Pregenerated sensors for ZNF83 (Homo sapiens)
Ensembl gene IDs: ENSG00000167766Ensembl transcript IDs: ENST00000301096.7, ENST00000536937.5, ENST00000541777.6, ENST00000545872.1, ENST00000594682.6, ENST00000597597.1, ENST00000600714.5, ENST00000601140.1, ENST00000601257.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCTTGCCTGGTTTTTATTaGGTGGATCTCTCACGACAA | + |
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Preference number: 2 (lower is better) Translates to: RHEISDDVQDMNCRGRVCLPGFY*VDLSRQ Trigger: TTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAA...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCCCAGCAAGAATTCTTTaGAGAATCCTGGTCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: QIHYICLVFIEWISHDKIPARIL*RILVSD Trigger: ATCTGAGACCAGGATTCTTCAAAGAATTCTTGCTGG...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCCAATATTGTACAATGTaGGAATTGTGCCAGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: QIHYICLVFIEWISHDKIQYCTM*ELCQKT Trigger: GGTCTTCTGGCACAATTCTCACATTGTACAATATTG...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGTGATGTTCCGGTTTTaGTGCCTGGGTAAAAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHVMFRF*CLGKSL Trigger: TAAGCTTTTACCCAGGCATCAAAACCGGAACATCAC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAACAGGCTGCTTTTGTaGATCATCCTTTCTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHNRLLL*IILSPM Trigger: CATGGGAGAAAGGATGATGCACAAAAGCAGCCTGTT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTGCCTAGTGAGACTTTaGCCTGCGGAAAATCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHCLVRL*PAENLY Trigger: ATAGAGATTTTCCGCAGGCCAAAGTCTCACTAGGCA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCCAGCAAGAATTCTTTaGAGAATCCTGGTCTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHPARIL*RILVSD Trigger: ATCTGAGACCAGGATTCTTCAAAGAATTCTTGCTGG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCAATATTGTACAATGTaGGAATTGTGCCAGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHQYCTM*ELCQKT Trigger: GGTCTTCTGGCACAATTCTCACATTGTACAATATTG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGGTTTAATCCAAGCTaGTTTTTAACAGGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: EWISHDKIMNITLKGLLHGFNPS*FLTGCF Trigger: AAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR-3UTR CAA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCTTTAACAGGCTGCTTTaGTGCATCATCCTTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RHEISDDVQDMNCRGRVCFNRLL*CIILSP Trigger: GGGAGAAAGGATGATGCACAAAAGCAGCCTGTTAAA...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR TCA 72 bp | CATCATCCTTTCTCCCATGCATGTCTCTTCTACCAATaGGACTTTCCTTATAGGTCACACGCACTCGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HHPFSHACLFYQ*DFPYRSHALAY Trigger: ATAAGCGAGTGCGTGTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR-3UTR CAA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCATGAATGATCAGATGTaGTACAAGGTAGGAATTGCG | + |
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Preference number: 3 (lower is better) Translates to: RHEISDDVQDMNCRGRVCMNDQM*YKVGIA Trigger: CGCAATTCCTACCTTGTACAACATCTGATCATTCAT...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGCCTAGTGAGACTTaGGCCTGCGGAAAATCTCTA | + |
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Preference number: 3 (lower is better) Translates to: EWISHDKIMNITLKGLLHMPSET*ACGKSL Trigger: TAGAGATTTTCCGCAGGCCAAAGTCTCACTAGGCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | CCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTGAGGAGGCACTCAGCAGGCTaGGGCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVRRGGARLQSQALSRLRRHSAG*GRRIRQ Trigger: CTGCCTGATTCTCCTGCCTCAGCCTGCTGAGTGCCT...CCTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCACGCCTGACTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601257.5 |
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| CDS-3UTR GCA 90 bp | TCCCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCGTCTCCAGTGGCGGCGCGCGCCTaGAATCACAGGCACTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRLGAGDQPGQHSESPSPVAARA*NHRHSA Trigger: TGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCAC...TGGAGACGGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600714.5 |
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| CDS-3UTR CCA 90 bp | CCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTGAGGTGCAGTGAGCCAAGATaGCAGCAGTACCGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVRRGGARLQSQALSRLRCSEPR*QQYRPA Trigger: AGCTGGACGGTACTGCTGCCATCTTGGCTCACTGCA...CCTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCACGCCTGACTGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601257.5 |
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| CDS-3UTR TCA 90 bp | TCACTCCCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCGTCAGGCACTCAGCAGGCTaGGGCAGGAGAATCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPVRSWRPARPTQRIPVRHSAG*GRRIRQ Trigger: CTGCCTGATTCTCCTGCCTCAGCCTGCTGAGTGCCT...GACGGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGGGAGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600714.5 |
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| CDS-3UTR TCA 90 bp | ACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTGAGTGTGGCCCTGATGTGTaGAGACTTAGGACCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSQAWRRAPAITGTQQAECGPDV*RLRTIL Trigger: CAGGATGGTCCTAAGTCTTCACACATCAGGGCCACA...CTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCACGCCTGACTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601257.5 |
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| CDS-3UTR CCA 90 bp | GGATCACTCCCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCTGCAGTGAGCCAAGATaGCAGCAGTACCGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPVRSWRPARPTQRIPCSEPR*QQYRPA Trigger: AGCTGGACGGTACTGCTGCCATCTTGGCTCACTGCA...GGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGGGAGTGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600714.5 |
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| CDS-3UTR TCA 90 bp | CAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTGAGGCAGGAAATGTCAATAGACCCTaGGGAAGAACCATTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAWRRAPAITGTQQAEAGNVNRP*GRTIPD Trigger: GTCAGGAATGGTTCTTCCTCAGGGTCTATTGACATT...TCCTGCCTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCACGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601257.5 |
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| CDS-3UTR TCA 90 bp | GATCACTCCCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCGAATGTCAATAGACCCTaGGGAAGAACCATTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DHSRLGAGDQPGQHSESPNVNRP*GRTIPD Trigger: GTCAGGAATGGTTCTTCCTCAGGGTCTATTGACATT...CGGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGGGAGTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600714.5 |
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| CDS-3UTR TCA 90 bp | GCAACAAGAGCAAAAACTCCATCATGTCACTTGGTAATCCTTCCTAGACAGCGGGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ATRAKTPSCHLVILPRQRGGRIA*TREAEV Trigger: CACCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...CCGCTGTCTAGGAAGGATTACCAAGTGACATGATGGAGTTTTTGCTCTTGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601140.1 |
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| CDS-3UTR CCA 90 bp | TCCCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCGTCTCCAGGGAGACCATTTTTCTaGGTTTCTCTGAAGCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SRLGAGDQPGQHSESPSPGRPFF*VSLKQK Trigger: TTTTTGCTTCAGAGAAACCCAGAAAAATGGTCTCCC...TGGAGACGGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600714.5 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCGGGAGAATCGCTTaGACCCGGGAGGCGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGGRIA*TREAEV Trigger: CACCTCCGCCTCCCGGGTTCAAGCGATTCTCCCGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR TCA 90 bp | CCATCATGTCACTTGGTAATCCTTCCTAGACAGCGGTATGTCCACCATCGTACAAATGTCAATAGACCCTaGGGAAGAACCATTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PSCHLVILPRQRYVHHRTNVNRP*GRTIPD Trigger: GTCAGGAATGGTTCTTCCTCAGGGTCTATTGACATT...TGTACGATGGTGGACATACCGCTGTCTAGGAAGGATTACCAAGTGACATGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601140.1 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCGGCTCACTGCAGCCTaGACCTCCTGGGTTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHRLTAA*TSWVQV Trigger: CACTTGAACCCAGGAGGTCCAGGCTGCAGTGAGCCG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCGTAGGAGGATTACTTaGGCCCAGGAGGACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHRRRIT*AQEDQA Trigger: AGCCTGGTCCTCCTGGGCTCAAGTAATCCTCCTACG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCCGAGATCGTGTCACTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHPRSCH*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAGTGACACGATCTCGG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGATCTCGGCTCACTaGAGCCTGGACCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHMISAH*SLDLLG Trigger: ACCCAGGAGGTCCAGGCTGCAGTGAGCCGAGATCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACGTGATGTTCCGGTTTTaGTGCCTGGGTAAAAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHVMFRF*CLGKSL Trigger: TAAGCTTTTACCCAGGCATCAAAACCGGAACATCAC...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACAATGTCAATAGACCCTaGGGAAGAACCATTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHNVNRP*GRTIPD Trigger: GTCAGGAATGGTTCTTCCTCAGGGTCTATTGACATT...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCAGGAGAATTGCTTaGACCCCAGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGRRIA*TPEVEV Trigger: AACCTCCACCTCTGGGGTTCAAGCAATTCTCCTGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR GCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACAACAGGCTGCTTTTGTaGATCATCCTTTCTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHNRLLL*IILSPM Trigger: CATGGGAGAAAGGATGATGCACAAAAGCAGCCTGTT...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCCGAAATCACGCCACTaGACTCCAGCCTGGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHPKSRH*TPAWET Trigger: TGTTTCCCAGGCTGGAGTGCAGTGGCGTGATTTCGG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCCTGACCAAACCCCATaGAGAAACTGGGTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHPDQTP*RNWVQW Trigger: CCACTGCACCCAGTTTCTGCATGGGGTTTGGTCAGG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACTGCCTAGTGAGACTTTaGCCTGCGGAAAATCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHCLVRL*PAENLY Trigger: ATAGAGATTTTCCGCAGGCCAAAGTCTCACTAGGCA...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGCAGCCTGGACCTCCTaGGTTCAAGTGATCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHAAWTS*VQVILL Trigger: CAGAAGGATCACTTGAACCCAGGAGGTCCAGGCTGC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGTAATCTCAGTACTCTaGGCGGCCAAGGCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHVISVL*AAKAGG Trigger: TCCTCCTGCCTTGGCCGCCCAGAGTACTGAGATTAC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAGTAGCTGGGCTTGGTaGGCGTCTGTAATCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHSSWAW*ASVIPA Trigger: AGCTGGGATTACAGACGCCCACCAAGCCCAGCTACT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATACCCCATGCAGAAACTaGGTGCAGTGGCTCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHTPCRN*VQWLMP Trigger: AGGCATGAGCCACTGCACCCAGTTTCTGCATGGGGT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCTGTTTCCACAGACACTaGGAGTCATGTACATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RHEISDDVQDMNCRGRVCCFHRH*ESCTFF Trigger: GAAAAATGTACATGACTCTCAGTGTCTGTGGAAACA...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCTGTCTCTTCTACCAATaGGACTTTCCTTATAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RHEISDDVQDMNCRGRVCCLFYQ*DFPYRS Trigger: TGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACA...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCGGGTTTAATCCAAGCTaGTTTTTAACAGGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RHEISDDVQDMNCRGRVCGFNPS*FLTGCF Trigger: AAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCC...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCGGCTTTAATGCTAACTaGACACTCTGCCACATTAAT | + |
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Preference number: 4 (lower is better) Translates to: RHEISDDVQDMNCRGRVCGFNAN*TLCHIN Trigger: ATTAATGTGGCAGAGTGTTCAGTTAGCATTAAAGCC...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCAGGTGGATCACCTaGAGTCAGGAGTTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGRWIT*SQEFKH Trigger: GTGTTTGAACTCCTGACTTCAGGTGATCCACCTGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGACATGGATGGAGCTaGAAGCCATCGTTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGHGWS*KPSFSA Trigger: TGCTGAGAACGATGGCTTCCAGCTCCATCCATGTCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACATGACGTACAAGATATaGATTGTCGCGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHMTYKI*IVAEEF Trigger: AAACTCTTCCGCGACAATTCATATCTTGTACGTCAT...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594682.6 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCGTGATGTTCCGGTTTTaGTGCCTGGGTAAAAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIVMFRF*CLGKSL Trigger: TAAGCTTTTACCCAGGCATCAAAACCGGAACATCAC...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATACGGGGTTGTGTTGCTaGCCATGTCACTTGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHTGLCC*PCHLVI Trigger: GATTACCAAGTGACATGGTCAGCAACACAACCCCGT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCAGGAGGATACTTTaGGCCCAGGATTTTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGRRIL*AQDFET Trigger: AGTCTCAAAATCCTGGGCTCAAAGTATCCTCCTGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR CCA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCCTGGTTTTTATTGAGTaGATCTCTCACGACAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RHEISDDVQDMNCRGRVCLVFIE*ISHDKI Trigger: GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAG...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594682.6 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTCCTTTGTAGGGACATaGATGGAGCTGGAAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHSFVGT*MELEAI Trigger: GATGGCTTCCAGCTCCATCCATGTCCCTACAAAGGA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCCTTCAGAGTAGCTaGGATTACAGGTGCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGLQSS*DYRCTL Trigger: TAGTGTGCACCTGTAATCCCAGCTACTCTGAAGGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGTAGACCACGTGCGGTaGCTCTTTCCTGTAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHVDHVR*LFPVIS Trigger: TGAGATTACAGGAAAGAGCCACCGCACGTGGTCTAC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCACTGCACTCCAGCCTaGGAAACAACAGGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHHCTPA*ETTGKF Trigger: GAATTTCCCTGTTGTTTCCCAGGCTGGAGTGCAGTG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACATGATTAGTGAGGCTTaGACGCATACTAAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPMHVSSTNETFLIGHMISEA*THTKSF Trigger: AAAGCTTTTAGTATGCGTTCAAGCCTCACTAATCAT...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594682.6 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCTTGCCTGGTTTTTATTaGGTGGATCTCTCACGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKILPGFY*VDLSRQ Trigger: TTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAA...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGCCTGGGCTACATGGTaGAACTCCATCTCTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHAWATW*NSISTK Trigger: TTTAGTAGAGATGGAGTTTCACCATGTAGCCCAGGC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAAACATAGCCAGGCATaGAGGTACACGTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHKHSQA*RYTSVC Trigger: ACACACAGACGTGTACCTTCATGCCTGGCTATGTTT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTTAATCTCAGGGGTTTaGGATCAGCCTGGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHLISGV*DQPGQH Trigger: ATGTTGCCCAGGCTGATCTCAAACCCCTGAGATTAA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCTCAGTCTCCTAAAGTaGTGGGATTACAGGCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHLSLLK*WDYRRK Trigger: CTTACGCCTGTAATCCCAGCACTTTAGGAGACTGAG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAAAATTAGCTGGGCATaGTGGCATGTGACTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHKISWA*WHVTAV Trigger: GACTGCAGTCACATGCCACCATGCCCAGCTAATTTT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGGTGAGAGTAGCATaGGGACTGAGTACTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHMVRVA*GLSTVD Trigger: ATCCACAGTACTCAGTCCCCATGCTACTCTCACCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCTGTTTCCACAGACACTaGGAGTCATGTACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKICFHRH*ESCTFF Trigger: GAAAAATGTACATGACTCTCAGTGTCTGTGGAAACA...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCGGGTTTAATCCAAGCTaGTTTTTAACAGGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIGFNPS*FLTGCF Trigger: AAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCC...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCGGCTTTAATGCTAACTaGACACTCTGCCACATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIGFNAN*TLCHIN Trigger: ATTAATGTGGCAGAGTGTTCAGTTAGCATTAAAGCC...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAATGTCAATAGACCCTaGGGAAGAACCATTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHNVNRP*GRTIPD Trigger: GTCAGGAATGGTTCTTCCTCAGGGTCTATTGACATT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536937.5 ENST00000594682.6 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAGCAAGAGAATCGCATaGATCTGGGAAGCTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHSKRIA*IWEAEI Trigger: AATCTCAGCTTCCCAGATTCATGCGATTCTCTTGCT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR GCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCTCAAGCAATCTTCTTaGCTCAGTCTCCTAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHLKQSS*LSLLKC Trigger: GCACTTTAGGAGACTGAGGCAAGAAGATTGCTTGAG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGGGAGGGAGAACATTaGGAAAGATACCTAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGEGEH*ERYLMH Trigger: ATGCATTAGGTATCTTTCCCAATGTTCTCCCTCCCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAATACAAAAAGTAGCTaGGCTTGGTGGGCGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHNTKSS*AWWASV Trigger: TACAGACGCCCACCAAGCCCAGCTACTTTTTGTATT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCATGATTAGTGAGGCTTaGACGCATACTAAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIMISEA*THTKSF Trigger: AAAGCTTTTAGTATGCGTTCAAGCCTCACTAATCAT...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTTGCCTGGTTTTTATTaGGTGGATCTCTCACGACAA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHLPGFY*VDLSRQ Trigger: TTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR GCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCCAGATTCACTACATTTaGCTGGTTTTTATTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIQIHYI*LVFIEW Trigger: CCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR CCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCCTGGTTTTTATTGAGTaGATCTCTCACGACAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKILVFIE*ISHDKI Trigger: GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAG...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTGTTTCCACAGACACTaGGAGTCATGTACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHCFHRH*ESCTFF Trigger: GAAAAATGTACATGACTCTCAGTGTCTGTGGAAACA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTGTCTCTTCTACCAATaGGACTTTCCTTATAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHCLFYQ*DFPYRS Trigger: TGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGACGTACAAGATATaGATTGTCGCGGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHMTYKI*IVAEEF Trigger: AAACTCTTCCGCGACAATTCATATCTTGTACGTCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGCTTTAATGCTAACTaGACACTCTGCCACATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGFNAN*TLCHIN Trigger: ATTAATGTGGCAGAGTGTTCAGTTAGCATTAAAGCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGAGTACTGTGGATATTaGGGTGGTCAGAAATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHEYCGY*GGQKYK Trigger: TTTGTATTTCTGACCACCTCAATATCCACAGTACTC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR CCA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCTTCACTACATTTGCCTaGTTTTTATTGAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QIHYICLVFIEWISHDKIFTTFA*FLLSGS Trigger: AGATCCACTCAATAAAAACCAGGCAAATGTAGTGAA...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGAAACATGACATGTTaGAAGTTTTCTAGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHGNMTC*KFSRSP Trigger: TGGGGATCTAGAAAACTTCCAACATGTCATGTTTCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGATTAGTGAGGCTTaGACGCATACTAAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHMISEA*THTKSF Trigger: AAAGCTTTTAGTATGCGTTCAAGCCTCACTAATCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCTGGTTTTTATTGAGTaGATCTCTCACGACAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: EWISHDKIMNITLKGLLHLVFIE*ISHDKI Trigger: GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
||
| CDS TCA 90 bp | TCAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SGVAARACNHRHSAG*GRRIRQGGCSEPRW Trigger: CCATCTTGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGCCACGCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600714.5 ENST00000601257.5 |
||
| CDS TCA 90 bp | GCACTCAGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTaGGCCAAGATGGCAGCAGTACCGTCCAGCTTCGGCTCGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ALSRLRQENQAGRLQ*AKMAAVPSSFGSAS Trigger: TGATGCCGAGCCGAAGCTGGACGGTACTGCTGCCATCTTGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCTGAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600714.5 ENST00000601257.5 |
||
| CDS-3UTR CAA 90 bp | CGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCCCGTCTCCACCATCTGAAGCAAAAATCTaGTATGTCGTGGCTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RLGAGDQPGQHSESPSPPSEAKI*YVVAFM Trigger: CATGAAAGCCACGACATACAAGATTTTTGCTTCAGA...TGGTGGAGACGGGGATTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600714.5 |
||
| CDS TCA 90 bp | GAAAGGAATCATTTCAAGGGAGCTACAAGAACGGGGTTGTGTTGCTaGCCATGTCACTTGGTAATCCTTCCTAGACAGCGGTATGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERNHFKGATRTGLCC*PCHLVILPRQRYVH Trigger: GTGGACATACCGCTGTCTAGGAAGGATTACCAAGTGACATGGTCAGCAACACAACCCCGTTCTTGTAGCTCCCTTGAAATGATTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACATGCCTAGTGAGACTTaGGCCTGCGGAAAATCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ILSPMHVSSTNETFLIGHMPSET*ACGKSL Trigger: TAGAGATTTTCCGCAGGCCAAAGTCTCACTAGGCAT...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGCTGAGGCAGGAGAATaGCTTGAACCCCAGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHAEAGE*LEPQRW Trigger: CCACCTCTGGGGTTCAAGCAATTCTCCTGCCTCAGC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS TCA 90 bp | GCTTTTGTGCATCATCCTTTCTCCCATGCATGTCTCTTCTACCAATaGGACTTTCCTTATAGGTCACACGCACTCGCTTATAATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AFVHHPFSHACLFYQ*DFPYRSHALAYNVF Trigger: GAAGACATTATAAGCGAGTGCGTGTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGATGATGCACAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | CGGCATGAAATCTCTGATGACGTACAAGATATGAATTGTCGCGGAAGAGTTTGCTTTGCCTGGTTTTTATaGAGTGGATCTCTCACGACA | + |
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Preference number: 5 (lower is better) Translates to: RHEISDDVQDMNCRGRVCFAWFL*SGSLTT Trigger: TGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAA...GCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAGGCAGGAGAATTGCTaGAACCCCAGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHRQENC*NPRGGG Trigger: ACCTCCACCTCTGGGGTTCAAGCAATTCTCCTGCCT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATGGGGGTCTCACTATGTaGCCCAAGCTAGACTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHGGLTM*PKLDSN Trigger: GTTCGAGTCTAGCTTGGGCAACATAGTGAGACCCCC...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | ATCCTTTCTCCCATGCATGTCTCTTCTACCAATGAGACTTTCCTTATAGGTCACTCTGAAGCAAAAATCTaGTATGTCGTGGCTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: ILSPMHVSSTNETFLIGHSEAKI*YVVAFM Trigger: CATGAAAGCCACGACATACAAGATTTTTGCTTCAGA...GTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594682.6 |
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| CDS-3UTR CAA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCCGTACAAGATATGAATaGTCGCGGAAGAGTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QIHYICLVFIEWISHDKIRTRYE*SRKSLP Trigger: TGGCAAACTCTTCCGCGACAATTCATATCTTGTACG...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAAGAACGGGGTTGTGTaGCTGACCATGTCACTTGGT | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHKNGVV*LTMSLG Trigger: ACCAAGTGACATGGTCAGCAACACAACCCCGTTCTT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCTTAATCTCAGGGGTTaGAGATCAGCCTGGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHLNLRG*RSAWAT Trigger: TGTTGCCCAGGCTGATCTCAAACCCCTGAGATTAAG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCTTTGCCTGGTTTTTATaGAGTGGATCTCTCACGACA | + |
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Preference number: 5 (lower is better) Translates to: QIHYICLVFIEWISHDKIFAWFL*SGSLTT Trigger: TGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAA...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATAGGGGAGGGAGAACATaGGGAAAGATACCTAATGCA | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHRGGRT*GKIPNA Trigger: TGCATTAGGTATCTTTCCCAATGTTCTCCCTCCCCT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS-3UTR CAA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCTCTGAAGCAAAAATCTaGTATGTCGTGGCTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: QIHYICLVFIEWISHDKISEAKI*YVVAFM Trigger: CATGAAAGCCACGACATACAAGATTTTTGCTTCAGA...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTTTAACAGGCTGCTTTaGTGCATCATCCTTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHFNRLL*CIILSP Trigger: GGGAGAAAGGATGATGCACAAAAGCAGCCTGTTAAA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | CAGATTCACTACATTTGCCTGGTTTTTATTGAGTGGATCTCTCACGACAAAATCATGAATGATCAGATGTaGTACAAGGTAGGAATTGCG | + |
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Preference number: 5 (lower is better) Translates to: QIHYICLVFIEWISHDKIMNDQM*YKVGIA Trigger: CGCAATTCCTACCTTGTACAACATCTGATCATTCAT...GATTTTGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAATGTAGTGAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301096.7 ENST00000536937.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCGTACAAGATATGAATaGTCGCGGAAGAGTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHRTRYE*SRKSLP Trigger: TGGCAAACTCTTCCGCGACAATTCATATCTTGTACG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATACTCAAGCAATCTTCTaGCCTCAGTCTCCTAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHTQAIF*PQSPKV Trigger: CACTTTAGGAGACTGAGGCAAGAAGATTGCTTGAGT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATCAGCCTGCCAACATGTaGAAACCCTCTACTAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHQPANM*KPSTRN Trigger: ATTTCTAGTAGAGGGTTTCAACATGTTGGCAGGCTG...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTTTGCCTGGTTTTTATaGAGTGGATCTCTCACGACA | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHFAWFL*SGSLTT Trigger: TGTCGTGAGAGATCCACTCAATAAAAACCAGGCAAA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATTCTGAAGCAAAAATCTaGTATGTCGTGGCTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHSEAKI*YVVAFM Trigger: CATGAAAGCCACGACATACAAGATTTTTGCTTCAGA...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS-3UTR CAA 90 bp | GAGTGGATCTCTCACGACAAAATCATGAATATTACACTGAAAGGCTTATTACATATGAATGATCAGATGTaGTACAAGGTAGGAATTGCG | + |
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Preference number: 5 (lower is better) Translates to: EWISHDKIMNITLKGLLHMNDQM*YKVGIA Trigger: CGCAATTCCTACCTTGTACAACATCTGATCATTCAT...ATGTAATAAGCCTTTCAGTGTAATATTCATGATTTTGTCGTGAGAGATCCACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301096.7 ENST00000536937.5 ENST00000541777.6 ENST00000545872.1 ENST00000594682.6 ENST00000597597.1 |
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| CDS TCA 72 bp | GCGGCGCGCGCCTGCAATCACAGGCACTCAGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: AARACNHRHSAG*GRRIRQGGCSE Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCTGAGTGCCTGTGATTGCAGGCGCGCGCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600714.5 ENST00000601257.5 |
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| CDS TCA 72 bp | AGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTaGGCCAAGATGGCAGCAGTACCGTCCAGCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RLRQENQAGRLQ*AKMAAVPSSFG Trigger: GCCGAAGCTGGACGGTACTGCTGCCATCTTGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600714.5 ENST00000601257.5 |
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| CDS CCA 72 bp | AGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCAAGATaGCAGCAGTACCGTCCAGCTTCGGCTCGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: RRIRQGGCSEPR*QQYRPASARHQ Trigger: CTGATGCCGAGCCGAAGCTGGACGGTACTGCTGCCATCTTGGCTCACTGCAACCTCCCTGCCTGATTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600714.5 ENST00000601257.5 |
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| CDS TCA 72 bp | ACTAGCACTCTGAAAGGCCAAGGTGGGCAGATTGTTTaGCGTCAGGAGTTCGAGAGTAGCCTGGGCTACATG | + |
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Preference number: 6 (lower is better) Translates to: TSTLKGQGGQIV*RQEFESSLGYM Trigger: CATGTAGCCCAGGCTACTCTCGAACTCCTGACGTCAAACAATCTGCCCACCTTGGCCTTTCAGAGTGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597597.1 |
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| CDS TCA 72 bp | CATTTCAAGGGAGCTACAAGAACGGGGTTGTGTTGCTaGCCATGTCACTTGGTAATCCTTCCTAGACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: HFKGATRTGLCC*PCHLVILPRQR Trigger: CCGCTGTCTAGGAAGGATTACCAAGTGACATGGTCAGCAACACAACCCCGTTCTTGTAGCTCCCTTGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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| CDS TCA 72 bp | ACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTaGACGATTAGAACACATGGTCACAGGGAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TKHRMFSLISGS*TIRTHGHREGS Trigger: GCTTCCCTCCCTGTGACCATGTGTTCTAATCGTTCAACTCCCACTTATGAGTGAGAACATGCGGTGTTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541777.6 |
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