RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF81 (Homo sapiens)

Ensembl gene IDs: ENSG00000197779

Ensembl transcript IDs: ENST00000334937.8, ENST00000338637.13, ENST00000376950.4, ENST00000376954.6, ENST00000483520.1

Found 554 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGACAATTGGCAGGCTACTTGGTCTAAGGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGTGGTGGCTCCTCACCCCCGAGTAGG +
Preference number: 1 (lower is better)
Translates to: SDNWQATWSKGPQQG*LTTAPCGGSSPPSR
Trigger: CCTACTCGGGGGTGAGGAGCCACCACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCCCTTAGACCAAGTAGCCTGCCAATTGTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 90 bp TCCTTCCCTAGCACCTTCAGAGGGAGCATGACCCTGCTGACACCGTaGTTCGGATCTCCAGCCTCAAGAACAATGAGACAATTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: SFPSTFRGSMTLLTP*FGSPASRTMRQFLL
Trigger: CAGCAGAAATTGTCTCATTGTTCTTGAGGCTGGAGATCCGAATCACGGTGTCAGCAGGGTCATGCTCCCTCTGAAGGTGCTAGGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp CTGGTGGTAGACCTGGGGCTACTGTTGGTCAGCAGGGCTGGAAGATaGAAAGAAGGGCTGGATATAGAGTGGAAGATAGGAAAAACTGGA +
Preference number: 1 (lower is better)
Translates to: LVVDLGLLLVSRAGR*KEGLDIEWKIGKTG
Trigger: TCCAGTTTTTCCTATCTTCCACTCTATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTCTACCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp CAAGCATCTGGTGGTAGACCTGGGGCTACTGTTGGTCAGCAGGGCTaGAAGATGGAAAGAAGGGCTGGATATAGAGTGGAAGATAGGAAA +
Preference number: 1 (lower is better)
Translates to: QASGGRPGATVGQQG*KMERRAGYRVEDRK
Trigger: TTTCCTATCTTCCACTCTATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTCTACCACCAGATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp AGGCTTTTCCACACATGGGTTCAGGATTCCAAAGAGCTGCAAAAGTaGGCAAGCCTCATTGTGCAGGCACTTCTCAAGCCTCTGCTTGTA +
Preference number: 1 (lower is better)
Translates to: RLFHTWVQDSKELQK*ASLIVQALLKPLLV
Trigger: TACAAGCAGAGGCTTGAGAAGTGCCTGCACAATGAGGCTTGCCCACTTTTGCAGCTCTTTGGAATCCTGAACCCATGTGTGGAAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp CATAACGATTCTGAAATCCCACAGAGCAAATGTTGTCGGTTCCCTTaGCTCCAGGGGCAGATACGTTTCTTGATTAGGGCACAGTTCTCC +
Preference number: 1 (lower is better)
Translates to: HNDSEIPQSKCCRFP*LQGQIRFLIRAQFS
Trigger: GGAGAACTGTGCCCTAATCAAGAAACGTATCTGCCCCTGGAGCCAAGGGAACCGACAACATTTGCTCTGTGGGATTTCAGAATCGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 90 bp TATCTCAACTGGGATGGCTGGTCTTTGCTCCATTACTGCTCCATGTaGTCGCTCTCATTTTCCAACAGCACAGTTCAGGCTTTTCCACAC +
Preference number: 1 (lower is better)
Translates to: YLNWDGWSLLHYCSM*SLSFSNSTVQAFPH
Trigger: GTGTGGAAAAGCCTGAACTGTGCTGTTGGAAAATGAGAGCGATCACATGGAGCAGTAATGGAGCAAAGACCAGCCATCCCAGTTGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 90 bp CTGTTACTCCCTACATTTTCTTTAGATAGCTGGATGACACTAAGATaGCGGAAACAAGCTCTCAAATCCCACCTCAGTGTCCCAAGCACA +
Preference number: 1 (lower is better)
Translates to: LLLPTFSLDSWMTLR*RKQALKSHLSVPST
Trigger: TGTGCTTGGGACACTGAGGTGGGATTTGAGAGCTTGTTTCCGGCATCTTAGTGTCATCCAGCTATCTAAAGAAAATGTAGGGAGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp GAAGGGCTGGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTaGGTACCTCTGCATCTGTCCTTCACTGTCTCTAATTTCAAAGAC +
Preference number: 1 (lower is better)
Translates to: EGLDIEWKIGKTGTC*VPLHLSFTVSNFKD
Trigger: GTCTTTGAAATTAGAGACAGTGAAGGACAGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCCAGCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp AGCTTGAAATATAATAAAAGACAAGTGCCTCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGATGAGGCCACTATACAAGCAGTAAGA +
Preference number: 1 (lower is better)
Translates to: SLKYNKRQVPLLGHL*YSRKEDEATIQAVR
Trigger: TCTTACTGCTTGTATAGTGGCCTCATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAGAGGCACTTGTCTTTTATTATATTTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 90 bp AAACACTTGTTGGAAACACTGTTCTCTATGAGCCCCTTGCTCACCTaGTATGTTTTTACCTCTCTGGCTGCTCCTTCTCATTATCTTCTA +
Preference number: 1 (lower is better)
Translates to: KHLLETLFSMSPLLT*YVFTSLAAPSHYLL
Trigger: TAGAAGATAATGAGAAGGAGCAGCCAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAACAGTGTTTCCAACAAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 90 bp TCAGGGAAGCATAATAACTATGAGCATTATGGAATAAGGGATGCATaGACAATTTATAGAGGTAGCTGGGGAAGGTTTAGAAGGGGGAGT +
Preference number: 1 (lower is better)
Translates to: SGKHNNYEHYGIRDA*TIYRGSWGRFRRGS
Trigger: ACTCCCCCTTCTAAACCTTCCCCAGCTACCTCTATAAATTGTGCATGCATCCCTTATTCCATAATGCTCATAGTTATTATGCTTCCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 90 bp ACTTGGGATGGGAGGAATCTGTGGCTACTTTGCATTGTACCACAATaGAAGAAAACAAGATACTATGTCATGGAAACCAGTACGAATGAC +
Preference number: 1 (lower is better)
Translates to: TWDGRNLWLLCIVPQ*KKTRYYVMETSTND
Trigger: GTCATTCGTACTGGTTTCCATGACATAGTATCTTGTTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACAGATTCCTCCCATCCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 90 bp AGTAAGAATTCAACAAGAATTTTTAATGAATTGCTAAAGGCTGAGTaGGGGAGACTCATGAGAGCTGTAGACCTAAGGGTAGTTGGTCTC +
Preference number: 1 (lower is better)
Translates to: SKNSTRIFNELLKAE*GRLMRAVDLRVVGL
Trigger: GAGACCAACTACCCTTAGGTCTACAGCTCTCATGAGTCTCCCGCACTCAGCCTTTAGCAATTCATTAAAAATTCTTGTTGAATTCTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 90 bp AGTAAATTGGTAGAGCCAGGATTGAAACCCTGGCAGATGGGTTCCTaGGCCTATCTACCTAACCACTATGCAAACTATCTTTTAATATTT +
Preference number: 1 (lower is better)
Translates to: SKLVEPGLKPWQMGS*AYLPNHYANYLLIF
Trigger: AAATATTAAAAGATAGTTTGCATAGTGGTTAGGTAGATAGGCTCAGGAACCCATCTGCCAGGGTTTCAATCCTGGCTCTACCAATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 90 bp CCCAAACGACAGAATAATCTAGTCCAATGGCTTGATATTTTTCTATaGGAAAAATTGCTTCATGGTGAAGTAACACCACCTGAATTCAGA +
Preference number: 1 (lower is better)
Translates to: PKRQNNLVQWLDIFL*EKLLHGEVTPPEFR
Trigger: TCTGAATTCAGGTGGTGTTACTTCACCATGAAGCAATTTTTCTCATAGAAAAATATCAAGCCATTGGACTAGATTATTCTGTCGTTTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 90 bp TGTGAGCCTGCAGCCAAGCATCTGGTGGTAGACCTGGGGCTACTGTaGGTCAGCAGGGCTGGAAGATGGAAAGAAGGGCTGGATATAGAG +
Preference number: 2 (lower is better)
Translates to: CEPAAKHLVVDLGLL*VSRAGRWKEGLDIE
Trigger: CTCTATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTCTACCACCAGATGCTTGGCTGCAGGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 90 bp GTATGGCTCTTCTGGGCTAGGCTGGCTCAGCTGGGGCTAGAGGTCTaGGAAAACCTCACTCCCAATTCTGACAATTGGCAGGCTACTTGG +
Preference number: 2 (lower is better)
Translates to: VWLFWARLAQLGLEV*ENLTPNSDNWQATW
Trigger: CCAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGGTTTTCCAAGACCTCTAGCCCCAGCTGAGCCAGCCTAGCCCAGAAGAGCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHGPQQG*LTTAPC
Trigger: ACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCACTTGTCACGTTTTaGTCCACTATGCCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPLVTF*STMPPP
Trigger: GGGAGGGGGCATAGTGGACCAAAACGTGACAAGTGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGAAAGCCTACCTCCATaGGGTAGGCCTGCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASESLPP*GRPARG
Trigger: CCCCCTTGCAGGCCTACCCCATGGAGGTAGGCTTTC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGACAAGTGCCTCTCCTaGGCCATCTGTGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHDKCLS*AICGTA
Trigger: TGCTGTACCACAGATGGCCCAGGAGAGGCACTTGTC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 90 bp GGGAGACTCATGAGAGCTGTAGACCTAAGGGTAGTTGGTCTCTGCTaGCAGGCTCTTCTCCATAGTCATCCACTGAGTGCTCTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: GRLMRAVDLRVVGLC*QALLHSHPLSALKK
Trigger: TTTCTTGAGAGCACTCAGTGGATGACTATGGAGAAGAGCCTGCAAGCAGAGACCAACTACCCTTAGGTCTACAGCTCTCATGAGTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTGGGTGGAGAACTCATaGATGGGATTGGTGCCCTTA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHWVENS*MGLVPL
Trigger: TAAGGGCACCAATCCCATTCATGAGTTCTCCACCCA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCACTTGTCACGTTTTaGTCCACTATGCCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPLVTF*STMPPP
Trigger: GGGAGGGGGCATAGTGGACCAAAACGTGACAAGTGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTATCAGGTTCAGGTGTaGCTGAGGTTCCTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHYQVQV*LRFLGY
Trigger: GTACCCAAGGAACCTCAGCCACACCTGAACCTGATA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGCACAAAGCTCCAATaGAACCCTACTCCCCTACAG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGTKLQ*NPTPLQ
Trigger: CTGTAGGGGAGTAGGGTTTCATTGGAGCTTTGTGCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCACAGGGCTATCTCATaGTGTAGCAGCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASHRAIS*CSSRFP
Trigger: GGGAAACCTGCTGCTACATCATGAGATAGCCCTGTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTGCCTTGACCAAGACTaGATGCCTAGGATAGCTTCA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHCLDQD*MPRIAS
Trigger: TGAAGCTATCCTAGGCATGCAGTCTTGGTCAAGGCA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLLGHL*YSRKED
Trigger: ATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAGCAGGAAGGAAGATaGGGCCACTATACAAGCAGT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQQEGR*GHYTSS
Trigger: ACTGCTTGTATAGTGGCCTCATCTTCCTTCCTGCTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCATATGTCCAGCAGTTaGAAATCTGGTTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHHMSSS*KSGWCR
Trigger: CCTACACCAACCAGATTTTCAACTGCTGGACATATG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCATGAATGGGATTGGTaGCCTTATAAAAGGGATCCC +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHHEWDW*PYKRDP
Trigger: GGGATCCCTTTTATAAGGGCACCAATCCCATTCATG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGACGCTACTTGGGATaGGAGGAATCTGTGGCTACT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASRRYLG*EESVAT
Trigger: AGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACATCAGCTGGAATAACTaGTATGGCTCTTCTGGGCTA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHISWNN*YGSSGL
Trigger: TAGCCCAGAAGAGCCATACCAGTTATTCCAGCTGAT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGCAGGAAATCATCCTaGGCCCAGATCATTAAAGGC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGRKSS*AQIIKG
Trigger: GCCTTTAATGATCTGGGCCCAGGATGATTTCCTGCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTCAACTGGGATGGCTaGTCTTTGCTCCATTACTGC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLNWDG*SLLHYC
Trigger: GCAGTAATGGAGCAAAGACCAGCCATCCCAGTTGAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCACACAGAGGGAACATaGTGTGAAGAAACACAGGGA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASHTEGT*CEETQG
Trigger: TCCCTGTGTTTCTTCACATCATGTTCCCTCTGTGTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCACCACTGCTCCATGTaGTGGCTCCTCACCCCCGAG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIHHCSM*WLLTPE
Trigger: CTCGGGGGTGAGGAGCCACCACATGGAGCAGTGGTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCACCACTGCTCCATGTaGTGGCTCCTCACCCCCGAG +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYHHCSM*WLLTPE
Trigger: CTCGGGGGTGAGGAGCCACCACATGGAGCAGTGGTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCTATGAATCTGGTTTaGATCTACTCCTTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPMNLV*IYSFPQ
Trigger: TTGGGGAAAGGAGTAGATCCAAACCAGATTCATAGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAACTGTTTCAGTCCCTaGAAGTCCAACCTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNCFSP*KSNLEV
Trigger: TACCTCCAGGTTGGACTTCCAGGGACTGAAACAGTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAAAGAGCTGCAAAAGTaGGCAAGCCTCATTGTGCAG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASKELQK*ASLIVQ
Trigger: CTGCACAATGAGGCTTGCCCACTTTTGCAGCTCTTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGCCCCTTGCTCACCTaGTATGTTTTTACCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSPLLT*YVFTSL
Trigger: CAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTATGGGACAACGTCATaGAGATTTTTAGAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHYGTTS*RFLEAL
Trigger: AAGGGCTTCTAAAAATCTTCATGACGTTGTCCCATA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGACCGTGTTTGCATCTaGGTAACTTTCTCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDRVCI*VTFSAC
Trigger: ACAAGCTGAGAAAGTTACTCAGATGCAAACACGGTC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTCAGTTGCAGGGGTTaGAGAAATAGATTCTACCTC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLSCRG*RNRFYL
Trigger: GAGGTAGAATCTATTTCTTCAACCCCTGCAACTGAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTTCAAGGCAGGCTTTaGACACTTCTCAAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLQGRL*TLLKLL
Trigger: AAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCACCAAGTCTATGGTaGTTTATTATAGCAGCTCAA +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPPSLW*FIIAAQ
Trigger: TTGAGCTGCTATAATAAAGCACCATAGACTTGGTGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGPQQG*LTTAPC
Trigger: ACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTGGTATGGCTCTTCTaGGCTAGGCTGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLVWLF*ARLAQL
Trigger: CAGCTGAGCCAGCCTAGCCCAGAAGAGCCATACCAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTCAAAAGGGCAACCATaGCTGTTTCCAGGAATAATT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSKGQP*LFPGII
Trigger: AATTATTCCTGGAAACAGCCATGGTTGCCCTTTTGA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGAAAGCCTACCTCCATaGGGTAGGCCTGCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIESLPP*GRPARG
Trigger: CCCCCTTGCAGGCCTACCCCATGGAGGTAGGCTTTC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGATAGTAGGAGACCATaGAGACTGTCCAGACTTCTA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDSRRP*RLSRLL
Trigger: TAGAAGTCTGGACAGTCTCCATGGTCTCCTACTATC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTCAAGTGAGATAGCCTaGTGCTTTTCCTTATACAAT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSSEIA*CFSLYN
Trigger: ATTGTATAAGGAAAAGCATCAGGCTATCTCACTTGA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCAACCTTTGTTATTTaGGGAAAAACAGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPTFVI*GKTVFL
Trigger: GAGGAAAACTGTTTTTCCTCAAATAACAAAGGTTGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTGTGAGTTTCCTATaGATCTGGTTTGGATCTACT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFVSFL*IWFGST
Trigger: AGTAGATCCAAACCAGATTCATAGGAAACTCACAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGAAAATGCAAGAAGTaGGCAGTTTGCAACCTTGAA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGKCKK*AVCNLE
Trigger: TTCAAGGTTGCAAACTGCTCACTTCTTGCATTTTCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTATAGATTCTACCTCTTaGTGGGTGAAGTGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASIDSTS*WVKWQS
Trigger: ACTTTGCCACTTCACCCATCAAGAGGTAGAATCTAT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTCTGCTGTTTTAGGCTaGCCAATTTGTGGTACTTTG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSAVLG*PICGTL
Trigger: CAAAGTACCACAAATTGGGCAGCCTAAAACAGCAGA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTGGATGACACTAAGATaGCGGAAACAAGCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASWMTLR*RKQALK
Trigger: TTTGAGAGCTTGTTTCCGGCATCTTAGTGTCATCCA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTCACAGCAATAGTTaGTCCTTCCCTTTGACCTTC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFHSNS*SFPLTF
Trigger: GAAGGTCAAAGGGAAGGAGCAACTATTGCTGTGAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGCAAGCTGCAGAGATaGTTGTATGTTATGATCCCA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSKLQR*LYVMIP
Trigger: TGGGATCATAACATACAACCATCTCTGCAGCTTGCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACCTGGGGCTACTGTTaGTCAGCAGGGCTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTWGYC*SAGLED
Trigger: ATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGATGTGGGACTGCCATaGGAAGCTGGTGGAGAAGTC +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIDVGLP*EAGGEV
Trigger: GACTTCTCCACCAGCTTCTCATGGCAGTCCCACATC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTTCTGAATTCTGCTTaGCAAAGAAACAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLLNSA*QRNSYF
Trigger: GAAATAACTGTTTCTTTGGCAAGCAGAATTCAGAAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCACCAAGTCTATGGTaGTTTATTATAGCAGCTCAA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPPSLW*FIIAAQ
Trigger: TTGAGCTGCTATAATAAAGCACCATAGACTTGGTGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTGCTAATTTCCATTaGCCAAAGAAAGTCACGTGG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFANFH*PKKVTW
Trigger: CCACGTGACTTTCTTTGGCCAATGGAAATTAGCAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTCAAAAGGGCAACCATaGCTGTTTCCAGGAATAATT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSKGQP*LFPGII
Trigger: AATTATTCCTGGAAACAGCCATGGTTGCCCTTTTGA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGGAATTTTAAGTCTATaGTACAGCAAAGGTAACACT +
Preference number: 2 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHGILSL*YSKGNT
Trigger: AGTGTTACCTTTGCTGTACCATAGACTTAAAATTCC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCTCACTCCCAATTCTaGCAATTGGCAGGCTACTTG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPHSQF*QLAGYL
Trigger: CAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTAAAAGAAGCAAACTaGTACTTCCCATATTCTGCT +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLKEAN*YFPYSA
Trigger: AGCAGAATATGGGAAGTATCAGTTTGCTTCTTTTAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTTGGGTCTTCCCTCTaGGATGCCCTTCATTTTCCA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLGSSL*DALHFP
Trigger: TGGAAAATGAAGGGCATCTCAGAGGGAAGACCCAAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAAACACTGTTCTCTATaGGCCCCTTGCTCACCTGGT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHKHCSL*APCSPG
Trigger: ACCAGGTGAGCAAGGGGCTCATAGAGAACAGTGTTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTATTCAGAAATTCCTCTaGGTTTGCTCAATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASIQKFL*VCSIAL
Trigger: CAAAGCAATTGAGCAAACTCAGAGGAATTTCTGAAT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGGGTAGTTGGTCTCTaGTTGCAGGCTCTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHRVVGL*LQALLH
Trigger: ATGGAGAAGAGCCTGCAAGCAGAGACCAACTACCCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGGATGGCTGGTCTTTaGTCCATTACTGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGMAGL*SITAPC
Trigger: ACATGGAGCAGTAATGGAGCAAAGACCAGCCATCCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGACGCTACTTGGGATaGGAGGAATCTGTGGCTACT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHRRYLG*EESVAT
Trigger: AGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTACCCAATATATACAATaGTGGGATAGGTACAGGATA +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASTQYIQ*WDRYRI
Trigger: TATCCTGTACCTATCCCACCATTGTATATATTGGGT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGCAGGAAATCATCCTaGGCCCAGATCATTAAAGGC +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGRKSS*AQIIKG
Trigger: GCCTTTAATGATCTGGGCCCAGGATGATTTCCTGCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILLGHL*YSRKED
Trigger: ATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTCAACTGGGATGGCTaGTCTTTGCTCCATTACTGC +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLNWDG*SLLHYC
Trigger: GCAGTAATGGAGCAAAGACCAGCCATCCCAGTTGAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTCAAAAGATGCCTCTaGCTGAAGGTCCCTCATGAG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLKRCL*LKVPHE
Trigger: CTCATGAGGGACCTTCAGCCAGAGGCATCTTTTGAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGTAGTTGTTTGGGATaGCTGGGATGGATGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGSCLG*LGWMAE
Trigger: TTCTGCCATCCATCCCAGCCATCCCAAACAACTACC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGTTGGTCAGCAGGGCTaGAAGATGGAAAGAAGGGCT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIVGQQG*KMERRA
Trigger: AGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAAC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 90 bp AAAGAGACGCTACTTGGGATGGGAGGAATCTGTGGCTACTTTGCATaGTACCACAATGAAAGAAAACAAGATACTATGTCATGGAAACCA +
Preference number: 2 (lower is better)
Translates to: KETLLGMGGICGYFA*YHNERKQDTMSWKP
Trigger: TGGTTTCCATGACATAGTATCTTGTTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCTCACTCCCAATTCTaGCAATTGGCAGGCTACTTG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPHSQF*QLAGYL
Trigger: CAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTGGGTGGAGAACTCATaGATGGGATTGGTGCCCTTA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIWVENS*MGLVPL
Trigger: TAAGGGCACCAATCCCATTCATGAGTTCTCCACCCA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAGCAGGAAGGAAGATaGGGCCACTATACAAGCAGT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQQEGR*GHYTSS
Trigger: ACTGCTTGTATAGTGGCCTCATCTTCCTTCCTGCTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAAAGATGCCTCTGGCTaGAGGTCCCTCATGAGTCAA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIKDASG*RSLMSQ
Trigger: TTGACTCATGAGGGACCTTCAGCCAGAGGCATCTTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCACACAGAGGGAACATaGTGTGAAGAAACACAGGGA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHHTEGT*CEETQG
Trigger: TCCCTGTGTTTCTTCACATCATGTTCCCTCTGTGTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTGCGGGCTCAGGAAGTaGGGTGTATCTAATACCCAT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWICGLRK*GVSNTH
Trigger: ATGGGTATTAGATACACCTCACTTCCTGAGCCCGCA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTAAACCAGCCCTTTTaGGACATTAGCATGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLNQPF*DISMGG
Trigger: TCCACCCATGCTAATGTCTCAAAAGGGCTGGTTTAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTTCTGAATTCTGCTTaGCAAAGAAACAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLLNSA*QRNSYF
Trigger: GAAATAACTGTTTCTTTGGCAAGCAGAATTCAGAAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGGATTCCAAAGAGCTaGAAAAGTGGGCAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHRIPKS*KSGQAS
Trigger: TGAGGCTTGCCCACTTTTGCAGCTCTTTGGAATCCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTGCCTTGACCAAGACTaGATGCCTAGGATAGCTTCA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHCLDQD*MPRIAS
Trigger: TGAAGCTATCCTAGGCATGCAGTCTTGGTCAAGGCA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCGAGGAAAGAAATATaGTTCTTAGTCAAATCTATG +
Preference number: 2 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPRKEI*FLVKSM
Trigger: CATAGATTTGACTAAGAAGCATATTTCTTTCCTCGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCAAAGAGACGCTACTTaGGATGGGAGGAATCTGTGG +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYQRDAT*DGRNLW
Trigger: CCACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAAAGAGACGCTACTTaGGATGGGAGGAATCTGTGG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQRDAT*DGRNLW
Trigger: CCACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATCAGGTTCAGGTGTaGCTGAGGTTCCTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYQVQV*LRFLGY
Trigger: GTACCCAAGGAACCTCAGCCACACCTGAACCTGATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAAAGAGCTGCAAAAGTaGGCAAGCCTCATTGTGCAG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHKELQK*ASLIVQ
Trigger: CTGCACAATGAGGCTTGCCCACTTTTGCAGCTCTTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGCAGGGCTGGAAGATaGAAAGAAGGGCTGGATATA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSRAGR*KEGLDI
Trigger: TATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGCCACTTTTCATTTTaGACTGTTTCAGTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGHFSF*TVSVPG
Trigger: TCCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAACCTTGCTAGATTCTaGTCTCAGACTTCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINLARF*SQTSRL
Trigger: GAGCCTGGAAGTCTGAGATCAGAATCTAGCAAGGTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCATATGTCCAGCAGTTaGAAATCTGGTTGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHHMSSS*KSGWCR
Trigger: CCTACACCAACCAGATTTTCAACTGCTGGACATATG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTCTGCACTGTGTTCTaGCACAAACACCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFCTVF*HKHPME
Trigger: TTCCATAGGGTGTTTGTGGCAGAACACAGTGCAGAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTTCAAGGCAGGCTTTaGACACTTCTCAAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLQGRL*TLLKLL
Trigger: AAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTGCAGCAAACCCTGTTaGCCTCAGGACACAGTTAAA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWICSKPC*PQDTVK
Trigger: TTTAACTGTGTCCTGAGGGCAACAGGGTTTGCTGCA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGGATTCCAAAGAGCTaGAAAAGTGGGCAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIRIPKS*KSGQAS
Trigger: TGAGGCTTGCCCACTTTTGCAGCTCTTTGGAATCCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATCAGCTGGAATAACTaGTATGGCTCTTCTGGGCTA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHISWNN*YGSSGL
Trigger: TAGCCCAGAAGAGCCATACCAGTTATTCCAGCTGAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAACTGTTTCAGTCCCTaGAAGTCCAACCTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINCFSP*KSNLEV
Trigger: TACCTCCAGGTTGGACTTCCAGGGACTGAAACAGTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCAAAGTTCACTCATGTaGACCTTTCCACAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHQSSLM*TFPQGY
Trigger: ATAGCCCTGTGGAAAGGTCCACATGAGTGAACTTTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCAGTTAGCTTTTTGCTaGGTTGTTATCATGCTGCCC +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHQLAFC*VVIMLP
Trigger: GGGCAGCATGATAACAACCCAGCAAAAAGCTAACTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGGCTGCCCAATTTGTaGTACTTTGTTATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHRLPNL*YFVIAA
Trigger: GGCTGCTATAACAAAGTACCACAAATTGGGCAGCCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGTTGCTCCTTCCCTTTaGCCTTCCAAATCTCATGTA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIVAPSL*PSKSHV
Trigger: TACATGAGATTTGGAAGGTCAAAGGGAAGGAGCAAC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTTCTGCACTGTGTTCTaGCACAAACACCCTATGGAA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIFCTVF*HKHPME
Trigger: TTCCATAGGGTGTTTGTGGCAGAACACAGTGCAGAA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGAGATTCTTCAGGTTTaGAAAGAGCAGCAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIEILQV*KEQQER
Trigger: CCTCTCTTGCTGCTCTTTGCAAACCTGAAGAATCTC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCAAAGAAAGTCACGTaGCCAAGTTCAAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPKKVT*PSSKSS
Trigger: ACTTGACTTTGAACTTGGCCACGTGACTTTCTTTGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGTGGCTGAGGTTCCTTaGGTACAGTTTTTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIVAEVP*VQFFSF
Trigger: GAAACTGAAAAACTGTACCCAAGGAACCTCAGCCAC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTCTCATCCAAAATTGTaGCATCAAGCTCCAATCCAG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSHPKL*HQAPIQ
Trigger: CTGGATTGGAGCTTGATGCCACAATTTTGGATGAGA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGGCTTTTCCACACATaGGTTCAGGATTCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIRLFHT*VQDSKE
Trigger: CTCTTTGGAATCCTGAACCCATGTGTGGAAAAGCCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGCAAGCACCCAAAATaGAAGCCACAGTCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSKHPK*KPQSFC
Trigger: ACAAAAAGACTGTGGCTTCCATTTTGGGTGCTTGCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATTTATAGAGGTAGCTaGGGAAGGTTTAGAAGGGGG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIIYRGS*GRFRRG
Trigger: CCCCCTTCTAAACCTTCCCCAGCTACCTCTATAAAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCAGCCTCAAGAACAATaGGACAATTTCTGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHQPQEQ*DNFCCF
Trigger: AAAACAGCAGAAATTGTCTCATTGTTCTTGAGGCTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATATTCCTCCTGTTCTaGACTGTGTTCTGCCACAAA +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYIFLLF*TVFCHK
Trigger: TTTGTGGCAGAACACAGTGCAGAACAGGAGGAATAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACTCCTTTCCCCAAATaGCACATCAGCAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTPFPK*HISNSF
Trigger: AAAAGAATTGCTGATGTGGCATTTGGGGAAAGGAGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAACTGGGGGAGGATATaGTTCAAAGTTCACTCATGT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINWGRI*FKVHSC
Trigger: ACATGAGTGAACTTTGAAGCATATCCTCCCCCAGTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTTTACCTCTCTGGCTaGTCCTTCTCATTATCTTCT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFYLSG*SFSLSS
Trigger: AGAAGATAATGAGAAGGAGCAGCCAGAGAGGTAAAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCAAAGAAAGTCACGTaGCCAAGTTCAAAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPKKVT*PSSKSS
Trigger: ACTTGACTTTGAACTTGGCCACGTGACTTTCTTTGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCTATGAATCTGGTTTaGATCTACTCCTTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPMNLV*IYSFPQ
Trigger: TTGGGGAAAGGAGTAGATCCAAACCAGATTCATAGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTCTCATCCAAAATTGTaGCATCAAGCTCCAATCCAG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWISHPKL*HQAPIQ
Trigger: CTGGATTGGAGCTTGATGCCACAATTTTGGATGAGA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACTCATGAATGGGATTaGTGCCCTTATAAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTHEWD*CPYKRD
Trigger: ATCCCTTTTATAAGGGCACCAATCCCATTCATGAGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGGCTGGATATAGAGTaGAAGATAGGAAAAACTGGA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGLDIE*KIGKTG
Trigger: TCCAGTTTTTCCTATCTTCCACTCTATATCCAGCCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTCAAGTGAGATAGCCTaGTGCTTTTCCTTATACAAT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSSEIA*CFSLYN
Trigger: ATTGTATAAGGAAAAGCATCAGGCTATCTCACTTGA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCTAACACACCAAACTaGCAACATTTTTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPNTPN*QHFSQY
Trigger: ATACTGGGAAAAATGTTGTCAGTTTGGTGTGTTAGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCTAACACACCAAACTaGCAACATTTTTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPNTPN*QHFSQY
Trigger: ATACTGGGAAAAATGTTGTCAGTTTGGTGTGTTAGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGAAACCAGTACGAATaGCAGGATTATATTTGTGTG +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGNQYE*QDYICV
Trigger: CACACAAATATAATCCTGTCATTCGTACTGGTTTCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTAAAAGAAGCAAACTaGTACTTCCCATATTCTGCT +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLKEAN*YFPYSA
Trigger: AGCAGAATATGGGAAGTATCAGTTTGCTTCTTTTAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTTACAGACACAACCATaGTTTGATCTTTACCCTGAG +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILQTQP*FDLYPE
Trigger: CTCAGGGTAAAGATCAAATCATGGTTGTGTCTGTAA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATGGGACAACGTCATaGAGATTTTTAGAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYGTTS*RFLEAL
Trigger: AAGGGCTTCTAAAAATCTTCATGACGTTGTCCCATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTACATCTTTTATAGATaGAAACCATCAGGACAGAGG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHYIFYR*KPSGQR
Trigger: CCTCTGTCCTGATGGTTTTCATCTATAAAAGATGTA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCACTCCTTTCCCCAAATaGCACATCAGCAATTCTTTT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWITPFPK*HISNSF
Trigger: AAAAGAATTGCTGATGTGGCATTTGGGGAAAGGAGT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGGTTGTTATCATGCTaGCCAAAACTTAGTGACTTA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGLLSC*PKLSDL
Trigger: TAAGTCACTAAGTTTTGGGCAGCATGATAACAACCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTTTTACCTCTCTGGCTaGTCCTTCTCATTATCTTCT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIFYLSG*SFSLSS
Trigger: AGAAGATAATGAGAAGGAGCAGCCAGAGAGGTAAAA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTTATTAACCTGGAATaGAACCAAATCTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFINLE*NQIFSG
Trigger: CCCAGAGAAGATTTGGTTGCATTCCAGGTTAATAAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTTTGCTAATTTCCATTaGCCAAAGAAAGTCACGTGG +
Preference number: 2 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYFANFH*PKKVTW
Trigger: CCACGTGACTTTCTTTGGCCAATGGAAATTAGCAAA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACCCAATATATACAATaGTGGGATAGGTACAGGATA +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTQYIQ*WDRYRI
Trigger: TATCCTGTACCTATCCCACCATTGTATATATTGGGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAAGCCACCAAGTCTATaGTGCTTTATTATAGCAGCT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIKPPSL*CFIIAA
Trigger: AGCTGCTATAATAAAGCACCATAGACTTGGTGGCTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCACTCATGAATGGGATTaGTGCCCTTATAAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWITHEWD*CPYKRD
Trigger: ATCCCTTTTATAAGGGCACCAATCCCATTCATGAGT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCAACCTTTGTTATTTaGGGAAAAACAGTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPTFVI*GKTVFL
Trigger: GAGGAAAACTGTTTTTCCTCAAATAACAAAGGTTGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATTTCATGAGGCTGTaGAAATTCTCTCTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYFMRL*KFSLLQ
Trigger: TTGAAGGAGAGAGAATTTGCACAGCCTCATGAAATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTATTTCATGAGGCTGTaGAAATTCTCTCTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFYFMRL*KFSLLQ
Trigger: TTGAAGGAGAGAGAATTTGCACAGCCTCATGAAATA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAACATTTATTGTCTTaGAGTTTCTATGGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQHLLS*SFYGSG
Trigger: TCCTGACCCATAGAAACTGCAAGACAATAAATGTTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAAGATACTATGTCATaGAAACCAGTACGAATGACA +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQDTMS*KPVRMT
Trigger: TGTCATTCGTACTGGTTTCCATGACATAGTATCTTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAAAATAAAAATTCTCTaGGCAAACCAGTGCCTACCT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIKIKIL*ANQCLP
Trigger: AGGTAGGCACTGGTTTGCCCAGAGAATTTTTATTTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATGAGTCAAGCTATCTaGCTTACAGTCAAGCTATTT +
Preference number: 2 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIMSQAI*LTVKLF
Trigger: AAATAGCTTGACTGTAAGCCAGATAGCTTGACTCAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACAATGGGAGAAATTTaGAAATGGACTGGATATATC +
Preference number: 2 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTMGEI*KWTGYI
Trigger: GATATATCCAGTCCATTTCCAAATTTCTCCCATTGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp TGGCAGGCTACTTGGTCTAAGGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGTGGTGGCTCCTCACCC +
Preference number: 3 (lower is better)
Translates to: WQATWSKGPQQG*LTTAPCGGSSP
Trigger: GGGTGAGGAGCCACCACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCCCTTAGACCAAGTAGCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TGTGGGACTGCCATGAGAAGCTGGTGGAGAAGTCCATaGGAAGCTTTTGTGAGCCTGCAGCCAAGCATCTGG +
Preference number: 3 (lower is better)
Translates to: CGTAMRSWWRSP*EAFVSLQPSIW
Trigger: CCAGATGCTTGGCTGCAGGCTCACAAAAGCTTCTCATGGACTTCTCCACCAGCTTCTCATGGCAGTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp AACCTCACTCCCAATTCTGACAATTGGCAGGCTACTTaGTCTAAGGGGCCTCAGCAAGGCTGGCTCACCACT +
Preference number: 3 (lower is better)
Translates to: NLTPNSDNWQAT*SKGPQQGWLTT
Trigger: AGTGGTGAGCCAGCCTTGCTGAGGCCCCTTAGACCAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp TTCCAGTTTCTACGTGCCACTCAGACCCAAAGCCAATaGCACTTGTCACGTTTTGGTCCACTATGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: FQFLRATQTQSQ*HLSRFGPLCPL
Trigger: GAGGGGGCATAGTGGACCAAAACGTGACAAGTGGCATTGGCTTTGGGTCTGAGTGGCACGTAGAAACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp GAGGTCTTGGAAAACCTCACTCCCAATTCTGACAATTaGCAGGCTACTTGGTCTAAGGGGCCTCAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: EVLENLTPNSDN*QATWSKGPQQG
Trigger: GCCTTGCTGAGGCCCCTTAGACCAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGGTTTTCCAAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp GTCTCTGCTTGCAGGCTCTTCTCCATAGTCATCCACTaGGTGCTCTCAAGAAACACGGGGACAAGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: VSACRLFSIVIH*VLSRNTGTRKK
Trigger: CTTCTTCCTTGTCCCCGTGTTTCTTGAGAGCACTCAGTGGATGACTATGGAGAAGAGCCTGCAAGCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCAGGAAAATCTGAGAAGCCAGGCACATCTAGCTGCTaGTGTGGGACTGCCATGAGAAGCTGGTGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: SGKSEKPGTSSC*CGTAMRSWWRS
Trigger: ACTTCTCCACCAGCTTCTCATGGCAGTCCCACATCAGCAGCTAGATGTGCCTGGCTTCTCAGATTTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp CACACATGGGTTCAGGATTCCAAAGAGCTGCAAAAGTaGGCAAGCCTCATTGTGCAGGCACTTCTCAAGCCT +
Preference number: 3 (lower is better)
Translates to: HTWVQDSKELQK*ASLIVQALLKP
Trigger: AGGCTTGAGAAGTGCCTGCACAATGAGGCTTGCCCACTTTTGCAGCTCTTTGGAATCCTGAACCCATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TGGGATGGCTGGTCTTTGCTCCATTACTGCTCCATGTaGTCGCTCTCATTTTCCAACAGCACAGTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: WDGWSLLHYCSM*SLSFSNSTVQA
Trigger: AGCCTGAACTGTGCTGTTGGAAAATGAGAGCGATCACATGGAGCAGTAATGGAGCAAAGACCAGCCATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp CTCATGAGAGCTGTAGACCTAAGGGTAGTTGGTCTCTaGTTGCAGGCTCTTCTCCATAGTCATCCACTGAGT +
Preference number: 3 (lower is better)
Translates to: LMRAVDLRVVGL*LQALLHSHPLS
Trigger: ACTCAGTGGATGACTATGGAGAAGAGCCTGCAAGCAGAGACCAACTACCCTTAGGTCTACAGCTCTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp TCTGAAATCCCACAGAGCAAATGTTGTCGGTTCCCTTaGCTCCAGGGGCAGATACGTTTCTTGATTAGGGCA +
Preference number: 3 (lower is better)
Translates to: SEIPQSKCCRFP*LQGQIRFLIRA
Trigger: TGCCCTAATCAAGAAACGTATCTGCCCCTGGAGCCAAGGGAACCGACAACATTTGCTCTGTGGGATTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTGGTAGAGCCAGGATaGAAACCCTGGCAGATGGGT +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLVEPG*KPWQMG
Trigger: ACCCATCTGCCAGGGTTTCAATCCTGGCTCTACCAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp GTCAGGAATTCGTATGGCTCAAAAGATGCCTCTGGCTaGAGGTCCCTCATGAGTCAAGCTATCTGGCTTACA +
Preference number: 3 (lower is better)
Translates to: VRNSYGSKDASG*RSLMSQAIWLT
Trigger: TGTAAGCCAGATAGCTTGACTCATGAGGGACCTTCAGCCAGAGGCATCTTTTGAGCCATACGAATTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGCTTCAAGGCAGGCTTaGCACACTTCTCAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASASRQA*HTSQAS
Trigger: AGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAGC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTATTCTGGTAGTTGTTaGGGATGGCTGGGATGGATG +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASYSGSC*GWLGWM
Trigger: CATCCATCCCAGCCATCCCAAACAACTACCAGAATA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGACCTGGGGCTACTGTaGGTCAGCAGGGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHDLGLL*VSRAGR
Trigger: TCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCTCCTGGGCCATCTGTGGTACAGCAGGAAGGAAGATaGGGCCACTATACAAGCAGTAAGAATTCAACAAGA +
Preference number: 3 (lower is better)
Translates to: SPGPSVVQQEGR*GHYTSSKNSTR
Trigger: TCTTGTTGAATTCTTACTGCTTGTATAGTGGCCTCATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp ATGGCTCAAAAGATGCCTCTGGCTGAAGGTCCCTCATaGGTCAAGCTATCTGGCTTACAGTCAAGCTATTTG +
Preference number: 3 (lower is better)
Translates to: MAQKMPLAEGPS*VKLSGLQSSYL
Trigger: CAAATAGCTTGACTGTAAGCCAGATAGCTTGACTCATGAGGGACCTTCAGCCAGAGGCATCTTTTGAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp GTAGAGCCAGGATTGAAACCCTGGCAGATGGGTTCCTaGGCCTATCTACCTAACCACTATGCAAACTATCTT +
Preference number: 3 (lower is better)
Translates to: VEPGLKPWQMGS*AYLPNHYANYL
Trigger: AAGATAGTTTGCATAGTGGTTAGGTAGATAGGCTCAGGAACCCATCTGCCAGGGTTTCAATCCTGGCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp TTGGAAACACTGTTCTCTATGAGCCCCTTGCTCACCTaGTATGTTTTTACCTCTCTGGCTGCTCCTTCTCAT +
Preference number: 3 (lower is better)
Translates to: LETLFSMSPLLT*YVFTSLAAPSH
Trigger: ATGAGAAGGAGCAGCCAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAACAGTGTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGAATTTTTAATGAATaGCTAAAGGCTGAGTGCGGG +
Preference number: 3 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHRIFNE*LKAECG
Trigger: CCCGCACTCAGCCTTTAGCAATTCATTAAAAATTCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGTTGCTCCTTCCCTTaGACCTTCCAAATCTCATGT +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSCSFP*TFQISC
Trigger: ACATGAGATTTGGAAGGTCAAAGGGAAGGAGCAACT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp ACTGGCAACAAAGAAACACAAACTCAGCCCAACTCCTaGTTAGATGGATTCAATCTCCCCATGCTAATGGCC +
Preference number: 3 (lower is better)
Translates to: TGNKETQTQPNS*LDGFNLPMLMA
Trigger: GGCCATTAGCATGGGGAGATTGAATCCATCTAATCAGGAGTTGGGCTGAGTTTGTGTTTCTTTGTTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCAGTTGCAGGGGTTGAAGAAATAGATTCTACCTCTTaGTGGGTGAAGTGGCAAAGTCACACTGAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: SVAGVEEIDSTS*WVKWQSHTEKG
Trigger: GCCCTTTTCAGTGTGACTTTGCCACTTCACCCATCAAGAGGTAGAATCTATTTCTTCAACCCCTGCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp AGAGCAGCAAGAGAGGGTAAGCTTCAAGGCAGGCTTTaGACACTTCTCAAGCTTCTTATTGATTCTCTTTGC +
Preference number: 3 (lower is better)
Translates to: RAAREGKLQGRL*TLLKLLIDSLC
Trigger: GCAAAGAGAATCAATAAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAGCTTACCCTCTCTTGCTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp TATAATAAAAGACAAGTGCCTCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGATGAGGCCACTATACAA +
Preference number: 3 (lower is better)
Translates to: YNKRQVPLLGHL*YSRKEDEATIQ
Trigger: TTGTATAGTGGCCTCATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAGAGGCACTTGTCTTTTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGCCACTTGTCACGTTTaGGTCCACTATGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYATCHV*VHYAPS
Trigger: GGAGGGGGCATAGTGGACCAAAACGTGACAAGTGGC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGCCACTTGTCACGTTTaGGTCCACTATGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIATCHV*VHYAPS
Trigger: GGAGGGGGCATAGTGGACCAAAACGTGACAAGTGGC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGCTCATTTTAATATATaGTTCTTGGGTCTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHAHFNI*FLGLPS
Trigger: AGAGGGAAGACCCAAGAACAATATATTAAAATGAGC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATGTTGTCGGTTCCCTaGGCTCCAGGGGCAGATACG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIMLSVP*APGADT
Trigger: CGTATCTGCCCCTGGAGCCAAGGGAACCGACAACAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGAGCAGTTTGCAACCTaGAAGAGGGCCGTCACCAAG +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHEQFAT*KRAVTK
Trigger: CTTGGTGACGGCCCTCTTCAAGGTTGCAAACTGCTC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAATAGATTCTACCTCTaGATGGGTGAAGTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNRFYL*MGEVAK
Trigger: CTTTGCCACTTCACCCATCAAGAGGTAGAATCTATT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp CCTACATTTTCTTTAGATAGCTGGATGACACTAAGATaGCGGAAACAAGCTCTCAAATCCCACCTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: PTFSLDSWMTLR*RKQALKSHLSV
Trigger: GACACTGAGGTGGGATTTGAGAGCTTGTTTCCGGCATCTTAGTGTCATCCAGCTATCTAAAGAAAATGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp TCCAGAATCTCAAGTCTTCTGTATCAGGTTCAGGTGTaGCTGAGGTTCCTTGGGTACAGTTTTTCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: SRISSLLYQVQV*LRFLGYSFSVS
Trigger: AGAAACTGAAAAACTGTACCCAAGGAACCTCAGCCACACCTGAACCTGATACAGAAGACTTGAGATTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp ATTATTCTGGTAGTTGTTTGGGATGGCTGGGATGGATaGCAGAACCTTCCTAATCTGGGCCAGTGTATTATT +
Preference number: 3 (lower is better)
Translates to: IILVVVWDGWDG*QNLPNLGQCII
Trigger: AATAATACACTGGCCCAGATTAGGAAGGTTCTGCCATCCATCCCAGCCATCCCAAACAACTACCAGAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGAATTTTTAATGAATaGCTAAAGGCTGAGTGCGGG +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASRIFNE*LKAECG
Trigger: CCCGCACTCAGCCTTTAGCAATTCATTAAAAATTCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCAGCCAAAGTTGCCTaGACCAAGACTGCATGCCTA +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPAKVA*TKTACL
Trigger: TAGGCATGCAGTCTTGGTCAAGGCAACTTTGGCTGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGTATCAGTTAGCTTTTaGCTGGGTTGTTATCATGCT +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASVSVSF*LGCYHA
Trigger: AGCATGATAACAACCCAGCAAAAAGCTAACTGATAC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTAGGCTGCCCAATTaGTGGTACTTTGTTATAGCA +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFRLPN*WYFVIA
Trigger: TGCTATAACAAAGTACCACAAATTGGGCAGCCTAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTATAAAAGGGGAAATTaGGAAAGAGAGCCAGACACA +
Preference number: 3 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASYKRGN*EREPDT
Trigger: TGTGTCTGGCTCTCTTTCCAAATTTCCCCTTTTATA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp GAATCTCAAGTCTTCTGTATCAGGTTCAGGTGTGGCTaGGGTTCCTTGGGTACAGTTTTTCAGTTTCTTGAT +
Preference number: 3 (lower is better)
Translates to: ESQVFCIRFRCG*GSLGTVFQFLD
Trigger: ATCAAGAAACTGAAAAACTGTACCCAAGGAACCTCAGCCACACCTGAACCTGATACAGAAGACTTGAGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp AGTTCAAAGTCAAGTAGTAGACAAAGAGACGCTACTTaGGATGGGAGGAATCTGTGGCTACTTTGCATTGTA +
Preference number: 3 (lower is better)
Translates to: SSKSSSRQRDAT*DGRNLWLLCIV
Trigger: TACAATGCAAAGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTGTCTACTACTTGACTTTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATACAAAGAGACGCTACTaGGGATGGGAGGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHTKRRY*GWEESV
Trigger: CACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTGT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCTGGGGCTAGAGGTCTaGGAAAACCTCACTCCCAAT +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILGLEV*ENLTPN
Trigger: ATTGGGAGTGAGGTTTTCCAAGACCTCTAGCCCCAG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCTGGGGCTAGAGGTCTaGGAAAACCTCACTCCCAAT +
Preference number: 3 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYLGLEV*ENLTPN
Trigger: ATTGGGAGTGAGGTTTTCCAAGACCTCTAGCCCCAG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTGGGATGGCTGGTCTTaGCTCCATTACTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIWDGWS*LHYCSM
Trigger: CATGGAGCAGTAATGGAGCAAAGACCAGCCATCCCA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp TCAACAAGAATTTTTAATGAATTGCTAAAGGCTGAGTaGGGGAGACTCATGAGAGCTGTAGACCTAAGGGTA +
Preference number: 3 (lower is better)
Translates to: STRIFNELLKAE*GRLMRAVDLRV
Trigger: TACCCTTAGGTCTACAGCTCTCATGAGTCTCCCGCACTCAGCCTTTAGCAATTCATTAAAAATTCTTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CCA 72 bp CTATTCCAGGACCTCCAAATTTCTCATCCAAAATTGTaGCATCAAGCTCCAATCCAGAATCTCAAGTCTTCT +
Preference number: 3 (lower is better)
Translates to: LFQDLQISHPKL*HQAPIQNLKSS
Trigger: AGAAGACTTGAGATTCTGGATTGGAGCTTGATGCCACAATTTTGGATGAGAAATTTGGAGGTCCTGGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCACAAAGAGACGCTACTaGGGATGGGAGGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWITKRRY*GWEESV
Trigger: CACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTGT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGCTTCAAGGCAGGCTTaGCACACTTCTCAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIASRQA*HTSQAS
Trigger: AGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAGC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGATCCACCAGTTCGTTaGGTCCATTCTCTATCTTCC +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHDPPVR*VHSLSS
Trigger: GGAAGATAGAGAATGGACCAAACGAACTGGTGGATC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGTAGTTGGTCTCTGCTaGCAGGCTCTTCTCCATAGT +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIVVGLC*QALLHS
Trigger: ACTATGGAGAAGAGCCTGCAAGCAGAGACCAACTAC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGATCCACCAGTTCGTTaGGTCCATTCTCTATCTTCC +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIDPPVR*VHSLSS
Trigger: GGAAGATAGAGAATGGACCAAACGAACTGGTGGATC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTCTCTATGAGCCCCTaGCTCACCTGGTATGTTTTT +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFSMSP*LTWYVF
Trigger: AAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCAAGGCAGGCTTTGCACACTTCTCAAGCTTCTTATTaGTTCTCTTTGCTAATTTCCATTGGCCAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: SRQALHTSQASY*FSLLISIGQRK
Trigger: CTTTCTTTGGCCAATGGAAATTAGCAAAGAGAATCAATAAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCAGCAATTCTTTTTAAGATAGGTCTCTCTCCACTTTaGGTAGTATGTCAGGCTTCTATGGGACAACGTCAT +
Preference number: 3 (lower is better)
Translates to: SAILFKIGLSPL*VVCQASMGQRH
Trigger: ATGACGTTGTCCCATAGAAGCCTGACATACTACTCAAAGTGGAGAGAGACCTATCTTAAAAAGAATTGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp AAAAATGTAATATTCCTCCTGTTCTGCACTGTGTTCTaGCACAAACACCCTATGGAACTGAAAGTAGGTCTA +
Preference number: 3 (lower is better)
Translates to: KNVIFLLFCTVF*HKHPMELKVGL
Trigger: TAGACCTACTTTCAGTTCCATAGGGTGTTTGTGGCAGAACACAGTGCAGAACAGGAGGAATATTACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGGCCACTTTTCATTTaGAACTGTTTCAGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIRPLFI*NCFSPW
Trigger: CCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGAAATGGACCGTGTTaGCATCTGAGTAACTTTCTC +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHRNGPC*HLSNFL
Trigger: GAGAAAGTTACTCAGATGCAAACACGGTCCATTTCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCAGTTTTTCAGTTTCTaGATCCAGATACCTGTGAGC +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHQFFSF*IQIPVS
Trigger: GCTCACAGGTATCTGGATCAAGAAACTGAAAAACTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCTGTATCGTATCATATGCAGCTAAAAGAAGCAAACTaGTACTTCCCATATTCTGCTGCAAATCTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: SVSYHMQLKEAN*YFPYSAANLLS
Trigger: GCTAAGGAGATTTGCAGCAGAATATGGGAAGTATCAGTTTGCTTCTTTTAGCTGCATATGATACGATACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGTATCAGTTAGCTTTTaGCTGGGTTGTTATCATGCT +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHVSVSF*LGCYHA
Trigger: AGCATGATAACAACCCAGCAAAAAGCTAACTGATAC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR TCA 72 bp TCTATGATAGGTGGTAGTGTGTACATCTTTTATAGATaGAAACCATCAGGACAGAGGTTAACTAACTTTCCC +
Preference number: 3 (lower is better)
Translates to: SMIGGSVYIFYR*KPSGQRLTNFP
Trigger: GGGAAAGTTAGTTAACCTCTGTCCTGATGGTTTTCATCTATAAAAGATGTACACACTACCACCTATCATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp CATAATAACTATGAGCATTATGGAATAAGGGATGCATaGACAATTTATAGAGGTAGCTGGGGAAGGTTTAGA +
Preference number: 3 (lower is better)
Translates to: HNNYEHYGIRDA*TIYRGSWGRFR
Trigger: TCTAAACCTTCCCCAGCTACCTCTATAAATTGTGCATGCATCCCTTATTCCATAATGCTCATAGTTATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAAGCTGCAGAGATGGTaGTATGTTATGATCCCATTT +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIKLQRW*YVMIPF
Trigger: AAATGGGATCATAACATACAACCATCTCTGCAGCTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATAAAAGGGGAAATTaGGAAAGAGAGCCAGACACA +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYKRGN*EREPDT
Trigger: TGTGTCTGGCTCTCTTTCCAAATTTCCCCTTTTATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCATTAAAACACTTGTaGGAAACACTGTTCTCTATG +
Preference number: 3 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPLKHL*ETLFSM
Trigger: CATAGAGAACAGTGTTTCCAACAAGTGTTTTAATGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTGTGGCTACTTTGCATaGTACCACAATGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWICGYFA*YHNERK
Trigger: TTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCAACTATCCAACCTTaGTTATTTGAGGAAAAACAG +
Preference number: 3 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPTIQP*LFEEKQ
Trigger: CTGTTTTTCCTCAAATAACAAAGGTTGGATAGTTGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCATTAAAACACTTGTaGGAAACACTGTTCTCTATG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPLKHL*ETLFSM
Trigger: CATAGAGAACAGTGTTTCCAACAAGTGTTTTAATGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCATCCTCATATGAATaGATGTCTAATTTGGACAAG +
Preference number: 3 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPSSYE*MSNLDK
Trigger: CTTGTCCAAATTAGACATCAATTCATATGAGGATGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR GCA 72 bp GTTTTTCTGTATCTTTCCCTACTAAATAACATGGGTTaGCAACTATCCAACCTTTGTTATTTGAGGAAAAAC +
Preference number: 3 (lower is better)
Translates to: VFLYLSLLNNMG*QLSNLCYLRKN
Trigger: GTTTTTCCTCAAATAACAAAGGTTGGATAGTTGGCAACCCATGTTATTTAGTAGGGAAAGATACAGAAAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp GCAGCCAAGCATCTGGTGGTAGACCTGGGGCTACTGTaGGTCAGCAGGGCTGGAAGATGGAAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAKHLVVDLGLL*VSRAGRWKEGL
Trigger: CAGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTCTACCACCAGATGCTTGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTCCAGTGGGATCGGTaGACTCAACGGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFQWDR*TQRGLL
Trigger: CAGCAGTCCCCGTTGAGTCCACCGATCCCACTGGAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTGTTCCCGACGGACTTaGACTTCAGCCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHCSRRT*TSALGL
Trigger: AAGCCCCAGGGCTGAAGTCCAAGTCCGTCGGGAACA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCACCACTGCTCCATGTaGTGGCTCCTCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASHHCSM*WLLTPE
Trigger: CTCGGGGGTGAGGAGCCACCACATGGAGCAGTGGTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTATCAAACCCCGGCTaGGAACCGGCGAGAACCGCA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLSNPG*EPARTA
Trigger: TGCGGTTCTCGCCGGTTCTCAGCCGGGGTTTGATAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTCACTGTGAGATCTaGCCCAGGGACTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFHCEI*PRDSAE
Trigger: CTCTGCGGAGTCCCTGGGCCAGATCTCACAGTGAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTCAACGGGGACTGCTaGGGTCAGAAGGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLNGDC*GQKEDP
Trigger: AGGATCTTCCTTCTGACCCCAGCAGTCCCCGTTGAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGACTCTCCACATCCCTaGGCACTGAACGTCGAATCC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHDSPHP*ALNVES
Trigger: GGATTCGACGTTCAGTGCCCAGGGATGTGGAGAGTC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCACATCCCTGGGCACTaGACGTCGAATCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASHIPGH*TSNPPD
Trigger: GTCAGGAGGATTCGACGTTCAGTGCCCAGGGATGTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTGCAGCTTTCACTGTaGGATCTGGCCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLQLSL*DLAQGL
Trigger: GAGTCCCTGGGCCAGATCTCACAGTGAAAGCTGCAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAACTTCGAACCCCACTaGGAGCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHNFEPH*EQVAVV
Trigger: AACTACAGCCACCTGCTCTCAGTGGGGTTCGAAGTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCTGCTGGGTACCTCTaGATCTGTCCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPAGYL*ICPSLS
Trigger: AGACAGTGAAGGACAGATGCAGAGGTACCCAGCAGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTGGTATGGCTCTTCTaGGCTAGGCTGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLVWLF*ARLAQL
Trigger: CAGCTGAGCCAGCCTAGCCCAGAAGAGCCATACCAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLLGHL*YSRKED
Trigger: ATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGTTGGTCAGCAGGGCTaGAAGATGGAAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHVGQQG*KMERRA
Trigger: AGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAAC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp CCACTCAGACCCAAAGCCAATGCCACTTGTCACGTTTaGGTCCACTATGCCCCCTCCCCCAAACATATACTT +
Preference number: 4 (lower is better)
Translates to: PLRPKANATCHV*VHYAPSPKHIL
Trigger: AAGTATATGTTTGGGGGAGGGGGCATAGTGGACCAAAACGTGACAAGTGGCATTGGCTTTGGGTCTGAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp TGCAACCTTGAAGAGGGCCGTCACCAAGACCTAACCTaGCTAGATTCTGATCTCAGACTTCCAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CNLEEGRHQDLT*LDSDLRLPGSR
Trigger: TCTGGAGCCTGGAAGTCTGAGATCAGAATCTAGCAAGGTTAGGTCTTGGTGACGGCCCTCTTCAAGGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTCCAAATTTCCCATCTaGACAGCTCTGATGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSKFPI*TALMWG
Trigger: GCCCCACATCAGAGCTGTTCAGATGGGAAATTTGGA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGATGTGGGACTGCCATaGGAAGCTGGTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDVGLP*EAGGEV
Trigger: GACTTCTCCACCAGCTTCTCATGGCAGTCCCACATC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTCACTGTGAGATCTaGCCCAGGGACTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFHCEI*PRDSAE
Trigger: CTCTGCGGAGTCCCTGGGCCAGATCTCACAGTGAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTCAACGGGGACTGCTaGGGTCAGAAGGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLNGDC*GQKEDP
Trigger: AGGATCTTCCTTCTGACCCCAGCAGTCCCCGTTGAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGCGTCCTCGTTAGCTaGCATGTTCCCGACGGACTT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSVLVS*HVPDGL
Trigger: AAGTCCGTCGGGAACATGCCAGCTAACGAGGACGCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGACGCTACTTGGGATaGGAGGAATCTGTGGCTACT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHRRYLG*EESVAT
Trigger: AGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTCAACTGGGATGGCTaGTCTTTGCTCCATTACTGC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLNWDG*SLLHYC
Trigger: GCAGTAATGGAGCAAAGACCAGCCATCCCAGTTGAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTCAAAAGATGCCTCTaGCTGAAGGTCCCTCATGAG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLKRCL*LKVPHE
Trigger: CTCATGAGGGACCTTCAGCCAGAGGCATCTTTTGAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAAACTGGAACCTGCTaGGTACCTCTGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKTGTC*VPLHLS
Trigger: GGACAGATGCAGAGGTACCCAGCAGGTTCCAGTTTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTACCTGGGGCTACTGTTaGTCAGCAGGGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASTWGYC*SAGLED
Trigger: ATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp ATGAGAGCTGTAGACCTAAGGGTAGTTGGTCTCTGCTaGCAGGCTCTTCTCCATAGTCATCCACTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: MRAVDLRVVGLC*QALLHSHPLSA
Trigger: AGCACTCAGTGGATGACTATGGAGAAGAGCCTGCAAGCAGAGACCAACTACCCTTAGGTCTACAGCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAACGTCGAATCCTCCTaGCAACTATCAAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNVESS*QLSNPG
Trigger: GCCGGGGTTTGATAGTTGTCAGGAGGATTCGACGTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGAACTGATTTCTGGGTaGACCCCTTTCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASELISG*TPFHSR
Trigger: GCGACTGTGGAAAGGGGTTCACCCAGAAATCAGTTC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTAAACCAGCCCTTTTaGGACATTAGCATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLNQPF*DISMGG
Trigger: TCCACCCATGCTAATGTCTCAAAAGGGCTGGTTTAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGGAAAGGGGGCTGAATaGCAAAGAGGCATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHGKGAE*QRGIRK
Trigger: TTTCCTTATGCCTCTTTGTCATTCAGCCCCCTTTCC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGTGGGGAAAGGGGGCTaGATGACAAAGAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASVGKGG*MTKRHK
Trigger: CTTATGCCTCTTTGTCATTCAGCCCCCTTTCCCCAC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCAGGAGGCAGAGGTTaGAGTGAGTTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPGGRG*SELRSH
Trigger: GTGTGATCTCAACTCACTGCAACCTCTGCCTCCTGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCTGCTGGGTACCTCTaGATCTGTCCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPAGYL*ICPSLS
Trigger: AGACAGTGAAGGACAGATGCAGAGGTACCCAGCAGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAAGAGCTGCAAAAGTaGGCAAGCCTCATTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKELQK*ASLIVQ
Trigger: CTGCACAATGAGGCTTGCCCACTTTTGCAGCTCTTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGCCCCTTGCTCACCTaGTATGTTTTTACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSPLLT*YVFTSL
Trigger: CAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGCAGGGCTGGAAGATaGAAAGAAGGGCTGGATATA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSRAGR*KEGLDI
Trigger: TATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp AAGTTAGGGAGGGGAATCCAGAGGCCACTTTTCATTTaGAACTGTTTCAGTCCCTGGAAGTCCAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLGRGIQRPLFI*NCFSPWKSNLE
Trigger: CTCCAGGTTGGACTTCCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCCTCTGGATTCCCCTCCCTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGGAGCAAAGAAATGTaGCCTCTGGGTGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHRSKEM*PLGEDL
Trigger: AAGATCTTCACCCAGAGGTCACATTTCTTTGCTCCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTTGGGTCTTCCCTCTaGGATGCCCTTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLGSSL*DALHFP
Trigger: TGGAAAATGAAGGGCATCTCAGAGGGAAGACCCAAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTGGGTGGAGAACTCATaGATGGGATTGGTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASWVENS*MGLVPL
Trigger: TAAGGGCACCAATCCCATTCATGAGTTCTCCACCCA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAAACACTGTTCTCTATaGGCCCCTTGCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASKHCSL*APCSPG
Trigger: ACCAGGTGAGCAAGGGGCTCATAGAGAACAGTGTTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTTCAAGGCAGGCTTTaGACACTTCTCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLQGRL*TLLKLL
Trigger: AAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGGGTAGTTGGTCTCTaGTTGCAGGCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASRVVGL*LQALLH
Trigger: ATGGAGAAGAGCCTGCAAGCAGAGACCAACTACCCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGGATGGCTGGTCTTTaGTCCATTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGMAGL*SITAPC
Trigger: ACATGGAGCAGTAATGGAGCAAAGACCAGCCATCCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAAAGAGACGCTACTTaGGATGGGAGGAATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQRDAT*DGRNLW
Trigger: CCACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCAAAGTTCACTCATGTaGACCTTTCCACAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHQSSLM*TFPQGY
Trigger: ATAGCCCTGTGGAAAGGTCCACATGAGTGAACTTTG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCTCAAAAGATGCCTCTaGCTGAAGGTCCCTCATGAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLKRCL*LKVPHE
Trigger: CTCATGAGGGACCTTCAGCCAGAGGCATCTTTTGAG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAAAACTGGAACCTGCTaGGTACCTCTGCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASKTGTC*VPLHLS
Trigger: GGACAGATGCAGAGGTACCCAGCAGGTTCCAGTTTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAACCAAATCTTCTCTaGGAAAGTCTCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQPNLL*ESLQGG
Trigger: CCCTCCCTGGAGACTTTCCCAGAGAAGATTTGGTTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACATAGATTCTACCTCTTaGTGGGTGAAGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHIDSTS*WVKWQS
Trigger: ACTTTGCCACTTCACCCATCAAGAGGTAGAATCTAT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACATATTCCTCCTGTTCTaGACTGTGTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHIFLLF*TVFCHK
Trigger: TTTGTGGCAGAACACAGTGCAGAACAGGAGGAATAT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAACAGATCCATGATTaGCTGTGGATGTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKQIHD*LWMWEE
Trigger: TTCTTCCCACATCCACAGGCAATCATGGATCTGTTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCAAAGAAAGTCACGTaGCCAAGTTCAAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPKKVT*PSSKSS
Trigger: ACTTGACTTTGAACTTGGCCACGTGACTTTCTTTGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGPQQG*LTTAPC
Trigger: ACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTCTCATCCAAAATTGTaGCATCAAGCTCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHSHPKL*HQAPIQ
Trigger: CTGGATTGGAGCTTGATGCCACAATTTTGGATGAGA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCTATCAAACCCCGGCTaGGAACCGGCGAGAACCGCA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILSNPG*EPARTA
Trigger: TGCGGTTCTCGCCGGTTCTCAGCCGGGGTTTGATAG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAAACTCTTCCCAAATaGATCACGTTTATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKTLPK*ITFMGS
Trigger: AGACCCCATAAACGTGATTCATTTGGGAAGAGTTTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAATGTGACCTCTGGGTaGAGATCTTCCCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNVTSG*RSSQIQ
Trigger: CTGAATTTGGGAAGATCTTCACCCAGAGGTCACATT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGGAAACCAGTACGAATaGCAGGATTATATTTGTGTG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHGNQYE*QDYICV
Trigger: CACACAAATATAATCCTGTCATTCGTACTGGTTTCC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTATAGCAGCTCAAACTaGCTAAGACAAAGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHYSSSN*LRQRVK
Trigger: CTTTACCCTTTGTCTTAGTCAGTTTGAGCTGCTATA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGTTGCTCCTTCCCTTTaGCCTTCCAAATCTCATGTA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASVAPSL*PSKSHV
Trigger: TACATGAGATTTGGAAGGTCAAAGGGAAGGAGCAAC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGCCTGGGTGACAGAGTaGGACTCTCCACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFAWVTE*DSPHPW
Trigger: CCAGGGATGTGGAGAGTCTCACTCTGTCACCCAGGC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTTACCTCTCTGGCTaGTCCTTCTCATTATCTTCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFYLSG*SFSLSS
Trigger: AGAAGATAATGAGAAGGAGCAGCCAGAGAGGTAAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTGTTCCCGACGGACTTaGACTTCAGCCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHCSRRT*TSALGL
Trigger: AAGCCCCAGGGCTGAAGTCCAAGTCCGTCGGGAACA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCATGTTCCCCTGGCTaGGGAGCGTCCTCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPCSPG*GASSLA
Trigger: AGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCATGTTCCCCTGGCTaGGGAGCGTCCTCGTTAGCT +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPCSPG*GASSLA
Trigger: AGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGGGCCTCAGCAAGGCTaGCTCACCACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFGPQQG*LTTAPC
Trigger: ACATGGAGCAGTGGTGAGCCAGCCTTGCTGAGGCCC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAGCCACCAAGTCTATaGTGCTTTATTATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKPPSL*CFIIAA
Trigger: AGCTGCTATAATAAAGCACCATAGACTTGGTGGCTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGAAAGCCTACCTCCATaGGGTAGGCCTGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFESLPP*GRPARG
Trigger: CCCCCTTGCAGGCCTACCCCATGGAGGTAGGCTTTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACATAAAAGGGGAAATTTaGAAAGAGAGCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHIKGEI*KESQTH
Trigger: GTGTGTCTGGCTCTCTTTCCAAATTTCCCCTTTTAT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTTCTTTAGATAGCTaGATGACACTAAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFSLDS*MTLRCR
Trigger: CCGGCATCTTAGTGTCATCCAGCTATCTAAAGAAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp AAACACTTGTTGGAAACACTGTTCTCTATGAGCCCCTaGCTCACCTGGTATGTTTTTACCTCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHLLETLFSMSP*LTWYVFTSLAA
Trigger: AGCAGCCAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAACAGTGTTTCCAACAAGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTGCAGCTTTCACTGTaGGATCTGGCCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLQLSL*DLAQGL
Trigger: GAGTCCCTGGGCCAGATCTCACAGTGAAAGCTGCAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTCTGGGTAAAAACTTaGCCATGCCCAATAGTTTTA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFWVKT*PCPIVL
Trigger: TAAAACTATTGGGCATGGTCAAGTTTTTACCCAGAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGAGGGAACATGATGTaGAGAAACACAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASRGNMM*RNTGRK
Trigger: TTTTCTCCCTGTGTTTCTTCACATCATGTTCCCTCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGATGTGGGACTGCCATaGGAAGCTGGTGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHDVGLP*EAGGEV
Trigger: GACTTCTCCACCAGCTTCTCATGGCAGTCCCACATC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAAAACTTCCTTGAAATaGATGATTGGAATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHKTSLK*MIGMAH
Trigger: GTGAGCCATTCCAATCATTCATTTCAAGGAAGTTTT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGACTCAACGGGGACTaGTGGGGTCAGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGLNGD*WGQKED
Trigger: ATCTTCCTTCTGACCCCAGCAGTCCCCGTTGAGTCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAACTGGGGGAGGATATaGTTCAAAGTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNWGRI*FKVHSC
Trigger: ACATGAGTGAACTTTGAAGCATATCCTCCCCCAGTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTATTAACCTGGAATaGAACCAAATCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFINLE*NQIFSG
Trigger: CCCAGAGAAGATTTGGTTGCATTCCAGGTTAATAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTAATATATTGTTCTTaGGTCTTCCCTCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLIYCS*VFPLRC
Trigger: GCATCTCAGAGGGAAGACCCAAGAACAATATATTAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACACACAGTGTGTCTTCTaGTCACAAAGTATTCACATT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHTQCVF*SQSIHI
Trigger: AATGTGAATACTTTGTGACCAGAAGACACACTGTGT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGACAAGTGCCTCTCCTaGGCCATCTGTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHDKCLS*AICGTA
Trigger: TGCTGTACCACAGATGGCCCAGGAGAGGCACTTGTC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAGCAAGCACCCAAAATaGAAGCCACAGTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSKHPK*KPQSFC
Trigger: ACAAAAAGACTGTGGCTTCCATTTTGGGTGCTTGCT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACATGTTTTGGGGACAATaGGAGAAATTTGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHMFWGQ*EKFGNG
Trigger: TCCATTTCCAAATTTCTCCCATTGTCCCCAAAACAT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp CCCCTATTCCAGGACCTCCAAATTTCTCATCCAAAATaGTGGCATCAAGCTCCAATCCAGAATCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PLFQDLQISHPK*WHQAPIQNLKS
Trigger: AGACTTGAGATTCTGGATTGGAGCTTGATGCCACAATTTTGGATGAGAAATTTGGAGGTCCTGGAATAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAAAACTCTTCCCAAATaGATCACGTTTATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASKTLPK*ITFMGS
Trigger: AGACCCCATAAACGTGATTCATTTGGGAAGAGTTTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTATGCATCTGGAGTTGTaGCTTAGAAGGGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASMHLEL*LRRERF
Trigger: AAATCTTTCCCTTCTAAGTCACAACTCCAGATGCAT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTATGGGACAACGTCATaGAGATTTTTAGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASYGTTS*RFLEAL
Trigger: AAGGGCTTCTAAAAATCTTCATGACGTTGTCCCATA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTATAGCAGCTCAAACTaGCTAAGACAAAGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASYSSSN*LRQRVK
Trigger: CTTTACCCTTTGTCTTAGTCAGTTTGAGCTGCTATA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGACTCAACGGGGACTaGTGGGGTCAGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGLNGD*WGQKED
Trigger: ATCTTCCTTCTGACCCCAGCAGTCCCCGTTGAGTCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTTACCTCTCTGGCTaGTCCTTCTCATTATCTTCT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFYLSG*SFSLSS
Trigger: AGAAGATAATGAGAAGGAGCAGCCAGAGAGGTAAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCTGCTGATGTGGGACTaGCATGAGAAGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILLMWD*HEKLVE
Trigger: CTCCACCAGCTTCTCATGGCAGTCCCACATCAGCAG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCTGCTGATGTGGGACTaGCATGAGAAGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYLLMWD*HEKLVE
Trigger: CTCCACCAGCTTCTCATGGCAGTCCCACATCAGCAG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGAATAAGGGATGCATaGACAATTTATAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGIRDA*TIYRGS
Trigger: GCTACCTCTATAAATTGTGCATGCATCCCTTATTCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAGGACCAAAGCATATaGTTCCATAGATCCTTAACT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQDQSI*FHRSLT
Trigger: AGTTAAGGATCTATGGAAGCATATGCTTTGGTCCTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGCGTCCTCGTTAGCTaGCATGTTCCCGACGGACTT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYSVLVS*HVPDGL
Trigger: AAGTCCGTCGGGAACATGCCAGCTAACGAGGACGCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAACTCTCCACATCCCTaGGCACTGAACGTCGAATCC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHNSPHP*ALNVES
Trigger: GGATTCGACGTTCAGTGCCCAGGGATGTGGAGAGTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338637.13
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAATGAATCACGTTTATaGGGTCTTTTCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHNESRL*GLFCER
Trigger: TCTTTCACAGAAAAGACCCCATAAACGTGATTCATT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCACTTGTCACGTTTTaGTCCACTATGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPLVTF*STMPPP
Trigger: GGGAGGGGGCATAGTGGACCAAAACGTGACAAGTGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCACTTGTCACGTTTTaGTCCACTATGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPLVTF*STMPPP
Trigger: GGGAGGGGGCATAGTGGACCAAAACGTGACAAGTGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACACATGCATGAAAAGATaGGGAATTTCAGCAGATATA +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHTCMKR*GISADI
Trigger: TATATCTGCTGAAATTCCCCATCTTTTCATGCATGT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTACTCATGAATGGGATTaGTGCCCTTATAAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASTHEWD*CPYKRD
Trigger: ATCCCTTTTATAAGGGCACCAATCCCATTCATGAGT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTCCTGGGCCATCTGTaGTACAGCAGGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLLGHL*YSRKED
Trigger: ATCTTCCTTCCTGCTGTACCACAGATGGCCCAGGAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGACAAGTGCCTCTCCTaGGCCATCTGTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYDKCLS*AICGTA
Trigger: TGCTGTACCACAGATGGCCCAGGAGAGGCACTTGTC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGCTAGGAGAGAGGCATaGAACCGTTCCTTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFARREA*NRSFPS
Trigger: GCTAGGGAAGGAACGGTTCCATGCCTCTCTCCTAGC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTATAAAAGGGGAAATTTaGAAAGAGAGCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASIKGEI*KESQTH
Trigger: GTGTGTCTGGCTCTCTTTCCAAATTTCCCCTTTTAT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGTTGGTCAGCAGGGCTaGAAGATGGAAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHVGQQG*KMERRA
Trigger: AGCCCTTCTTTCCATCTTCCAGCCCTGCTGACCAAC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCACCTGGGGCTACTGTTaGTCAGCAGGGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWITWGYC*SAGLED
Trigger: ATCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACGATATTCCAGGTATGTaGGAGAATGTCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHDIPGM*ENVLIF
Trigger: AAAAATAAGGACATTCTCCCACATACCTGGAATATC...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp TGTCTAATTTGGACAAGTCCTCCATTAAAACACTTGTaGGAAACACTGTTCTCTATGAGCCCCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: CLIWTSPPLKHL*ETLFSMSPLLT
Trigger: GGTGAGCAAGGGGCTCATAGAGAACAGTGTTTCCAACAAGTGTTTTAATGGAGGACTTGTCCAAATTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAACGTCGAATCCTCCTaGCAACTATCAAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINVESS*QLSNPG
Trigger: GCCGGGGTTTGATAGTTGTCAGGAGGATTCGACGTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAACTTCGAACCCCACTaGGAGCAGGTGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFNFEPH*EQVAVV
Trigger: AACTACAGCCACCTGCTCTCAGTGGGGTTCGAAGTT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTCTGGGTAAAAACTTaGCCATGCCCAATAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFWVKT*PCPIVL
Trigger: TAAAACTATTGGGCATGGTCAAGTTTTTACCCAGAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGAGTTGTCTGATGCCTaGGTAGAGATGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHELSDA*VEMTPG
Trigger: TCCAGGTGTCATCTCTACTCAGGCATCAGACAACTC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGAACTGATTTCTGGGTaGACCCCTTTCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIELISG*TPFHSR
Trigger: GCGACTGTGGAAAGGGGTTCACCCAGAAATCAGTTC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTCAAGTGAGATAGCCTaGTGCTTTTCCTTATACAAT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASSSEIA*CFSLYN
Trigger: ATTGTATAAGGAAAAGCATCAGGCTATCTCACTTGA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTTGTGAGTTTCCTATaGATCTGGTTTGGATCTACT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASFVSFL*IWFGST
Trigger: AGTAGATCCAAACCAGATTCATAGGAAACTCACAAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGCACAAAGCTCCAATaGAACCCTACTCCCCTACAG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGTKLQ*NPTPLQ
Trigger: CTGTAGGGGAGTAGGGTTTCATTGGAGCTTTGTGCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCACAGGGCTATCTCATaGTGTAGCAGCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYHRAIS*CSSRFP
Trigger: GGGAAACCTGCTGCTACATCATGAGATAGCCCTGTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAAAGATGCCTCTGGCTaGAGGTCCCTCATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHKDASG*RSLMSQ
Trigger: TTGACTCATGAGGGACCTTCAGCCAGAGGCATCTTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTTTATTTGTATTGTCATaGTGGTTGGAAAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASLFVLS*WLERCT
Trigger: TGTGCACCTTTCCAACCATCATGACAATACAAATAA...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGTGGGGAAAGGGGGCTaGATGACAAAGAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYVGKGG*MTKRHK
Trigger: CTTATGCCTCTTTGTCATTCAGCCCCCTTTCCCCAC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGTATGGCTCAAAAGATaGCTCTGGCTGAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHVWLKR*LWLKVP
Trigger: AGGGACCTTCAGCCAGAGGCATCTTTTGAGCCATAC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAACATTTATTGTCTTaGAGTTTCTATGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQHLLS*SFYGSG
Trigger: TCCTGACCCATAGAAACTGCAAGACAATAAATGTTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCAAGATACTATGTCATaGAAACCAGTACGAATGACA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASQDTMS*KPVRMT
Trigger: TGTCATTCGTACTGGTTTCCATGACATAGTATCTTG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTATGAGTCAAGCTATCTaGCTTACAGTCAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASMSQAI*LTVKLF
Trigger: AAATAGCTTGACTGTAAGCCAGATAGCTTGACTCAT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp AGACGCTACTTGGGATGGGAGGAATCTGTGGCTACTTaGCATTGTACCACAATGAAAGAAAACAAGATACTA +
Preference number: 4 (lower is better)
Translates to: RRYLGWEESVAT*HCTTMKENKIL
Trigger: TAGTATCTTGTTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACAGATTCCTCCCATCCCAAGTAGCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCACATTTTGACTGAGTaGGTGTTTGAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHHILTE*VFEAED
Trigger: GTCCTCAGCCTCAAACACTCACTCAGTCAAAATGTG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGAGTTGTCTGATGCCTaGGTAGAGATGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFELSDA*VEMTPG
Trigger: TCCAGGTGTCATCTCTACTCAGGCATCAGACAACTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCTCACTCCCAATTCTaGCAATTGGCAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPHSQF*QLAGYL
Trigger: CAAGTAGCCTGCCAATTGTCAGAATTGGGAGTGAGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTTGGGTCTTCCCTCTaGGATGCCCTTCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLGSSL*DALHFP
Trigger: TGGAAAATGAAGGGCATCTCAGAGGGAAGACCCAAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGGGTGGAGAACTCATaGATGGGATTGGTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYWVENS*MGLVPL
Trigger: TAAGGGCACCAATCCCATTCATGAGTTCTCCACCCA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCAGCAGGAAGGAAGATaGGGCCACTATACAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFQQEGR*GHYTSS
Trigger: ACTGCTTGTATAGTGGCCTCATCTTCCTTCCTGCTG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAAAGATGCCTCTGGCTaGAGGTCCCTCATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYKDASG*RSLMSQ
Trigger: TTGACTCATGAGGGACCTTCAGCCAGAGGCATCTTT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGCGGGCTCAGGAAGTaGGGTGTATCTAATACCCAT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYCGLRK*GVSNTH
Trigger: ATGGGTATTAGATACACCTCACTTCCTGAGCCCGCA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTGCGGGCTCAGGAAGTaGGGTGTATCTAATACCCAT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFCGLRK*GVSNTH
Trigger: ATGGGTATTAGATACACCTCACTTCCTGAGCCCGCA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTGGTGGAGAAGTCCATaGGAAGCTTTTGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFWWRSP*EAFVSL
Trigger: CAGGCTCACAAAAGCTTCTCATGGACTTCTCCACCA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGGTGGAGAAGTCCATaGGAAGCTTTTGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYWWRSP*EAFVSL
Trigger: CAGGCTCACAAAAGCTTCTCATGGACTTCTCCACCA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTGCAGCAAACCCTGTTaGCCTCAGGACACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHCSKPC*PQDTVK
Trigger: TTTAACTGTGTCCTGAGGGCAACAGGGTTTGCTGCA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGGATGGCTGGTCTTTaGTCCATTACTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGMAGL*SITAPC
Trigger: ACATGGAGCAGTAATGGAGCAAAGACCAGCCATCCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGTATGGCTCAAAAGATaGCTCTGGCTGAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYVWLKR*LWLKVP
Trigger: AGGGACCTTCAGCCAGAGGCATCTTTTGAGCCATAC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAATGAATCACGTTTATaGGGTCTTTTCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASNESRL*GLFCER
Trigger: TCTTTCACAGAAAAGACCCCATAAACGTGATTCATT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAACTGTTTCAGTCCCTaGAAGTCCAACCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHNCFSP*KSNLEV
Trigger: TACCTCCAGGTTGGACTTCCAGGGACTGAAACAGTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGGAATTTTAAGTCTATaGTACAGCAAAGGTAACACT +
Preference number: 4 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASGILSL*YSKGNT
Trigger: AGTGTTACCTTTGCTGTACCATAGACTTAAAATTCC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGCAGGAAATCATCCTaGGCCCAGATCATTAAAGGC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGRKSS*AQIIKG
Trigger: GCCTTTAATGATCTGGGCCCAGGATGATTTCCTGCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGGCAGGAAATCATCCTaGGCCCAGATCATTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFGRKSS*AQIIKG
Trigger: GCCTTTAATGATCTGGGCCCAGGATGATTTCCTGCC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTCAACTGGGATGGCTaGTCTTTGCTCCATTACTGC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLNWDG*SLLHYC
Trigger: GCAGTAATGGAGCAAAGACCAGCCATCCCAGTTGAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGTAGTTGTTTGGGATaGCTGGGATGGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGSCLG*LGWMAE
Trigger: TTCTGCCATCCATCCCAGCCATCCCAAACAACTACC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGTAGTTGTTTGGGATaGCTGGGATGGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGSCLG*LGWMAE
Trigger: TTCTGCCATCCATCCCAGCCATCCCAAACAACTACC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATTCTGGTAGTTGTTTaGGATGGCTGGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHILVVV*DGWDGW
Trigger: CCATCCATCCCAGCCATCCCAAACAACTACCAGAAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAACCAAATCTTCTCTaGGAAAGTCTCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQPNLL*ESLQGG
Trigger: CCCTCCCTGGAGACTTTCCCAGAGAAGATTTGGTTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATCCATGATTGCCTGTaGATGTGGGAAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHIHDCL*MWEECG
Trigger: CCCACATTCTTCCCACATCCACAGGCAATCATGGAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAACCTTGCTAGATTCTaGTCTCAGACTTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFNLARF*SQTSRL
Trigger: GAGCCTGGAAGTCTGAGATCAGAATCTAGCAAGGTT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTCAGTTGCAGGGGTTaGAGAAATAGATTCTACCTC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLSCRG*RNRFYL
Trigger: GAGGTAGAATCTATTTCTTCAACCCCTGCAACTGAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCACACAGAGGGAACATaGTGTGAAGAAACACAGGGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYHTEGT*CEETQG
Trigger: TCCCTGTGTTTCTTCACATCATGTTCCCTCTGTGTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCTAAACCAGCCCTTTTaGGACATTAGCATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYLNQPF*DISMGG
Trigger: TCCACCCATGCTAATGTCTCAAAAGGGCTGGTTTAG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGAAAGGGGGCTGAATaGCAAAGAGGCATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGKGAE*QRGIRK
Trigger: TTTCCTTATGCCTCTTTGTCATTCAGCCCCCTTTCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGAGATTCTTCAGGTTTaGAAAGAGCAGCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHEILQV*KEQQER
Trigger: CCTCTCTTGCTGCTCTTTGCAAACCTGAAGAATCTC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGCAGCAAACCCTGTTaGCCTCAGGACACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYCSKPC*PQDTVK
Trigger: TTTAACTGTGTCCTGAGGGCAACAGGGTTTGCTGCA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAGGATTCCAAAGAGCTaGAAAAGTGGGCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFRIPKS*KSGQAS
Trigger: TGAGGCTTGCCCACTTTTGCAGCTCTTTGGAATCCT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTGCCTTGACCAAGACTaGATGCCTAGGATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFCLDQD*MPRIAS
Trigger: TGAAGCTATCCTAGGCATGCAGTCTTGGTCAAGGCA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGTGGCTGAGGTTCCTTaGGTACAGTTTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHVAEVP*VQFFSF
Trigger: GAAACTGAAAAACTGTACCCAAGGAACCTCAGCCAC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGATGGTATTAGGAGGTaGAGCCTTTGGGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFDGIRR*SLWVVV
Trigger: AACTACCACCCAAAGGCTCCACCTCCTAATACCATC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGATGGTATTAGGAGGTaGAGCCTTTGGGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYDGIRR*SLWVVV
Trigger: AACTACCACCCAAAGGCTCCACCTCCTAATACCATC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATTCTGGTAGTTGTTTaGGATGGCTGGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFILVVV*DGWDGW
Trigger: CCATCCATCCCAGCCATCCCAAACAACTACCAGAAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGCCCCTTGCTCACCTaGTATGTTTTTACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYSPLLT*YVFTSL
Trigger: CAGAGAGGTAAAAACATACCAGGTGAGCAAGGGGCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGCAGGGCTGGAAGATaGAAAGAAGGGCTGGATATA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWISRAGR*KEGLDI
Trigger: TATATCCAGCCCTTCTTTCCATCTTCCAGCCCTGCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATCCATGATTGCCTGTaGATGTGGGAAGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIIHDCL*MWEECG
Trigger: CCCACATTCTTCCCACATCCACAGGCAATCATGGAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCTGGGGCTTTCTTGCTaGCAACTTTATAATTCCAGT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLGLSC*QLYNSS
Trigger: ACTGGAATTATAAAGTTGTCAGCAAGAAAGCCCCAG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAATGTGACCTCTGGGTaGAGATCTTCCCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINVTSG*RSSQIQ
Trigger: CTGAATTTGGGAAGATCTTCACCCAGAGGTCACATT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGTGAGTATTGAGATTTaGCCTGTTGGTGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHVSIEI*PVGESL
Trigger: AAGGCTTTCACCAACAGGTCAAATCTCAATACTCAC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATGCATACTGAGAACTaGTTTCTGGGTGAACCCCTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFMHTEN*FLGEPL
Trigger: AAGGGGTTCACCCAGAAATCAGTTCTCAGTATGCAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGCCACTTTTCATTTTaGACTGTTTCAGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGHFSF*TVSVPG
Trigger: TCCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGACCGTGTTTGCATCTaGGTAACTTTCTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFDRVCI*VTFSAC
Trigger: ACAAGCTGAGAAAGTTACTCAGATGCAAACACGGTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTCAGTTGCAGGGGTTaGAGAAATAGATTCTACCTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLSCRG*RNRFYL
Trigger: GAGGTAGAATCTATTTCTTCAACCCCTGCAACTGAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCATATGTCCAGCAGTTaGAAATCTGGTTGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFHMSSS*KSGWCR
Trigger: CCTACACCAACCAGATTTTCAACTGCTGGACATATG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTTCTGCACTGTGTTCTaGCACAAACACCCTATGGAA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFFCTVF*HKHPME
Trigger: TTCCATAGGGTGTTTGTGGCAGAACACAGTGCAGAA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATATTCCTCCTGTTCTaGACTGTGTTCTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHIFLLF*TVFCHK
Trigger: TTTGTGGCAGAACACAGTGCAGAACAGGAGGAATAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTTCAAGGCAGGCTTTaGACACTTCTCAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLQGRL*TLLKLL
Trigger: AAGAAGCTTGAGAAGTGTGCAAAGCCTGCCTTGAAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCATGAATGGGATTGGTaGCCTTATAAAAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFHEWDW*PYKRDP
Trigger: GGGATCCCTTTTATAAGGGCACCAATCCCATTCATG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCATGAATGGGATTGGTaGCCTTATAAAAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYHEWDW*PYKRDP
Trigger: GGGATCCCTTTTATAAGGGCACCAATCCCATTCATG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAACTGGGGGAGGATATaGTTCAAAGTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHNWGRI*FKVHSC
Trigger: ACATGAGTGAACTTTGAAGCATATCCTCCCCCAGTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTTCACAGCAATAGTTaGTCCTTCCCTTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFHSNS*SFPLTF
Trigger: GAAGGTCAAAGGGAAGGAGCAACTATTGCTGTGAAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAAACAGATCCATGATTaGCTGTGGATGTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHKQIHD*LWMWEE
Trigger: TTCTTCCCACATCCACAGGCAATCATGGATCTGTTT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATCAGCTGGAATAACTaGTATGGCTCTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFISWNN*YGSSGL
Trigger: TAGCCCAGAAGAGCCATACCAGTTATTCCAGCTGAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCTATGAATCTGGTTTaGATCTACTCCTTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPMNLV*IYSFPQ
Trigger: TTGGGGAAAGGAGTAGATCCAAACCAGATTCATAGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGTGGCTGAGGTTCCTTaGGTACAGTTTTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFVAEVP*VQFFSF
Trigger: GAAACTGAAAAACTGTACCCAAGGAACCTCAGCCAC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGATAGTAGGAGACCATaGAGACTGTCCAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIDSRRP*RLSRLL
Trigger: TAGAAGTCTGGACAGTCTCCATGGTCTCCTACTATC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGATAGTAGGAGACCATaGAGACTGTCCAGACTTCTA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYDSRRP*RLSRLL
Trigger: TAGAAGTCTGGACAGTCTCCATGGTCTCCTACTATC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGGCTTTTCCACACATaGGTTCAGGATTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYRLFHT*VQDSKE
Trigger: CTCTTTGGAATCCTGAACCCATGTGTGGAAAAGCCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAGGCTTTTCCACACATaGGTTCAGGATTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFRLFHT*VQDSKE
Trigger: CTCTTTGGAATCCTGAACCCATGTGTGGAAAAGCCT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCAGTTAGCTTTTTGCTaGGTTGTTATCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYQLAFC*VVIMLP
Trigger: GGGCAGCATGATAACAACCCAGCAAAAAGCTAACTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCAGTTAGCTTTTTGCTaGGTTGTTATCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIQLAFC*VVIMLP
Trigger: GGGCAGCATGATAACAACCCAGCAAAAAGCTAACTG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGCAAGCTGCAGAGATaGTTGTATGTTATGATCCCA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSKLQR*LYVMIP
Trigger: TGGGATCATAACATACAACCATCTCTGCAGCTTGCT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGGCTGCCCAATTTGTaGTACTTTGTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIRLPNL*YFVIAA
Trigger: GGCTGCTATAACAAAGTACCACAAATTGGGCAGCCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAGGCTGCCCAATTTGTaGTACTTTGTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFRLPNL*YFVIAA
Trigger: GGCTGCTATAACAAAGTACCACAAATTGGGCAGCCT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGGGCTGGATATAGAGTaGAAGATAGGAAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHGLDIE*KIGKTG
Trigger: TCCAGTTTTTCCTATCTTCCACTCTATATCCAGCCC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp AGATGCCCTTCATTTTCCATAAGAAATGGACCGTGTTaGCATCTGAGTAACTTTCTCAGCTTGTATCCTATT +
Preference number: 4 (lower is better)
Translates to: RCPSFSIRNGPC*HLSNFLSLYPI
Trigger: AATAGGATACAAGCTGAGAAAGTTACTCAGATGCAAACACGGTCCATTTCTTATGGAAAATGAAGGGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCTGGGGCTTTCTTGCTaGCAACTTTATAATTCCAGT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYLGLSC*QLYNSS
Trigger: ACTGGAATTATAAAGTTGTCAGCAAGAAAGCCCCAG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATGGGGTCTTTTCTGTaGAAGAATGAGATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYMGSFL*KNEIWA
Trigger: AGCCCAAATCTCATTCTTTCACAGAAAAGACCCCAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATGGGGTCTTTTCTGTaGAAGAATGAGATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFMGSFL*KNEIWA
Trigger: AGCCCAAATCTCATTCTTTCACAGAAAAGACCCCAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGAAAATGCAAGAAGTaGGCAGTTTGCAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGKCKK*AVCNLE
Trigger: TTCAAGGTTGCAAACTGCTCACTTCTTGCATTTTCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGGAAAATGCAAGAAGTaGGCAGTTTGCAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFGKCKK*AVCNLE
Trigger: TTCAAGGTTGCAAACTGCTCACTTCTTGCATTTTCC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATAGATTCTACCTCTTaGTGGGTGAAGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYIDSTS*WVKWQS
Trigger: ACTTTGCCACTTCACCCATCAAGAGGTAGAATCTAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGAGGGAACATGATGTaGAGAAACACAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYRGNMM*RNTGRK
Trigger: TTTTCTCCCTGTGTTTCTTCACATCATGTTCCCTCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTCTGCTGTTTTAGGCTaGCCAATTTGTGGTACTTTG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFSAVLG*PICGTL
Trigger: CAAAGTACCACAAATTGGGCAGCCTAAAACAGCAGA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGGATGACACTAAGATaGCGGAAACAAGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYWMTLR*RKQALK
Trigger: TTTGAGAGCTTGTTTCCGGCATCTTAGTGTCATCCA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTTTCACAGCAATAGTTaGTCCTTCCCTTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFFHSNS*SFPLTF
Trigger: GAAGGTCAAAGGGAAGGAGCAACTATTGCTGTGAAA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATTCTCTTATGCATCTaGAGTTGTGACTTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHILLCI*SCDLEG
Trigger: CCCTTCTAAGTCACAACTCCAGATGCATAAGAGAAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCAAAGAAAGTCACGTaGCCAAGTTCAAAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPKKVT*PSSKSS
Trigger: ACTTGACTTTGAACTTGGCCACGTGACTTTCTTTGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGCAAGCACCCAAAATaGAAGCCACAGTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYSKHPK*KPQSFC
Trigger: ACAAAAAGACTGTGGCTTCCATTTTGGGTGCTTGCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAGCAAGCTGCAGAGATaGTTGTATGTTATGATCCCA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWISKLQR*LYVMIP
Trigger: TGGGATCATAACATACAACCATCTCTGCAGCTTGCT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTTTCTTTAGATAGCTaGATGACACTAAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFSLDS*MTLRCR
Trigger: CCGGCATCTTAGTGTCATCCAGCTATCTAAAGAAAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGGGCTGGATATAGAGTaGAAGATAGGAAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYGLDIE*KIGKTG
Trigger: TCCAGTTTTTCCTATCTTCCACTCTATATCCAGCCC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCCTCCATTTCACTATaGAATGTAGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPSISL*NVDFPE
Trigger: TTCTGGGAAATCTACATTTCATAGTGAAATGGAGGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCCTCCATTTCACTATaGAATGTAGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPSISL*NVDFPE
Trigger: TTCTGGGAAATCTACATTTCATAGTGAAATGGAGGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATGCATCTGGAGTTGTaGCTTAGAAGGGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIMHLEL*LRRERF
Trigger: AAATCTTTCCCTTCTAAGTCACAACTCCAGATGCAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTTCGTTGATGTACTTTaGGATGTGGTTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYFVDVL*DVVSWR
Trigger: TCTCCAAGAAACCACATCTCAAAGTACATCAACGAA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCAGCCTCAAGAACAATaGGACAATTTCTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFQPQEQ*DNFCCF
Trigger: AAAACAGCAGAAATTGTCTCATTGTTCTTGAGGCTG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCAGCCTCAAGAACAATaGGACAATTTCTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYQPQEQ*DNFCCF
Trigger: AAAACAGCAGAAATTGTCTCATTGTTCTTGAGGCTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATTCAGAAATTCCTCTaGGTTTGCTCAATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHIQKFL*VCSIAL
Trigger: CAAAGCAATTGAGCAAACTCAGAGGAATTTCTGAAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTATTTGTATTGTCATaGTGGTTGGAAAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLFVLS*WLERCT
Trigger: TGTGCACCTTTCCAACCATCATGACAATACAAATAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGGGTTGTTATCATGCTaGCCAAAACTTAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFGLLSC*PKLSDL
Trigger: TAAGTCACTAAGTTTTGGGCAGCATGATAACAACCC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGGAATAAGGGATGCATaGACAATTTATAGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFGIRDA*TIYRGS
Trigger: GCTACCTCTATAAATTGTGCATGCATCCCTTATTCC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCAGGACCAAAGCATATaGTTCCATAGATCCTTAACT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFQDQSI*FHRSLT
Trigger: AGTTAAGGATCTATGGAAGCATATGCTTTGGTCCTG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAAGAAATGTGACCTCTaGGTGAAGATCTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIKKCDL*VKIFPN
Trigger: ATTTGGGAAGATCTTCACCCAGAGGTCACATTTCTT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATAGTAGAGATGACACCTaGAAAAATGATTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHSRDDT*KNDFPH
Trigger: ATGTGGGAAATCATTTTTCCAGGTGTCATCTCTACT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATTCTCTTATGCATCTaGAGTTGTGACTTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYILLCI*SCDLEG
Trigger: CCCTTCTAAGTCACAACTCCAGATGCATAAGAGAAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTAATATATTGTTCTTaGGTCTTCCCTCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLIYCS*VFPLRC
Trigger: GCATCTCAGAGGGAAGACCCAAGAACAATATATTAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTACTCATGAATGGGATTaGTGCCCTTATAAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFTHEWD*CPYKRD
Trigger: ATCCCTTTTATAAGGGCACCAATCCCATTCATGAGT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTCAAAAGGGCAACCATaGCTGTTTCCAGGAATAATT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYSKGQP*LFPGII
Trigger: AATTATTCCTGGAAACAGCCATGGTTGCCCTTTTGA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTTTTCTGTGAAAGAATaGGATTTGGGCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIFSVKE*DLGLDE
Trigger: TTCATCCAAGCCCAAATCTCATTCTTTCACAGAAAA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTTTTCTGTGAAAGAATaGGATTTGGGCTTGGATGAA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYFSVKE*DLGLDE
Trigger: TTCATCCAAGCCCAAATCTCATTCTTTCACAGAAAA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTCAAGTGAGATAGCCTaGTGCTTTTCCTTATACAAT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYSSEIA*CFSLYN
Trigger: ATTGTATAAGGAAAAGCATCAGGCTATCTCACTTGA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCAACCTTTGTTATTTaGGGAAAAACAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPTFVI*GKTVFL
Trigger: GAGGAAAACTGTTTTTCCTCAAATAACAAAGGTTGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCAACCTTTGTTATTTaGGGAAAAACAGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPTFVI*GKTVFL
Trigger: GAGGAAAACTGTTTTTCCTCAAATAACAAAGGTTGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTAAAAGAAGCAAACTaGTACTTCCCATATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLKEAN*YFPYSA
Trigger: AGCAGAATATGGGAAGTATCAGTTTGCTTCTTTTAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCTAAAAGAAGCAAACTaGTACTTCCCATATTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYLKEAN*YFPYSA
Trigger: AGCAGAATATGGGAAGTATCAGTTTGCTTCTTTTAG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTACATCTTTTATAGATaGAAACCATCAGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFYIFYR*KPSGQR
Trigger: CCTCTGTCCTGATGGTTTTCATCTATAAAAGATGTA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATTCAGAAATTCCTCTaGGTTTGCTCAATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFIQKFL*VCSIAL
Trigger: CAAAGCAATTGAGCAAACTCAGAGGAATTTCTGAAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR TCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAAAACTTCCTTGAAATaGATGATTGGAATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFKTSLK*MIGMAH
Trigger: GTGAGCCATTCCAATCATTCATTTCAAGGAAGTTTT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCAACATTTATTGTCTTaGAGTTTCTATGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFQHLLS*SFYGSG
Trigger: TCCTGACCCATAGAAACTGCAAGACAATAAATGTTG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATCAGTTAGCTTTTTaGTGGGTTGTTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYQLAF*WVVIML
Trigger: CAGCATGATAACAACCCAGCAAAAAGCTAACTGATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTATCAGTTAGCTTTTTaGTGGGTTGTTATCATGCTG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYYQLAF*WVVIML
Trigger: CAGCATGATAACAACCCAGCAAAAAGCTAACTGATA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATCCGAGGAAAGAAATATaGTTCTTAGTCAAATCTATG +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHPRKEI*FLVKSM
Trigger: CATAGATTTGACTAAGAAGCATATTTCTTTCCTCGG...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTTTATTAACCTGGAATaGAACCAAATCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYFINLE*NQIFSG
Trigger: CCCAGAGAAGATTTGGTTGCATTCCAGGTTAATAAA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATGTACTTTGAGATGTaGTTTCTTGGAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHMYFEM*FLGEGF
Trigger: AAATCCTTCTCCAAGAAACCACATCTCAAAGTACAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATACCCAATATATACAATaGTGGGATAGGTACAGGATA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYTQYIQ*WDRYRI
Trigger: TATCCTGTACCTATCCCACCATTGTATATATTGGGT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATACACAGTGTGTCTTCTaGTCACAAAGTATTCACATT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYTQCVF*SQSIHI
Trigger: AATGTGAATACTTTGTGACCAGAAGACACACTGTGT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAAAATAAAAATTCTCTaGGCAAACCAGTGCCTACCT +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYKIKIL*ANQCLP
Trigger: AGGTAGGCACTGGTTTGCCCAGAGAATTTTTATTTT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATGAGTCAAGCTATCTaGCTTACAGTCAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFMSQAI*LTVKLF
Trigger: AAATAGCTTGACTGTAAGCCAGATAGCTTGACTCAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATGTTTTGGGGACAATaGGAGAAATTTGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYMFWGQ*EKFGNG
Trigger: TCCATTTCCAAATTTCTCCCATTGTCCCCAAAACAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
3UTR CAA 72 bp ACCAATTTTCCATCCTCATATGAATTGATGTCTAATTaGGACAAGTCCTCCATTAAAACACTTGTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TNFPSSYELMSN*DKSSIKTLVGN
Trigger: GTTTCCAACAAGTGTTTTAATGGAGGACTTGTCCAAATTAGACATCAATTCATATGAGGATGGAAAATTGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCTTCTGAATTCTGCTTaGCAAAGAAACAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWILLNSA*QRNSYF
Trigger: GAAATAACTGTTTCTTTGGCAAGCAGAATTCAGAAG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCTTCTGAATTCTGCTTaGCAAAGAAACAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFLLNSA*QRNSYF
Trigger: GAAATAACTGTTTCTTTGGCAAGCAGAATTCAGAAG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR GCA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCCGAGGAAAGAAATATaGTTCTTAGTCAAATCTATG +
Preference number: 4 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYPRKEI*FLVKSM
Trigger: CATAGATTTGACTAAGAAGCATATTTCTTTCCTCGG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATGTACTTTGAGATGTaGTTTCTTGGAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFMYFEM*FLGEGF
Trigger: AAATCCTTCTCCAAGAAACCACATCTCAAAGTACAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTACATGCATGAAAAGATaGGGAATTTCAGCAGATATA +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFTCMKR*GISADI
Trigger: TATATCTGCTGAAATTCCCCATCTTTTCATGCATGT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGGAATTTTAAGTCTATaGTACAGCAAAGGTAACACT +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIGILSL*YSKGNT
Trigger: AGTGTTACCTTTGCTGTACCATAGACTTAAAATTCC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGATATTCCAGGTATGTaGGAGAATGTCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFDIPGM*ENVLIF
Trigger: AAAAATAAGGACATTCTCCCACATACCTGGAATATC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CCA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCACAATGGGAGAAATTTaGAAATGGACTGGATATATC +
Preference number: 4 (lower is better)
Translates to: KTSYICIIDVPEEEKKWITMGEI*KWTGYI
Trigger: GATATATCCAGTCCATTTCCAAATTTCTCCCATTGT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS GCA 90 bp AGGTATGTGGGAAGGGGCGCAGAGCTTCTACGTCTTCTCCGGGCGTaGCATCCACCCAGCACCTCCATGTTCACCAATCCTGAAGCTCTC +
Preference number: 5 (lower is better)
Translates to: RYVGRGAELLRLLRA*HPPSTSMFTNPEAL
Trigger: GAGAGCTTCAGGATTGGTGAACATGGAGGTGCTGGGTGGATGGCACGCCCGGAGAAGACGTAGAAGCTCTGCGCCCCTTCCCACATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483520.1
CDS CCA 90 bp TTGCAGACTTCAACAGGTGTTCTCACAGGCACTGCCATGTTCCCCTaGCTGGGGAGCGTCCTCGTTAGCTGGCATGTTCCCGACGGACTT +
Preference number: 5 (lower is better)
Translates to: LQTSTGVLTGTAMFP*LGSVLVSWHVPDGL
Trigger: AAGTCCGTCGGGAACATGCCAGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGGCAGTGCCTGTGAGAACACCTGTTGAAGTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483520.1
CDS TCA 90 bp GCATGTTCCCGACGGACTTGGACTTCAGCCCTGGGGCTTTCTTGCTaGCAACTTTATAATTCCAGTGGGATCGGTGGACTCAACGGGGAC +
Preference number: 5 (lower is better)
Translates to: ACSRRTWTSALGLSC*QLYNSSGIGGLNGD
Trigger: GTCCCCGTTGAGTCCACCGATCCCACTGGAATTATAAAGTTGTCAGCAAGAAAGCCCCAGGGCTGAAGTCCAAGTCCGTCGGGAACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334937.8
ENST00000338637.13
ENST00000376950.4
ENST00000376954.6
ENST00000483520.1
CDS CCA 90 bp GTCCTCGTTAGCTGGCATGTTCCCGACGGACTTGGACTTCAGCCCTaGGGCTTTCTTGCTGACAACTTTATAATTCCAGTGGGATCGGTG +
Preference number: 5 (lower is better)
Translates to: VLVSWHVPDGLGLQP*GFLADNFIIPVGSV
Trigger: CACCGATCCCACTGGAATTATAAAGTTGTCAGCAAGAAAGCCCCAGGGCTGAAGTCCAAGTCCGTCGGGAACATGCCAGCTAACGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334937.8
ENST00000338637.13
ENST00000376950.4
ENST00000376954.6
ENST00000483520.1
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGACCTGGGGCTACTGTaGGTCAGCAGGGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDLGLL*VSRAGR
Trigger: TCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCTGGGGCTAGAGGTCTaGGAAAACCTCACTCCCAAT +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLGLEV*ENLTPN
Trigger: ATTGGGAGTGAGGTTTTCCAAGACCTCTAGCCCCAG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTGGTAGAGCCAGGATaGAAACCCTGGCAGATGGGT +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHLVEPG*KPWQMG
Trigger: ACCCATCTGCCAGGGTTTCAATCCTGGCTCTACCAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACACAAAGAGACGCTACTaGGGATGGGAGGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHTKRRY*GWEESV
Trigger: CACAGATTCCTCCCATCCCAAGTAGCGTCTCTTTGT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGAGGTTGCAGTGAGTaGAGATCACACAAACTGCAC +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHRGCSE*RSHKLH
Trigger: GTGCAGTTTGTGTGATCTCAACTCACTGCAACCTCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACAGGCCACTTTTCATTTaGAACTGTTTCAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHRPLFI*NCFSPW
Trigger: CCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCCT...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGTAGTTGGTCTCTGCTaGCAGGCTCTTCTCCATAGT +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASVVGLC*QALLHS
Trigger: ACTATGGAGAAGAGCCTGCAAGCAGAGACCAACTAC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCCAAAGCACAAGCTTaGGTCTTAGGCCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPKAQA*VLGLLF
Trigger: GAAAAGCAGGCCTAAGACCAAAGCTTGTGCTTTGGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGATCCACCAGTTCGTTaGGTCCATTCTCTATCTTCC +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDPPVR*VHSLSS
Trigger: GGAAGATAGAGAATGGACCAAACGAACTGGTGGATC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS CCA 90 bp CACTGGCAACAAAGAAACACAAACTCAGCCCAACTCCTGATTAGATaGATTCAATCTCCCCATGCTAATGGCCTATCAAAAGGGCAACCA +
Preference number: 5 (lower is better)
Translates to: HWQQRNTNSAQLLIR*IQSPHANGLSKGQP
Trigger: TGGTTGCCCTTTTGATAGGCCATTAGCATGGGGAGATTGAATCCATCTAATCAGGAGTTGGGCTGAGTTTGTGTTTCTTTGTTGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTATGTTCCCGACGGACTaGGACTTCAGCCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFMFPTD*DFSPGA
Trigger: AGCCCCAGGGCTGAAGTCCAAGTCCGTCGGGAACAT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGCCACTTGTCACGTTTaGGTCCACTATGCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHATCHV*VHYAPS
Trigger: GGAGGGGGCATAGTGGACCAAAACGTGACAAGTGGC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACTTTAGGCTGCCCAATTaGTGGTACTTTGTTATAGCA +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHFRLPN*WYFVIA
Trigger: TGCTATAACAAAGTACCACAAATTGGGCAGCCTAAA...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGACCTGGGGCTACTGTaGGTCAGCAGGGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFDLGLL*VSRAGR
Trigger: TCTTCCAGCCCTGCTGACCAACAGTAGCCCCAGGTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATATGTTGTCGGTTCCCTaGGCTCCAGGGGCAGATACG +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYMLSVP*APGADT
Trigger: CGTATCTGCCCCTGGAGCCAAGGGAACCGACAACAT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GATGTAGCAGCAGGTTTCCCCTATGATGAGCCATCTGAGAGAGTAAGCAAGCACCCATCCTCATATGAATaGATGTCTAATTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: DVAAGFPYDEPSERVSKHPSSYE*MSNLDK
Trigger: CTTGTCCAAATTAGACATCAATTCATATGAGGATGG...GTGCTTGCTTACTCTCTCAGATGGCTCATCATAGGGGAAACCTGCTGCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGTTCTGGGTAAAAACTaGACCATGCCCAATAGTTTT +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASVLGKN*TMPNSF
Trigger: AAAACTATTGGGCATGGTCAAGTTTTTACCCAGAAC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGAGCAGTTTGCAACCTaGAAGAGGGCCGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFEQFAT*KRAVTK
Trigger: CTTGGTGACGGCCCTCTTCAAGGTTGCAAACTGCTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATGAGCAGTTTGCAACCTaGAAGAGGGCCGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYEQFAT*KRAVTK
Trigger: CTTGGTGACGGCCCTCTTCAAGGTTGCAAACTGCTC...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTGGGATGGCTGGTCTTaGCTCCATTACTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHWDGWS*LHYCSM
Trigger: CATGGAGCAGTAATGGAGCAAAGACCAGCCATCCCA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTAAGCTGCAGAGATGGTaGTATGTTATGATCCCATTT +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASKLQRW*YVMIPF
Trigger: AAATGGGATCATAACATACAACCATCTCTGCAGCTT...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTGGTAGAGCCAGGATaGAAACCCTGGCAGATGGGT +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHLVEPG*KPWQMG
Trigger: ACCCATCTGCCAGGGTTTCAATCCTGGCTCTACCAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCAACTATCCAACCTTaGTTATTTGAGGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPTIQP*LFEEKQ
Trigger: CTGTTTTTCCTCAAATAACAAAGGTTGGATAGTTGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGCTCATTTTAATATATaGTTCTTGGGTCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASAHFNI*FLGLPS
Trigger: AGAGGGAAGACCCAAGAACAATATATTAAAATGAGC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTCCATTAAAACACTTGTaGGAAACACTGTTCTCTATG +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASPLKHL*ETLFSM
Trigger: CATAGAGAACAGTGTTTCCAACAAGTGTTTTAATGG...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GGATATAGAGTGGAAGATAGGAAAAACTGGAACCTGCTGGGTACCTCTGCATCTGACAATGGGAGAAATTaGGAAATGGACTGGATATAT +
Preference number: 5 (lower is better)
Translates to: GYRVEDRKNWNLLGTSASDNGRN*EMDWIY
Trigger: ATATATCCAGTCCATTTCCAAATTTCTCCCATTGTC...AGATGCAGAGGTACCCAGCAGGTTCCAGTTTTTCCTATCTTCCACTCTATATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCCAAAGCACAAGCTTaGGTCTTAGGCCTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPKAQA*VLGLLF
Trigger: GAAAAGCAGGCCTAAGACCAAAGCTTGTGCTTTGGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTATTCTGGTAGTTGTTaGGGATGGCTGGGATGGATG +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIYSGSC*GWLGWM
Trigger: CATCCATCCCAGCCATCCCAAACAACTACCAGAATA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGGCCACTTTTCATTTaGAACTGTTTCAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYRPLFI*NCFSPW
Trigger: CCAGGGACTGAAACAGTTCAAAATGAAAAGTGGCCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTTCTCTATGAGCCCCTaGCTCACCTGGTATGTTTTT +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFFSMSP*LTWYVF
Trigger: AAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCTTCTCTATGAGCCCCTaGCTCACCTGGTATGTTTTT +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIFSMSP*LTWYVF
Trigger: AAAAACATACCAGGTGAGCAAGGGGCTCATAGAGAA...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAGTTGCTCCTTCCCTTaGACCTTCCAAATCTCATGT +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFSCSFP*TFQISC
Trigger: ACATGAGATTTGGAAGGTCAAAGGGAAGGAGCAACT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAGAAATGGACCGTGTTaGCATCTGAGTAACTTTCTC +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYRNGPC*HLSNFL
Trigger: GAGAAAGTTACTCAGATGCAAACACGGTCCATTTCT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATCAGTTTTTCAGTTTCTaGATCCAGATACCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYQFFSF*IQIPVS
Trigger: GCTCACAGGTATCTGGATCAAGAAACTGAAAAACTG...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCAGTTTTTCAGTTTCTaGATCCAGATACCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFQFFSF*IQIPVS
Trigger: GCTCACAGGTATCTGGATCAAGAAACTGAAAAACTG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTAATAGATTCTACCTCTaGATGGGTGAAGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFNRFYL*MGEVAK
Trigger: CTTTGCCACTTCACCCATCAAGAGGTAGAATCTATT...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCAATAGATTCTACCTCTaGATGGGTGAAGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWINRFYL*MGEVAK
Trigger: CTTTGCCACTTCACCCATCAAGAGGTAGAATCTATT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATTTTAGGCTGCCCAATTaGTGGTACTTTGTTATAGCA +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHFRLPN*WYFVIA
Trigger: TGCTATAACAAAGTACCACAAATTGGGCAGCCTAAA...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATATAATGAATCATCTCTaGTGTCTTCACCCTCCATTT +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHIMNHL*CLHPPF
Trigger: AAATGGAGGGTGAAGACACAAGAGATGATTCATTAT...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp GTTCATTATTTGTATTGTCATGATGGTTGGAAAGGTGCACACGTCAAAACTCATGCTCATTTTAATATATaGTTCTTGGGTCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VHYLYCHDGWKGAHVKTHAHFNI*FLGLPS
Trigger: AGAGGGAAGACCCAAGAACAATATATTAAAATGAGC...ATGAGTTTTGACGTGTGCACCTTTCCAACCATCATGACAATACAAATAATGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGTATCAGTTAGCTTTTaGCTGGGTTGTTATCATGCT +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFVSVSF*LGCYHA
Trigger: AGCATGATAACAACCCAGCAAAAAGCTAACTGATAC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCGTATCAGTTAGCTTTTaGCTGGGTTGTTATCATGCT +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIVSVSF*LGCYHA
Trigger: AGCATGATAACAACCCAGCAAAAAGCTAACTGATAC...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATAAGCTGCAGAGATGGTaGTATGTTATGATCCCATTT +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYKLQRW*YVMIPF
Trigger: AAATGGGATCATAACATACAACCATCTCTGCAGCTT...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTATAAAAGGGGAAATTaGGAAAGAGAGCCAGACACA +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFYKRGN*EREPDT
Trigger: TGTGTCTGGCTCTCTTTCCAAATTTCCCCTTTTATA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCATAATGAATCATCTCTaGTGTCTTCACCCTCCATTT +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIIMNHL*CLHPPF
Trigger: AAATGGAGGGTGAAGACACAAGAGATGATTCATTAT...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp ATCCTTGGCTTTTCCATATTTCTTCTGAATTCTGCTTGCCAAAGAAACAGTTATTGTGGCTACTTTGCATaGTACCACAATGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: ILGFSIFLLNSACQRNSYCGYFA*YHNERK
Trigger: TTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACA...ATAACTGTTTCTTTGGCAAGCAGAATTCAGAAGAAATATGGAAAAGCCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTTGTGGCTACTTTGCATaGTACCACAATGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFCGYFA*YHNERK
Trigger: TTTTCTTTCATTGTGGTACAATGCAAAGTAGCCACA...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp AAGACATCTTACATATGCATAATTGATGTCCCTGAAGAAGAGAAGAAATGGATCCCAACTATCCAACCTTaGTTATTTGAGGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: KTSYICIIDVPEEEKKWIPTIQP*LFEEKQ
Trigger: CTGTTTTTCCTCAAATAACAAAGGTTGGATAGTTGG...GATCCATTTCTTCTCTTCTTCAGGGACATCAATTATGCATATGTAAGATGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTCCATCCTCATATGAATaGATGTCTAATTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFPSSYE*MSNLDK
Trigger: CTTGTCCAAATTAGACATCAATTCATATGAGGATGG...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS-3UTR CAA 90 bp CTGAAAGTAGGTCTACTCACCAGTTATATTATTTTGCTGCACTACCTTTCATTTGACAATGGGAGAAATTaGGAAATGGACTGGATATAT +
Preference number: 5 (lower is better)
Translates to: LKVGLLTSYIILLHYLSFDNGRN*EMDWIY
Trigger: ATATATCCAGTCCATTTCCAAATTTCTCCCATTGTC...AAATGAAAGGTAGTGCAGCAAAATAATATAACTGGTGAGTAGACCTACTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338637.13
ENST00000376954.6
CDS CCA 72 bp GCCATGTTCCCCTGGCTGGGGAGCGTCCTCGTTAGCTaGCATGTTCCCGACGGACTTGGACTTCAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: AMFPWLGSVLVS*HVPDGLGLQPW
Trigger: CCAGGGCTGAAGTCCAAGTCCGTCGGGAACATGCCAGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334937.8
ENST00000338637.13
ENST00000376950.4
ENST00000376954.6
ENST00000483520.1
CDS CCA 72 bp TCAACAGGTGTTCTCACAGGCACTGCCATGTTCCCCTaGCTGGGGAGCGTCCTCGTTAGCTGGCATGTTCCC +
Preference number: 6 (lower is better)
Translates to: STGVLTGTAMFP*LGSVLVSWHVP
Trigger: GGGAACATGCCAGCTAACGAGGACGCTCCCCAGCCAGGGGAACATGGCAGTGCCTGTGAGAACACCTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483520.1
CDS CCA 72 bp CTAGCACCCCTATCCACATACATAGGGCAAGGTATGTaGGAAGGGGCGCAGAGCTTCTACGTCTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: LAPLSTYIGQGM*EGAQSFYVFSG
Trigger: CCCGGAGAAGACGTAGAAGCTCTGCGCCCCTTCCCACATACCTTGCCCTATGTATGTGGATAGGGGTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483520.1
CDS TCA 72 bp GCAGAGACTCCAAGAACTCTCCACATCCCTGGGCACTaGACGTCGAATCCTCCTGACAACTATCAAACCCCG +
Preference number: 6 (lower is better)
Translates to: AETPRTLHIPGH*TSNPPDNYQTP
Trigger: CGGGGTTTGATAGTTGTCAGGAGGATTCGACGTTCAGTGCCCAGGGATGTGGAGAGTTCTTGGAGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338637.13
CDS TCA 72 bp CGACGGACTTGGACTTCAGCCCTGGGGCTTTCTTGCTaGCAACTTTATAATTCCAGTGGGATCGGTGGACTC +
Preference number: 6 (lower is better)
Translates to: RRTWTSALGLSC*QLYNSSGIGGL
Trigger: GAGTCCACCGATCCCACTGGAATTATAAAGTTGTCAGCAAGAAAGCCCCAGGGCTGAAGTCCAAGTCCGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334937.8
ENST00000338637.13
ENST00000376950.4
ENST00000376954.6
ENST00000483520.1
CDS CAA 90 bp GCACCTCCATGTTCACCAATCCTGAAGCTCTCCAAACCACATCTTTaGCAGACTTCAACAGGTGTTCTCACAGGCACTGCCATGTTCCCC +
Preference number: 6 (lower is better)
Translates to: APPCSPILKLSKPHL*QTSTGVLTGTAMFP
Trigger: GGGGAACATGGCAGTGCCTGTGAGAACACCTGTTGAAGTCTGCAAAAGATGTGGTTTGGAGAGCTTCAGGATTGGTGAACATGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483520.1
CDS CAA 72 bp TGTTCACCAATCCTGAAGCTCTCCAAACCACATCTTTaGCAGACTTCAACAGGTGTTCTCACAGGCACTGCC +
Preference number: 6 (lower is better)
Translates to: CSPILKLSKPHL*QTSTGVLTGTA
Trigger: GGCAGTGCCTGTGAGAACACCTGTTGAAGTCTGCAAAAGATGTGGTTTGGAGAGCTTCAGGATTGGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483520.1