RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF804A (Homo sapiens)

Ensembl gene IDs: ENSG00000170396

Ensembl transcript IDs: ENST00000302277.7

Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCAGAAACTTAGGGATTTATTTGCATCATTGCACTTACAGTAAATaGTTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCAC +
Preference number: 1 (lower is better)
Translates to: IRNLGIYLHHCTYSK*FQTNDAMYRPVYFH
Trigger: GTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCAAATAAATCCCTAAGTTTCTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTGCACCCCTCTGTGGTaGGCGCCGAGGCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSCTPLW*APRLPR
Trigger: GCGGGGGAGCCTCGGCGCTCACCACAGAGGGGTGCA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTCCCCCGCCTCCGCATaGTCGCCGCGCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQSPASA*SPRSPL
Trigger: GAGGGGAGAGCGCGGCGAGCATGCGGAGGCGGGGGA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTCCGGCGACGGTGGGCTaGGAACCCGCCACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFPATVG*EPATRA
Trigger: TGCCCTCGTGGCGGGTTCCCAGCCCACCGTCGCCGG...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCCCCGGCACGTCCTCTaGAGACTGGCTCACTGCACC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQPRHVL*RLAHCT
Trigger: GGTGCAGTGAGCCAGTCTCCAGAGGACGTGCCGGGG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTCCTGCAGCTGCGGCTaGAGCTGCAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSCSCG*SCSCSS
Trigger: GCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTGTAGTAACACTCCATaGGGCAGCCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGCSNTP*GSRRLL
Trigger: GAGGAGGCGGCGGCTGCCCCATGGAGTGTTACTACA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTGTTCCCGTTCTTGCTaGGAGGGCCCCGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQCSRSC*EGPGKL
Trigger: GAGTTTTCCGGGGCCCTCTCAGCAAGAACGGGAACA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGACGTCCTCTGGAGACTaGCTCACTGCACCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQTSSGD*LTAPLC
Trigger: ACAGAGGGGTGCAGTGAGCCAGTCTCCAGAGGACGT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCACTTTAAAGGTTCCTaGAGCTGCGGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQHFKGS*SCGCSC
Trigger: GCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGCCAGATGGCTAGGATaGAGAACGGAAGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSARWLG*RTEAGM
Trigger: CATTCCAGCTTCCGTTCTTCATCCTAGCCATCTGGC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTAGCTCAGCCAGCTTGTaGAGGCGTTGGAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSSASL*RRWSAF
Trigger: AAAGGCACTCCAACGCCTGCACAAGCTGGCTGAGCT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATCCGGGGTGGAATCTaGCTCTTTTTCGCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQIRGGI*LFFASV
Trigger: AACGGAGGCGAAAAAGAGGCAGATTCCACCCCGGAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCAACCTCTTCAGTATTTaGAGGGGCCAATGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGNLFSI*RGQCLG
Trigger: CCCGAGACATTGGCCCCTTCAAATACTGAAGAGGTT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTGTCCGTTGCTGAGATaGGTGGAGCTGATGACAATG +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQCPLLR*VELMTM
Trigger: CATTGTCATCAGCTCCACGCATCTCAGCAACGGACA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGGCAACAAAAGTTGGCTaGTTCCCAGGACAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQATKVG*FPGQSL
Trigger: GAGGCTTTGTCCTGGGAACCAGCCAACTTTTGTTGC...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGGAAGCTGGAATGATTaGCATCTGAGGAGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSGSWND*HLRRSN
Trigger: GTTGCTCCTCCTCAGATGCCAATCATTCCAGCTTCC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGTGCAGGCGTTGGAGTaGCTTTTCCTGTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSVQALE*LFLFSF
Trigger: GAAAGAAAACAGGAAAAGGCACTCCAACGCCTGCAC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGTAGAACATAAGGACTaGTGCAAAGGCAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGVEHKD*CKGKGC
Trigger: GCAGCCTTTGCCTTTGCAGCAGTCCTTATGTTCTAC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGTTTCAAATCCGGGGTaGAATCTGCCTCTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGVSNPG*NLPLFR
Trigger: GCGAAAAAGAGGCAGATTCCACCCCGGATTTGAAAC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATTCATCTTTCCTTGTaGAAGGGCCTCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQIHLSL*KGLSQF
Trigger: GAACTGGCTGAGGCCCTTCCACAAGGAAAGATGAAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCACGCAGCCACTCAGTTaGTGTCTCATTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGTQPLS*CLIHLS
Trigger: GGAAAGATGAATGAGACACCAACTGAGTGGCTGCGT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGGTTCTGGTGAGAGCTaGGATTTGGGAAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSGSGES*DLGKKL
Trigger: CAGTTTCTTTCCCAAATCCCAGCTCTCACCAGAACC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGAAGGAAAGAGTGCATaGGGTAAAGATGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSEGKSA*GKDGKA
Trigger: GGCTTTCCCATCTTTACCCCATGCACTCTTTCCTTC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTTTGTTTCAGTTCCTTaGGCCTCTGCTTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSFVSVP*ASACEH
Trigger: ATGCTCACAAGCAGAGGCTCAAGGAACTGAAACAAA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTGCTGCAAAACAGTGTaGTGGATAGTGGTTACAGAG +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGCCKTV*WIVVTE
Trigger: CTCTGTAACCACTATCCATCACACTGTTTTGCAGCA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAACTGTTGGTGTGGCTaGAGCACTTTAAAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSNCWCG*STLKVP
Trigger: AGGAACCTTTAAAGTGCTTCAGCCACACCAACAGTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGGAATGATTGGCATCTaGGGAGGAGCAACAAAAGTT +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGGMIGI*GGATKV
Trigger: AACTTTTGTTGCTCCTCCTCAGATGCCAATCATTCC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATGATTTCAAACCAATaGCGCCATGTATCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQMISNQ*RHVSAS
Trigger: ACTGGCCGATACATGGCGTCATTGGTTTGAAATCAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTCACAGACAGATGTGGTaGGATCATTGGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSHRQMW*DHWKHL
Trigger: CAGATGTTTCCAATGATCCCACCACATCTGTCTGTG...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTTGAGCCTCTGCTTGTaGGCATGGTCATATGAATTA +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSLSLCL*AWSYEL
Trigger: TAATTCATATGACCATGCTCACAAGCAGAGGCTCAA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAAATCCTTTTCCCACTaGGGCATCATCACTGTATTC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSKSFSH*GIITVF
Trigger: GAATACAGTGATGATGCCTCAGTGGGAAAAGGATTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTATTGCCTCTGGTGGATaGAAAGAGTTAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSIASGG*KELVFS
Trigger: GGAGAAAACTAACTCTTTTCATCCACCAGAGGCAAT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCTCTCTAGTGGTATTTaGTCTGCTAATGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQLSSGI*SANGTE
Trigger: TTCAGTCCCATTAGCAGATCAAATACCACTAGAGAG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATTTCTGATGGCCACTaGAGAACTGTAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQISDGH*RTVDLC
Trigger: ACACAGATCTACAGTTCTTCAGTGGCCATCAGAAAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCCAAAAGAGGAGTaGCTTGGCTGCATTTATTTT +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGQPKEE*LGCIYF
Trigger: AAAATAAATGCAGCCAAGTCACTCCTCTTTTGGCTG...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTCTGAAAGTGGTCCCATaGAAATGTCTTCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFLKVVP*KCLPAS
Trigger: AGAAGCAGGAAGACATTTGCATGGGACCACTTTCAG...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCAGGGTATTGTCAATTaGTTCTTTTGTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQQGIVN*FFCWGT
Trigger: AGTGCCCCAACAAAAGAAGCAATTGACAATACCCTG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCTACACAGACAGATGTaGTGGGATCATTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQLHRQM*WDHWKH
Trigger: ATGTTTCCAATGATCCCACCACATCTGTCTGTGTAG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATGAAGAACGGAAGCTaGAATGATTGGCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFMKNGS*NDWHLR
Trigger: CCTCAGATGCCAATCATTCCAGCTTCCGTTCTTCAT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGAAGCACATCTGTTGGTaGAGATTGTTGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQKHICW*RLLKMT
Trigger: TGTCATCTTCAACAATCTTCACCAACAGATGTGCTT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTCTTCCTGCTTCTGCTaGGAACAAAGATCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQSSCFC*EQRSFK
Trigger: CTTAAAAGATCTTTGTTCTCAGCAGAAGCAGGAAGA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCATCCTGACTACAGCTTaGCATTTTGGTTTTCCAACA +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGILTTA*HFGFPT
Trigger: TGTTGGAAAACCAAAATGTCAAGCTGTAGTCAGGAT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTATCATTGGAAACATCTaGCAATTCACCAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSIIGNI*QFTRSG
Trigger: ACCACTTCTGGTGAATTGTCAGATGTTTCCAATGAT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCATAGGATTTAGGCTGTaGCTGTCTAAAGTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGIGFRL*LSKVPF
Trigger: GAAAGGAACTTTAGACAGTCACAGCCTAAATCCTAT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAACCTCAGTTGTGGATaGCTCGTTATGCTTAACATT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSNLSCG*LVMLNI
Trigger: AATGTTAAGCATAACGAGGCATCCACAACTGAGGTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTCTCTGCTTCCATTTTaGAGCGAGTTTCTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSSLLPF*SEFLIL
Trigger: AAGAATCAGAAACTCGCTGCAAAATGGAAGCAGAGA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGAATGGAGCCAGGATTTaGTCAGCTGTTACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQNGARI*SAVTKV
Trigger: TACTTTTGTAACAGCTGAGCAAATCCTGGCTCCATT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTCTGCACATTGCCTCTaGTGGATGAAAAGAGTTAGT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSAHCL*WMKRVS
Trigger: ACTAACTCTTTTCATCCACCAGAGGCAATGTGCAGA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGAATCACAACTACTaGAGAGAATATCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGQNHNY*REYHQP
Trigger: TGGCTGATGATATTCTCTCCAGTAGTTGTGATTCTG...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTGCTCAGTTTCACCATTaGTTTCAGAAGGAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFAQFHH*FQKEGD
Trigger: ATCTCCTTCCTTCTGAAACCAATGGTGAAACTGAGC...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATGTGGTGGGATCATTaGAAACATCTGACAATTCAC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQMWWDH*KHLTIH
Trigger: GTGAATTGTCAGATGTTTCCAATGATCCCACCACAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTAATTGCTTCTTTTGTTaGGGCACTAGCTACACAGAC +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFNCFFC*GTSYTD
Trigger: GTCTGTGTAGCTAGTGCCCCAACAAAAGAAGCAATT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAAGAAACTGTTGGTGTaGCTGAAGCACTTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSKKLLV*LKHFKG
Trigger: ACCTTTAAAGTGCTTCAGCCACACCAACAGTTTCTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTACATCCTTGTAATCTaGAAGTGGTCCCATGCAAAT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFYILVI*KWSHAN
Trigger: ATTTGCATGGGACCACTTTCAGATTACAAGGATGTA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTTGGTTTGTTTGTTCTaGGTTCCTTTCGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSLVCLF*VPFDFC
Trigger: GCAAAAATCGAAAGGAACTCAGAACAAACAAACCAA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR TCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTGCACTTACAGTAAATaGTTTCAAACCAATGACGCC +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFCTYSK*FQTNDA
Trigger: GGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTCCTCTGTGGTAGCTTaGACAGATATGCAATCATTA +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSSVVA*TDMQSL
Trigger: TAATGATTGCATATCTGTGCAAGCTACCACAGAGGA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTAGTGTAACTATTCTCTaGTTCCATTTTGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSVTIL*FHFAAS
Trigger: ACTCGCTGCAAAATGGAAGCAGAGAATAGTTACACT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTCTGCAGCTAAATACTaGTTTTCTGAAATTGGTTCC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQSAAKY*FSEIGS
Trigger: GGAACCAATTTCAGAAAAGCAGTATTTAGCTGCAGA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTGTGAGTCTAATAATTaGTCTGCAGCTAAATACTGC +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQCESNN*SAAKYC
Trigger: GCAGTATTTAGCTGCAGAGCAATTATTAGACTCACA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGGTCTCCATTTCTAAATaGTCAGTTTCACCATTGGTT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQVSISK*SVSPLV
Trigger: AACCAATGGTGAAACTGAGCATTTAGAAATGGAGAC...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGATTATTTGCACTTTCTaGATCTTCAGCAACAGTGGT +
Preference number: 4 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQIICTF*IFSNSG
Trigger: ACCACTGTTGCTGAAGATCCAGAAAGTGCAAATAAT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTGAAGATGACAAGCACTaGGGACAAATCTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFEDDKH*GQIYFF
Trigger: GAAAAAGTAGATTTGTCCCCAGTGCTTGTCATCTTC...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTAAGGACAGGTACAAATaGCTCACATTGTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFKDRYK*LTLSFA
Trigger: TGCAAAAGACAATGTGAGCCATTTGTACCTGTCCTT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTGGAACCAGTATTCATaGGTCTCTTTCAACCTTATT +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGWNQYS*VSFNLI
Trigger: AATAAGGTTGAAAGAGACCCATGAATACTGGTTCCA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTGTCACTTAAGGATATaGATTCTGATTTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSCHLRI*ILIWAF
Trigger: AAAGGCCCAAATCAGAATCCATATCCTTAAGTGACA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCAGGAGATTGTTAGGGTaGAAAGACAGTTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGRRLLG*KDSLFL
Trigger: AAGAAACAAACTGTCTTTCCACCCTAACAATCTCCT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCTGGTAGACCTCACATaGTACATTTTTGAATTTGTC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGLVDLT*YIFEFV
Trigger: GACAAATTCAAAAATGTACCATGTGAGGTCTACCAG...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTCCACAACAACTCGTTaGGAAATTTCATTACAGTTT +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSSTTTR*EISLQF
Trigger: AAACTGTAATGAAATTTCCCAACGAGTTGTTGTGGA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAAAAGAGGAGTGACTTaGCTGCATTTATTTTTGCTA +
Preference number: 4 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSKRGVT*LHLFLL
Trigger: TAGCAAAAATAAATGCAGCCAAGTCACTCCTCTTTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTTTCTTCTACTTTTATaGAACCAGTATTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGFLLLL*NQYSWV
Trigger: GACCCATGAATACTGGTTCCATAAAAGTAGAAGAAA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTACAATTCACCAGAAGTaGTCTCCATTTCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFTIHQK*SPFLNA
Trigger: AGCATTTAGAAATGGAGACCACTTCTGGTGAATTGT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR GCA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTGTTCCTTTCGATTTTTaGAACTTCTTGTGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFVPFDF*NFLWFH
Trigger: ATGAAACCACAAGAAGTTGCAAAAATCGAAAGGAAC...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp GTGTGGCTGAAGCACTTTAAAGGTTCCTGCAGCTGCGGCTGCAGCTaGAGCTGCAGCAGCTGCAGCGTGCTGCTGCAAAACAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: VWLKHFKGSCSCGCS*SCSSCSVLLQNSVM
Trigger: CATCACACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp CTGTTGGTGTGGCTGAAGCACTTTAAAGGTTCCTGCAGCTGCGGCTaGAGCTGCAGCTGCAGCAGCTGCAGCGTGCTGCTGCAAAACAGT +
Preference number: 5 (lower is better)
Translates to: LLVWLKHFKGSCSCG*SCSCSSCSVLLQNS
Trigger: ACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACACCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp AAGAAACTGTTGGTGTGGCTGAAGCACTTTAAAGGTTCCTGCAGCTaGGGCTGCAGCTGCAGCTGCAGCAGCTGCAGCGTGCTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: KKLLVWLKHFKGSCS*GCSCSCSSCSVLLQ
Trigger: TTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACACCAACAGTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp TTGGGAAAGAAACTGTTGGTGTGGCTGAAGCACTTTAAAGGTTCCTaGAGCTGCGGCTGCAGCTGCAGCTGCAGCAGCTGCAGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: LGKKLLVWLKHFKGS*SCGCSCSCSSCSVL
Trigger: CAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACACCAACAGTTTCTTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp TTTAAAGGTTCCTGCAGCTGCGGCTGCAGCTGCAGCTGCAGCAGCTaGAGCGTGCTGCTGCAAAACAGTGTGATGGATAGTGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: FKGSCSCGCSCSCSS*SVLLQNSVMDSGYR
Trigger: TCTGTAACCACTATCCATCACACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 90 bp GCAGCTGCAGCTGCAGCAGCTGCAGCGTGCTGCTGCAAAACAGTGTaGTGGATAGTGGTTACAGAGGTAGAACATAAGGACTGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAACCCKTV*WIVVTEVEHKDCCK
Trigger: TTTGCAGCAGTCCTTATGTTCTACCTCTGTAACCACTATCCATCACACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 90 bp TGGTTCCCAGGACAAAGCCTCGGTCCTACTGGTCCTACTGAGAGCTaGGGTAATGAGGTTCTGGTGAGAGCTGGGATTTGGGAAAGAAAC +
Preference number: 5 (lower is better)
Translates to: WFPGQSLGPTGPTES*GNEVLVRAGIWERN
Trigger: GTTTCTTTCCCAAATCCCAGCTCTCACCAGAACCTCATTACCTCAGCTCTCAGTAGGACCAGTAGGACCGAGGCTTTGTCCTGGGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 90 bp TGGGAAAGCCAGATGGCTAGGATGAAGAACGGAAGCTGGAATGATTaGCATCTGAGGAGGAGCAACAAAAGTTGGCTGGTTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: WESQMARMKNGSWND*HLRRSNKSWLVPRT
Trigger: TGTCCTGGGAACCAGCCAACTTTTGTTGCTCCTCCTCAGATGCCAATCATTCCAGCTTCCGTTCTTCATCCTAGCCATCTGGCTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTCTTAGCTCAGCCAGCTaGTGCAGGCGTTGGAGTGCC +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSLSSAS*CRRWSA
Trigger: GGCACTCCAACGCCTGCACAAGCTGGCTGAGCTAAG...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTGCGAAAGTGTCCGTaGCTGAGATGCGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQLRKCP*LRCVEL
Trigger: CAGCTCCACGCATCTCAGCAACGGACACTTTCGCAA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGCCCCGGAAAACTCCCTaGATGTTGCGAAAGTGTCCG +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQPRKTP*MLRKCP
Trigger: CGGACACTTTCGCAACATCAAGGGAGTTTTCCGGGG...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGTTTTGTTCCCGTTCTaGCTGAGAGGGCCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSVLFPF*LRGPRK
Trigger: TTTCCGGGGCCCTCTCAGCAAGAACGGGAACAAAAC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 90 bp GGCAGCTGGAGGAAAGGTAAATTTAACCTTGTTGGCCAGCATGTTTaGCTGCAGAATGTGCTGGTAGACCTCACATGGTACATTTTTGAA +
Preference number: 5 (lower is better)
Translates to: GSWRKGKFNLVGQHV*LQNVLVDLTWYIFE
Trigger: TTCAAAAATGTACCATGTGAGGTCTACCAGCACATTCTGCAGCCAAACATGCTGGCCAACAAGGTTAAATTTACCTTTCCTCCAGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTCAGCTTGTGCAGGCGTaGGAGTGCCTTTTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSQLVQA*ECLFLF
Trigger: AAACAGGAAAAGGCACTCCAACGCCTGCACAAGCTG...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 90 bp ATTATAACGCAGCCACTCAGTTGGTGTCTCATTCATCTTTCCTTGTaGAAGGGCCTCAGCCAGTTCATAATGGCAAAGATAGGATTTAGG +
Preference number: 5 (lower is better)
Translates to: IITQPLSWCLIHLSL*KGLSQFIMAKIGFR
Trigger: CCTAAATCCTATCTTTGCCATTATGAACTGGCTGAGGCCCTTCCACAAGGAAAGATGAATGAGACACCAACTGAGTGGCTGCGTTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTCTCATTCATCTTTCCTaGTGGAAGGGCCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFLIHLS*WKGLSQ
Trigger: CTGGCTGAGGCCCTTCCACAAGGAAAGATGAATGAG...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGGTGAGAGCTGGGATTaGGGAAAGAAACTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSGESWD*GKKLLV
Trigger: CACCAACAGTTTCTTTCCCAAATCCCAGCTCTCACC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGAGGAGCAACAAAAGTaGGCTGGTTCCCAGGACAAA +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSEEQQK*AGSQDK
Trigger: TTTGTCCTGGGAACCAGCCAACTTTTGTTGCTCCTC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 90 bp TCTTTCTTTGTGTTCAAGCAGGGTATTGTCAATTGCTTCTTTTGTTaGGGCACTAGCTACACAGACAGATGTGGTGGGATCATTGGAAAC +
Preference number: 5 (lower is better)
Translates to: SFFVFKQGIVNCFFC*GTSYTDRCGGIIGN
Trigger: GTTTCCAATGATCCCACCACATCTGTCTGTGTAGCTAGTGCCCCAACAAAAGAAGCAATTGACAATACCCTGCTTGAACACAAAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTGTGAATCCCCTGGGCTaGATCCCCAACTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFVNPLG*IPNLVI
Trigger: AATAACCAAGTTGGGGATCAAGCCCAGGGGATTCAC...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGGCAGGGTATTGTCAATaGCTTCTTTTGTTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQAGYCQ*LLLLGH
Trigger: GTGCCCCAACAAAAGAAGCAATTGACAATACCCTGC...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp TATATTCTCACTTCTTTCTTTGTGTTCAAGCAGGGTATTGTCAATTaGTTCTTTTGTTGGGGCACTAGCTACACAGACAGATGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: YILTSFFVFKQGIVN*FFCWGTSYTDRCGG
Trigger: CCCACCACATCTGTCTGTGTAGCTAGTGCCCCAACAAAAGAAGCAATTGACAATACCCTGCTTGAACACAAAGAAAGAAGTGAGAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTAAAACTCCCTTGATGTaGCGAAAGTGTCCGTTGCTG +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFKTPLM*RKCPLL
Trigger: CAGCAACGGACACTTTCGCAACATCAAGGGAGTTTT...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTCGAGCAAATTCCCTTaGTTTCAGTTCCTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGSSKFP*FQFLEP
Trigger: AGGCTCAAGGAACTGAAACAAAGGGAATTTGCTCGA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGTAACAGTTGTTGATTaGAACATGGGGCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGVTVVD*NMGPLP
Trigger: TGGAAGTGGCCCCATGTTCAAATCAACAACTGTTAC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTCAGAAGGAAGGAGATaGTTAGGGTGGAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGSEGRR*LGWKDS
Trigger: ACTGTCTTTCCACCCTAACAATCTCCTTCCTTCTGA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGTAAATTTAACCTTGTaGGCCAGCATGTTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSVNLTL*ASMFGC
Trigger: GCAGCCAAACATGCTGGCCAACAAGGTTAAATTTAC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 90 bp AAGGGCCTCAGCCAGTTCATAATGGCAAAGATAGGATTTAGGCTGTaGCTGTCTAAAGTTCCTTTCAATATTAGGCACCTGAAAAGGAAT +
Preference number: 5 (lower is better)
Translates to: KGLSQFIMAKIGFRL*LSKVPFNIRHLKRN
Trigger: ATTCCTTTTCAGGTGCCTAATATTGAAAGGAACTTTAGACAGTCACAGCCTAAATCCTATCTTTGCCATTATGAACTGGCTGAGGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTCACGGACGCTTTCTTaGGAAATGCAAAAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQSRTLS*EMQKKS
Trigger: GCTTTTCTTTTGCATTTCCAAAGAAAGCGTCCGTGA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTTTCCTCTGTGGTAGCTaGCACAGATATGCAATCATT +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSFLCGS*HRYAII
Trigger: AATGATTGCATATCTGTGCAAGCTACCACAGAGGAA...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTATTTTCAACCTCAGTaGTGGATGCCTCGTTATGCT +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQYFQPQ*WMPRYA
Trigger: AGCATAACGAGGCATCCACAACTGAGGTTGAAAATA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCTTCTCTGCTTCCATTTaGCAGCGAGTTTCTGATTCT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGFSASI*QRVSDS
Trigger: AGAATCAGAAACTCGCTGCAAAATGGAAGCAGAGAA...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGATCCTGACTACAGCTaGACATTTTGGTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSDPDYS*TFWFSN
Trigger: GTTGGAAAACCAAAATGTCAAGCTGTAGTCAGGATC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGAGCAACTGAAGTACTaGGTGGCCTCAAAAATTCTT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGEQLKY*VASKIL
Trigger: AAGAATTTTTGAGGCCACCAAGTACTTCAGTTGCTC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTCGTTTCTTTTTAGGCTaGCAGGGAGCAACTGAAGTA +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFRFFLG*QGATEV
Trigger: TACTTCAGTTGCTCCCTGCAAGCCTAAAAAGAAACG...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTGATGTGGTGGGATCATaGGAAACATCTGACAATTCA +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSDVVGS*ETSDNS
Trigger: TGAATTGTCAGATGTTTCCAATGATCCCACCACATC...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTAAGGTAAATTTAACCTaGTTGGCCAGCATGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSKVNLT*LASMFG
Trigger: GCCAAACATGCTGGCCAACAAGGTTAAATTTACCTT...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTTGGGAAAGAAACTGTaGGTGTGGCTGAAGCACTTT +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFLGKKL*VWLKHF
Trigger: AAAGTGCTTCAGCCACACCAACAGTTTCTTTCCCAA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 90 bp GTTGTGGATGCCTCGTTATGCTTAACATTTTCCTCTGTGGTAGCTTaGACAGATATGCAATCATTAGACATGTCAAGAACTGTGGATTTA +
Preference number: 5 (lower is better)
Translates to: VVDASLCLTFSSVVA*TDMQSLDMSRTVDL
Trigger: TAAATCCACAGTTCTTGACATGTCTAATGATTGCATATCTGTGCAAGCTACCACAGAGGAAAATGTTAAGCATAACGAGGCATCCACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGGATCTTCCAGAGCTTTaGCTATGGTATTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQDLPEL*LWYFPS
Trigger: AGAAGGAAAATACCATAGCAAAAGCTCTGGAAGATC...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp GTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTATTTCCACCAGTCAAAAGAGGAGTGACTaGGCTGCATTTATTTTTGCT +
Preference number: 5 (lower is better)
Translates to: VNDFKPMTPCIGQFISTSQKRSD*AAFIFA
Trigger: AGCAAAAATAAATGCAGCCAAGTCACTCCTCTTTTG...ACTGGTGGAAATAAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTCTCACTTCTTTCTTaGTGTTCAAGCAGGGTATTG +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQFSLLS*CSSRVL
Trigger: CAATACCCTGCTTGAACACAAAGAAAGAAGTGAGAA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCATCCACAACAACTCGTaGGGAAATTTCATTACAGTT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGIHNNS*GNFITV
Trigger: AACTGTAATGAAATTTCCCAACGAGTTGTTGTGGAT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGACTGTAGATCTGTGTTaGTTAAGGACAGGTACAAAT +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQTVDLC*LRTGTN
Trigger: ATTTGTACCTGTCCTTAACAAACACAGATCTACAGT...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGATATGGATTCTGATTaGGGCCTTTTATCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGDMDSD*GLLSSN
Trigger: GTTACTTGATAAAAGGCCCAAATCAGAATCCATATC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTCCCAGAATGTATCATaGTTGCATTTGATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQSQNVS*LHLIVH
Trigger: ATGGACAATCAAATGCAACAATGATACATTCTGGGA...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCAGTTCCTTTCGATTTTaGCAACTTCTTGTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGSSFRF*QLLVVS
Trigger: TGAAACCACAAGAAGTTGCAAAAATCGAAAGGAACT...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp TGCATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCGGGTGGAAAGACAGTTaGTTTCTTAATTGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: CIIALTVNDFKPMTPCIGGWKDS*FLNWFV
Trigger: AACAAACCAATTAAGAAACAAACTGTCTTTCCACCC...GCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATCATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGGGTACATTTTTGAATTaGTCATGGTTTTCTAGTGGG +
Preference number: 5 (lower is better)
Translates to: IIALTVNDFKPMTPCIGQGTFLN*SWFSSG
Trigger: CCCACTAGAAAACCATGACAAATTCAAAAATGTACC...CTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS-3UTR CAA 90 bp ATTGCACTTACAGTAAATGATTTCAAACCAATGACGCCATGTATCGGCCAGTTTTCAAAAGCACATCTGTaGGTGAAGATTGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: IALTVNDFKPMTPCIGQFSKAHL*VKIVED
Trigger: ATCTTCAACAATCTTCACCAACAGATGTGCTTTTGA...AAACTGGCCGATACATGGCGTCATTGGTTTGAAATCATTTACTGTAAGTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 72 bp TGGCTGAAGCACTTTAAAGGTTCCTGCAGCTGCGGCTaGAGCTGCAGCTGCAGCAGCTGCAGCGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: WLKHFKGSCSCG*SCSCSSCSVLL
Trigger: CAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS GCA 72 bp TTGGTGTGGCTGAAGCACTTTAAAGGTTCCTGCAGCTaGGGCTGCAGCTGCAGCTGCAGCAGCTGCAGCGTG +
Preference number: 6 (lower is better)
Translates to: LVWLKHFKGSCS*GCSCSCSSCSV
Trigger: CACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 72 bp TGGAATGATTGGCATCTGAGGAGGAGCAACAAAAGTTaGCTGGTTCCCAGGACAAAGCCTCGGTCCTACTGG +
Preference number: 6 (lower is better)
Translates to: WNDWHLRRSNKS*LVPRTKPRSYW
Trigger: CCAGTAGGACCGAGGCTTTGTCCTGGGAACCAGCCAACTTTTGTTGCTCCTCCTCAGATGCCAATCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 72 bp GCTGCAGCAGCTGCAGCGTGCTGCTGCAAAACAGTGTaGTGGATAGTGGTTACAGAGGTAGAACATAAGGAC +
Preference number: 6 (lower is better)
Translates to: AAAAAACCCKTV*WIVVTEVEHKD
Trigger: GTCCTTATGTTCTACCTCTGTAACCACTATCCATCACACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 72 bp AGAGCTGGGATTTGGGAAAGAAACTGTTGGTGTGGCTaGAGCACTTTAAAGGTTCCTGCAGCTGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: RAGIWERNCWCG*STLKVPAAAAA
Trigger: TGCAGCCGCAGCTGCAGGAACCTTTAAAGTGCTTCAGCCACACCAACAGTTTCTTTCCCAAATCCCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 72 bp GGGGCACTAGCTACACAGACAGATGTGGTGGGATCATaGGAAACATCTGACAATTCACCAGAAGTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GALATQTDVVGS*ETSDNSPEVVS
Trigger: GGAGACCACTTCTGGTGAATTGTCAGATGTTTCCAATGATCCCACCACATCTGTCTGTGTAGCTAGTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 72 bp ACGCAGCCACTCAGTTGGTGTCTCATTCATCTTTCCTaGTGGAAGGGCCTCAGCCAGTTCATAATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: TQPLSWCLIHLS*WKGLSQFIMAK
Trigger: CTTTGCCATTATGAACTGGCTGAGGCCCTTCCACAAGGAAAGATGAATGAGACACCAACTGAGTGGCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 72 bp CAGATGGCTAGGATGAAGAACGGAAGCTGGAATGATTaGCATCTGAGGAGGAGCAACAAAAGTTGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: QMARMKNGSWND*HLRRSNKSWLV
Trigger: AACCAGCCAACTTTTGTTGCTCCTCCTCAGATGCCAATCATTCCAGCTTCCGTTCTTCATCCTAGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 72 bp GTGTTCAAGCAGGGTATTGTCAATTGCTTCTTTTGTTaGGGCACTAGCTACACAGACAGATGTGGTGGGATC +
Preference number: 6 (lower is better)
Translates to: VFKQGIVNCFFC*GTSYTDRCGGI
Trigger: GATCCCACCACATCTGTCTGTGTAGCTAGTGCCCCAACAAAAGAAGCAATTGACAATACCCTGCTTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 72 bp CAGCCACTCAGTTGGTGTCTCATTCATCTTTCCTTGTaGAAGGGCCTCAGCCAGTTCATAATGGCAAAGATA +
Preference number: 6 (lower is better)
Translates to: QPLSWCLIHLSL*KGLSQFIMAKI
Trigger: TATCTTTGCCATTATGAACTGGCTGAGGCCCTTCCACAAGGAAAGATGAATGAGACACCAACTGAGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 72 bp AATCTGCCTCTTTTTCGCCTCCGTTTCTTTTTAGGCTaGCAGGGAGCAACTGAAGTACTTGGTGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: NLPLFRLRFFLG*QGATEVLGGLK
Trigger: TTTGAGGCCACCAAGTACTTCAGTTGCTCCCTGCAAGCCTAAAAAGAAACGGAGGCGAAAAAGAGGCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 90 bp TCTTTTGTTGGGGCACTAGCTACACAGACAGATGTGGTGGGATCATaGGAAACATCTGACAATTCACCAGAAGTGGTCTCCATTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SFVGALATQTDVVGS*ETSDNSPEVVSISK
Trigger: TTTAGAAATGGAGACCACTTCTGGTGAATTGTCAGATGTTTCCAATGATCCCACCACATCTGTCTGTGTAGCTAGTGCCCCAACAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS TCA 72 bp ATCAGTGAGTCCTTCTGTAGATACATCCTTGTAATCTaGAAGTGGTCCCATGCAAATGTCTTCCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: ISESFCRYILVI*KWSHANVFLLL
Trigger: CAGAAGCAGGAAGACATTTGCATGGGACCACTTTCAGATTACAAGGATGTATCTACAGAAGGACTCACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 90 bp AGTTGTGGATGCCTCGTTATGCTTAACATTTTCCTCTGTGGTAGCTaGCACAGATATGCAATCATTAGACATGTCAAGAACTGTGGATTT +
Preference number: 6 (lower is better)
Translates to: SCGCLVMLNIFLCGS*HRYAIIRHVKNCGF
Trigger: AAATCCACAGTTCTTGACATGTCTAATGATTGCATATCTGTGCAAGCTACCACAGAGGAAAATGTTAAGCATAACGAGGCATCCACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CAA 72 bp CACAGTAAAAATTTGCCTTCAGATCTTCCAGAGCTTTaGCTATGGTATTTTCCTTCTCAGCATAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: HSKNLPSDLPEL*LWYFPSQHSPE
Trigger: CTCTGGACTATGCTGAGAAGGAAAATACCATAGCAAAAGCTCTGGAAGATCTGAAGGCAAATTTTTACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302277.7
CDS CCA 72 bp TCTTGCTGGTTATTAACTGAATCCACAACAACTCGTTaGGAAATTTCATTACAGTTTTCTCTCACAGTAACA +
Preference number: 6 (lower is better)
Translates to: SCWLLTESTTTR*EISLQFSLTVT
Trigger: TGTTACTGTGAGAGAAAACTGTAATGAAATTTCCCAACGAGTTGTTGTGGATTCAGTTAATAACCAGCAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302277.7