCGAGTCGGTaGTCTCACACTTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLGTPSR*SHTSAA
Trigger: GGCTGCGGAAGTGTGAGAGCACCGACTCGGGGTACC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAACCATTTGCAGAGTTTaGTTCCTTGCCATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTITICRV*FLAMSA
Trigger: GGCAGACATGGCAAGGAAGCAAACTCTGCAAATGGT...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCTTTTCCCCTGACCAGTaGCTCCTAAGACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGFSPDQ*LLRQRS
Trigger: GCTCCTTTGTCTTAGGAGGCACTGGTCAGGGGAAAA...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAAGAAGATGTATGGTTTaGGATCTGTTGAGACTGAAT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKRRCMV*DLLRLN
Trigger: ATTCAGTCTCAACAGATCCCAAACCATACATCTTCT...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGGTAGCAATGTCATGGTaGGGAAAAGTTCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMVAMSW*GKVPLD
Trigger: GTCCAAAGGAACTTTTCCCCACCATGACATTGCTAC...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATTCTATGGGCTGCTCTaGCTTAGAAGGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIFYGLL*LRRNHR
Trigger: TCTGTGGTTCCTTCTAAGCCAGAGCAGCCCATAGAA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCAGTAACCAGGGAAGCTaGTCTGGCATTGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVSNQGS*SGIEVF
Trigger: GAAAACTTCAATGCCAGACCAGCTTCCCTGGTTACT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCACCAGGGAAGCAAGGTaGCTTCGCTACCTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIITREAR*LRYLLY
Trigger: GTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATCATGCCAAGAACTGTaGTCACAGTGCACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTISCQEL*SQCTSA
Trigger: TGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAAGCTGGTTCCCTCTTaGGGTTTGGTTCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGKLVPS*GLVPLT
Trigger: TGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCAAATGTGCAGTCACGTaGCAGGAAGCCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFKCAVT*QEAPGR
Trigger: TCTCCCTGGGGCTTCCTGCCACGTGACTGCACATTT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCATTAATCCAGATACCTaGCGTTTCCTACCGTCACTT +
Preference number: 4 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVINPDT*RFLPSL
Trigger: AAGTGACGGTAGGAAACGTCAGGTATCTGGATTAAT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACAGAATCTTTCCGAGTaGTTAATCCAGATACCTGAC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPQNLSE*LIQIPD
Trigger: GTCAGGTATCTGGATTAATCACTCGGAAAGATTCTG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGACAACATTTACTTGTaGAGCGTCAACAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLADNIYL*SVNSLF
Trigger: AAAAAGACTGTTGACGCTTCACAAGTAAATGTTGTC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTTTCTCTGTGCAGTTCTaGCGTGCACAATACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASFSVQF*RAQYRG
Trigger: GCCTCTGTATTGTGCACGTCAGAACTGCACAGAGAA...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGAGAGAGAAACCTGGTaGGTCTTGAACATCATGGGG +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASERETW*VLNIMG
Trigger: CCCCATGATGTTCAAGACTCACCAGGTTTCTCTCTC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCAACCGGTGGCTCCGATaGGGCAGGAGCATTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLNRWLR*GRSILP
Trigger: AGGGAGAATGCTCCTGCCTCATCGGAGCCACCGGTT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATCAGTTTTCTCTGCTTaGTGTTCCCACGAGACATCT +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTISVFSA*CSHETS
Trigger: AGATGTCTCGTGGGAACAGCAAGCAGAGAAAACTGA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAAGGCAGGTGTCAGATTaGAGAGATAATCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQRQVSD*RDNPDV
Trigger: CACATCAGGATTATCTCTGCAATCTGACACCTGCCT...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTTGCCATGTCTGCCCTaGCTGGCACCATTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIILPCLP*LAPFED
Trigger: ATCTTCAAATGGTGCCAGGCAGGGCAGACATGGCAA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGTCACAGTGCACTTCTaGAAGGTTCCTCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFVTVHF*KVPLPV
Trigger: GACCGGAAGAGGAACCTTGCAGAAGTGCACTGTGAC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTCAGACACCTGGTGCTaGGGCATCACCCCTGGGACT +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLSDTWC*GITPGT
Trigger: AGTCCCAGGGGTGATGCCCCAGCACCAGGTGTCTGA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGAGGTAGCAATGTCATaGTGGGGAAAAGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQEVAMS*WGKVPL
Trigger: CAAAGGAACTTTTCCCCACCATGACATTGCTACCTC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACAAGGAAATACTTTTTaGCATGAGACTGCAAATTGT +
Preference number: 4 (lower is better)
Translates to: GNAAAELGVRSWLELACKQGNTF*HETANC
Trigger: ACAATTTGCAGTCTCATGCCAAAAAGTATTTCCTTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGCTGATGTTTTTCCCTaGTTCCTATTCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIADVFP*FLFFQW
Trigger: CCACTGGAAGAATAGGAACCAGGGAAAAACATCAGC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
3UTR CAA 72 bp GAAGCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTaGCCTCGACTGTGTGGGGTCCACTTGTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: EANPQFTNGESQ*PRLCGVHLWRN
Trigger: ATTTCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR TCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTCTGGTAGATCCTTTTaGACGTCTCATCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIISGRSF*TSHPRT
Trigger: TGTACGGGGATGAGACGTTCAAAAGGATCTACCAGA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATGCTGTTTGGAGCTATaGCTTACTGATTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: HRLGILGNFLCAVLTCTICCLEL*LTDLQP
Trigger: TGGCTGTAAATCAGTAAGTCATAGCTCCAAACAGCA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCAAGGAGGGAAGGATTaGAACCTCTTCCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFQGGKD*NLFPPY
Trigger: GTATGGAGGGAAGAGGTTTCAATCCTTCCCTCCTTG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGATTGAGTAGTAAATCCTaGACAGTTGACCGCATATAC +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRLSSKS*TVDRIY
Trigger: GTATATGCGGTCAACTGTTCAGGATTTACTACTCAA...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGCACCAGGTGGAAGCTaGTGCCAAAGGCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLAPGGS*CQRLQS
Trigger: GCTTTGGAGCCTTTGGCATCAGCTTCCACCTGGTGC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCCGCAGCAGTTCTCTTTaGGTCTGTGTCCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLRSSSL*VCVLCG
Trigger: CCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCG...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCAGGAAAGCCCAGTTCTaGCCCACTGCCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLRKAQF*PTAHSH
Trigger: GTGGGAATGGGCAGTGGGGCAGAACTGGGCTTTCCT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCATCTTCAGTTTTCTCTaGTTGCTGTTCCCACGAGAC +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGIFSFL*LLFPRD
Trigger: GTCTCGTGGGAACAGCAAGCAGAGAAAACTGAAGAT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCACAGAAGTATCTTTGTaGCCAGTTCACACCCCCGTC +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFTEVSL*PVHTPV
Trigger: GACGGGGGTGTGAACTGGGCACAAAGATACTTCTGT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAGAAAAAGTCTGTCTTaGCCTAGGTTACCCACCATG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGRKSLS*PRLPTM
Trigger: CATGGTGGGTAACCTAGGGCAAGACAGACTTTTTCT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGAGGTGATTCTGAGGTaGCACAAGATGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFEVILR*HKMAPL
Trigger: AAGAGGAGCCATCTTGTGCCACCTCAGAATCACCTC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCGAAGTTGGTTGGAGTTaGCTTGTAAATAACTCAAAA +
Preference number: 4 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAEVGWS*LVNNSK
Trigger: TTTTGAGTTATTTACAAGCCAACTCCAACCAACTTC...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCGGCAATGGTTCCCCATaGGGAATATCTTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIGNGSP*GISSSH
Trigger: ATGGCTTGAAGATATTCCCCATGGGGAACCATTGCC...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAATATTAAATTATGTCTaGGGAGTTGAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPILNYV*GVEQQH
Trigger: GTGCTGCTGCTCAACTCCCCAGACATAATTTAATAT...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCACGGAACTTCTTAGCTaGGGTTGTTTTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGTELLS*GCFGET
Trigger: TGTCTCACCAAAACAACCCCAGCTAAGAAGTTCCGT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTTGCAGTTCAGTCCCTaGGCCCTTCTCCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLLQFSP*ALLQTP
Trigger: TGGGGTCTGGAGAAGGGCCCAGGGACTGAACTGCAA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTATATTCCGCCATATTTaGCCTAGGTTGGGATGTGAC +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASIFRHI*PRLGCD
Trigger: GTCACATCCCAACCTAGGTCAAATATGGCGGAATAT...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAAAAGAAGGAAATCCCTaGTCTTTAAACTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPKEGNP*SLNSGL
Trigger: CAAACCAGAGTTTAAAGATCAGGGATTTCCTTCTTT...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCAAACCTGGTGAGTCTTaGACATCATGGGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIKPGES*TSWGNV
Trigger: GACATTTCCCCATGATGTTCAAGACTCACCAGGTTT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTAAGTGCCTCCCTACATaGACTATGGGAAGAACAACT +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLKCLPT*TMGRTT
Trigger: AGTTGTTCTTCCCATAGTTCATGTAGGGAGGCACTT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAAGTGCAAAGCATGGATaGAAAGAATCATACAGGGTA +
Preference number: 4 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTSAKHG*KESYRV
Trigger: TACCCTGTATGATTCTTTTCATCCATGCTTTGCACT...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTCCACACCTGCTGAATaGCAGAGAACTGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLSTPAE*QRTATP
Trigger: GGGAGTCGCAGTTCTCTGTCATTCAGCAGGTGTGGA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGCACCCAGGTTGGTGTaGGAAGTCTACTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLAPRLV*EVYWLS
Trigger: TGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTAGGCACAAGAGCATGTaGTTGCATCATCTGACCATA +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLRHKSM*LHHLTI
Trigger: TATGGTCAGATGATGCAAGCACATGCTCTTGTGCCT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTGTGCAGTTCTGACGTaGACAATACAGAGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLCAVLT*TIQRLI
Trigger: AATCAGCCTCTGTATTGTGCACGTCAGAACTGCACA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAAGCCATTGAGTCCATaGATTTTAAGGAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGKPLSP*ILRREQ
Trigger: CTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCCTAGGTTACCCACCATaGTATTGGCAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIILGYPP*YWQCFH
Trigger: ATGGAAACACTGCCAATAGCATGGTGGGTAACCTAG...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCAGTCTATATTCCAATaGAGGTGCTGTCATGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLQSIFQ*RCCHAL
Trigger: CAAGGCATGACAGCACCTGCATTGGAATATAGACTG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTGCCTCCATGGGGACTaGCTTTCATTTTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFCLHGD*LSFSGR
Trigger: TCTACCAGAAAATGAAAGCCAGTCCCCATGGAGGCA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTCTTCGCACCCAGGTTaGTGTGCGAAGTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLSSHPG*CAKSTG
Trigger: GCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTGTCTCCCTTCCTTGTaGTGTGAACTAGCTGAACTT +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLCLPSL*CELAEL
Trigger: AAGTTCAGCTAGTTCACACCACAAGGAAGGGAGACA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTTCTCCATTCCTACTaGAGAGTTCTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQFLHSY*RVLVLL
Trigger: AAGCAAAACCAGAACTCTCCAGTAGGAATGGAGAAA...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCCTATTCTTCCAGTGGTaGAGTAATGTGCTCAACTGT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIILFFQW*SNVLNC
Trigger: ACAGTTGAGCACATTACTTCACCACTGGAAGAATAG...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCTTCCTAAGGTTTGTCTaGAGTCACCTTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIFLRFV*SHLPSS
Trigger: AGAAGAAGGAAGGTGACTGCAGACAAACCTTAGGAA...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAACTCTACTCGAGTTTaGTTTCTCATTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRNSTRV*FLIPSR
Trigger: TCTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCAATTATCCCAAGTGTaGTCTCCACCTTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFQLSQV*SPPWKQ
Trigger: TTGCTTCCAAGGTGGAGAGCACACTTGGGATAATTG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTACACTTGTAAACATTaGCAGCCACTAGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLYTCKH*QPLGKD
Trigger: GTCTTTGCCTAGTGGCTGGCAATGTTTACAAGTGTA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAATATTCCTACGTAAGTaGAAAGCATGGATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRIFLRK*KAWMKR
Trigger: TCTTTTCATCCATGCTTTGCACTTACGTAGGAATAT...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCTTCACAGCAATAATTaGTGGAAGGTGCTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGLHSNN*WKVLVF
Trigger: AAACACAAGCACCTTCCACCAATTATTGCTGTGAAG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTTGCTGCTGTGTCTCTaGAGTACAAGATGTCATATG +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFLLLCL*STRCHM
Trigger: CATATGACATCTTGTACTTCAGAGACACAGCAGCAA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCGGAAAACTGCAGTCTaGATTGACTATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGRKTAV*IDYSFK
Trigger: TTTGAAAGAATAGTCAATGCAGACTGCAGTTTTCCG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGCGTAAGTGCAAAGCATaGATGAAAAGAATCATACAG +
Preference number: 4 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRRKCKA*MKRIIQ
Trigger: CTGTATGATTCTTTTCATCCATGCTTTGCACTTACG...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
3UTR CAA 72 bp AGAGAGCAGCTTCTCTATCAACCATTCTCAGAAAAATaGGAACCTGGAGATACATTCGTCTTGTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: REQLLYQPFSEK*EPGDTFVLSNS
Trigger: AGAGTTGGACAAGACGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGGTTGATAGAGAAGCTGCTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.3
ENST00000637017.1
CDS-3UTR TCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCAATTCTTTGTCCAGATaGAGGTCTCCCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLNSLSR*RSPWQE
Trigger: CTCTTGCCAGGGAGACCTTCATCTGGACAAAGAATT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR TCA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTTATGGGAAGAACAACTaGAGTGAGGAAAAATACACA +
Preference number: 4 (lower is better)
Translates to: GEYLQAIESMHFKERAASYGKNN*SEEKYT
Trigger: TGTGTATTTTTCCTCACTTCAGTTGTTCTTCCCATA...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCATTCTCAGAAAAATTaGAACCTGGAGATACATTCG +
Preference number: 4 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLHSQKN*NLEIHS
Trigger: CGAATGTATCTCCAGGTTCCAATTTTTCTGAGAATG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGGGGAATTTTCTCTGTaGAGTTCTGACGTGCACAAT +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLGEFSL*SSDVHN
Trigger: ATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCATAACTATAAAGATCTaGTGCACCAGGCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: IVYLSCQELWSQCTSARFITIKI*CTRQIL
Trigger: CAGAATTTGCCTGGTGCAGCAGATCTTTATAGTTAT...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCATATTTGACCTAGGTTaGGATGTGACAGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLIFDLG*DVTAGN
Trigger: GTTGCCAGCTGTCACATCCCAACCTAGGTCAAATAT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCATAATTGGTGGAAGGTaGTTGTGTTTCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLIIGGR*LCFSSS
Trigger: TGAGGAACTGAAACACAAGCACCTTCCACCAATTAT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR GCA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCAAATTCTGTGCAAAATaGAAATTTCTGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLKFCAK*KFLCWG
Trigger: TCCCCAGCACAGAAATTTGCATTTTGCACAGAATTT...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp CCGCAGCCGGCCCTCGGGGGCCTTGGCATCCCAGGGCTTCTCCGCTaGCGTCGCCTGCTGCCGCTGCAGGGCGCACGGCTTCCCGGCGGT +
Preference number: 5 (lower is better)
Translates to: PQPALGGLGIPGLLR*RRLLPLQGARLPGG
Trigger: ACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGATGCCAAGGCCCCCGAGGGCCGGCTGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CCCTCGGGGGCCTTGGCATCCCAGGGCTTCTCCGCTGCCGTCGCCTaGTGCCGCTGCAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTC +
Preference number: 5 (lower is better)
Translates to: PSGALASQGFSAAVA*CRCRAHGFPAVGDF
Trigger: GAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGATGCCAAGGCCCCCGAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GGGCCGCCCTCCCCCTCGGACTCGGCGCTGTGCTCCGAAAGGCTGTaGAGGGGGCTGCAGGGCGCATGCGGCTGCTCCGCGCTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GPPSPSDSALCSERL*RGLQGACGCSALSE
Trigger: CTCCGACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCGAGGGGGAGGGCGGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp TCGGGGGCCTTGGCATCCCAGGGCTTCTCCGCTGCCGTCGCCTGCTaGCGCTGCAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: SGALASQGFSAAVAC*RCRAHGFPAVGDFC
Trigger: GCAGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGATGCCAAGGCCCCCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GCCTTGGCATCCCAGGGCTTCTCCGCTGCCGTCGCCTGCTGCCGCTaGAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTCTGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: ALASQGFSAAVACCR*RAHGFPAVGDFCSG
Trigger: GCCAGAGCAGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGATGCCAAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CCCCCTCGGACTCGGCGCTGTGCTCCGAAAGGCTGTGCAGGGGGCTaGAGGGCGCATGCGGCTGCTCCGCGCTGTCGGAGCGCGACAGGT +
Preference number: 5 (lower is better)
Translates to: PPRTRRCAPKGCAGG*RAHAAAPRCRSATG
Trigger: ACCTGTCGCGCTCCGACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCGAGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CGCGACCACAGTGCGGACACAGGTACTTGCCCGCATTCCGCACCTTaGCTGGGCTGCCCAGCGTGGGGCCCAGGCCCGGCGACAGGACAG +
Preference number: 5 (lower is better)
Translates to: RDHSADTGTCPHSAP*LGCPAWGPGPATGQ
Trigger: CTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CTGTGCTCCGAAAGGCTGTGCAGGGGGCTGCAGGGCGCATGCGGCTaGTCCGCGCTGTCGGAGCGCGACAGGTACCCCGAGTCGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LCSERLCRGLQGACG*SALSERDRYPESVL
Trigger: GAGCACCGACTCGGGGTACCTGTCGCGCTCCGACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp GTCTGTGTCCTCTGCGGGCACCAGGGCATCGCCAATGGGGGTGCCTaGCAGGTCCTCCACCGCGGCCTGTCTGACCAGGGCCCGGGGATG +
Preference number: 5 (lower is better)
Translates to: VCVLCGHQGIANGGA*QVLHRGLSDQGPGM
Trigger: CATCCCCGGGCCCTGGTCAGACAGGCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp AGTGCGGACACAGGTACTTGCCCGCATTCCGCACCTTGCCTGGGCTaGCCAGCGTGGGGCCCAGGCCCGGCGACAGGACAGGCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: SADTGTCPHSAPCLG*PAWGPGPATGQAEC
Trigger: GCACTCTGCCTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp TGCTGCCGCTGCAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTCTaGTCTGGCAACTTACGCCAGGGTTGTGTGCTGGCCGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CCRCRAHGFPAVGDF*SGNLRQGCVLAAGS
Trigger: GCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGCAGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CGGCGGTCGGCGACTTCTGCTCTGGCAACTTACGCCAGGGTTGTGTaGTGGCCGCTGGGAGCCCAGGTGACGCCATGGGGGCAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: RRSATSALATYARVV*WPLGAQVTPWGQSP
Trigger: GGGACTCTGCCCCCATGGCGTCACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGCAGAAGTCGCCGACCGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp ACAGGTACTTGCCCGCATTCCGCACCTTGCCTGGGCTGCCCAGCGTaGGGCCCAGGCCCGGCGACAGGACAGGCAGAGTGCCCACGATGT +
Preference number: 5 (lower is better)
Translates to: TGTCPHSAPCLGCPA*GPGPATGQAECPRC
Trigger: ACATCGTGGGCACTCTGCCTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp GGCCGCCCCCGGCGCCCTCGGACTCTGAGGACAGCCGGGAGTTGTTaGGGTGCGTCTGCGTCCGCCTGTGCTTGTAGAGATTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GRPRRPRTLRTAGSC*GASASACACRDCSG
Trigger: CCCAGAGCAATCTCTACAAGCACAGGCGGACGCAGACGCACCTCAACAACTCCCGGCTGTCCTCAGAGTCCGAGGGCGCCGGGGGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CACTGGGCTTCAGGCAGTCGCGACCACAGTGCGGACACAGGTACTTaGCCGCATTCCGCACCTTGCCTGGGCTGCCCAGCGTGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: HWASGSRDHSADTGT*PHSAPCLGCPAWGP
Trigger: TGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GGCCATGGCCTCCCGCGCAGCAGTTCTCTTTGCGTCTGTGTCCTCTaGGGGCACCAGGGCATCGCCAATGGGGGTGCCTGGCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: GHGLPRSSSLCVCVL*GHQGIANGGAWQVL
Trigger: GAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CGCTCTGCCCTTGCCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTTaGGTCTGTGTCCTCTGCGGGCACCAGGGCATCGCCAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: RSALAGHGLPRSSSL*VCVLCGHQGIANGG
Trigger: ACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp ATGCCTTGTCCTGTGGGGGAGGCAGCGGAACCCAGGGCTCCTCTCTaGGGCTCAGCAATGCCCTGCCTCGGGGAGGCACGCACTCCGCTT +
Preference number: 5 (lower is better)
Translates to: MPCPVGEAAEPRAPL*GSAMPCLGEARTPL
Trigger: AAGCGGAGTGCGTGCCTCCCCGAGGCAGGGCATTGCTGAGCCCCAGAGAGGAGCCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp GCACTCTCCTTTGAGCCCCCTGGCACCTCCCCGGGATCGGCATCCTaGTTCTGGGATGACAAAGAGGCAGGCTGCGTGGGCCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: ALSFEPPGTSPGSAS*FWDDKEAGCVGPPG
Trigger: CCCAGGTGGGCCCACGCAGCCTGCCTCTTTGTCATCCCAGAAGCAGGATGCCGATCCCGGGGAGGTGCCAGGGGGCTCAAAGGAGAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GAGGCAGCGGAACCCAGGGCTCCTCTCTGGGGCTCAGCAATGCCCTaGCTCGGGGAGGCACGCACTCCGCTTTCCACTGAAGCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: EAAEPRAPLWGSAMP*LGEARTPLSTEAGS
Trigger: GGAACCAGCTTCAGTGGAAAGCGGAGTGCGTGCCTCCCCGAGGCAGGGCATTGCTGAGCCCCAGAGAGGAGCCCTGGGTTCCGCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 90 bp CGGTCGGCGACTTCTGCTCTGGCAACTTACGCCAGGGTTGTGTGCTaGCCGCTGGGAGCCCAGGTGACGCCATGGGGGCAGAGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RSATSALATYARVVC*PLGAQVTPWGQSPK
Trigger: CTTGGGACTCTGCCCCCATGGCGTCACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGCAGAAGTCGCCGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp TCCAGCTGGGCATCGTCCACCACCGCCTGGTTGTGGGAGATGAGCTaGGCGATGCGCTCCTCCAGCCGCTTCTTCTCCAGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SSWASSTTAWLWEMS*AMRSSSRFFSSSRP
Trigger: CGGCCTGGAGCTGGAGAAGAAGCGGCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGACGATGCCCAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp TCTGCTCCGCGGGCAGAGGGACACTGCGGCTCAGGCAACACCACGTaGGCCGCGGCTCAGCCTTCAGTGAGGGAAAGGGGTTTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SAPRAEGHCGSGNTT*AAAQPSVRERGFGC
Trigger: GCACCCAAAACCCCTTTCCCTCACTGAAGGCTGAGCCGCGGCTCACGTGGTGTTGCCTGAGCCGCAGTGTCCCTCTGCCCGCGGAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp TCTTCAGCCTTCTCTGGCCGCACTTCCTGCCGCCCGCTCTGCCCTTaGCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTTGCGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSAFSGRTSCRPLCP*RPWPPAQQFSLRLC
Trigger: ACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGAGAAGGCTGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GCGCCGGCCCTCCTTCTCCAGGGCTTGTCCAGGTCCATCCTCCATTaGTCCCAGGAGGGCCATTGGGACCCTCATCTCGGAGGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: APALLLQGLSRSILH*SQEGHWDPHLGGCY
Trigger: GTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGACAAGCCCTGGAGAAGGAGGGCCGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp CCGTACACCTGCCACTTCTCCTGGGAGAACATCTTCAGCCTTCTCTaGCCGCACTTCCTGCCGCCCGCTCTGCCCTTGCCGGCCATGGCC +
Preference number: 5 (lower is better)
Translates to: PYTCHFSWENIFSLL*PHFLPPALPLPAMA
Trigger: GGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGAGAAGGCTGAAGATGTTCTCCCAGGAGAAGTGGCAGGTGTACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp TGGCAACTTACGCCAGGGTTGTGTGCTGGCCGCTGGGAGCCCAGGTaGCGCCATGGGGGCAGAGTCCCAAGGAGCCTCTCTGTCGGCAAA +
Preference number: 5 (lower is better)
Translates to: WQLTPGLCAGRWEPR*RHGGRVPRSLSVGK
Trigger: TTTGCCGACAGAGAGGCTCCTTGGGACTCTGCCCCCATGGCGTCACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp CGTTGTCCAGCTGGGCATCGTCCACCACCGCCTGGTTGTGGGAGATaGGCTGGGCGATGCGCTCCTCCAGCCGCTTCTTCTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RCPAGHRPPPPGCGR*AGRCAPPAASSPAP
Trigger: TGGAGCTGGAGAAGAAGCGGCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGACGATGCCCAGCTGGACAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp AGAACATCTTCAGCCTTCTCTGGCCGCACTTCCTGCCGCCCGCTCTaGCCTTGCCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTTGCGT +
Preference number: 5 (lower is better)
Translates to: RTSSAFSGRTSCRPL*PCRPWPPAQQFSLR
Trigger: ACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGAGAAGGCTGAAGATGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CCAGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTTGCCTTCTaGTCCGCGGGCAGAGGGACACTGCGGCTCAGGCAACACCACGTG +
Preference number: 5 (lower is better)
Translates to: PGKCTAKYTDAAFAF*SAGRGTLRLRQHHV
Trigger: CACGTGGTGTTGCCTGAGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp GGCAGGCTGCGTGGGCCCACCTGGGGTCTCTGCGCTCACAGGCTCTaGTTGCTTCCAGCTGTGCAGGTCCTCCACTTTCAGCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GRLRGPTWGLCAHRL*LLPAVQVLHFQLLP
Trigger: AGGAAGAAGCTGAAAGTGGAGGACCTGCACAGCTGGAAGCAACCAGAGCCTGTGAGCGCAGAGACCCCAGGTGGGCCCACGCAGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GCTGCTACCAGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTTaGCTTCTGCTCCGCGGGCAGAGGGACACTGCGGCTCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: AATRKVHRQVHRCRL*LLLRGQRDTAAQAT
Trigger: TGTTGCCTGAGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp ATCTCGGAGGCTGCTACCAGGAAAGTGCACCGCCAAGTACACAGATaGCGCCTTTGCCTTCTGCTCCGCGGGCAGAGGGACACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: ISEAATRKVHRQVHR*RLCLLLRGQRDTAA
Trigger: AGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GGAGGGCCATTGGGACCCTCATCTCGGAGGCTGCTACCAGGAAAGTaGACCGCCAAGTACACAGATGCCGCCTTTGCCTTCTGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GGPLGPSSRRLLPGK*TAKYTDAAFAFCSA
Trigger: CGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp GGGGGCAGAGTCCCAAGGAGCCTCTCTGTCGGCAAATGCGGACCCTaGACAGGGAGCAGCTTCGGTCCTCACATCCAGGTTCTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: GGRVPRSLSVGKCGP*TGSSFGPHIQVLGK
Trigger: CTTGCCAAGAACCTGGATGTGAGGACCGAAGCTGCTCCCTGTCCAGGGTCCGCATTTGCCGACAGAGAGGCTCCTTGGGACTCTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp CAGGGCTTGTCCAGGTCCATCCTCCATTGCTCCCAGGAGGGCCATTaGGACCCTCATCTCGGAGGCTGCTACCAGGAAAGTGCACCGCCA +
Preference number: 5 (lower is better)
Translates to: QGLSRSILHCSQEGH*DPHLGGCYQESAPP
Trigger: TGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGACAAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp TGCCCAGGGGTCCTGCATGGCTTCAGTCCCTCAAGTGCGGGAGGGTaGCGGCTTCTTCTTCGCACCCAGGTTGGTGTGCGAAGTCTACTG +
Preference number: 5 (lower is better)
Translates to: CPGVLHGFSPSSAGG*RLLLRTQVGVRSLL
Trigger: CAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAGCCATGCAGGACCCCTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp GTCCTCATGGACAGGGGTCCTCCTGTCTTGGGTGGGGACTGTGCCTaGGCTCCCTGCTGCCTCTTTCTGCAGAGGAAAGCCCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: VLMDRGPPVLGGDCA*APCCLFLQRKAQFC
Trigger: GCAGAACTGGGCTTTCCTCTGCAGAAAGAGGCAGCAGGGAGCTCAGGCACAGTCCCCACCCAAGACAGGAGGACCCCTGTCCATGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGACGAAGGGCAGCGAGTaGCTCCTGGTGACGGGGACA +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGTKGSE*LLVTGT
Trigger: TGTCCCCGTCACCAGGAGCAACTCGCTGCCCTTCGT...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp CCCATGCAGAGGCGATGGATACGGTGGCTGTCACCCTCCATGTCCTaGACTAAGTGTGCCTCACACGTTGGAGTGGGCGGGGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: PMQRRWIRWLSPSMS*TKCASHVGVGGEEV
Trigger: TACCTCCTCCCCGCCCACTCCAACGTGTGAGGCACACTTAGTTCAGGACATGGAGGGTGACAGCCACCGTATCCATCGCCTCTGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp GTCCTGACCCAACAAATGATGCCCGTTCTTCAGGCCACCCACTGCTaGAGAGAGAGTCCTGGCTGTGCCTTGGTCCCCAGGGAATGGGCA +
Preference number: 5 (lower is better)
Translates to: VLTQQMMPVLQATHC*RESPGCALVPREWA
Trigger: TGCCCATTCCCTGGGGACCAAGGCACAGCCAGGACTCTCTCTGCAGCAGTGGGTGGCCTGAAGAACGGGCATCATTTGTTGGGTCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CTCCATTGCTCCCAGGAGGGCCATTGGGACCCTCATCTCGGAGGCTaGTACCAGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LHCSQEGHWDPHLGG*YQESAPPSTQMPPL
Trigger: CAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCAGTATGAAGGGCACGTaGCCCCCATCTAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPSMKGT*PPSRLP
Trigger: GGGCAGCCTAGATGGGGGCAACGTGCCCTTCATACT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp GCAGATTCAGACCTGCTATTTCTGAAGAGGTCTGCCCAGGGGTCCTaGATGGCTTCAGTCCCTCAAGTGCGGGAGGGTGGCGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ADSDLLFLKRSAQGS*MASVPQVREGGGFF
Trigger: GAAGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAGCCATGCAGGACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTCTGAATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp TCCCTCAAGTGCGGGAGGGTGGCGGCTTCTTCTTCGCACCCAGGTTaGTGTGCGAAGTCTACTGGCTCTCAGCTGAACACAGCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SLKCGRVAASSSHPG*CAKSTGSQLNTALQ
Trigger: TTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp AGCACAGTCTATATTCCAATGCAGGTGCTGTCATGCCTTGTCCTGTaGGGGAGGCAGCGGAACCCAGGGCTCCTCTCTGGGGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: STVYIPMQVLSCLVL*GRQRNPGLLSGAQQ
Trigger: TTGCTGAGCCCCAGAGAGGAGCCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAATCTACATCACCCCCTTaGAGGGGGCCAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GNAAAELGVRSWLELACKSTSPP*RGPGAG
Trigger: CCCAGCACCTGGCCCCCTCAAAGGGGGTGATGTAGA...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACAGAGAGCCTGGCCCTaGCCAAAGTGCTGCCCATGC +
Preference number: 5 (lower is better)
Translates to: GNAAAELGVRSWLELACKQRAWP*PKCCPC
Trigger: GCATGGGCAGCACTTTGGCAAGGGCCAGGCTCTCTG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCTCCCACGAGACATCTTaGCCCTCCAAGGCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPSHETS*PSKAGL
Trigger: AAGGCCTGCCTTGGAGGGCAAAGATGTCTCGTGGGA...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCAACGCTGCGGCTGAGTaGGGGGTCAGAAGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPNAAAE*GVRSWL
Trigger: CAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp CTCTCATTGGCCATGCCCCTCTGGTCTTGCACCATCAGACACACATaGCAGTCCAGAAGCTGTGGTCAGGAGGAGCAGGGACACCCTTCA +
Preference number: 5 (lower is better)
Translates to: LSLAMPLWSCTIRHT*QSRSCGQEEQGHPS
Trigger: TGAAGGGTGTCCCTGCTCCTCCTGACCACAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 90 bp TCGGGGAGGCACGCACTCCGCTTTCCACTGAAGCTGGTTCCCTCTTaGGGTTTGGTTCCCCTAACATCCACCGCATGCTCTCTCCATTGT +
Preference number: 5 (lower is better)
Translates to: SGRHALRFPLKLVPS*GLVPLTSTACSLHC
Trigger: ACAATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAGTGCGTGCCTCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAATGCGGACACAGGTACTaGCCCGCATTCCGCACCTTG +
Preference number: 5 (lower is better)
Translates to: GNAAAELGVRSWLELACKCGHRY*PAFRTL
Trigger: CAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCA...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCTCGATGCTGCCCTGTTaGGACAGCCCGGTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: VKAQSLCTLTICRVCFLASMLPC*DSPVFR
Trigger: CCGGAAGACCGGGCTGTCCAAACAGGGCAGCATCGA...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCCTGCCTGGCACCATTaGAAGATGAGCAGAGCACTC +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGPAWHH*KMSRAL
Trigger: GAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGAATGGAGAAAGCCAGTaGCCTCGACTGTGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGNGESQ*PRLCGV
Trigger: GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATT...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp ATGAAGGTCTCCCTGGCAAGAGGGTCTGTGCTCTGCCCTCTTCTGTaGCTTTGCTGTCTGGGGAGCTTGATGTCAGAGTCCTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MKVSLARGSVLCPLL*LCCLGSLMSESSLQ
Trigger: CTGCAGGGAGGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAGACCCTCTTGCCAGGGAGACCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 90 bp TTCCTGTGGATCCGTCCATTCTCTGGTCTGTGGAGCTTGGTGTCGTaGGCGACTGTAGGAATGTTCGTCTCTGCCTTGGCTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FLWIRPFSGLWSLVS*ATVGMFVSALAVPG
Trigger: GCCAGGCACAGCCAAGGCAGAGACGAACATTCCTACAGTCGCTCACGACACCAAGCTCCACAGACCAGAGAATGGACGGATCCACAGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp CAAGTGCGGGAGGGTGGCGGCTTCTTCTTCGCACCCAGGTTGGTGTaGGAAGTCTACTGGCTCTCAGCTGAACACAGCTCTGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QVREGGGFFFAPRLV*EVYWLSAEHSSARN
Trigger: ATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CAAAGGCTCCAAAGCACAGTCTATATTCCAATGCAGGTGCTGTCATaGCTTGTCCTGTGGGGGAGGCAGCGGAACCCAGGGCTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QRLQSTVYIPMQVLS*LVLWGRQRNPGLLS
Trigger: AGAGAGGAGCCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGCTTTGGAGCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp TCTGTGGAGCTTGGTGTCGTGAGCGACTGTAGGAATGTTCGTCTCTaGCTTGGCTGTGCCTGGCCTCACAATGGAACCCAGCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: SVELGVVSDCRNVRL*LGCAWPHNGTQHPA
Trigger: TGCTGGATGCTGGGTTCCATTGTGAGGCCAGGCACAGCCAAGGCAGAGACGAACATTCCTACAGTCGCTCACGACACCAAGCTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 90 bp GAGGGGCAGGGCAGGTGGGTTCTGGAACCTCCATTCCGCATCATCTaGATGGCCCACAATGCTGGAAAACTTGCCAAGAGCAAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: EGQGRWVLEPPFRII*MAHNAGKLAKSKPH
Trigger: ATGAGGCTTGCTCTTGGCAAGTTTTCCAGCATTGTGGGCCATCCAGATGATGCGGAATGGAGGTTCCAGAACCCACCTGCCCTGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCCCGCATTCCGCACCTaGCCTGGGCTGCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGPAFRT*PGLPSV
Trigger: CACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGACAGCCGGGAGTTGTaGAGGTGCGTCTGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRDSREL*RCVCVR
Trigger: GCGGACGCAGACGCACCTCAACAACTCCCGGCTGTC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGCACCTCCTTCCAGCTaGGGGTCCGGCCAAACTGGC +
Preference number: 5 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPAPPSS*GSGQTG
Trigger: GCCAGTTTGGCCGGACCCCAAGCTGGAAGGAGGTGC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGCCTGGCACTCTCCTTaGAGCCCCCTGGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQAWHSP*SPLAPP
Trigger: GGGAGGTGCCAGGGGGCTCAAAGGAGAGTGCCAGGC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp GTGGAAGCTGATGCCAAAGGCTCCAAAGCACAGTCTATATTCCAATaGAGGTGCTGTCATGCCTTGTCCTGTGGGGGAGGCAGCGGAACC +
Preference number: 5 (lower is better)
Translates to: VEADAKGSKAQSIFQ*RCCHALSCGGGSGT
Trigger: GGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGCTTTGGAGCCTTTGGCATCAGCTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTGGGGGCTCTCCGGCCTaGTCCCCTTCCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GEYLQAIESMHFKERAASGGSPA*SPSSRR
Trigger: CCTCCTGGAGGAAGGGGACAAGGCCGGAGAGCCCCC...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATATCCACCACCGCCTGGTaGTGGGAGATGAGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTISTTAW*WEMSWA
Trigger: CGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGA...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCACCCAAGGCTCTGGCGTaGCCCCTGCGGATATGTCCT +
Preference number: 5 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPPKALA*PLRICP
Trigger: AGGACATATCCGCAGGGGCAACGCCAGAGCCTTGGG...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGTTCCAGCCTCCCATTaGGAGAGACCAGGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVVPASH*ERPGGS
Trigger: GGAGCCCCCTGGTCTCTCCAAATGGGAGGCTGGAAC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCATCCTCTTCTGGGAATaGAACTCATGGCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPILFWE*NSWPQE
Trigger: CTCTTGGGGCCATGAGTTCAATTCCCAGAAGAGGAT...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGCAGGAAACTCGGCCTaGGGGAGCCAACGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQAGNSA*GSQRSL
Trigger: GAGGCTGCGTTGGCTCCCCAAGGCCGAGTTTCCTGC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp TATGGTTTGGGATCTGTTGAGACTGAATCCTGGGAGGCCAGCAGCTaGGTCTCCAGCAACCCAAGGTCAAGACCTTTGCCAGGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: YGLGSVETESWEASS*VSSNPRSRPLPGGR
Trigger: TCTACCCCCTGGCAAAGGTCTTGACCTTGGGTTGCTGGAGACTCAGCTGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp GGTGGCGGCTTCTTCTTCGCACCCAGGTTGGTGTGCGAAGTCTACTaGCTCTCAGCTGAACACAGCTCTGCAAGAAATTCCCTTTGTACC +
Preference number: 5 (lower is better)
Translates to: GGGFFFAPRLVCEVY*LSAEHSSARNSLCT
Trigger: GGTACAAAGGGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp AAATTAGCTGGACAGCTGGGTCTGATTGCTTTTGGTTACTGGGCTTaGGGCCACCAGGGAAACAGGCTTCCCAAAGCCCCTTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: KLAGQLGLIAFGYWA*GHQGNRLPKAPWME
Trigger: CTCCATCCAAGGGGCTTTGGGAAGCCTGTTTCCCTGGTGGCCCCAAGCCCAGTAACCAAAAGCAATCAGACCCAGCTGTCCAGCTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CCA 90 bp GCACCTGACAGCCTGTCTTTCGTTCCTGTGGATCCGTCCATTCTCTaGTCTGTGGAGCTTGGTGTCGTGAGCGACTGTAGGAATGTTCGT +
Preference number: 5 (lower is better)
Translates to: APDSLSFVPVDPSIL*SVELGVVSDCRNVR
Trigger: ACGAACATTCCTACAGTCGCTCACGACACCAAGCTCCACAGACCAGAGAATGGACGGATCCACAGGAACGAAAGACAGGCTGTCAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCAAGAGGGGCCGAGACTaGTCTGGGGGCGTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGKRGRD*SGGVQV
Trigger: CACCTGGACGCCCCCAGACAAGTCTCGGCCCCTCTT...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAACACAGATGCCGCCTTaGCCTTCTGCTCCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTITQMPP*PSAPRA
Trigger: TGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGT...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGACAAGATGGCTCCTCTaGCAGATTCAGACCTGCTAT +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGTRWLL*QIQTCY
Trigger: ATAGCAGGTCTGAATCTGCAAGAGGAGCCATCTTGT...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGCACACCCCCGTCTCTTaGTCAAGCTACTCCAATTAT +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGHTPVS*SSYSNY
Trigger: ATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTG...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CCATGTCTGCCCTGCCTGGCACCATTTGAAGATGAGCAGAGCACTCCCAAGGGGTTAGCTGGGGTTGTTTaGGTGAGACAGGATGTTCAC +
Preference number: 5 (lower is better)
Translates to: PCLPCLAPFEDEQSTPKGLAGVV*VRQDVH
Trigger: GTGAACATCCTGTCTCACCAAAACAACCCCAGCTAA...CCCCTTGGGAGTGCTCTGCTCATCTTCAAATGGTGCCAGGCAGGGCAGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp CGGGTAGAAAGAATAACTCTCTCATTGGCCATGCCCCTCTGGTCTTaGACCATCAGACACACATGCCAGTCCAGAAGCTGTGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: RVERITLSLAMPLWS*TIRHTCQSRSCGQE
Trigger: CTCCTGACCACAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTTTCTACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCAACTTACGCCAGGGTaGTGTGCTGGCCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGQLTPG*CAGRWE
Trigger: CTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGCGCAGCAGTTCTCTTaGCGTCTGTGTCCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQAQQFS*RLCPLR
Trigger: CCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTCCCCCAGCTCCCAGTaGGGTACCCAGGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRSPSSQ*GTQGFR
Trigger: CCTGAATCCCTGGGTACCCAACTGGGAGCTGGGGGA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAACCAAGGTCAAGACCTTaGCCAGGGGGTAGAGGCACG +
Preference number: 5 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQPRSRP*PGGRGT
Trigger: CGTGCCTCTACCCCCTGGCAAAGGTCTTGACCTTGG...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGCAGAGTTTGCTTCCTaGCCATGTCTGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVAEFAS*PCLPCL
Trigger: CAGGCAGGGCAGACATGGCAAGGAAGCAAACTCTGC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAACTGTGTGGGGTCCACTaGTGGAGAAATGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: GNAAAELGVRSWLELACKLCGVH*WRNVLM
Trigger: CATCAACACATTTCTCCACAAGTGGACCCCACACAG...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 90 bp GACTCACGGGTAGAAAGAATAACTCTCTCATTGGCCATGCCCCTCTaGTCTTGCACCATCAGACACACATGCCAGTCCAGAAGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: DSRVERITLSLAMPL*SCTIRHTCQSRSCG
Trigger: ACCACAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTTTCTACCCGTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCTTCTTCGCACCCAGGTaGGTGTGCGAAGTCTACTGG +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVFFAPR*VCEVYW
Trigger: CCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAA...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCCCCACCCAAACTTCTaGCATGCAAGGCCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGPHPNF*HARPPW
Trigger: CCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGTTCCCTCTTGGGGTTaGGTTCCCCTAACATCCACC +
Preference number: 5 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRVPSWG*VPLTST
Trigger: GGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAAC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCGAAGCTGGTTCCCTCTaGGGGTTTGGTTCCCCTAAC +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVEAGSL*GFGSPN
Trigger: GTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTC...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCATGCCCCTCTGGTCTaGCACCATCAGACACACATG +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVHAPLV*HHQTHM
Trigger: CATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp TGCTTGCCTGATAGAATCACTCGGGAGGCAACAGACCAGGCTCAATaGTTAAGATCCCTTCATCTGGCCTTGCATCCCAGAACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: CLPDRITREATDQAQ*LRSLHLALHPRTPG
Trigger: ACCTGGAGTTCTGGGATGCAAGGCCAGATGAAGGGATCTTAATCATTGAGCCTGGTCTGTTGCCTCCCGAGTGATTCTATCAGGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS TCA 90 bp CTGAACTTGCTGGAGAGACCACAGACTTACGCACCAGGTGGAAGCTaGTGCCAAAGGCTCCAAAGCACAGTCTATATTCCAATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LNLLERPQTYAPGGS*CQRLQSTVYIPMQV
Trigger: CACCTGCATTGGAATATAGACTGTGCTTTGGAGCCTTTGGCATCAGCTTCCACCTGGTGCGTAAGTCTGTGGTCTCTCCAGCAAGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp TCTCAAGGGGACCTGAGTGGGGCTCGTGTCAGAGATAACTGCGTGTaGTTGGAAGGAATCATCCATCATGCTTGCCTGATAGAATCACTC +
Preference number: 5 (lower is better)
Translates to: SQGDLSGARVRDNCV*LEGIIHHACLIESL
Trigger: GAGTGATTCTATCAGGCAAGCATGATGGATGATTCCTTCCAAGCACACGCAGTTATCTCTGACACGAGCCCCACTCAGGTCCCCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCCTCACATCCAGGTTCTaGGCAAGTAGGGGCACGTGG +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGLTSRF*ASRGTW
Trigger: CCACGTGCCCCTACTTGCCAAGAACCTGGATGTGAG...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCCCTCTTCTGTGACTTaGCTGTCTGGGGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVPSSVT*LSGELD
Trigger: ATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGG...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACTGTCCCCACCCAAACTTCTTGCATGCAAGGCCTCCGTGGCAATGGTTCCCCGTAAATCCTGAACAGTaGACCGCATATACAAGACAT +
Preference number: 5 (lower is better)
Translates to: HCPHPNFLHARPPWQWFPVNPEQ*TAYTRH
Trigger: ATGTCTTGTATATGCGGTCAACTGTTCAGGATTTAC...GGGGAACCATTGCCACGGAGGCCTTGCATGCAAGAAGTTTGGGTGGGGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp CTTCTTCGCACCCAGGTTGGTGTGCGAAGTCTACTGGCTCTCAGCTaGACACAGCTCTGCAAGAAATTCCCTTTGTACCTTTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: LLRTQVGVRSLLALS*TQLCKKFPLYLLGL
Trigger: CAACCCTAAAAGGTACAAAGGGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp ACCCAAAGGAAGAAGGCCTTTGAGCATCTGAGAAGATGTATGGTTTaGGATCTGTTGAGACTGAATCCTGGGAGGCCAGCAGCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: TQRKKAFEHLRRCMV*DLLRLNPGRPAAES
Trigger: AGACTCAGCTGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAAAGGCCTTCTTCCTTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 90 bp CACTTCCCTGAACTTGCTGGAGAGACCACAGACTTACGCACCAGGTaGAAGCTGATGCCAAAGGCTCCAAAGCACAGTCTATATTCCAAT +
Preference number: 5 (lower is better)
Translates to: HFPELAGETTDLRTR*KLMPKAPKHSLYSN
Trigger: ATTGGAATATAGACTGTGCTTTGGAGCCTTTGGCATCAGCTTCCACCTGGTGCGTAAGTCTGTGGTCTCTCCAGCAAGTTCAGGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGATGGTTTGGGATCTGTaGAGACTGAATCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMMVWDL*RLNPGR
Trigger: CCTCCCAGGATTCAGTCTCAACAGATCCCAAACCAT...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAATTATCCCAGACCATTTGCAGAGTTaGCTTCCTTGCCATGTCTGC +
Preference number: 5 (lower is better)
Translates to: LCAQFTPPSLCQATPIIPDHLQS*LPCHVC
Trigger: GCAGACATGGCAAGGAAGCAAACTCTGCAAATGGTC...TGGGATAATTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGAACGCTGCGGCTGAGTTGGGGGTCAGAAGTTGGTTGGAGTTGGCTTGTAAAGGAGATACATTCGTCTaGTCCAACTCTCTTATTCTC +
Preference number: 5 (lower is better)
Translates to: GNAAAELGVRSWLELACKGDTFV*SNSLIL
Trigger: GAGAATAAGAGAGTTGGACAAGACGAATGTATCTCC...TTTACAAGCCAACTCCAACCAACTTCTGACCCCCAACTCAGCCGCAGCGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GTCAAGGCCCAGTCACTGTGCACGTTGACCATTTGCAGAGTTTGCTTCCTTGCCCATTGTCAGAAGAGGTaGATCATCACCAGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: VKAQSLCTLTICRVCFLAHCQKR*IITSPL
Trigger: TAAAGGGCTGGTGATGATCAACCTCTTCTGACAATG...GGCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCACAGTGACTGGGCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCGGACACCCTTCACCTTaGCAGTTCAGTCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: IVYLSCQELWSQCTSARFGHPSP*QFSPWA
Trigger: GGCCCAGGGACTGAACTGCAAAGGTGAAGGGTGTCC...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp GGCAGCCTCCTGTGGCTTGGCCTTTATGTCAAGTCCACGTTTAACTaGGAAAAGCACCATTTCAAGCAACCTGGAAGAGACTCAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GSLLWLGLYVKSTFN*EKHHFKQPGRDSSR
Trigger: TCTGCTTGAGTCTCTTCCAGGTTGCTTGAAATGGTGCTTTTCTCAGTTAAACGTGGACTTGACATAAAGGCCAAGCCACAGGAGGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS GCA 90 bp GTCAGAGATAACTGCGTGTGCTTGGAAGGAATCATCCATCATGCTTaGCTGATAGAATCACTCGGGAGGCAACAGACCAGGCTCAATGAT +
Preference number: 5 (lower is better)
Translates to: VRDNCVCLEGIIHHA*LIESLGRQQTRLND
Trigger: ATCATTGAGCCTGGTCTGTTGCCTCCCGAGTGATTCTATCAGGCAAGCATGATGGATGATTCCTTCCAAGCACACGCAGTTATCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CCA 90 bp CTTCCTTCTTCTCTTCCTTCCCACAACAAGGAGGTGATTCTGAGGTaGCACAAGATGGCTCCTCTTGCAGATTCAGACCTGCTATTTCTG +
Preference number: 5 (lower is better)
Translates to: LPSSLPSHNKEVILR*HKMAPLADSDLLFL
Trigger: CAGAAATAGCAGGTCTGAATCTGCAAGAGGAGCCATCTTGTGCCACCTCAGAATCACCTCCTTGTTGTGGGAAGGAAGAGAAGAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGATTGTGTCTCCCTTCCTaGTGGTGTGAACTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRLCLPS*WCELAE
Trigger: TTCAGCTAGTTCACACCACAAGGAAGGGAGACACAA...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGTCACTGTGCACGTaGACCATTTGCAGAGTTTGC +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIQSLCT*TICRVC
Trigger: GCAAACTCTGCAAATGGTCAACGTGCACAGTGACTG...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAAGTGTGCTCTCCACCTaGGAAGCAAATCCTCAGTTT +
Preference number: 5 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRSVLST*EANPQF
Trigger: AAACTGAGGATTTGCTTCCAAGGTGGAGAGCACACT...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCATTGGTGGAAGGTGCTaGTGTTTCAGTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVIGGRC*CFSSSL
Trigger: CAGTGAGGAACTGAAACACAAGCACCTTCCACCAAT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GCAAATCCTCAGTTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCACCATCATCCTGAAGTaGGTGCTGTTTGGAGCTATG +
Preference number: 5 (lower is better)
Translates to: ANPQFTNGESQLPRLCGVTIILK*VLFGAM
Trigger: CATAGCTCCAAACAGCACCAACTTCAGGATGATGGT...GACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAACTGAGGATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGCGCATGCTCTCTCCATaGTCAGAAGAGGTTGATCAT +
Preference number: 5 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMRMLSP*SEEVDH
Trigger: ATGATCAACCTCTTCTGACAATGGAGAGAGCATGCG...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp CGGTCTTCATCGTCGCTGCTGGTGTCACTGAACTCTACTCGAGTTTaGTTTCTCATTCCTTCCAGACTCCTCTTCTTGAGGGATTTAGAA +
Preference number: 5 (lower is better)
Translates to: RSSSSLLVSLNSTRV*FLIPSRLLFLRDLE
Trigger: TTCTAAATCCCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTTCAGTGACACCAGCAGCGACGATGAAGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp TTTACTAATGGAGAAAGCCAGTTGCCTCGACTGTGTGGGGTCCACTTGTGGAGAGCGTCAACAGTCTTTTaGACCAGACACCATGTTTCT +
Preference number: 5 (lower is better)
Translates to: FTNGESQLPRLCGVHLWRASTVF*TRHHVS
Trigger: AGAAACATGGTGTCTGGTCAAAAAGACTGTTGACGC...TCTCCACAAGTGGACCCCACACAGTCGAGGCAACTGGCTTTCTCCATTAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 90 bp AAGAAATTCCCTTTGTACCTTTTAGGGTTGATCTTCAGTTTTCTCTaGTTGCTGTTCCCACGAGACATCTTTGCCCTCCAAGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: KKFPLYLLGLIFSFL*LLFPRDIFALQGRP
Trigger: AGGCCTGCCTTGGAGGGCAAAGATGTCTCGTGGGAACAGCAAGCAGAGAAAACTGAAGATCAACCCTAAAAGGTACAAAGGGAATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 90 bp CAATTCTTGAACTTGTACCAAGAGAGAGGGTTCCTAAGGTTTGTCTaGAGTCACCTTCCTTCTTCTCTTCCTTCCCACAACAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QFLNLYQERGFLRFV*SHLPSSLPSHNKEV
Trigger: CACCTCCTTGTTGTGGGAAGGAAGAGAAGAAGGAAGGTGACTGCAGACAAACCTTAGGAACCCTCTCTCTTGGTACAAGTTCAAGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGTCCTTCACAGTTCGTTaGTCCATTTCCCTGACAATT +
Preference number: 5 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMSFTVR*SISLTI
Trigger: AATTGTCAGGGAAATGGACAAACGAACTGTGAAGGA...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGAAGTATCTTTGTGCCCAGTTCACACCCCCGTCTCTTTGTCAAGCTACTCCAAGAACTCTACTCGAGTTaGCTTTCTCATTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RSIFVPSSHPRLFVKLLQELYSS*LSHSFQ
Trigger: CTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTTC...TTGGAGTAGCTTGACAAAGAGACGGGGGTGTGAACTGGGCACAAAGATACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACAACGAGCAGGCATCAGTaGAAGCTGTACAGATTACTA +
Preference number: 5 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTTSRHQ*KLYRLL
Trigger: TAGTAATCTGTACAGCTTCAACTGATGCCTGCTCGT...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGAAGGAGGATTCCAGTaGTCCACCAAAAATCACATG +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIEGGFQ*STKNHM
Trigger: CATGTGATTTTTGGTGGACAACTGGAATCCTCCTTC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCCACAGAAACAAAGGCTaGGAAAAAGTCCTCCACCCC +
Preference number: 5 (lower is better)
Translates to: LHCLSHYSGMNPSKREIIHRNKG*EKVLHP
Trigger: GGGGTGGAGGACTTTTTCCAAGCCTTTGTTTCTGTG...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp TCATGGTGGGGAAAAGTTCCTTTGGACCCAAAGGAAGAAGGCCTTTaGGCATCTGAGAAGATGTATGGTTTGGGATCTGTTGAGACTGAA +
Preference number: 5 (lower is better)
Translates to: SWWGKVPLDPKEEGL*ASEKMYGLGSVETE
Trigger: TTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAAAGGCCTTCTTCCTTTGGGTCCAAAGGAACTTTTCCCCACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS-3UTR CAA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCAACCTGAGGAGGTACTaGGGGGAAAAGGCATTATCT +
Preference number: 5 (lower is better)
Translates to: LHCLSHYSGMNPSKREIINLRRY*GEKALS
Trigger: AGATAATGCCTTTTCCCCCAAGTACCTCCTCAGGTT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTTTCAGTTTTCTCTGCTaGCTGTTCCCACGAGACATC +
Preference number: 5 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLFSFLC*LFPRDI
Trigger: GATGTCTCGTGGGAACAGCAAGCAGAGAAAACTGAA...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAGAGAAGATGTATGGTTaGGGATCTGTTGAGACTGAA +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTIEKMYG*GSVETE
Trigger: TTCAGTCTCAACAGATCCCAAACCATACATCTTCTC...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTGGGGAAAAGTTCCTTaGGACCCAAAGGAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: IVYLSCQELWSQCTSARFWGKVP*DPKEEG
Trigger: GCCTTCTTCCTTTGGGTCCAAAGGAACTTTTCCCCA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TGGAAGGTGCTTGTGTTTCAGTTCCTCACTGTCCCCACCCAAACTTCTTGCATGTTTAACACCGTTCCTTaGCAAGAACTAGAAAAACCG +
Preference number: 5 (lower is better)
Translates to: WKVLVFQFLTVPTQTSCMFNTVP*QELEKP
Trigger: CGGTTTTTCTAGTTCTTGCAAAGGAACGGTGTTAAA...CATGCAAGAAGTTTGGGTGGGGACAGTGAGGAACTGAAACACAAGCACCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACCAGGGAAGCAAGGTGGCTTCGCTACCTGCTTTACCTTTGTAAGAGATACATCATGCAGTACACACTaGCAGAGTATAAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: RPGKQGGFATCFTFVRDTSCSTH*QSIKLW
Trigger: CCACAGTTTTATACTCTGCAAGTGTGTACTGCATGA...TGTATCTCTTACAAAGGTAAAGCAGGTAGCGAAGCCACCTTGCTTCCCTGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTACAATGCTGGAAAACTaGCCAAGAGCAAGCCTCATT +
Preference number: 5 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLTMLEN*PRASLI
Trigger: AATGAGGCTTGCTCTTGGCAAGTTTTCCAGCATTGT...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGTGCAAGAAATTCCCTTaGTACCTTTTAGGGTTGATC +
Preference number: 5 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRCKKFP*YLLGLI
Trigger: GATCAACCCTAAAAGGTACAAAGGGAATTTCTTGCA...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AGACGAAATCAATATTCCGCCATATTTGACCTAGGTTGGGATGTGACAGCTGGCGAAGCTGGTCTGGCATaGAAGTTTTCTATGAAAAAC +
Preference number: 5 (lower is better)
Translates to: RRNQYSAIFDLGWDVTAGEAGLA*KFSMKN
Trigger: GTTTTTCATAGAAAACTTCAATGCCAGACCAGCTTC...GCCAGCTGTCACATCCCAACCTAGGTCAAATATGGCGGAATATTGATTTCGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp TTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTCTTCTGGGCCTGAAATCCTaGGATATTTATGAGTGCATA +
Preference number: 5 (lower is better)
Translates to: LSFMPRTVVTVHFCKVPLLGLKS*DIYECI
Trigger: TATGCACTCATAAATATCCAAGGATTTCAGGCCCAG...AAGAGGAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CACCGGCTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATAAATATCTTCAAGCCATaGAGTCCATGCATTTTAAGG +
Preference number: 5 (lower is better)
Translates to: HRLGILGNFLCAVLTCTINIFKP*SPCILR
Trigger: CCTTAAAATGCATGGACTCAATGGCTTGAAGATATT...TATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAGCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp CTTGGAATACTGGGGAATTTTCTCTGTGCAGTTCTGACGTGCACAATACAGAGGAGGGGATTATTAGCTTaGTCTCAAATCTCAAGGGTT +
Preference number: 5 (lower is better)
Translates to: LGILGNFLCAVLTCTIQRRGLLA*SQISRV
Trigger: AACCCTTGAGATTTGAGACAAAGCTAATAATCCCCT...CCTCTGTATTGTGCACGTCAGAACTGCACAGAGAAAATTCCCCAGTATTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCTCCAGACTCCTCTTCTaGAGGGATTTAGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLSRLLF*RDLEGA
Trigger: AGCCCCTTCTAAATCCCTCAAGAAGAGGAGTCTGGA...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp AAAGTAATCAGCATGTCACCGGATCATAGGCATTTTGAAGTGTATTTACAACTCGTGCACGTTGACCATTaGCAGAGTTTGCTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: KVISMSPDHRHFEVYLQLVHVDH*QSLLPC
Trigger: GCAAGGAAGCAAACTCTGCAAATGGTCAACGTGCAC...GAGTTGTAAATACACTTCAAAATGCCTATGATCCGGTGACATGCTGATTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCACAAGAGCATGTGCTaGCATCATCTGACCATAAAT +
Preference number: 5 (lower is better)
Translates to: IVYLSCQELWSQCTSARFHKSMC*HHLTIN
Trigger: ATTTATGGTCAGATGATGCAAGCACATGCTCTTGTG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCCTTCTTATGTTTTTCTaGGCTGGGCCTGAAATCCTT +
Preference number: 5 (lower is better)
Translates to: IVYLSCQELWSQCTSARFLLMFF*AGPEIL
Trigger: AAGGATTTCAGGCCCAGCCAAGAAAAACATAAGAAG...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp GGGGAATATCTTCAAGCCATTGAGTCCATGCATTTTAAGGAGAGAGCAGCTTCTCCATTCTCAGAAAAATaGGAACCTGGAGATACATTC +
Preference number: 5 (lower is better)
Translates to: GEYLQAIESMHFKERAASPFSEK*EPGDTF
Trigger: GAATGTATCTCCAGGTTCCAATTTTTCTGAGAATGG...AGAAGCTGCTCTCTCCTTAAAATGCATGGACTCAATGGCTTGAAGATATTCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 90 bp ACAATGCTGGAAAACCTTTATAAACAGTGGAGTGTTTTCAGCCAATaGTGCTCTGATTCAAACACAATGATCTGGTTGCCCAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: TMLENLYKQWSVFSQ*CSDSNTMIWLPRED
Trigger: GTCTTCTCTGGGCAACCAGATCATTGTGTTTGAATCAGAGCATCATTGGCTGAAAACACTCCACTGTTTATAAAGGTTTTCCAGCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS-3UTR CAA 90 bp CTACACTGCCTCTCTCATTACAGTGGCATGAATCCTTCGAAAAGGGAGATAATCACCACATCGCTTTTGTaGGGTTTAAAAAGTACACTA +
Preference number: 5 (lower is better)
Translates to: LHCLSHYSGMNPSKREIITTSLL*GLKSTL
Trigger: TAGTGTACTTTTTAAACCCAACAAAAGCGATGTGGT...GATTATCTCCCTTTTCGAAGGATTCATGCCACTGTAATGAGAGAGGCAGTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS-3UTR CAA 90 bp ATTGTTTATCTTTCATGCCAAGAACTGTGGTCACAGTGCACTTCTGCAAGGTTCTTACCCACCATGCTATaGGCAGTGTTTCCATTAAAA +
Preference number: 5 (lower is better)
Translates to: IVYLSCQELWSQCTSARFLPTML*AVFPLK
Trigger: TTTTAATGGAAACACTGCCAATAGCATGGTGGGTAA...GAACCTTGCAGAAGTGCACTGTGACCACAGTTCTTGGCATGAAAGATAAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp GGGCCCGGGCCGCCCTCCCCCTCGGACTCGGCGCTGTaGTCCGAAAGGCTGTGCAGGGGGCTGCAGGGCGCA +
Preference number: 6 (lower is better)
Translates to: GPGPPSPSDSAL*SERLCRGLQGA
Trigger: TGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCGAGGGGGAGGGCGGCCCGGGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCCCAGGGCTTCTCCGCTGCCGTCGCCTGCTGCCGCTaGAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTC +
Preference number: 6 (lower is better)
Translates to: SQGFSAAVACCR*RAHGFPAVGDF
Trigger: GAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GCCCTCGGGGGCCTTGGCATCCCAGGGCTTCTCCGCTaGCGTCGCCTGCTGCCGCTGCAGGGCGCACGGCTT +
Preference number: 6 (lower is better)
Translates to: ALGGLGIPGLLR*RRLLPLQGARL
Trigger: AAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTGGGATGCCAAGGCCCCCGAGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCCCCCTCGGACTCGGCGCTGTGCTCCGAAAGGCTGTaGAGGGGGCTGCAGGGCGCATGCGGCTGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: SPSDSALCSERL*RGLQGACGCSA
Trigger: CGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCGAGGGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp TGCCCGCATTCCGCACCTTGCCTGGGCTGCCCAGCGTaGGGCCCAGGCCCGGCGACAGGACAGGCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: CPHSAPCLGCPA*GPGPATGQAEC
Trigger: GCACTCTGCCTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp AGTGCGGACACAGGTACTTGCCCGCATTCCGCACCTTaGCTGGGCTGCCCAGCGTGGGGCCCAGGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: SADTGTCPHSAP*LGCPAWGPGPA
Trigger: CGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GAAAGGCTGTGCAGGGGGCTGCAGGGCGCATGCGGCTaGTCCGCGCTGTCGGAGCGCGACAGGTACCCCGAG +
Preference number: 6 (lower is better)
Translates to: ERLCRGLQGACG*SALSERDRYPE
Trigger: CTCGGGGTACCTGTCGCGCTCCGACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GGTGGAGCGCACGGGGCCCGGGGCCCTCCTACGGCCTaGCTCCAGCGCGCGGATGTCAAAGTGGAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: GGAHGARGPPTA*LQRADVKVEGV
Trigger: GACTCCTTCCACTTTGACATCCGCGCGCTGGAGCCAGGCCGTAGGAGGGCCCCGGGCCCCGTGCGCTCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp AGGGGTCCCGGGGCTCCCTGGGCTCCAGCCACGTCCTaGAGCCCTCGACGAAGGGCAGCGAGTTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: RGPGAPWAPATS*SPRRRAASCSW
Trigger: CCAGGAGCAACTCGCTGCCCTTCGTCGAGGGCTCCAGGACGTGGCTGGAGCCCAGGGAGCCCCGGGACCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp CTCTGCGGGCACCAGGGCATCGCCAATGGGGGTGCCTaGCAGGTCCTCCACCGCGGCCTGTCTGACCAGGGC +
Preference number: 6 (lower is better)
Translates to: LCGHQGIANGGA*QVLHRGLSDQG
Trigger: GCCCTGGTCAGACAGGCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp ACAGGTACTTGCCCGCATTCCGCACCTTGCCTGGGCTaGCCAGCGTGGGGCCCAGGCCCGGCGACAGGACAG +
Preference number: 6 (lower is better)
Translates to: TGTCPHSAPCLG*PAWGPGPATGQ
Trigger: CTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCAGCCTTCTCTGGCCGCACTTCCTGCCGCCCGCTCTaGCCTTGCCGGCCATGGCCTCCCGCGCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: SAFSGRTSCRPL*PCRPWPPAQQF
Trigger: GAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGAGAAGGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp CGTCTGTGTCCTCTGCGGGCACCAGGGCATCGCCAATaGGGGTGCCTGGCAGGTCCTCCACCGCGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: RLCPLRAPGHRQ*GCLAGPPPRPV
Trigger: GACAGGCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp TCGCGACCACAGTGCGGACACAGGTACTTGCCCGCATTCCGCACCTaGCCTGGGCTGCCCAGCGTGGGGCCCAGGCCCGGCGACAGGACA +
Preference number: 6 (lower is better)
Translates to: SRPQCGHRYLPAFRT*PGLPSVGPRPGDRT
Trigger: TGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp CCGCTCTGCCCTTGCCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTaGCGTCTGTGTCCTCTGCGGGCACCAGGGCATCGCCAATGGGGG +
Preference number: 6 (lower is better)
Translates to: PLCPCRPWPPAQQFS*RLCPLRAPGHRQWG
Trigger: CCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp ACACTGGGCTTCAGGCAGTCGCGACCACAGTGCGGACACAGGTACTaGCCCGCATTCCGCACCTTGCCTGGGCTGCCCAGCGTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TLGFRQSRPQCGHRY*PAFRTLPGLPSVGP
Trigger: GGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp CTCCAGAGGACTCCAGAGGCTCGCCCACCTGCCTGGCACTCTCCTTaGAGCCCCCTGGCACCTCCCCGGGATCGGCATCCTGCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: LQRTPEARPPAWHSP*SPLAPPRDRHPASG
Trigger: CCCAGAAGCAGGATGCCGATCCCGGGGAGGTGCCAGGGGGCTCAAAGGAGAGTGCCAGGCAGGTGGGCGAGCCTCTGGAGTCCTCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GGCTTCCCCACCTGGGTGGGGCCAGGCCCTTCAGGCTaGAGCACAGGGCTGAGTATGAAGGGCACGTTGCCC +
Preference number: 6 (lower is better)
Translates to: GFPTWVGPGPSG*STGLSMKGTLP
Trigger: GGGCAACGTGCCCTTCATACTCAGCCCTGTGCTGCAGCCTGAAGGGCCTGGCCCCACCCAGGTGGGGAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TGCAGGGCGCACGGCTTCCCGGCGGTCGGCGACTTCTaGTCTGGCAACTTACGCCAGGGTTGTGTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: CRAHGFPAVGDF*SGNLRQGCVLA
Trigger: GGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGCAGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCCTCCACCGCGGCCTGTCTGACCAGGGCCCGGGGATaGCCACTGGGAACGTCAGTCGAGCTTAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: SSTAACLTRARG*PLGTSVELSPE
Trigger: CTCGGGACTAAGCTCGACTGACGTTCCCAGTGGGCATCCCCGGGCCCTGGTCAGACAGGCCGCGGTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CTTGCCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTTaGGTCTGTGTCCTCTGCGGGCACCAGGGCATCGCC +
Preference number: 6 (lower is better)
Translates to: LAGHGLPRSSSL*VCVLCGHQGIA
Trigger: GGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TTCTCTGGCCGCACTTCCTGCCGCCCGCTCTGCCCTTaGCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: FSGRTSCRPLCP*RPWPPAQQFSL
Trigger: CAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTGCGGCCAGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CAGCGGAACCCAGGGCTCCTCTCTGGGGCTCAGCAATaGCCTGCCTCGGGGAGGCACGCACTCCGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: QRNPGLLSGAQQ*PASGRHALRFP
Trigger: TGGAAAGCGGAGTGCGTGCCTCCCCGAGGCAGGGCATTGCTGAGCCCCAGAGAGGAGCCCTGGGTTCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp CCTTGCCGGCCATGGCCTCCCGCGCAGCAGTTCTCTTaGCGTCTGTGTCCTCTGCGGGCACCAGGGCATCGC +
Preference number: 6 (lower is better)
Translates to: PCRPWPPAQQFS*RLCPLRAPGHR
Trigger: GCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp CGGGCAGAGGGACACTGCGGCTCAGGCAACACCACGTaGGCCGCGGCTCAGCCTTCAGTGAGGGAAAGGGGT +
Preference number: 6 (lower is better)
Translates to: RAEGHCGSGNTT*AAAQPSVRERG
Trigger: ACCCCTTTCCCTCACTGAAGGCTGAGCCGCGGCTCACGTGGTGTTGCCTGAGCCGCAGTGTCCCTCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCAGGCAGTCGCGACCACAGTGCGGACACAGGTACTTaGCCGCATTCCGCACCTTGCCTGGGCTGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: SGSRDHSADTGT*PHSAPCLGCPA
Trigger: CGCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CTCCCGCGCAGCAGTTCTCTTTGCGTCTGTGTCCTCTaGGGGCACCAGGGCATCGCCAATGGGGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: LPRSSSLCVCVL*GHQGIANGGAW
Trigger: CCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGGACACAGACGCAAAGAGAACTGCTGCGCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp AGGTGTAGGGCGTGGGCAGGTCGATGCTGCCCTGTTTaGACAGCCCGGTCTTCCGGGGCCGCACGTTGTCCA +
Preference number: 6 (lower is better)
Translates to: RCRAWAGRCCPV*TARSSGAARCP
Trigger: TGGACAACGTGCGGCCCCGGAAGACCGGGCTGTCCAAACAGGGCAGCATCGACCTGCCCACGCCCTACACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp GCTGGGCATCGTCCACCACCGCCTGGTTGTGGGAGATaGGCTGGGCGATGCGCTCCTCCAGCCGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: AGHRPPPPGCGR*AGRCAPPAASS
Trigger: AGAAGAAGCGGCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGACGATGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCGGCATCCTGCTTCTGGGATGACAAAGAGGCAGGCTaGGTGGGCCCACCTGGGGTCTCTGCGCTCACAGGC +
Preference number: 6 (lower is better)
Translates to: SASCFWDDKEAG*VGPPGVSALTG
Trigger: GCCTGTGAGCGCAGAGACCCCAGGTGGGCCCACGCAGCCTGCCTCTTTGTCATCCCAGAAGCAGGATGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GAACCCAGGGCTCCTCTCTGGGGCTCAGCAATGCCCTaGCTCGGGGAGGCACGCACTCCGCTTTCCACTGAA +
Preference number: 6 (lower is better)
Translates to: EPRAPLWGSAMP*LGEARTPLSTE
Trigger: TTCAGTGGAAAGCGGAGTGCGTGCCTCCCCGAGGCAGGGCATTGCTGAGCCCCAGAGAGGAGCCCTGGGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp TCGGGCACCTCCTTCCAGCTTGGGGTCCGGCCAAACTaGCCTGGGAGCCTCTACATCACCCCCTTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: SGTSFQLGVRPN*PGSLYITPFEG
Trigger: CCCCTCAAAGGGGGTGATGTAGAGGCTCCCAGGCCAGTTTGGCCGGACCCCAAGCTGGAAGGAGGTGCCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp TGCAGTCACGTGGCAGGAAGCCCCAGGGAGAGGGGCTaGAGCAGCGCTCTGAGTGGAGCCACCTGGTACACT +
Preference number: 6 (lower is better)
Translates to: CSHVAGSPRERG*SSALSGATWYT
Trigger: AGTGTACCAGGTGGCTCCACTCAGAGCGCTGCTCCAGCCCCTCTCCCTGGGGCTTCCTGCCACGTGACTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp TCAGGCTGCAGCACAGGGCTGAGTATGAAGGGCACGTaGCCCCCATCTAGGCTGCCCGTCACTAGCGGGGCG +
Preference number: 6 (lower is better)
Translates to: SGCSTGLSMKGT*PPSRLPVTSGA
Trigger: CGCCCCGCTAGTGACGGGCAGCCTAGATGGGGGCAACGTGCCCTTCATACTCAGCCCTGTGCTGCAGCCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp TTCAGGCAGTCGCGACCACAGTGCGGACACAGGTACTaGCCCGCATTCCGCACCTTGCCTGGGCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: FRQSRPQCGHRY*PAFRTLPGLPS
Trigger: GCTGGGCAGCCCAGGCAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp CGGCGCCCTCGGACTCTGAGGACAGCCGGGAGTTGTTaGGGTGCGTCTGCGTCCGCCTGTGCTTGTAGAGAT +
Preference number: 6 (lower is better)
Translates to: RRPRTLRTAGSC*GASASACACRD
Trigger: ATCTCTACAAGCACAGGCGGACGCAGACGCACCTCAACAACTCCCGGCTGTCCTCAGAGTCCGAGGGCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TGCACCGCCAAGTACACAGATGCCGCCTTTGCCTTCTaGTCCGCGGGCAGAGGGACACTGCGGCTCAGGCAA +
Preference number: 6 (lower is better)
Translates to: CTAKYTDAAFAF*SAGRGTLRLRQ
Trigger: TTGCCTGAGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp CTGGTCCCTCGCAGGAGGGGCAGGGCAGGTGGGTTCTaGAACCTCCATTCCGCATCATCTGGATGGCCCACA +
Preference number: 6 (lower is better)
Translates to: LVPRRRGRAGGF*NLHSASSGWPT
Trigger: TGTGGGCCATCCAGATGATGCGGAATGGAGGTTCCAGAACCCACCTGCCCTGCCCCTCCTGCGAGGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp AGACACCTGGTGCTGGGGCATCACCCCTGGGACTGTTaGGTAGGAGAACTTGGACATCTGCGCCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RHLVLGHHPWDC*VGELGHLRRPS
Trigger: GGAGGGCCGGCGCAGATGTCCAAGTTCTCCTACCCAACAGTCCCAGGGGTGATGCCCCAGCACCAGGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp CAGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTaGCCTTCTGCTCCGCGGGCAGAGGGACACTGCGGC +
Preference number: 6 (lower is better)
Translates to: QESAPPSTQMPP*PSAPRAEGHCG
Trigger: GCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp CAGACACCTGGTGCTGGGGCATCACCCCTGGGACTGTaGGGTAGGAGAACTTGGACATCTGCGCCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: QTPGAGASPLGL*GRRTWTSAPAL
Trigger: GAGGGCCGGCGCAGATGTCCAAGTTCTCCTACCCAACAGTCCCAGGGGTGATGCCCCAGCACCAGGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp GGCTGCTACCAGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTaGCCTTCTGCTCCGCGGGCAGAGGGACACTGCGGCTCAGGCAAC +
Preference number: 6 (lower is better)
Translates to: GCYQESAPPSTQMPP*PSAPRAEGHCGSGN
Trigger: GTTGCCTGAGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp CCAGGGCTTGTCCAGGTCCATCCTCCATTGCTCCCAGGAGGGCCATaGGGACCCTCATCTCGGAGGCTGCTACCAGGAAAGTGCACCGCC +
Preference number: 6 (lower is better)
Translates to: PGLVQVHPPLLPGGP*GPSSRRLLPGKCTA
Trigger: GGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGACAAGCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CCAGCCTCCCATTTGGAGAGACCAGGGGGCTCCTACTaGCTGAACAGGGACTGTCTCTGCCACCCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: PASHLERPGGSY*LNRDCLCHPVQ
Trigger: CTGCACTGGGTGGCAGAGACAGTCCCTGTTCAGGCAGTAGGAGCCCCCTGGTCTCTCCAAATGGGAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp AGGAAAGTGCACCGCCAAGTACACAGATGCCGCCTTTaGCTTCTGCTCCGCGGGCAGAGGGACACTGCGGCT +
Preference number: 6 (lower is better)
Translates to: RKVHRQVHRCRL*LLLRGQRDTAA
Trigger: AGCCGCAGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GCTGCTACCAGGAAAGTGCACCGCCAAGTACACAGATaGCGCCTTTGCCTTCTGCTCCGCGGGCAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: AATRKVHRQVHR*RLCLLLRGQRD
Trigger: GTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GACAGGGAGCAGCTTCGGTCCTCACATCCAGGTTCTTaGCAAGTAGGGGCACGTGGGCACCCGGAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: DREQLRSSHPGS*QVGARGHPEKG
Trigger: CCCTTTCTCCGGGTGCCCACGTGCCCCTACTTGCCAAGAACCTGGATGTGAGGACCGAAGCTGCTCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GCGGATATGTCCTCATGGACAGGGGTCCTCCTGTCTTaGGTGGGGACTGTGCCTGAGCTCCCTGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: ADMSSWTGVLLS*VGTVPELPAAS
Trigger: AGAGGCAGCAGGGAGCTCAGGCACAGTCCCCACCCAAGACAGGAGGACCCCTGTCCATGAGGACATATCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp CTTAGTGGGTTCAGTCACCAAGGAGGCCTCCAGGGCTaGTGGATTTCCCCAAGGCTCTGGCGTTGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: LSGFSHQGGLQG*WISPRLWRCPC
Trigger: GCAGGGGCAACGCCAGAGCCTTGGGGAAATCCACCAGCCCTGGAGGCCTCCTTGGTGACTGAACCCACTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GTCCTGCATGGCTTCAGTCCCTCAAGTGCGGGAGGGTaGCGGCTTCTTCTTCGCACCCAGGTTGGTGTGCGA +
Preference number: 6 (lower is better)
Translates to: VLHGFSPSSAGG*RLLLRTQVGVR
Trigger: TCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAGCCATGCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GGAATTCGATCAAGAGCGTCCATGAGACAAGCCCCCTaGGCTCCTGCACGGCCCCTCGCCACATCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GIRSRASMRQAP*APARPLATSFL
Trigger: GAGGAAGGATGTGGCGAGGGGCCGTGCAGGAGCCCAGGGGGCTTGTCTCATGGACGCTCTTGATCGAATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp GACCTGCTATTTCTGAAGAGGTCTGCCCAGGGGTCCTaGATGGCTTCAGTCCCTCAAGTGCGGGAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: DLLFLKRSAQGS*MASVPQVREGG
Trigger: GCCACCCTCCCGCACTTGAGGGACTGAAGCCATGCAGGACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp AAGTGTGTGGCTGGGTCTCAGCAGGAAACTCGGCCTTaGGGAGCCAACGCAGCCTCACAAGCAAGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: KCVAGSQQETRP*GANAASQASWG
Trigger: TCCCCAGCTTGCTTGTGAGGCTGCGTTGGCTCCCCAAGGCCGAGTTTCCTGCTGAGACCCAGCCACACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp GTGCGGGAGGGTGGCGGCTTCTTCTTCGCACCCAGGTaGGTGTGCGAAGTCTACTGGCTCTCAGCTGAACAC +
Preference number: 6 (lower is better)
Translates to: VREGGGFFFAPR*VCEVYWLSAEH
Trigger: GTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp AGCTGTGGTCAGGAGGAGCAGGGACACCCTTCACCTTaGCAGTTCAGTCCCTGGGCCCTTCTCCAGACCCCA +
Preference number: 6 (lower is better)
Translates to: SCGQEEQGHPSP*QFSPWALLQTP
Trigger: TGGGGTCTGGAGAAGGGCCCAGGGACTGAACTGCAAAGGTGAAGGGTGTCCCTGCTCCTCCTGACCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp GTCCCTCAAGTGCGGGAGGGTGGCGGCTTCTTCTTCGCACCCAGGTaGGTGTGCGAAGTCTACTGGCTCTCAGCTGAACACAGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: VPQVREGGGFFFAPR*VCEVYWLSAEHSSA
Trigger: TGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp GGCTCCAAAGCACAGTCTATATTCCAATGCAGGTGCTGTCATGCCTaGTCCTGTGGGGGAGGCAGCGGAACCCAGGGCTCCTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: GSKAQSIFQCRCCHA*SCGGGSGTQGSSLG
Trigger: CCCCAGAGAGGAGCCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGCTTTGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 72 bp AGGCGATGGATACGGTGGCTGTCACCCTCCATGTCCTaGACTAAGTGTGCCTCACACGTTGGAGTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: RRWIRWLSPSMS*TKCASHVGVGG
Trigger: CCCGCCCACTCCAACGTGTGAGGCACACTTAGTTCAGGACATGGAGGGTGACAGCCACCGTATCCATCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCTAGAACACTGGGCTTCAGGCAGTCGCGACCACAGTaGGGACACAGGTACTTGCCCGCATTCCGCACCTTG +
Preference number: 6 (lower is better)
Translates to: SRTLGFRQSRPQ*GHRYLPAFRTL
Trigger: CAAGGTGCGGAATGCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGTGTTCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCCCAGGAGGGCCATTGGGACCCTCATCTCGGAGGCTaGTACCAGGAAAGTGCACCGCCAAGTACACAGATG +
Preference number: 6 (lower is better)
Translates to: SQEGHWDPHLGG*YQESAPPSTQM
Trigger: CATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp TCCAGGTCCATCCTCCATTGCTCCCAGGAGGGCCATTaGGACCCTCATCTCGGAGGCTGCTACCAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: SRSILHCSQEGH*DPHLGGCYQES
Trigger: ACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp TGCGGGAGGGTGGCGGCTTCTTCTTCGCACCCAGGTTaGTGTGCGAAGTCTACTGGCTCTCAGCTGAACACA +
Preference number: 6 (lower is better)
Translates to: CGRVAASSSHPG*CAKSTGSQLNT
Trigger: TGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp GCACAGTCTATATTCCAATGCAGGTGCTGTCATGCCTaGTCCTGTGGGGGAGGCAGCGGAACCCAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: AQSIFQCRCCHA*SCGGGSGTQGS
Trigger: GGAGCCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp GGTCTCCCTGGCAAGAGGGTCTGTGCTCTGCCCTCTTCTGTGACTTaGCTGTCTGGGGAGCTTGATGTCAGAGTCCTCCCTGCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: GLPGKRVCALPSSVT*LSGELDVRVLPAVW
Trigger: CCAGACTGCAGGGAGGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAGACCCTCTTGCCAGGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TTGGGACCCTCATCTCGGAGGCTGCTACCAGGAAAGTaGACCGCCAAGTACACAGATGCCGCCTTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: LGPSSRRLLPGK*TAKYTDAAFAF
Trigger: GAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTAGCAGCCTCCGAGATGAGGGTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp GAGGGTGGCGGCTTCTTCTTCGCACCCAGGTTGGTGTaGGAAGTCTACTGGCTCTCAGCTGAACACAGCTCT +
Preference number: 6 (lower is better)
Translates to: EGGGFFFAPRLV*EVYWLSAEHSS
Trigger: AGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GGACAGCTGGGTCTGATTGCTTTTGGTTACTGGGCTTaGGGCCACCAGGGAAACAGGCTTCCCAAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: GQLGLIAFGYWA*GHQGNRLPKAP
Trigger: AGGGGCTTTGGGAAGCCTGTTTCCCTGGTGGCCCCAAGCCCAGTAACCAAAAGCAATCAGACCCAGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CCA 72 bp GACTGTAGGAATGTTCGTCTCTGCCTTGGCTGTGCCTaGCCTCACAATGGAACCCAGCATCCAGCACAGGGC +
Preference number: 6 (lower is better)
Translates to: DCRNVRLCLGCA*PHNGTQHPAQG
Trigger: GCCCTGTGCTGGATGCTGGGTTCCATTGTGAGGCCAGGCACAGCCAAGGCAGAGACGAACATTCCTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp AGGGCTGGGCACCTGACAGCCTGTCTTTCGTTCCTGTaGATCCGTCCATTCTCTGGTCTGTGGAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RAGHLTACLSFL*IRPFSGLWSLV
Trigger: CACCAAGCTCCACAGACCAGAGAATGGACGGATCCACAGGAACGAAAGACAGGCTGTCAGGTGCCCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp GAGCAGGGACACCCTTCACCTTTGCAGTTCAGTCCCTaGGCCCTTCTCCAGACCCCAAATGTGCAGTCACGT +
Preference number: 6 (lower is better)
Translates to: EQGHPSPLQFSP*ALLQTPNVQSR
Trigger: ACGTGACTGCACATTTGGGGTCTGGAGAAGGGCCCAGGGACTGAACTGCAAAGGTGAAGGGTGTCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp TGGACAGCTGGGTCTGATTGCTTTTGGTTACTGGGCTaGGGGCCACCAGGGAAACAGGCTTCCCAAAGCCCC +
Preference number: 6 (lower is better)
Translates to: WTAGSDCFWLLG*GPPGKQASQSP
Trigger: GGGGCTTTGGGAAGCCTGTTTCCCTGGTGGCCCCAAGCCCAGTAACCAAAAGCAATCAGACCCAGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CAA 72 bp GCACGCACTCCGCTTTCCACTGAAGCTGGTTCCCTCTaGGGGTTTGGTTCCCCTAACATCCACCGCATGCTC +
Preference number: 6 (lower is better)
Translates to: ARTPLSTEAGSL*GFGSPNIHRML
Trigger: GAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAGTGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 72 bp TCCCTGGCAAGAGGGTCTGTGCTCTGCCCTCTTCTGTaGCTTTGCTGTCTGGGGAGCTTGATGTCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SLARGSVLCPLL*LCCLGSLMSES
Trigger: GGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAGACCCTCTTGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CAAAGCACAGTCTATATTCCAATGCAGGTGCTGTCATaGCTTGTCCTGTGGGGGAGGCAGCGGAACCCAGGG +
Preference number: 6 (lower is better)
Translates to: QSTVYIPMQVLS*LVLWGRQRNPG
Trigger: CCCTGGGTTCCGCTGCCTCCCCCACAGGACAAGGCATGACAGCACCTGCATTGGAATATAGACTGTGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp CTTGGTGTCGTGAGCGACTGTAGGAATGTTCGTCTCTaGCTTGGCTGTGCCTGGCCTCACAATGGAACCCAG +
Preference number: 6 (lower is better)
Translates to: LGVVSDCRNVRL*LGCAWPHNGTQ
Trigger: CTGGGTTCCATTGTGAGGCCAGGCACAGCCAAGGCAGAGACGAACATTCCTACAGTCGCTCACGACACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp CACGCACTCCGCTTTCCACTGAAGCTGGTTCCCTCTTaGGGTTTGGTTCCCCTAACATCCACCGCATGCTCT +
Preference number: 6 (lower is better)
Translates to: HALRFPLKLVPS*GLVPLTSTACS
Trigger: AGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAGTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp GGCAAGAGGGTCTGTGCTCTGCCCTCTTCTGTGACTTaGCTGTCTGGGGAGCTTGATGTCAGAGTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: GKRVCALPSSVT*LSGELDVRVLP
Trigger: AGGGAGGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAGACCCTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp CTACTCACTCTAGAGAGGAAGGGCCAGCAGCCCCGGTaGGAAATCAACAGGTCAAGTCAAAGGCAGGACGGC +
Preference number: 6 (lower is better)
Translates to: LLTLERKGQQPR*EINRSSQRQDG
Trigger: GCCGTCCTGCCTTTGACTTGACCTGTTGATTTCCAACCGGGGCTGCTGGCCCTTCCTCTCTAGAGTGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CAA 90 bp AGGCACGCACTCCGCTTTCCACTGAAGCTGGTTCCCTCTTGGGGTTaGGTTCCCCTAACATCCACCGCATGCTCTCTCCATTGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: RHALRFPLKLVPSWG*VPLTSTACSLHCQK
Trigger: CTTCTGACAATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAGTGCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp AGCCTGTCTTTCGTTCCTGTGGATCCGTCCATTCTCTaGTCTGTGGAGCTTGGTGTCGTGAGCGACTGTAGG +
Preference number: 6 (lower is better)
Translates to: SLSFVPVDPSIL*SVELGVVSDCR
Trigger: CCTACAGTCGCTCACGACACCAAGCTCCACAGACCAGAGAATGGACGGATCCACAGGAACGAAAGACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp GGCAGGTGGGTTCTGGAACCTCCATTCCGCATCATCTaGATGGCCCACAATGCTGGAAAACTTGCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: GRWVLEPPFRII*MAHNAGKLAKS
Trigger: GCTCTTGGCAAGTTTTCCAGCATTGTGGGCCATCCAGATGATGCGGAATGGAGGTTCCAGAACCCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp CTCCGCTTTCCACTGAAGCTGGTTCCCTCTTGGGGTTaGGTTCCCCTAACATCCACCGCATGCTCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: LRFPLKLVPSWG*VPLTSTACSLH
Trigger: ATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGGAACCAGCTTCAGTGGAAAGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp TGTGAGTCACTACTCACTCTAGAGAGGAAGGGCCAGCAGCCCCGGTaGGAAATCAACAGGTCAAGTCAAAGGCAGGACGGCACCTTCATC +
Preference number: 6 (lower is better)
Translates to: CESLLTLERKGQQPR*EINRSSQRQDGTFI
Trigger: GATGAAGGTGCCGTCCTGCCTTTGACTTGACCTGTTGATTTCCAACCGGGGCTGCTGGCCCTTCCTCTCTAGAGTGAGTAGTGACTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS TCA 72 bp ATCCGTCCATTCTCTGGTCTGTGGAGCTTGGTGTCGTaGGCGACTGTAGGAATGTTCGTCTCTGCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: IRPFSGLWSLVS*ATVGMFVSALA
Trigger: AGCCAAGGCAGAGACGAACATTCCTACAGTCGCTCACGACACCAAGCTCCACAGACCAGAGAATGGACGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp CAAGGGGACCTGAGTGGGGCTCGTGTCAGAGATAACTaGGTGTGCTTGGAAGGAATCATCCATCATGCTTGC +
Preference number: 6 (lower is better)
Translates to: QGDLSGARVRDN*VCLEGIIHHAC
Trigger: GCAAGCATGATGGATGATTCCTTCCAAGCACACGCAGTTATCTCTGACACGAGCCCCACTCAGGTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CCA 72 bp TTAGCTGGACAGCTGGGTCTGATTGCTTTTGGTTACTaGGCTTGGGGCCACCAGGGAAACAGGCTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: LAGQLGLIAFGY*AWGHQGNRLPK
Trigger: TTTGGGAAGCCTGTTTCCCTGGTGGCCCCAAGCCCAGTAACCAAAAGCAATCAGACCCAGCTGTCCAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CCA 72 bp GGTGGGTTCTGGAACCTCCATTCCGCATCATCTGGATaGCCCACAATGCTGGAAAACTTGCCAAGAGCAAGC +
Preference number: 6 (lower is better)
Translates to: GGFWNLHSASSG*PTMLENLPRAS
Trigger: GCTTGCTCTTGGCAAGTTTTCCAGCATTGTGGGCCATCCAGATGATGCGGAATGGAGGTTCCAGAACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp CAAGGGGACCTGAGTGGGGCTCGTGTCAGAGATAACTGCGTGTGCTaGGAAGGAATCATCCATCATGCTTGCCTGATAGAATCACTCGGG +
Preference number: 6 (lower is better)
Translates to: QGDLSGARVRDNCVC*EGIIHHACLIESLG
Trigger: CCCGAGTGATTCTATCAGGCAAGCATGATGGATGATTCCTTCCAAGCACACGCAGTTATCTCTGACACGAGCCCCACTCAGGTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS CAA 90 bp TGTGTGTCCGAGGGAGACTCACGGGTAGAAAGAATAACTCTCTCATaGGCCATGCCCCTCTGGTCTTGCACCATCAGACACACATGCCAG +
Preference number: 6 (lower is better)
Translates to: CVSEGDSRVERITLS*AMPLWSCTIRHTCQ
Trigger: CTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTTTCTACCCGTGAGTCTCCCTCGGACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp AGAGGGCATTTTAGTGTTCTCTCCCAGTTCCTACTCTaGAGGCAGCATCTCAGAGAACGGAGAGATGCTCCC +
Preference number: 6 (lower is better)
Translates to: RGHFSVLSQFLL*RQHLRERRDAP
Trigger: GGGAGCATCTCTCCGTTCTCTGAGATGCTGCCTGCAGAGTAGGAACTGGGAGAGAACACTAAAATGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS GCA 72 bp TCTTGCAGATTCAGACCTGCTATTTCTGAAGAGGTCTaGCCAGGGGTCCTGCATGGCTTCAGTCCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: SCRFRPAISEEV*PGVLHGFSPSS
Trigger: ACTTGAGGGACTGAAGCCATGCAGGACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTCTGAATCTGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp CCCTCTTGGGGTTTGGTTCCCCTAACATCCACCGCATaGTCTCTCCATTGTCAGAAGAGGTTGATCATCACC +
Preference number: 6 (lower is better)
Translates to: PSWGLVPLTSTA*SLHCQKRLIIT
Trigger: GGTGATGATCAACCTCTTCTGACAATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp GAACTTGCTGGAGAGACCACAGACTTACGCACCAGGTaGAAGCTGATGCCAAAGGCTCCAAAGCACAGTCTA +
Preference number: 6 (lower is better)
Translates to: ELAGETTDLRTR*KLMPKAPKHSL
Trigger: TAGACTGTGCTTTGGAGCCTTTGGCATCAGCTTCCACCTGGTGCGTAAGTCTGTGGTCTCTCCAGCAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp ACGGGTAGAAAGAATAACTCTCTCATTGGCCATGCCCCTCTGGTCTaGCACCATCAGACACACATGCCAGTCCAGAAGCTGTGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: TGRKNNSLIGHAPLV*HHQTHMPVQKLWSG
Trigger: TCCTGACCACAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTTTCTACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp AAGAAGGCCTTTGAGCATCTGAGAAGATGTATGGTTTGGGATCTGTaGAGACTGAATCCTGGGAGGCCAGCAGCTGAGTCTCCAGCAACC +
Preference number: 6 (lower is better)
Translates to: KKAFEHLRRCMVWDL*RLNPGRPAAESPAT
Trigger: GGTTGCTGGAGACTCAGCTGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAAAGGCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 90 bp CTCTTGGGGTTTGGTTCCCCTAACATCCACCGCATGCTCTCTCCATaGTCAGAAGAGGTTGATCATCACCAGCCCTTTAAGTGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: LLGFGSPNIHRMLSP*SEEVDHHQPFKCSV
Trigger: GACTGAGCACTTAAAGGGCTGGTGATGATCAACCTCTTCTGACAATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAACCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS GCA 72 bp AGAATAACTCTCTCATTGGCCATGCCCCTCTGGTCTTaGACCATCAGACACACATGCCAGTCCAGAAGCTGT +
Preference number: 6 (lower is better)
Translates to: RITLSLAMPLWS*TIRHTCQSRSC
Trigger: ACAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp TTCTTCTTCGCACCCAGGTTGGTGTGCGAAGTCTACTaGCTCTCAGCTGAACACAGCTCTGCAAGAAATTCC +
Preference number: 6 (lower is better)
Translates to: FFFAPRLVCEVY*LSAEHSSARNS
Trigger: GGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGTGCGAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp TCTCTTCCTTCCCACAACAAGGAGGTGATTCTGAGGTaGCACAAGATGGCTCCTCTTGCAGATTCAGACCTG +
Preference number: 6 (lower is better)
Translates to: SLPSHNKEVILR*HKMAPLADSDL
Trigger: CAGGTCTGAATCTGCAAGAGGAGCCATCTTGTGCCACCTCAGAATCACCTCCTTGTTGTGGGAAGGAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp TCAGTTTTCTCTGCTTGCTGTTCCCACGAGACATCTTaGCCCTCCAAGGCAGGCCTTTCTTCCATTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SVFSACCSHETS*PSKAGLSSILA
Trigger: AGCCAGAATGGAAGAAAGGCCTGCCTTGGAGGGCAAAGATGTCTCGTGGGAACAGCAAGCAGAGAAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp AAGAATAACTCTCTCATTGGCCATGCCCCTCTGGTCTaGCACCATCAGACACACATGCCAGTCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: KNNSLIGHAPLV*HHQTHMPVQKL
Trigger: CAGCTTCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 72 bp ACCCAGGTTGGTGTGCGAAGTCTACTGGCTCTCAGCTaGACACAGCTCTGCAAGAAATTCCCTTTGTACCTT +
Preference number: 6 (lower is better)
Translates to: TQVGVRSLLALS*TQLCKKFPLYL
Trigger: AAGGTACAAAGGGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAGTAGACTTCGCACACCAACCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp GATAGAATCACTCGGGAGGCAACAGACCAGGCTCAATaGTTAAGATCCCTTCATCTGGCCTTGCATCCCAGA +
Preference number: 6 (lower is better)
Translates to: DRITREATDQAQ*LRSLHLALHPR
Trigger: TCTGGGATGCAAGGCCAGATGAAGGGATCTTAATCATTGAGCCTGGTCTGTTGCCTCCCGAGTGATTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610729.1
CDS GCA 72 bp TCGTCGCTGCTGGTGTCACTGAACTCTACTCGAGTTTaGTTTCTCATTCCTTCCAGACTCCTCTTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: SSLLVSLNSTRV*FLIPSRLLFLR
Trigger: CCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTTCAGTGACACCAGCAGCGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GGTGGGTTCTGGAACCTCCATTCCGCATCATCTGGATaGCCCACAATGCTGGAAAACCTTTATAAACAGTGG +
Preference number: 6 (lower is better)
Translates to: GGFWNLHSASSG*PTMLENLYKQW
Trigger: CCACTGTTTATAAAGGTTTTCCAGCATTGTGGGCCATCCAGATGATGCGGAATGGAGGTTCCAGAACCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS CCA 72 bp ATACAAACGGCAGCCACAGAGGTAGCAATGTCATGGTaGGGAAAAGTTCCTTTGGACCCAAAGGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: IQTAATEVAMSW*GKVPLDPKEEG
Trigger: GCCTTCTTCCTTTGGGTCCAAAGGAACTTTTCCCCACCATGACATTGCTACCTCTGTGGCTGCCGTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CCA 72 bp GTAGAAAGAATAACTCTCTCATTGGCCATGCCCCTCTaGTCTTGCACCATCAGACACACATGCCAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: VERITLSLAMPL*SCTIRHTCQSR
Trigger: TCTGGACTGGCATGTGTGTCTGATGGTGCAAGACCAGAGGGGCATGGCCAATGAGAGAGTTATTCTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 72 bp ACATCCACCGCATGCTCTCTCCATTGTCAGAAGAGGTaGATCATCACCAGCCCTTTAAGTGCTCAGTCCACA +
Preference number: 6 (lower is better)
Translates to: TSTACSLHCQKR*IITSPLSAQST
Trigger: TGTGGACTGAGCACTTAAAGGGCTGGTGATGATCAACCTCTTCTGACAATGGAGAGAGCATGCGGTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CCA 72 bp AAGAAGGCCTTTGAGCATCTGAGAAGATGTATGGTTTaGGATCTGTTGAGACTGAATCCTGGGAGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: KKAFEHLRRCMV*DLLRLNPGRPA
Trigger: TGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAAAGGCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS CAA 72 bp TTTGGTTCCCCTAACATCCACCGCATGCTCTCTCCATaGTCAGAAGAGGTTGATCATCACCAGCCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: FGSPNIHRMLSP*SEEVDHHQPFK
Trigger: CTTAAAGGGCTGGTGATGATCAACCTCTTCTGACAATGGAGAGAGCATGCGGTGGATGTTAGGGGAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp TCGGTCTTCATCGTCGCTGCTGGTGTCACTGAACTCTACTCGAGTTaGCTTTCTCATTCCTTCCAGACTCCTCTTCTTGAGGGATTTAGA +
Preference number: 6 (lower is better)
Translates to: SVFIVAAGVTELYSS*LSHSFQTPLLEGFR
Trigger: TCTAAATCCCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTTCAGTGACACCAGCAGCGACGATGAAGACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp ACCACAGAATCTTTCCGAGTGATTAATCCAGATACCTaGCGTTTCCTACCGTCACTTCCTAAAGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: TTESFRVINPDT*RFLPSLPKEGQ
Trigger: CTGCCCCTCTTTAGGAAGTGACGGTAGGAAACGTCAGGTATCTGGATTAATCACTCGGAAAGATTCTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TCTAGAGAAAAACCGACTGCTCATCACAGCAGGCCATaGACAGAGACTCCACAGAAACAAAGGCTTGGAAAA +
Preference number: 6 (lower is better)
Translates to: SREKPTAHHSRP*TETPQKQRLGK
Trigger: TTTTCCAAGCCTTTGTTTCTGTGGAGTCTCTGTGCATGGCCTGCTGTGATGAGCAGTCGGTTTTTCTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610729.1
ENST00000637017.1
CDS CAA 90 bp AACTCTACTCGAGTTTGCTTTCTCATTCCTTCCAGACTCCTCTTCTaGAGGGATTTAGAAGGGGCTTCAGGAATTTCTATGGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: NSTRVCFLIPSRLLF*RDLEGASGISMGCS
Trigger: AGAGCAGCCCATAGAAATTCCTGAAGCCCCTTCTAAATCCCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCAAACTCGAGTAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS TCA 72 bp CTGTGGCTTGGCCTTTATGTCAAGTCCACGTTTAACTaGGAAAAGCACCATTTCAAGCAACCTGGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: LWLGLYVKSTFN*EKHHFKQPGRD
Trigger: GTCTCTTCCAGGTTGCTTGAAATGGTGCTTTTCTCAGTTAAACGTGGACTTGACATAAAGGCCAAGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS CAA 72 bp CAAGAGCAAGCCTCATTCGGAAAACTGCAGTCTGCATaGACTATTCTTTCAAACAAAACTACCTCATGCAGC +
Preference number: 6 (lower is better)
Translates to: QEQASFGKLQSA*TILSNKTTSCS
Trigger: GCTGCATGAGGTAGTTTTGTTTGAAAGAATAGTCAATGCAGACTGCAGTTTTCCGAATGAGGCTTGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS CAA 90 bp TCCGCCAGCCTGACAACATTTACTTGTGAAGCGTCAACAGTCTTTTaGACCAGACACCATGTTTCTCTGGAAGCTTCATATTTCTATAAC +
Preference number: 6 (lower is better)
Translates to: SASLTTFTCEASTVF*TRHHVSLEASYFYN
Trigger: GTTATAGAAATATGAAGCTTCCAGAGAAACATGGTGTCTGGTCAAAAAGACTGTTGACGCTTCACAAGTAAATGTTGTCAGGCTGGCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1
CDS GCA 72 bp TTGCCAAGAGCAAGCCTCATTCGGAAAACTGCAGTCTaGATTGACTATTCTTTCAAACAAAACTACCTCATG +
Preference number: 6 (lower is better)
Translates to: LPRASLIRKTAV*IDYSFKQNYLM
Trigger: CATGAGGTAGTTTTGTTTGAAAGAATAGTCAATGCAGACTGCAGTTTTCCGAATGAGGCTTGCTCTTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637017.1
CDS TCA 72 bp GAAAACCTTTATAAACAGTGGAGTGTTTTCAGCCAATaGTGCTCTGATTCAAACACAATGATCTGGTTGCCC +
Preference number: 6 (lower is better)
Translates to: ENLYKQWSVFSQ*CSDSNTMIWLP
Trigger: GGGCAACCAGATCATTGTGTTTGAATCAGAGCATCATTGGCTGAAAACACTCCACTGTTTATAAAGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371030.4
CDS CAA 72 bp CTGACAACATTTACTTGTGAAGCGTCAACAGTCTTTTaGACCAGACACCATGTTTCTCTGGAAGCTTCATAT +
Preference number: 6 (lower is better)
Translates to: LTTFTCEASTVF*TRHHVSLEASY
Trigger: ATATGAAGCTTCCAGAGAAACATGGTGTCTGGTCAAAAAGACTGTTGACGCTTCACAAGTAAATGTTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371030.4
ENST00000637017.1