RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000278129

Ensembl transcript IDs: ENST00000621650.2

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACTAAAGGATGTTGAGCAGCGTCCCTGGCCTCTACCCACTACATaGCGGCGGCACCCTTCCTCCAGGCACAGCAACCAAAAATGTCCC +
Preference number: 1 (lower is better)
Translates to: ALKDVEQRPWPLPTT*RRHPSSRHSNQKCP
Trigger: GGGACATTTTTGGTTGCTGTGCCTGGAGGAAGGGTGCCGCCGTCATGTAGTGGGTAGAGGCCAGGGACGCTGCTCAACATCCTTTAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp GGGATGAAGAGAGACGACACCAGAGGTAGTACCTTGGACAGTGGTTaGAGTGGGTTCTGTGAAGCAGTGGGGGCGGACAGCAGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: GMKRDDTRGSTLDSG*SGFCEAVGADSRSE
Trigger: CTCAGACCTGCTGTCCGCCCCCACTGCTTCACAGAACCCACTGCAACCACTGTCCAAGGTACTACCTCTGGTGTCGTCTCTCTTCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp CGTGGGGGCTGGTCACGTAATTGGGTTGGGGGTGTGGTTGAAATGTaGGCAGGAGCCATGCATGCTGCCAAGATGGTGAGGAACAGAACT +
Preference number: 1 (lower is better)
Translates to: RGGWSRNWVGGVVEM*AGAMHAAKMVRNRT
Trigger: AGTTCTGTTCCTCACCATCTTGGCAGCATGCATGGCTCCTGCCCACATTTCAACCACACCCCCAACCCAATTACGTGACCAGCCCCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp CCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGTCACGTAATTaGGTTGGGGGTGTGGTTGAAATGTGGGCAGGAGCCATGCATGCT +
Preference number: 1 (lower is better)
Translates to: PARNAVKFRGGWSRN*VGGVVEMWAGAMHA
Trigger: AGCATGCATGGCTCCTGCCCACATTTCAACCACACCCCCAACCCAATTACGTGACCAGCCCCCACGAAATTTCACAGCATTCCGTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 90 bp AGGACCCCAGCATTTAGGAAGGGTGACGGGAGGTTGAGAAGTCCCTaGAGAGTTAGAAGGAACCCCACAATGCAAGGAGATGGAGCTCTG +
Preference number: 1 (lower is better)
Translates to: RTPAFRKGDGRLRSP*RVRRNPTMQGDGAL
Trigger: CAGAGCTCCATCTCCTTGCATTGTGGGGTTCCTTCTAACTCTTCAGGGACTTCTCAACCTCCCGTCACCCTTCCTAAATGCTGGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp AGGGGAGAGGTCAAGAAGACTGGTTTTCTGGCTTCCATGATGGGATaGCAAGTGGAAACAGCCTCCAGGAAAGGGATCAGGGAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: RGEVKKTGFLASMMG*QVETASRKGIREAE
Trigger: CTCTGCTTCCCTGATCCCTTTCCTGGAGGCTGTTTCCACTTGCCATCCCATCATGGAAGCCAGAAAACCAGTCTTCTTGACCTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp CACAGGCCTGACTTCCAGAGCTGTCTAGAACCATGCTGTCATTTTTaGTCCCACTGCTTCAGAGGGGAGGAGCTTTCCTGTCTGGATTCC +
Preference number: 1 (lower is better)
Translates to: HRPDFQSCLEPCCHF*SHCFRGEELSCLDS
Trigger: GGAATCCAGACAGGAAAGCTCCTCCCCTCTGAAGCAGTGGGACCAAAAATGACAGCATGGTTCTAGACAGCTCTGGAAGTCAGGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 90 bp CTTCCCACACCCCCTTTGAGAACTCAAGGCTTGTTGAGTTCCAGTTaGTTGCTTCATCCCAGCTTACCACCCTGTGGGGCTGCTATAACC +
Preference number: 1 (lower is better)
Translates to: LPTPPLRTQGLLSSS*LLHPSLPPCGAAIT
Trigger: GGTTATAGCAGCCCCACAGGGTGGTAAGCTGGGATGAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTCTCAAAGGGGGTGTGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp GCTGGGCCACTTGGTAGCACATTACTTCTCCTCTTAGGGCCATCCTaGACTGTTGGTGGCAGTGGGGATGAAGTAAGCAAATCCGAAATG +
Preference number: 1 (lower is better)
Translates to: AGPLGSTLLLLLGPS*TVGGSGDEVSKSEM
Trigger: CATTTCGGATTTGCTTACTTCATCCCCACTGCCACCAACAGTGCAGGATGGCCCTAAGAGGAGAAGTAATGTGCTACCAAGTGGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp GACTTCCAGAGCTGTCTAGAACCATGCTGTCATTTTTGGTCCCACTaGTTCAGAGGGGAGGAGCTTTCCTGTCTGGATTCCCAAGCCTGT +
Preference number: 1 (lower is better)
Translates to: DFQSCLEPCCHFWSH*FRGEELSCLDSQAC
Trigger: ACAGGCTTGGGAATCCAGACAGGAAAGCTCCTCCCCTCTGAAGCAGTGGGACCAAAAATGACAGCATGGTTCTAGACAGCTCTGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 90 bp TCCCAAGCCTGTGCCCCAAACTGCTGGTGGAGCAGAAAGGAGGAATaGTCCAGAATAGGGTTTTGGTACCAGACTGTTTGGTTCACACTC +
Preference number: 1 (lower is better)
Translates to: SQACAPNCWWSRKEE*SRIGFWYQTVWFTL
Trigger: GAGTGTGAACCAAACAGTCTGGTACCAAAACCCTATTCTGGATCATTCCTCCTTTCTGCTCCACCAGCAGTTTGGGGCACAGGCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp TGGAAGGTCACGTTCCACATGGGAAGGCCCCTCACAGTATTGCCATaGTCAACATCATACCCTCTACCAGTCCACAAGCAACAGGCTATT +
Preference number: 1 (lower is better)
Translates to: WKVTFHMGRPLTVLP*STSYPLPVHKQQAI
Trigger: AATAGCCTGTTGCTTGTGGACTGGTAGAGGGTATGATGTTGACCATGGCAATACTGTGAGGGGCCTTCCCATGTGGAACGTGACCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 90 bp GGGTTTATACCCAGGTGGCTTCTCCACCTTGGCACTATTGACATTTaGGCTAGAGAATCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAG +
Preference number: 1 (lower is better)
Translates to: GFIPRWLLHLGTIDI*ARESFVEELSRALK
Trigger: CTTTAGTGCCCGGGACAGCTCCTCAACAAAGGATTCTCTAGCTCAAATGTCAATAGTGCCAAGGTGGAGAAGCCACCTGGGTATAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp CGCGCCTGGCCTGACACGGGAAGTTCTGATGCTAATGCGTTCCAATaGTCAACCATTCCAACATGGTTATTCAAATTGCTGTTTTGGGGC +
Preference number: 1 (lower is better)
Translates to: RAWPDTGSSDANAFQ*STIPTWLFKLLFWG
Trigger: GCCCCAAAACAGCAATTTGAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCCCGTGTCAGGCCAGGCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTaGCCTGCTTTGAACTCAGGCTCAGCAGTTTTACCTGCCATTGCT +
Preference number: 1 (lower is better)
Translates to: HFPVEKNMNNQPQGY*PALNSGSAVLPAIA
Trigger: AGCAATGGCAGGTAAAACTGCTGAGCCTGAGTTCAAAGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 90 bp AAGAGGGCACTGAGTTTGATAGATTTGGGACCAACCAACCTCGGGTaGTTGGGAAGCATCATTTCCTTAGAAAGTCAGAAGTCACCCATG +
Preference number: 1 (lower is better)
Translates to: KRALSLIDLGPTNLG*LGSIISLESQKSPM
Trigger: CATGGGTGACTTCTGACTTTCTAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACTCAGTGCCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 90 bp ACTTCTCCTCTTAGGGCCATCCTGCACTGTTGGTGGCAGTGGGGATaGAGTAAGCAAATCCGAAATGTTTACATGGCAAAATCAACAGGA +
Preference number: 1 (lower is better)
Translates to: TSPLRAILHCWWQWG*SKQIRNVYMAKSTG
Trigger: TCCTGTTGATTTTGCCATGTAAACATTTCGGATTTGCTTACTTCATCCCCACTGCCACCAACAGTGCAGGATGGCCCTAAGAGGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 90 bp TCCCAGTGGACAAACATGGTTATATATATATCCAGGGAAGGAGAATaGTGGGGAGGTAGATGGGAGTACCAGCAAAAATATATGACTCAT +
Preference number: 1 (lower is better)
Translates to: SQWTNMVIYISREGE*WGGRWEYQQKYMTH
Trigger: ATGAGTCATATATTTTTGCTGGTACTCCCATCTACCTCCCCACCATTCTCCTTCCCTGGATATATATATAACCATGTTTGTCCACTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp TTCACAGTCCTGGGGATGAAGAGAGACGACACCAGAGGTAGTACCTaGGACAGTGGTTGCAGTGGGTTCTGTGAAGCAGTGGGGGCGGAC +
Preference number: 2 (lower is better)
Translates to: FTVLGMKRDDTRGST*DSGCSGFCEAVGAD
Trigger: GTCCGCCCCCACTGCTTCACAGAACCCACTGCAACCACTGTCCAAGGTACTACCTCTGGTGTCGTCTCTCTTCATCCCCAGGACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGTCAGAAGTCACCCATaGCATTTCTACCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: SFVEELSRALKDVEQRPWVRSHP*HFYPQP
Trigger: GGGCTGGGGGTAGAAATGTCATGGGTGACTTCTGAC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGATGCTGCCAAGATGGTaGGGAACAGAACTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SFVEELSRALKDVEQRPWMLPRW*GTELPP
Trigger: TGGGGGCAGTTCTGTTCCTCACCATCTTGGCAGCAT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGGTGAGGAACAGAACTaGCCCCAGTGGACCACATCA +
Preference number: 2 (lower is better)
Translates to: RGAVTLPCTECCEISWGLGEEQN*PQWTTS
Trigger: TGATGTGGTCCACTGGGGGCAGTTCTGTTCCTCACC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGGCAGGAGCCATGCATaGTGCCAAGATGGTGAGGAA +
Preference number: 2 (lower is better)
Translates to: RGAVTLPCTECCEISWGLGRSHA*CQDGEE
Trigger: TTCCTCACCATCTTGGCAGCATGCATGGCTCCTGCC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCAGCCCCTCCTTCCATaGGTACACTATGTGGACTTA +
Preference number: 2 (lower is better)
Translates to: SFVEELSRALKDVEQRPWQPLLP*VHYVDL
Trigger: TAAGTCCACATAGTGTACTCATGGAAGGAGGGGCTG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCAAGCAACAGGCTATTaGCCTAGGTCTCCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: RGAVTLPCTECCEISWGLQATGY*PRSPGK
Trigger: TTTGCCAGGAGACCTAGGGCAATAGCCTGTTGCTTG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGCTGTGACACTCCCCTaGACGGAATGCTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: SFVEELSRALKDVEQRPWAVTLP*TECCEI
Trigger: AATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp TTTCGGCACACCTCGGGGAGTTGCCCAGTAGCACACAGCAGTTGTTaGGGTCTGAAGCCCAAATCTCAGAAGCACCAGACTGATTTGGTG +
Preference number: 2 (lower is better)
Translates to: FRHTSGSCPVAHSSC*GLKPKSQKHQTDLV
Trigger: CACCAAATCAGTCTGGTGCTTCTGAGATTTGGGCTTCAGACCCAAACAACTGCTGTGTGCTACTGGGCAACTCCCCGAGGTGTGCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAGCATGAGAACTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSMRTA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAGTTCTCATGCT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCAGGACTGGCCATTTTaGGGGCCAAGGTGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRQDWPF*GPRWRE
Trigger: TTCCCTCCACCTTGGCCCCCAAAATGGCCAGTCCTG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp TCTGGGCTGGGTTTATACCCAGGTGGCTTCTCCACCTTGGCACTATaGACATTTGAGCTAGAGAATCCTTTGTTGAGGAGCTGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: SGLGLYPGGFSTLAL*TFELENPLLRSCPG
Trigger: CCCGGGACAGCTCCTCAACAAAGGATTCTCTAGCTCAAATGTCAATAGTGCCAAGGTGGAGAAGCCACCTGGGTATAAACCCAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp CCTTCCCACACCCCCTTTGAGAACTCAAGGCTTGTTGAGTTCCAGTaGATTGCTTCATCCCAGCTTACCACCCTGTGGGGCTGCTATAAC +
Preference number: 2 (lower is better)
Translates to: PSHTPFENSRLVEFQ*IASSQLTTLWGCYN
Trigger: GTTATAGCAGCCCCACAGGGTGGTAAGCTGGGATGAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTCTCAAAGGGGGTGTGGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGACGAGGTCAGGAGTTTaGGATCAGCCTGGCCAACAC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRTRSGV*DQPGQH
Trigger: GTGTTGGCCAGGCTGATCTCAAACTCCTGACCTCGT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTTCAAGCGATTCTCGTaGCTCAGCCTCCCCCAGGTA +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRFKRFS*LSLPQV
Trigger: TACCTGGGGGAGGCTGAGGCACGAGAATCGCTTGAA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGATGGGGTTTCGCCATaGGCCCAGGCTAGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRDGVSP*AQASLK
Trigger: TTTGAGACTAGCCTGGGCCCATGGCGAAACCCCATC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGATCAGCGGTAAGTGTTaGCCTGCCCATTCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRISGKC*PAHSPF
Trigger: GAAGGGGGAATGGGCAGGCCAACACTTACCGCTGAT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTTGTTTGGGGTAGGCTaGGTTTGGGGAGCTTTCGGC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLFGVG*VWGAFG
Trigger: GCCGAAAGCTCCCCAAACCCAGCCTACCCCAAACAA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAGGAGCCATGCATGCTaGCAAGATGGTGAGGAACAG +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRRSHAC*QDGEEQ
Trigger: CTGTTCCTCACCATCTTGGCAGCATGCATGGCTCCT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCCCCGAAGAGGTAAGTaGAGAGAAACGAACTTGGGC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRPRRGK*RETNLG
Trigger: GCCCAAGTTCGTTTCTCTGCACTTACCTCTTCGGGG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGTCTCCTGGCAAAATTaGGCCCACAGTGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: FSRGAVTLPCTECCEISWVSWQN*AHSDKE
Trigger: CTCCTTGTCACTGTGGGCCCAATTTTGCCAGGAGAC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCAGAACTGCCCCCAGTaGACCACATCAACAGATGTG +
Preference number: 2 (lower is better)
Translates to: FSRGAVTLPCTECCEISWQNCPQ*TTSTDV
Trigger: CACATCTGTTGATGTGGTCCACTGGGGGCAGTTCTG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGGCTGGTCACGTAATTaGGTTGGGGGTGTGGTTGAA +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAGWSRN*VGGVVE
Trigger: TTCAACCACACCCCCAACCCAATTACGTGACCAGCC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTGAGCCACCGCGCCTaGCCTGACACGGGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVSHRA*PDTGSS
Trigger: AGAACTTCCCGTGTCAGGCCAGGCGCGGTGGCTCAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTCTAACTCCATGGAGTaGGGAAGGGGAGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSNSME*GRGEVK
Trigger: CTTGACCTCTCCCCTTCCCCACTCCATGGAGTTAGA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGTGAAAAGTGAGAGCTaGCACGGCAACGTTTTGAGG +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRVKSES*HGNVLR
Trigger: CCTCAAAACGTTGCCGTGTCAGCTCTCACTTTTCAC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTTGCAGTGGGTTCTGTaGAGCAGTGGGGGCGGACAG +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLQWVL*SSGGGQ
Trigger: CTGTCCGCCCCCACTGCTTCACAGAACCCACTGCAA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGCACAAACTAATTGCTaGATGCTTGGAATTTACCCA +
Preference number: 2 (lower is better)
Translates to: SFVEELSRALKDVEQRPWAQTNC*MLGIYP
Trigger: TGGGTAAATTCCAAGCATGCAGCAATTAGTTTGTGC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGCTGGAGTGCAGTGGTaGAATCTCGGTTCACTGAAA +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAAGVQW*NLGSLK
Trigger: TTTCAGTGAACCGAGATTGCACCACTGCACTCCAGC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGACCTTGGACAGTGGTTaGAGTGGGTTCTGTGAAGCA +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRTLDSG*SGFCEA
Trigger: TGCTTCACAGAACCCACTGCAACCACTGTCCAAGGT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGCTGAGGCAGGAGAATaGCGTGAACCGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLAEAGE*REPWRW
Trigger: CCACCTCCACGGTTCACGCCATTCTCCTGCCTCAGC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAAATTGGGCCCACAGTaGCAAGGAGAAATACTGCAC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRKLGPQ*QGEILH
Trigger: GTGCAGTATTTCTCCTTGTCACTGTGGGCCCAATTT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGTTGGGGGTGTGGTTaGAATGTGGGCAGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGWGCG*NVGRSH
Trigger: ATGGCTCCTGCCCACATTTCAACCACACCCCCAACC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAGTTTGAGATCAGCCTaGCCAACACCCCATTTCTAC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSLRSA*PTPHFY
Trigger: GTAGAAATGGGGTGTTGGCCAGGCTGATCTCAAACT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTGTCAGCTACATTTCTaGGCTGGGTTTATACCCAGG +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPACQLHF*AGFIPR
Trigger: CCTGGGTATAAACCCAGCCCAGAAATGTAGCTGACA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp AGGGCACTGAGTTTGATAGATTTGGGACCAACCAACCTCGGGTGCTaGGGAAGCATCATTTCCTTAGAAAGTCAGAAGTCACCCATGACA +
Preference number: 2 (lower is better)
Translates to: RALSLIDLGPTNLGC*GSIISLESQKSPMT
Trigger: TGTCATGGGTGACTTCTGACTTTCTAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACTCAGTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCTGCACGGAATGCTGTaGAATTTCGTGGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFLHGML*NFVGAG
Trigger: ACCAGCCCCCACGAAATTTCACAGCATTCCGTGCAG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGAACTCAAGGCTTGTTaGGTTCCAGTTGATTGCTTC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRELKAC*VPVDCF
Trigger: GAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCCAGGAGGTCGAGGCTaGCAAGTGAGCAGTGATTAC +
Preference number: 2 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFPGGRG*QVSSDY
Trigger: GTAATCACTGCTCACTTGGCAGCCTCGACCTCCTGG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTATAATCTCAACACTTTaGGACGCCAAGGTTCGAGAC +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAIISTL*DAKVRD
Trigger: GTCTCGAACCTTGGCGTCCCAAAGTGTTGAGATTAT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTCGAGGCTGCCAAGTaGGCAGTGATTACAACACTG +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVEAAK*AVITTL
Trigger: CAGTGTTGTAATCACTGCTCACTTGGCAGCCTCGAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTTGTTGAGTTCCAGTTaGTTGCTTCATCCCAGCTTA +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLLSSS*LLHPSL
Trigger: TAAGCTGGGATGAAGCAATCAACTGGAACTCAACAA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCCAACCAACCTCGGGTaGTTGGGAAGCATCATTTCC +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLPTNLG*LGSIIS
Trigger: GGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGACAAGGAGAAATACTaGACCAAGTCAGTACACGTT +
Preference number: 2 (lower is better)
Translates to: FSRGAVTLPCTECCEISWDKEKY*TKSVHV
Trigger: AACGTGTACTGACTTGGTGCAGTATTTCTCCTTGTC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCATTGGGTTGGGGGTGTaGTTGAAATGTGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFIGLGV*LKCGQE
Trigger: CTCCTGCCCACATTTCAACCACACCCCCAACCCAAT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTAATGCCAGCATTTTaGGAGACTGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVMPAF*ETEAGR
Trigger: TCTGCCCGCCTCAGTCTCCCAAAATGCTGGCATTAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCCAGAGGTAGTACCTTaGACAGTGGTTGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLPEVVP*TVVAVG
Trigger: ACCCACTGCAACCACTGTCCAAGGTACTACCTCTGG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGCACTATTGACATTTaGGCTAGAGAATCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGTIDI*ARESFV
Trigger: AACAAAGGATTCTCTAGCTCAAATGTCAATAGTGCC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGCAGTTGTTTGGGTCTaGAGCCCAAATCTCAGAAGC +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLAVVWV*SPNLRS
Trigger: GCTTCTGAGATTTGGGCTTCAGACCCAAACAACTGC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAGTTTTACCTGCCATTaGTTTCACACTATCAGTGCA +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASFTCH*FHTISA
Trigger: TGCACTGATAGTGTGAAAGCAATGGCAGGTAAAACT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAAATTTCGTGGGGGCTaGTCACGTAATTGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLKFRGG*SRNWVG
Trigger: CCCAACCCAATTACGTGACCAGCCCCCACGAAATTT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAGAATTGCTTTAACCTaGGAGGCGGAGGTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLRIALT*EAEVVV
Trigger: CACCACAACCTCCGCCTCCCAGGTTAAAGCAATTCT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCCCAGTGGACAAACATaGTTATATATATATCCAGGG +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRPSGQT*LYIYPG
Trigger: CCCTGGATATATATATAACCATGTTTGTCCACTGGG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 90 bp ATGTCACAAAATATGTCGCTAAAGAGGGCACTGAGTTTGATAGATTaGGGACCAACCAACCTCGGGTGCTTGGGAAGCATCATTTCCTTA +
Preference number: 2 (lower is better)
Translates to: MSQNMSLKRALSLID*GPTNLGCLGSIISL
Trigger: TAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACTCAGTGCCCTCTTTAGCGACATATTTTGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGCAGTTTTCAGGGTATaGACTGAGAACCTAACTGGA +
Preference number: 2 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFAVFRV*TENLTG
Trigger: TCCAGTTAGGTTCTCAGTTCATACCCTGAAAACTGC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTCCCAGCAGGTTTGGTaGGACAAAGGGTTTATGTAT +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLSQQVW*DKGFMY
Trigger: ATACATAAACCCTTTGTCTCACCAAACCTGCTGGGA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCACATCAATTATGAATaGTGCAAAACCGTAAAGGAT +
Preference number: 2 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAHINYE*CKTVKD
Trigger: ATCCTTTACGGTTTTGCAGCATTCATAATTGATGTG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTCCTGTGCCAAATTTTaGCTATCTATAAAATGGTAC +
Preference number: 2 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSCAKF*LSIKWY
Trigger: GTACCATTTTATAGATAGGCAAAATTTGGCACAGGA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCTCACAGTATTGCCATaGTCAACATCATACCCTCTA +
Preference number: 2 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLTVLP*STSYPL
Trigger: TAGAGGGTATGATGTTGACCATGGCAATACTGTGAG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp GATGTTGAGCAGCGTCCCTGGCCTCTACCCACTACATaGCGGCGGCACCCTTCCTCCAGGCACAGCAACCAA +
Preference number: 3 (lower is better)
Translates to: DVEQRPWPLPTT*RRHPSSRHSNQ
Trigger: TTGGTTGCTGTGCCTGGAGGAAGGGTGCCGCCGTCATGTAGTGGGTAGAGGCCAGGGACGCTGCTCAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGGGTTGGGGGTGTGGTaGAAATGTGGGCAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: RGAVTLPCTECCEISWGLGLGVW*KCGQEP
Trigger: TGGCTCCTGCCCACATTTCAACCACACCCCCAACCC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp AGAGACGACACCAGAGGTAGTACCTTGGACAGTGGTTaGAGTGGGTTCTGTGAAGCAGTGGGGGCGGACAGC +
Preference number: 3 (lower is better)
Translates to: RDDTRGSTLDSG*SGFCEAVGADS
Trigger: GCTGTCCGCCCCCACTGCTTCACAGAACCCACTGCAACCACTGTCCAAGGTACTACCTCTGGTGTCGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp TTCCAGTTGATTGCTTCATCCCAGCTTACCACCCTGTaGGGCTGCTATAACCTCAGCCAACCCCATGCCCCC +
Preference number: 3 (lower is better)
Translates to: FQLIASSQLTTL*GCYNLSQPHAP
Trigger: GGGGGCATGGGGTTGGCTGAGGTTATAGCAGCCCCACAGGGTGGTAAGCTGGGATGAAGCAATCAACTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp AAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTaGAATTTCGTGGGGGCTGGTCACGTAATTGGGTTG +
Preference number: 3 (lower is better)
Translates to: KRSCDTPLHGML*NFVGAGHVIGL
Trigger: CAACCCAATTACGTGACCAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp AATGCTGTGAAATTTCGTGGGGGCTGGTCACGTAATTaGGTTGGGGGTGTGGTTGAAATGTGGGCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: NAVKFRGGWSRN*VGGVVEMWAGA
Trigger: GGCTCCTGCCCACATTTCAACCACACCCCCAACCCAATTACGTGACCAGCCCCCACGAAATTTCACAGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp CTAGGACCCCAGCATTTAGGAAGGGTGACGGGAGGTTaGGAAGTCCCTGAAGAGTTAGAAGGAACCCCACAA +
Preference number: 3 (lower is better)
Translates to: LGPQHLGRVTGG*EVPEELEGTPQ
Trigger: TTGTGGGGTTCCTTCTAACTCTTCAGGGACTTCTCAACCTCCCGTCACCCTTCCTAAATGCTGGGGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp GGGGAGAGGTCAAGAAGACTGGTTTTCTGGCTTCCATaGTGGGATGGCAAGTGGAAACAGCCTCCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: GERSRRLVFWLP*WDGKWKQPPGK
Trigger: CTTTCCTGGAGGCTGTTTCCACTTGCCATCCCATCATGGAAGCCAGAAAACCAGTCTTCTTGACCTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp CCCCCTTTGAGAACTCAAGGCTTGTTGAGTTCCAGTTaGTTGCTTCATCCCAGCTTACCACCCTGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: PPLRTQGLLSSS*LLHPSLPPCGA
Trigger: AGCCCCACAGGGTGGTAAGCTGGGATGAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTCTCAAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp ATCATACCCTCTACCAGTCCACAAGCAACAGGCTATTaGCCTAGGTCTCCTGGCAAAATTGGGCCCACAGTG +
Preference number: 3 (lower is better)
Translates to: IIPSTSPQATGY*PRSPGKIGPTV
Trigger: CACTGTGGGCCCAATTTTGCCAGGAGACCTAGGGCAATAGCCTGTTGCTTGTGGACTGGTAGAGGGTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGAGCAGACTGCGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLEQTAP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCGCAGTCTGCTC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTTGGTACCAGACTGTTaGGTTCACACTCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLVPDC*VHTLAG
Trigger: CCCAGCCAGAGTGTGAACCAAACAGTCTGGTACCAA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp AGCTGTCTAGAACCATGCTGTCATTTTTGGTCCCACTaGTTCAGAGGGGAGGAGCTTTCCTGTCTGGATTCC +
Preference number: 3 (lower is better)
Translates to: SCLEPCCHFWSH*FRGEELSCLDS
Trigger: GGAATCCAGACAGGAAAGCTCCTCCCCTCTGAAGCAGTGGGACCAAAAATGACAGCATGGTTCTAGACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp AATCACAGGCCTGACTTCCAGAGCTGTCTAGAACCATaGTGTCATTTTTGGTCCCACTGCTTCAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: NHRPDFQSCLEP*CHFWSHCFRGE
Trigger: CTCCCCTCTGAAGCAGTGGGACCAAAAATGACAGCATGGTTCTAGACAGCTCTGGAAGTCAGGCCTGTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp ACGTTCCACATGGGAAGGCCCCTCACAGTATTGCCATaGTCAACATCATACCCTCTACCAGTCCACAAGCAA +
Preference number: 3 (lower is better)
Translates to: TFHMGRPLTVLP*STSYPLPVHKQ
Trigger: TTGCTTGTGGACTGGTAGAGGGTATGATGTTGACCATGGCAATACTGTGAGGGGCCTTCCCATGTGGAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp GTCAAGAAGACTGGTTTTCTGGCTTCCATGATGGGATaGCAAGTGGAAACAGCCTCCAGGAAAGGGATCAGG +
Preference number: 3 (lower is better)
Translates to: VKKTGFLASMMG*QVETASRKGIR
Trigger: CCTGATCCCTTTCCTGGAGGCTGTTTCCACTTGCCATCCCATCATGGAAGCCAGAAAACCAGTCTTCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAAGCACCAGACTGATTaGGTGGTGAGCAGCACAAAG +
Preference number: 3 (lower is better)
Translates to: DHHSTINDLASSPWWTWRKHQTD*VVSSTK
Trigger: CTTTGTGCTGCTCACCACCAAATCAGTCTGGTGCTT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp ATTGCCCTAGGTCTCCTGGCAAAATTGGGCCCACAGTaGCAAGGAGAAATACTGCACCAAGTCAGTACACGT +
Preference number: 3 (lower is better)
Translates to: IALGLLAKLGPQ*QGEILHQVSTR
Trigger: ACGTGTACTGACTTGGTGCAGTATTTCTCCTTGTCACTGTGGGCCCAATTTTGCCAGGAGACCTAGGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp GCATTTAGGAAGGGTGACGGGAGGTTGAGAAGTCCCTaGAGAGTTAGAAGGAACCCCACAATGCAAGGAGAT +
Preference number: 3 (lower is better)
Translates to: AFRKGDGRLRSP*RVRRNPTMQGD
Trigger: ATCTCCTTGCATTGTGGGGTTCCTTCTAACTCTTCAGGGACTTCTCAACCTCCCGTCACCCTTCCTAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp TGTGCCCCAAACTGCTGGTGGAGCAGAAAGGAGGAATaGTCCAGAATAGGGTTTTGGTACCAGACTGTTTGG +
Preference number: 3 (lower is better)
Translates to: CAPNCWWSRKEE*SRIGFWYQTVW
Trigger: CCAAACAGTCTGGTACCAAAACCCTATTCTGGATCATTCCTCCTTTCTGCTCCACCAGCAGTTTGGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp GATGCTAATGCGTTCCAATGCTCAACCATTCCAACATaGTTATTCAAATTGCTGTTTTGGGGCCAGGCGCGG +
Preference number: 3 (lower is better)
Translates to: DANAFQCSTIPT*LFKLLFWGQAR
Trigger: CCGCGCCTGGCCCCAAAACAGCAATTTGAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAGGCAGGAGAATTGCTaGAACCTGGGAGGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLRQENC*NLGGCS
Trigger: ACTGCAACCTCCCAGGTTCAAGCAATTCTCCTGCCT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp CTTAGGGCCATCCTGCACTGTTGGTGGCAGTGGGGATaGAGTAAGCAAATCCGAAATGTTTACATGGCAAAA +
Preference number: 3 (lower is better)
Translates to: LRAILHCWWQWG*SKQIRNVYMAK
Trigger: TTTTGCCATGTAAACATTTCGGATTTGCTTACTTCATCCCCACTGCCACCAACAGTGCAGGATGGCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp CTGCCCTGCTTTGAACTCAGGCTCAGCAGTTTTACCTaGCATTGCTTTCACACTATCAGTGCACAGCAAAAA +
Preference number: 3 (lower is better)
Translates to: LPCFELRLSSFT*HCFHTISAQQK
Trigger: TTTTTGCTGTGCACTGATAGTGTGAAAGCAATGGCAGGTAAAACTGCTGAGCCTGAGTTCAAAGCAGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGACCAACCTCGGGTGCTaGGGAAGCATCATTTCCTTA +
Preference number: 3 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLTNLGC*GSIISL
Trigger: TAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGTGGCTTCTCCACCTaGGCACTATTGACATTTGAG +
Preference number: 3 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGGFST*ALLTFE
Trigger: CTCAAATGTCAATAGTGCCAAGGTGGAGAAGCCACC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGATTGTGAAAATGGTTTaGTCCCAGTGGACAAACATG +
Preference number: 3 (lower is better)
Translates to: DHHSTINDLASSPWWTWRIVKMV*SQWTNM
Trigger: CATGTTTGTCCACTGGGACAAAACCATTTTCACAAT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp CTGAGTTTGATAGATTTGGGACCAACCAACCTCGGGTaGTTGGGAAGCATCATTTCCTTAGAAAGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: LSLIDLGPTNLG*LGSIISLESQK
Trigger: CTTCTGACTTTCTAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCAAGAGGGCACTGAGTTaGATAGATTTGGGACCAACC +
Preference number: 3 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFKRALS*IDLGPT
Trigger: GGTTGGTCCCAAATCTATCAAACTCAGTGCCCTCTT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp TGGCAAAATTGGGCCCACAGTGACAAGGAGAAATACTaGACCAAGTCAGTACACGTTACTCTACAATTTACT +
Preference number: 3 (lower is better)
Translates to: WQNWAHSDKEKY*TKSVHVTLQFT
Trigger: AGTAAATTGTAGAGTAACGTGTACTGACTTGGTGCAGTATTTCTCCTTGTCACTGTGGGCCCAATTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR GCA 72 bp TGCTTTGAACTCAGGCTCAGCAGTTTTACCTGCCATTaGTTTCACACTATCAGTGCACAGCAAAAATGTGAA +
Preference number: 3 (lower is better)
Translates to: CFELRLSSFTCH*FHTISAQQKCE
Trigger: TTCACATTTTTGCTGTGCACTGATAGTGTGAAAGCAATGGCAGGTAAAACTGCTGAGCCTGAGTTCAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTCCACCTTGGCACTATaGACATTTGAGCTAGAGAAT +
Preference number: 3 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLSTLAL*TFELEN
Trigger: ATTCTCTAGCTCAAATGTCAATAGTGCCAAGGTGGA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CCA 72 bp CACCATTCCACCATAAATGACTTAGCCAGTTCCCCATaGTGGACATGGAGGTTCTTTCCAAATTTTTACTTT +
Preference number: 3 (lower is better)
Translates to: HHSTINDLASSP*WTWRFFPNFYF
Trigger: AAAGTAAAAATTTGGAAAGAACCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCTAATTGCTGCATGCTaGGAATTTACCCAGAATTTC +
Preference number: 3 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLIAAC*EFTQNF
Trigger: GAAATTCTGGGTAAATTCCAAGCATGCAGCAATTAG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCGCATGTCACCACACTaGGCTAATTTGTGTATTTTT +
Preference number: 3 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFRMSPH*ANLCIF
Trigger: AAAAATACACAAATTAGCCAAGTGTGGTGACATGCG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR TCA 72 bp AGATGGGAGTACCAGCAAAAATATATGACTCATGTTTaGAAATGTCCACAATACATCCTTAAAGGTTACTCA +
Preference number: 3 (lower is better)
Translates to: RWEYQQKYMTHV*KCPQYILKGYS
Trigger: TGAGTAACCTTTAAGGATGTATTGTGGACATTTTCAAACATGAGTCATATATTTTTGCTGGTACTCCCATCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCCGAACGCCGGACAATaGCGGCCGCACCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLPNAGQ*RPHRRR
Trigger: GCGTCGCCGGTGCGGCCGCCATTGTCCGGCGTTCGG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGCGTGCTTCCGCTGGTaGTGGGCCAGGGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLACFRW*WARDEL
Trigger: CAGCTCATCCCTGGCCCAGCACCAGCGGAAGCACGC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGTGCTGGGCCAGGGATaGGCTGTGCCTGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWVLGQG*AVPEAL
Trigger: AAGGGCTTCAGGCACAGCTCATCCCTGGCCCAGCAC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGATGGCAGCCCTGGGTaGTTCCTCTCTCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLDGSPG*FLSQPP
Trigger: GGGTGGCTGAGAGAGGAACCACCCAGGGCTGCCATC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGCTGGATGGCAGCCCTaGGTGGTTCCTCTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWAGWQP*VVPLSA
Trigger: GGCTGAGAGAGGAACCACCCAGGGCTGCCATCCAGC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCGTGGAGGTGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWRGGGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCACCTCCACG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGGCCTCTCCTCGGTGTaGGTTCTCAGGTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWGLSSV*VLRCRK
Trigger: TTTCCTGCACCTGAGAACTCACACCGAGGAGAGGCC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGCCTGTGCCCCAAACTaGTGGTGGAGCAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLACAPN*WWSRKE
Trigger: CTCCTTTCTGCTCCACCAGCAGTTTGGGGCACAGGC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGACCACCCTGTGGGGCTaGTATAACCTCAGCCAACCC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWTTLWG*YNLSQP
Trigger: GGGTTGGCTGAGGTTATAGCAGCCCCACAGGGTGGT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTCCCTTCCCGTGACATaGGATGGCTCCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLSLPVT*DGSSSG
Trigger: GCCTGAAGAGGAGCCATCCCATGTCACGGGAAGGGA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGACCGGGCTGTTTTCCTaGGGAGCCTGTCTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWTGLFS*GACLLT
Trigger: AGTCAGCAGACAGGCTCCCCAGGAAAACAGCCCGGT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCCCGCGTGCTTCCGCTaGTGCTGGGCCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAPACFR*CWARDE
Trigger: CTCATCCCTGGCCCAGCACCAGCGGAAGCACGCGGG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCAGGACTGGCCATTTTaGGGGCCAAGGTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWQDWPF*GPRWRE
Trigger: TTCCCTCCACCTTGGCCCCCAAAATGGCCAGTCCTG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp GTGGGGGCTGGTCACGTAATTGGGTTGGGGGTGTGGTaGAAATGTGGGCAGGAGCCATGCATGCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VGAGHVIGLGVW*KCGQEPCMLPR
Trigger: TCTTGGCAGCATGCATGGCTCCTGCCCACATTTCAACCACACCCCCAACCCAATTACGTGACCAGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGTCAGAAGTCACCCATaGCATTTCTACCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLVRSHP*HFYPQP
Trigger: GGGCTGGGGGTAGAAATGTCATGGGTGACTTCTGAC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGATGCTGCCAAGATGGTaGGGAACAGAACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLMLPRW*GTELPP
Trigger: TGGGGGCAGTTCTGTTCCTCACCATCTTGGCAGCAT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCTGCACGGAATGCTGTaGAATTTCGTGGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLLHGML*NFVGAG
Trigger: ACCAGCCCCCACGAAATTTCACAGCATTCCGTGCAG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGACGAGGTCAGGAGTTTaGGATCAGCCTGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWTRSGV*DQPGQH
Trigger: GTGTTGGCCAGGCTGATCTCAAACTCCTGACCTCGT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGGCAGGAGAATTGCTTaGACCTGGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWGRRIA*TWEVAV
Trigger: CACTGCAACCTCCCAGGTTCAAGCAATTCTCCTGCC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTCACAGTCCTGGGGATaGAGAGAGACGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLSQSWG*RETTPE
Trigger: CTCTGGTGTCGTCTCTCTTCATCCCCAGGACTGTGA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTTCAAGCGATTCTCGTaGCTCAGCCTCCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWFKRFS*LSLPQV
Trigger: TACCTGGGGGAGGCTGAGGCACGAGAATCGCTTGAA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCCAGGAGGTCGAGGCTaGCAAGTGAGCAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLPGGRG*QVSSDY
Trigger: GTAATCACTGCTCACTTGGCAGCCTCGACCTCCTGG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGGCTCCCAGGCTGGATaGCAGCCCTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAGSQAG*QPWVVP
Trigger: AGGAACCACCCAGGGCTGCCATCCAGCCTGGGAGCC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGCAGAGAAACGAACTTaGGCCATCCACAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLAEKRT*AIHRVL
Trigger: CAGGACCCTGTGGATGGCCCAAGTTCGTTTCTCTGC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTGCTGGATCGCCCAGTaGAGGACAGCGCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRCWIAQ*RTAPEV
Trigger: CACCTCAGGCGCTGTCCTTCACTGGGCGATCCAGCA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGCTACTGCCCTGCTTTaGACTCAGGCTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLATALL*TQAQQF
Trigger: AAACTGCTGAGCCTGAGTTCAAAGCAGGGCAGTAGC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGCTTTCCGGCTGCCCTaGCTTTGCTCCGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWAFRLP*LCSACR
Trigger: TCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGAAGGAACCCCACAATaGAAGGAGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWEGTPQ*KEMELC
Trigger: GCAGAGCTCCATCTCCTTGCATTGTGGGGTTCCTTC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGATCCCGGAAGGTCACTaGTTCCTGAAGCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRIPEGH*FLKPGR
Trigger: GCGGCCCGGCTTCAGGAACCAGTGACCTTCCGGGAT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGAAGCTCAGGACCTATaGAGAGCAGGTGACCAAAGG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWEAQDL*RAGDQR
Trigger: CCTTTGGTCACCTGCTCTCCATAGGTCCTGAGCTTC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGATCTTGACTCAAAGGTaGGTCACAGCCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWILTQR*VTAQGF
Trigger: GAAGCCCTGGGCTGTGACCCACCTTTGAGTCAAGAT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGTGAGCCACCGCGCCTaGCCTGACACGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRVSHRA*PDTGSS
Trigger: AGAACTTCCCGTGTCAGGCCAGGCGCGGTGGCTCAC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTCTAACTCCATGGAGTaGGGAAGGGGAGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSNSME*GRGEVK
Trigger: CTTGACCTCTCCCCTTCCCCACTCCATGGAGTTAGA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp GCACACCTCGGGGAGTTGCCCAGTAGCACACAGCAGTaGTTTGGGTCTGAAGCCCAAATCTCAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: AHLGELPSSTQQ*FGSEAQISEAP
Trigger: TGGTGCTTCTGAGATTTGGGCTTCAGACCCAAACAACTGCTGTGTGCTACTGGGCAACTCCCCGAGGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAGTTATTCTGCTCCTTaGGTGCCAGACTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSYSAP*VPDSGS
Trigger: AGAGCCAGAGTCTGGCACTCAAGGAGCAGAATAACT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGAACTGGTGCTTCCTTaGGGCCAAATTCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLELVLP*GQIPTA
Trigger: AGCAGTTGGAATTTGGCCTCAAGGAAGCACCAGTTC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGTGAAAAGTGAGAGCTaGCACGGCAACGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLVKSES*HGNVLR
Trigger: CCTCAAAACGTTGCCGTGTCAGCTCTCACTTTTCAC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGAGTTGCTGTGAAAAGTaGGAGCTGACACGGCAACGT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLSCCEK*ELTRQR
Trigger: ACGTTGCCGTGTCAGCTCTCACTTTTCACAGCAACT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTTGCAGTGGGTTCTGTaGAGCAGTGGGGGCGGACAG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLQWVL*SSGGGQ
Trigger: CTGTCCGCCCCCACTGCTTCACAGAACCCACTGCAA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGCAGTTGTTTGGGTCTaGAGCCCAAATCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLAVVWV*SPNLRS
Trigger: GCTTCTGAGATTTGGGCTTCAGACCCAAACAACTGC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGATTCTGCTCCTTGAGTaGCAGACTCTGGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLILLLE*QTLALT
Trigger: TGTCAGAGCCAGAGTCTGGCACTCAAGGAGCAGAAT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCAAGCAACAGGCTATTaGCCTAGGTCTCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWQATGY*PRSPGK
Trigger: TTTGCCAGGAGACCTAGGGCAATAGCCTGTTGCTTG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCATTTTTGGTCCCACTaGTTCAGAGGGGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWHFWSH*FRGEEL
Trigger: AAGCTCCTCCCCTCTGAAGCAGTGGGACCAAAAATG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCCCGTGACATGGGATaGCTCCTCTTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASRDMG*LLFRQA
Trigger: GGCCTGCCTGAAGAGGAGCCATCCCATGTCACGGGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCTTTCCCTAACGTGGTaGGATAAGGAGCATCTGTCG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLLSLTW*DKEHLS
Trigger: CGACAGATGCTCCTTATCCCACCACGTTAGGGAAAG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGGCAGGAAAAGGCAAGTaGTCCGAGAGAAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWAGKGK*SERRIS
Trigger: GGAAATCCTTCTCTCGGACCACTTGCCTTTTCCTGC...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAAATTTCGTGGGGGCTaGTCACGTAATTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWKFRGG*SRNWVG
Trigger: CCCAACCCAATTACGTGACCAGCCCCCACGAAATTT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGTTCTGTGAAGCAGTaGGGGCGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGSVKQ*GRTAGL
Trigger: CAGACCTGCTGTCCGCCCCCACTGCTTCACAGAACC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCACCTGGGGAGGGCGTaGAGCACAAGGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWHLGRA*STRWTL
Trigger: TAGAGTCCACCTTGTGCTCCACGCCCTCCCCAGGTG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp CTGGGGATGAAGAGAGACGACACCAGAGGTAGTACCTaGGACAGTGGTTGCAGTGGGTTCTGTGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGMKRDDTRGST*DSGCSGFCEAV
Trigger: CACTGCTTCACAGAACCCACTGCAACCACTGTCCAAGGTACTACCTCTGGTGTCGTCTCTCTTCATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp ACCTCGGGGAGTTGCCCAGTAGCACACAGCAGTTGTTaGGGTCTGAAGCCCAAATCTCAGAAGCACCAGACT +
Preference number: 4 (lower is better)
Translates to: TSGSCPVAHSSC*GLKPKSQKHQT
Trigger: AGTCTGGTGCTTCTGAGATTTGGGCTTCAGACCCAAACAACTGCTGTGTGCTACTGGGCAACTCCCCGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAGCCTGTCTGCTGACTaGCTAAGCTGGAGTTATGTT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSLSAD*LSWSYV
Trigger: AACATAACTCCAGCTTAGTCAGTCAGCAGACAGGCT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCTGGTCTCGATCTCCTaGCCTCGTGATCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPALVSIS*PRDLPI
Trigger: GATGGGCAGATCACGAGGTCAGGAGATCGAGACCAG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGTTTTCTGGCTTCCATaGTGGGATGGCAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLVFWLP*WDGKWK
Trigger: TTTCCACTTGCCATCCCATCATGGAAGCCAGAAAAC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTGGTGGCAGTGGGGATaGAGTAAGCAAATCCGAAAT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWWWQWG*SKQIRN
Trigger: ATTTCGGATTTGCTTACTTCATCCCCACTGCCACCA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGTGTGGATGCGCTCATaGTGGACGAGGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRVWMRS*WTREEF
Trigger: GAACTCCTCCCTCGTCCAGCATGAGCGCATCCACAC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCTCTTAGGGCCATCCTaGACTGTTGGTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWLLGPS*TVGGSG
Trigger: CCCACTGCCACCAACAGTGCAGGATGGCCCTAAGAG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTGGATGCGCTCATGCTaGACGAGGGAGGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAWMRSC*TREEFW
Trigger: CCAGAACTCCTCCCTCGTCCAGCATGAGCGCATCCA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGGGGCTGCTCCTCTCTaGTGTGAGTTATCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAGAAPL*CELSGA
Trigger: GGCACCAGATAACTCACACCAGAGAGGAGCAGCCCC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCGCCGGCTTCGCCCATaGGGCTGCTCCTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLRRLRP*GCSSLV
Trigger: CACCAGAGAGGAGCAGCCCCATGGGCGAAGCCGGCG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAGTTTGAGATCAGCCTaGCCAACACCCCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSLRSA*PTPHFY
Trigger: GTAGAAATGGGGTGTTGGCCAGGCTGATCTCAAACT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGACAGAACTATTATTGTaGCAGTGTCGGAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLTELLL*QCRRVQ
Trigger: CTGCACCCTCCGACACTGCCACAATAATAGTTCTGT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGGACCTCTAACTCCATaGAGTGGGGAAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAGPLTP*SGEGER
Trigger: CCTCTCCCCTTCCCCACTCCATGGAGTTAGAGGTCC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp ACCCCCTTTGAGAACTCAAGGCTTGTTGAGTTCCAGTaGATTGCTTCATCCCAGCTTACCACCCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TPFENSRLVEFQ*IASSQLTTLWG
Trigger: GCCCCACAGGGTGGTAAGCTGGGATGAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTCTCAAAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGACAGCGCCTGAGGTaGTCCCCAGACCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGQRLR*SPDQRG
Trigger: GCCTCTCTGGTCTGGGGATCACCTCAGGCGCTGTCC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGTGCTCCTCTCTGGTGTaGGTTATCTGGTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWCSSLV*VIWCRM
Trigger: CATCCGGCACCAGATAACTCACACCAGAGAGGAGCA...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAGCAGGTCTGAGGTGTaGGCTGCCACCAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASRSEV*AATKGI
Trigger: TATTCCCTTGGTGGCAGCTCACACCTCAGACCTGCT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAGCAGAAAGGAGGAATaGTCCAGAATAGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSRKEE*SRIGFW
Trigger: CCAAAACCCTATTCTGGATCATTCCTCCTTTCTGCT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTGCTTCAAGTTATTCTaGTCCTTGAGTGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWCFKLF*SLSARL
Trigger: GAGTCTGGCACTCAAGGAGCAGAATAACTTGAAGCA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGTGAGAGCTGGCGTCTaGTCAAAGATCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAVRAGV*SKISLW
Trigger: CCAGAGGCTGATCTTTGAGCAGACGCCAGCTCTCAC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCCAGGTGTGAGTTCCTaGTCGAGGATTGTTCACGCC +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWPGVSS*SRIVHA
Trigger: GGCGTGAACAATCCTCGAGCAGGAACTCACACCTGG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCTCCCCTGCACGGAATaGTGTGAAATTTCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLPCTE*CEISWG
Trigger: CCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCACCCAGGCTGGAGTaGAGAGGCACTATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASPRLE*RGTISA
Trigger: AGCTGAGATAGTGCCTCTGCACTCCAGCCTGGGTGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGATGGGGTTTCGCCATaGGCCCAGGCTAGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWDGVSP*AQASLK
Trigger: TTTGAGACTAGCCTGGGCCCATGGCGAAACCCCATC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGTTCAAATTGCTGTTTTaGGGCCAGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWFKLLF*GQARWL
Trigger: GAGCCACCGCGCCTGGCCCCAAAACAGCAATTTGAA...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTTGTTTGGGGTAGGCTaGGTTTGGGGAGCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPALFGVG*VWGAFG
Trigger: GCCGAAAGCTCCCCAAACCCAGCCTACCCCAAACAA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAAAATGAGTTTTGTTTaGGGTAGGCTGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWKMSFV*GRLGLG
Trigger: CCCCAAACCCAGCCTACCCCAAACAAAACTCATTTT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGGATGAGCTGTGCCTaGAGCCCTTCCCGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGMSCA*SPSRSG
Trigger: ACCACTGCGGGAAGGGCTTCAGGCACAGCTCATCCC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTTTCAAGAGGAGCTGTaGCACTCCCCTGCACGGAAT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAFQEEL*HSPARN
Trigger: ATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGTCGAGGCTGCCAAGTaGGCAGTGATTACAACACTG +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWVEAAK*AVITTL
Trigger: CAGTGTTGTAATCACTGCTCACTTGGCAGCCTCGAC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGCGGGCAGATTACTTaGGGTCATGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGGQIT*GHEFET
Trigger: GGTCTCAAACTCATGACCTCAAGTAATCTGCCCGCC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAGGCCAGAGTTGCTGTaGAAAGTGAGAGCTGACACG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRRPELL*KVRADT
Trigger: CGTGTCAGCTCTCACTTTTCACAGCAACTCTGGCCT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGAGAAGTATCAACTGTaGCCCCTTCAGGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWEKYQL*PLQDWP
Trigger: TGGCCAGTCCTGAAGGGGTCACAGTTGATACTTCTC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGTGCCTTTGCTCCGCCTaGAGAGCTCTTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWCLCSA*RALSGV
Trigger: AACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCA...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGCTCTGCTTTCCGGCTaGCCTGCCTTTGCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFALLSG*PAFAPP
Trigger: AGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGAGGAGCCATGCATGCTaGCAAGATGGTGAGGAACAG +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWRSHAC*QDGEEQ
Trigger: CTGTTCCTCACCATCTTGGCAGCATGCATGGCTCCT...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTGGTGGTGCATGCCTaGAGTCCCAGCTACAGGGGC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVVVHA*SPSYRG
Trigger: GCCCCTGTAGCTGGGACTGCAGGCATGCACCACCAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCCCCGAAGAGGTAAGTaGAGAGAAACGAACTTGGGC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAPRRGK*RETNLG
Trigger: GCCCAAGTTCGTTTCTCTGCACTTACCTCTTCGGGG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCCTTGCGTGATGCTTaGCTTTCAGATCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASLRDA*LSDRGS
Trigger: GGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCAAAGATCAGCCTCTaGCGGCACTCAAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASKISL*RHSKGF
Trigger: GAAGCCCTTTGAGTGCCGCCAGAGGCTGATCTTTGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGTCTCCTGGCAAAATTaGGCCCACAGTGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRVSWQN*AHSDKE
Trigger: CTCCTTGTCACTGTGGGCCCAATTTTGCCAGGAGAC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCAGAACTGCCCCCAGTaGACCACATCAACAGATGTG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRQNCPQ*TTSTDV
Trigger: CACATCTGTTGATGTGGTCCACTGGGGGCAGTTCTG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCACCAAATGTGCCCTaGAGGCAAAAGCACCACCAG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASPNVP*RQKHHQ
Trigger: CTGGTGGTGCTTTTGCCTCCAGGGCACATTTGGTGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCCAGAGGTAGTACCTTaGACAGTGGTTGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWPEVVP*TVVAVG
Trigger: ACCCACTGCAACCACTGTCCAAGGTACTACCTCTGG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTGTGCCCCAAACTGCTaGTGGAGCAGAAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPACAPNC*WSRKEE
Trigger: TTCCTCCTTTCTGCTCCACCAGCAGTTTGGGGCACA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTGAAGGACAGCGCCTaGGGTGATCCCCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVKDSA*GDPQTR
Trigger: TCTGGTCTGGGGATCACCTCAGGCGCTGTCCTTCAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTCCATTCATGCTTTGTaGGAGCTGGCGTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSIHAL*ELASAQ
Trigger: TTGAGCAGACGCCAGCTCTCACAAAGCATGAATGGA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCAGCCCCTCCTTCCATaGGTACACTATGTGGACTTA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAQPLLP*VHYVDL
Trigger: TAAGTCCACATAGTGTACTCATGGAAGGAGGGGCTG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCTCCAATGCCCCCTTTaGGAAAACTCAAGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLQCPL*ENSRLV
Trigger: TACCAGCCTTGAGTTTTCTCAAAGGGGGCATTGGAG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTGTGTGTCCTCTTGTaGCGCCCCAGGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVCVLL*RPREEF
Trigger: GAACTCCTCCCTGGGGCGGCACAAGAGGACACACAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGACAAAGCCAGGGCTCTaGTTTCCGGCTGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLTKPGL*FPAALP
Trigger: AGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTGT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGCTGTGACACTCCCCTaGACGGAATGCTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAAVTLP*TECCEI
Trigger: AATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCTGCAGAGCTCTTTCTaGAGTTCGGGTGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPALQSSF*SSGVDA
Trigger: AGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGAGAATTGCTTTAACCTaGGAGGCGGAGGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRRIALT*EAEVVV
Trigger: CACCACAACCTCCGCCTCCCAGGTTAAAGCAATTCT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCCCAGTGGACAAACATaGTTATATATATATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLPSGQT*LYIYPG
Trigger: CCCTGGATATATATATAACCATGTTTGTCCACTGGG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGCTGAGGCAGGAGAATaGCGTGAACCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFAEAGE*REPWRW
Trigger: CCACCTCCACGGTTCACGCCATTCTCCTGCCTCAGC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCCCCTGACCCATCTGTaGCCAGTGAGACTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFPLTHL*PVRLRG
Trigger: CCCCCTTAGTCTCACTGGCCACAGATGGGTCAGGGG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGGGTAGGCTGGGTTTaGGGAGCTTTCGGCACACCT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGVGWV*GAFGTP
Trigger: AGGTGTGCCGAAAGCTCCCCAAACCCAGCCTACCCC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGAAGCAGAGACTAGTCTaGGTGGAAAATGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLKQRLV*VENEFC
Trigger: ACAAAACTCATTTTCCACCCAGACTAGTCTCTGCTT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCCATGCTGTCATTTTTaGTCCCACTGCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWPCCHF*SHCFRG
Trigger: CCCTCTGAAGCAGTGGGACCAAAAATGACAGCATGG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp GGAATGATCCAGAATAGGGTTTTGGTACCAGACTGTTaGGTTCACACTCTGGCTGGGCCACTTGGTAGCACA +
Preference number: 4 (lower is better)
Translates to: GMIQNRVLVPDC*VHTLAGPLGST
Trigger: TGTGCTACCAAGTGGCCCAGCCAGAGTGTGAACCAAACAGTCTGGTACCAAAACCCTATTCTGGATCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGAATGGATTTGGGCTTaGACTCAGGACGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWREWIWA*TQDAVF
Trigger: GAAAACTGCGTCCTGAGTTCAAGCCCAAATCCATTC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTCACACTGATTACATTTaGAGGGTCTGTCGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAHTDYI*RVCRFG
Trigger: ACCGAAGCGACAGACCCTTCAAATGTAATCAGTGTG...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGTTGGGGGTGTGGTTaGAATGTGGGCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGWGCG*NVGRSH
Trigger: ATGGCTCCTGCCCACATTTCAACCACACCCCCAACC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGCACTAAAGGATGTTaGGCAGCGTCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGTKGC*AASLAS
Trigger: AGAGGCCAGGGACGCTGCTCAACATCCTTTAGTGCC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCAGCATGAGAACTGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFSMRTA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCAGTTCTCATGCT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGTGGATAGCTGAGTTGTaGCACTCCCAGCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWWIAEL*HSQHPK
Trigger: TTTTGGATGCTGGGAGTGTCACAACTCAGCTATCCA...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTGGTCAGCTGGGTGCTaGCATCAAATTCTAACTCCA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAWSAGC*HQILTP
Trigger: TGGAGTTAGAATTTGATGTCAGCACCCAGCTGACCA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCCAAGGTGGAGGGAATaGGGCAATCACAGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFPRWRE*GNHRPD
Trigger: GTCAGGCCTGTGATTGCCTCATTCCCTCCACCTTGG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCATGGTTATTCAAATTaGTGTTTTGGGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWHGYSN*CFGARR
Trigger: GCGCCTGGCCCCAAAACAGCAATTTGAATAACCATG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGAAGGAGATGGAGCTCTaGAAAGAGGTTAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWKEMEL*KEVSRL
Trigger: AAGCCTGCTAACCTCTTTGCAGAGCTCCATCTCCTT...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTATTCCCAGCAAGTTTaGTTAGACAAAGGGTTTATG +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLYSQQV*LDKGFM
Trigger: CATAAACCCTTTGTCTAAGCAAACTTGCTGGGAATA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGGTTTGTCCTGCACCTaGCTTTTTGTGAGTTCCGTA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAGLSCT*LFVSSV
Trigger: TACGGAACTCACAAAAAGCCAGGTGCAGGACAAACC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGACAAAGCTCTGGCTCTaGCATCCTGGAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLTKLWL*HPGGQL
Trigger: GAGCTGGCCTCCAGGATGCCAGAGCCAGAGCTTTGT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTTTCAGTCTTCACTGTaGATGCAATGGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAFQSSL*MQWLEP
Trigger: TGGCTCCAGCCATTGCATCCACAGTGAAGACTGAAA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp AATATGTCGCTAAAGAGGGCACTGAGTTTGATAGATTaGGGACCAACCAACCTCGGGTGCTTGGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: NMSLKRALSLID*GPTNLGCLGSI
Trigger: GATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACTCAGTGCCCTCTTTAGCGACATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp TCTGGGCTGGGTTTATACCCAGGTGGCTTCTCCACCTaGGCACTATTGACATTTGAGCTAGAGAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGLGLYPGGFST*ALLTFELENPL
Trigger: CAAAGGATTCTCTAGCTCAAATGTCAATAGTGCCAAGGTGGAGAAGCCACCTGGGTATAAACCCAGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp AATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTaGAACTCAGGCTCAGCAGTTTTACCTGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: NMNNQPQGYCPA*NSGSAVLPAIA
Trigger: AGCAATGGCAGGTAAAACTGCTGAGCCTGAGTTCAAAGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGCCCTCTTCCTTGCGTaGTGCTTGGCTTTCAGATCG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFALFLA*CLAFRS
Trigger: CGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGATCCTTCCCTTCCCGTaGCATGGGATGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLILPFP*HGMAPL
Trigger: AAGAGGAGCCATCCCATGTCACGGGAAGGGAAGGAT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGGGAGCCTGTCTGCTaGCTGACTAAGCTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGEPVC*LTKLEL
Trigger: TAACTCCAGCTTAGTCAGTCAGCAGACAGGCTCCCC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGACACGGCAACGTTTTaGGGACAACCCCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFDTATF*GQPRRG
Trigger: ACCTCTTCGGGGTTGTCCTCAAAACGTTGCCGTGTC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGAACTCAAGGCTTGTTaGGTTCCAGTTGATTGCTTC +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAELKAC*VPVDCF
Trigger: GAAGCAATCAACTGGAACTCAACAAGCCTTGAGTTC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGTCCCAGCAGGTTTGGTaGGACAAAGGGTTTATGTAT +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRSQQVW*DKGFMY
Trigger: ATACATAAACCCTTTGTCTCACCAAACCTGCTGGGA...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCATAGCTCGGTCCCTTaGTCCAGCTGGGAGATGACT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFHSSVP*SSWEMT
Trigger: AGTCATCTCCCAGCTGGAGCAAGGGACCGAGCTATG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGCAGGCCCTCTTCCTTaGGTGATGCTTGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLAGPLP*VMLGFQ
Trigger: CTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGCAGGAGCCATGCATaGTGCCAAGATGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGRSHA*CQDGEE
Trigger: TTCCTCACCATCTTGGCAGCATGCATGGCTCCTGCC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAAAATTCCAACCAAATaGACTGTGTGGATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SFVEELSRALKDVEQRPWKIPTK*TVWILF
Trigger: AAACAAGATCCACACAGTGCATTTGGTTGGAATTTT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGCTAATGCGTTCCAATaGTCAACCATTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAANAFQ*STIPTW
Trigger: CCATGTTGGAATGGTTGAGCATTGGAACGCATTAGC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCCTGGAGGCCAGCTCTaGCTTGATTGGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLPGGQL*LDWIAE
Trigger: CTCAGCTATCCAATCAAGGCAGAGCTGGCCTCCAGG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTCCTGTGCCAAATTTTaGCTATCTATAAAATGGTAC +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLSCAKF*LSIKWY
Trigger: GTACCATTTTATAGATAGGCAAAATTTGGCACAGGA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGTGAGCCACCACAGCTaGCTGCAAGTTTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAVSHHS*LQVLKM
Trigger: CATTTTTAAAACTTGCAGCCAGCTGTGGTGGCTCAC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGATAATCTCAACACTTTaGGACGCCAAGGTTCGAGAC +
Preference number: 4 (lower is better)
Translates to: DHHSTINDLASSPWWTWRIISTL*DAKVRD
Trigger: GTCTCGAACCTTGGCGTCCCAAAGTGTTGAGATTAT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGATGGTTTTGTCCCAGTaGACAAACATGGTTATATAT +
Preference number: 4 (lower is better)
Translates to: RGAVTLPCTECCEISWGLMVLSQ*TNMVIY
Trigger: ATATATAACCATGTTTGTCCACTGGGACAAAACCAT...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTTTGGATGGCCAAGGTaGGAGGATCGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFFGWPR*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCCACCTTGGCCATCCAAA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCATCAGCGGTAAGTGTTaGCCTGCCCATTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFISGKC*PAHSPF
Trigger: GAAGGGGGAATGGGCAGGCCAACACTTACCGCTGAT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGCACAATGCAAGGAGATaGAGCTCTGCAAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWHNARR*SSAKRL
Trigger: TAACCTCTTTGCAGAGCTCCATCTCCTTGCATTGTG...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGATGTAGATGACACCTaGGGAGGGCGTGGAGCACAA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFDVDDT*GGRGAQ
Trigger: TTGTGCTCCACGCCCTCCCCAGGTGTCATCTACATC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCAGGAGCTTTCCTGTCTaGATTCCCAAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFRSFPV*IPKPVP
Trigger: GGGCACAGGCTTGGGAATCCAGACAGGAAAGCTCCT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCAGCTTACCACCCTGTaGGGCTGCTATAACCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFQLTTL*GCYNLS
Trigger: GCTGAGGTTATAGCAGCCCCACAGGGTGGTAAGCTG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAGGGTGACGGGAGGTTaGGAAGTCCCTGAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLRVTGG*EVPEEL
Trigger: TAACTCTTCAGGGACTTCTCAACCTCCCGTCACCCT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCAGGCAATCACAGGCCTaGCTTCCAGAGCTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFRQSQA*LPELSR
Trigger: TCTAGACAGCTCTGGAAGTCAGGCCTGTGATTGCCT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTGACAAGGAGAAATACTaGACCAAGTCAGTACACGTT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPADKEKY*TKSVHV
Trigger: AACGTGTACTGACTTGGTGCAGTATTTCTCCTTGTC...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGATTGGGTTGGGGGTGTaGTTGAAATGTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLIGLGV*LKCGQE
Trigger: CTCCTGCCCACATTTCAACCACACCCCCAACCCAAT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGCTGGTCACGTAATTaGGTTGGGGGTGTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGWSRN*VGGVVE
Trigger: TTCAACCACACCCCCAACCCAATTACGTGACCAGCC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGTAATGCCAGCATTTTaGGAGACTGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFVMPAF*ETEAGR
Trigger: TCTGCCCGCCTCAGTCTCCCAAAATGCTGGCATTAC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAGAGGTCAAGAAGACTaGTTTTCTGGCTTCCATGAT +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPARGQED*FSGFHD
Trigger: ATCATGGAAGCCAGAAAACCAGTCTTCTTGACCTCT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTGGTACCAGACTGTTTaGTTCACACTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLWYQTV*FTLWLG
Trigger: GCCCAGCCAGAGTGTGAACCAAACAGTCTGGTACCA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGAGTCTAGTCCAGCCCTaGTTAATCAATTTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWSLVQP*LINLKV
Trigger: AACCTTCAAATTGATTAATCAGGGCTGGACTAGACT...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTCCACAGGGTCCTGTTaGACCTCTAGAGATGAACCA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFSTGSC*TSRDEP
Trigger: TGGTTCATCTCTAGAGGTTCAACAGGACCCTGTGGA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTTGAACCTGGGAGGTTaGAGTGAACCACGTGACAGA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFLNLGG*SEPRDR
Trigger: TCTGTCACGTGGTTCACTGCAACCTCCCAGGTTCAA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCAGTCTTCACTGTGGATaGAATGGCTGGAGCCATAGG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFSLHCG*NGWSHR
Trigger: CCTATGGCTCCAGCCATTGCATCCACAGTGAAGACT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCACCTTGGACAGTGGTTaGAGTGGGTTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFTLDSG*SGFCEA
Trigger: TGCTTCACAGAACCCACTGCAACCACTGTCCAAGGT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAGAAAACAAAATTTATaGGGCAACCCAGAACATCTG +
Preference number: 4 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPARKQNL*GNPEHL
Trigger: CAGATGTTCTGGGTTGCCTCATAAATTTTGTTTTCT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTGCACGGTGAGGTGTaGGTTATGGTTAAACGACTT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVHGEV*VMVKRL
Trigger: AAGTCGTTTAACCATAACGCACACCTCACCGTGCAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTGTCTTTCCCTAACGTaGTGGGATAAGGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLCLSLT*WDKEHL
Trigger: CAGATGCTCCTTATCCCACCACGTTAGGGAAAGACA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCATGCTTTGTGAGAGCTaGCGTCTGCTCAAAGATCAG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFMLCES*RLLKDQ
Trigger: CTGATCTTTGAGCAGACGCCAGCTCTCACAAAGCAT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTGTCAGCTACATTTCTaGGCTGGGTTTATACCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFCQLHF*AGFIPR
Trigger: CCTGGGTATAAACCCAGCCCAGAAATGTAGCTGACA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGAGGACCATCTATGGATaGCTAAAGTATGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: FSRGAVTLPCTECCEISWRTIYG*LKYEEF
Trigger: AAATTCCTCATACTTTAGCCATCCATAGATGGTCCT...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
3UTR CAA 72 bp AGTTTGATAGATTTGGGACCAACCAACCTCGGGTGCTaGGGAAGCATCATTTCCTTAGAAAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLIDLGPTNLGC*GSIISLESQKS
Trigger: TGACTTCTGACTTTCTAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCAAATCTATCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTGTGAGTTCCGTAATTaGAATGGCCTGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFCEFRN*NGLTGI
Trigger: GATTCCAGTCAGGCCATTCCAATTACGGAACTCACA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTTGTTGAGTTCCAGTTaGTTGCTTCATCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLLSSS*LLHPSL
Trigger: TAAGCTGGGATGAAGCAATCAACTGGAACTCAACAA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGTTGATCTTGAACTGGTaGTTCCTTGAGGCCAAATTC +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLILNW*FLEAKF
Trigger: GAATTTGGCCTCAAGGAAGCACCAGTTCAAGATCAA...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCTCACAGTATTGCCATaGTCAACATCATACCCTCTA +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFLTVLP*STSYPL
Trigger: TAGAGGGTATGATGTTGACCATGGCAATACTGTGAG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAGGCTGGTAAAATACTaGGTGGAGAGCACATTGTTA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLRLVKY*VESTLL
Trigger: TAACAATGTGCTCTCCACCCAGTATTTTACCAGCCT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCCTATGTGGATTCTCTaGTGTCAAATAACATGGAAG +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLPMWIL*CQITWK
Trigger: CTTCCATGTTATTTGACATCAGAGAATCCACATAGG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR TCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGCACTATTGACATTTaGGCTAGAGAATCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGTIDI*ARESFV
Trigger: AACAAAGGATTCTCTAGCTCAAATGTCAATAGTGCC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGCACAAACTAATTGCTaGATGCTTGGAATTTACCCA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLAQTNC*MLGIYP
Trigger: TGGGTAAATTCCAAGCATGCAGCAATTAGTTTGTGC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAGTTTTACCTGCCATTaGTTTCACACTATCAGTGCA +
Preference number: 4 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLSFTCH*FHTISA
Trigger: TGCACTGATAGTGTGAAAGCAATGGCAGGTAAAACT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR GCA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCACATCAATTATGAATaGTGCAAAACCGTAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFHINYE*CKTVKD
Trigger: ATCCTTTACGGTTTTGCAGCATTCATAATTGATGTG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 90 bp CTCGGGGTCCATGCTGGATCGCCCAGTGAAGGACAGCGCCTGAGGTaGTCCCCAGACCAGAGAGGCACTCCAGCCAAAGGGACCACCCGA +
Preference number: 5 (lower is better)
Translates to: LGVHAGSPSEGQRLR*SPDQRGTPAKGTTR
Trigger: TCGGGTGGTCCCTTTGGCTGGAGTGCCTCTCTGGTCTGGGGATCACCTCAGGCGCTGTCCTTCACTGGGCGATCCAGCATGGACCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 90 bp TCGTCCTCGGGGTCCATGCTGGATCGCCCAGTGAAGGACAGCGCCTaGGGTGATCCCCAGACCAGAGAGGCACTCCAGCCAAAGGGACCA +
Preference number: 5 (lower is better)
Translates to: SSSGSMLDRPVKDSA*GDPQTREALQPKGP
Trigger: TGGTCCCTTTGGCTGGAGTGCCTCTCTGGTCTGGGGATCACCTCAGGCGCTGTCCTTCACTGGGCGATCCAGCATGGACCCCGAGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 90 bp CGTGACATGGGATGGCTCCTCTTCAGGCAGGCCCTCTTCCTTGCGTaGTGCTTGGCTTTCAGATCGAGGCTCCCAGGCTGGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RDMGWLLFRQALFLA*CLAFRSRLPGWMAA
Trigger: GGCTGCCATCCAGCCTGGGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCCTGAAGAGGAGCCATCCCATGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 90 bp CAGCCCTGGGTGGTTCCTCTCTCAGCCACCCATAGCTCGGTCCCTTaGTCCAGCTGGGAGATGACTTCAGGCTTCGGAAGCTCAGGACCT +
Preference number: 5 (lower is better)
Translates to: QPWVVPLSATHSSVP*SSWEMTSGFGSSGP
Trigger: AGGTCCTGAGCTTCCGAAGCCTGAAGTCATCTCCCAGCTGGAGCAAGGGACCGAGCTATGGGTGGCTGAGAGAGGAACCACCCAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 90 bp CAAAGCCAGGGCTCTGCTTTCCGGCTGCCCTGCCTTTGCTCCGCCTaGAGAGCTCTTTCTGGAGTTCGGGTGTTGATGCTGAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: QSQGSAFRLPCLCSA*RALSGVRVLMLNQV
Trigger: CACCTGGTTCAGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGGAGCAGACTGCGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLEQTAP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCGCAGTCTGCTC...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTGGGGTAGGCTGGGTTaGGGGAGCTTTCGGCACACC +
Preference number: 5 (lower is better)
Translates to: SFVEELSRALKDVEQRPWWGRLG*GSFRHT
Trigger: GGTGTGCCGAAAGCTCCCCAAACCCAGCCTACCCCA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 90 bp ACGTGGTGGGATAAGGAGCATCTGTCGGGAATCCTTCCCTTCCCGTaGCATGGGATGGCTCCTCTTCAGGCAGGCCCTCTTCCTTGCGTG +
Preference number: 5 (lower is better)
Translates to: TWWDKEHLSGILPFP*HGMAPLQAGPLPCV
Trigger: CACGCAAGGAAGAGGGCCTGCCTGAAGAGGAGCCATCCCATGTCACGGGAAGGGAAGGATTCCCGACAGATGCTCCTTATCCCACCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 90 bp TCTTTCTGGAGTTCGGGTGTTGATGCTGAACCAGGTGTGAGTTCCTaGTCGAGGATTGTTCACGCCGCCGGCTTCGCCCATGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFWSSGVDAEPGVSS*SRIVHAAGFAHGAA
Trigger: AGCAGCCCCATGGGCGAAGCCGGCGGCGTGAACAATCCTCGAGCAGGAACTCACACCTGGTTCAGCATCAACACCCGAACTCCAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCCAGTGTGTGTCCTCTaGTGCCGCCCCAGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRPVCVL*CRPREE
Trigger: CTCCTCCCTGGGGCGGCACAAGAGGACACACACTGG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTGCAGAGAAACGAACTaGGGCCATCCACAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLCRETN*GHPQGP
Trigger: AGGACCCTGTGGATGGCCCAAGTTCGTTTCTCTGCA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 90 bp TCAAAGGTGGGTCACAGCCCAGGGCTTCTGTCCATTCATGCTTTGTaGGAGCTGGCGTCTGCTCAAAGATCAGCCTCTGGCGGCACTCAA +
Preference number: 5 (lower is better)
Translates to: SKVGHSPGLLSIHAL*ELASAQRSASGGTQ
Trigger: TTGAGTGCCGCCAGAGGCTGATCTTTGAGCAGACGCCAGCTCTCACAAAGCATGAATGGACAGAAGCCCTGGGCTGTGACCCACCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 90 bp TTTTTGGATGTCAAACAAAGCCAGGGCTCTGCTTTCCGGCTGCCCTaGCTTTGCTCCGCCTGCAGAGCTCTTTCTGGAGTTCGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FLDVKQSQGSAFRLP*LCSACRALSGVRVL
Trigger: CAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTGTTTGACATCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGTCTCTGGGAATGGATTaGGGCTTGAACTCAGGACGC +
Preference number: 5 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSLGMD*GLNSGR
Trigger: GCGTCCTGAGTTCAAGCCCAAATCCATTCCCAGAGA...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCTTCCCACACCCCCTTaGAGAACTCAAGGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLLPTPP*RTQGLL
Trigger: CAACAAGCCTTGAGTTCTCAAAGGGGGTGTGGGAAG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCCTCCAATGCCCCCTTaGAGAAAACTCAAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLPPMPP*RKLKAG
Trigger: ACCAGCCTTGAGTTTTCTCAAAGGGGGCATTGGAGG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGAGTAGCACACAGCAGTaGTTTGGGTCTGAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: SFVEELSRALKDVEQRPWSSTQQ*FGSEAQ
Trigger: TTGGGCTTCAGACCCAAACAACTGCTGTGTGCTACT...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGCAGGCCCTCTTCCTaGCGTGATGCTTGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGRPSS*RDAWLS
Trigger: TGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGACCAGAGGTAGTACCTaGGACAGTGGTTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRTRGST*DSGCSG
Trigger: CCCACTGCAACCACTGTCCAAGGTACTACCTCTGGT...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGCTCTGGCTGGGCCACTaGGTAGCACATTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRLWLGH*VAHYFS
Trigger: GGAGAAGTAATGTGCTACCAAGTGGCCCAGCCAGAG...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCTTGTTGAGTTCCAGTaGATTGCTTCATCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SFVEELSRALKDVEQRPWLVEFQ*IASSQL
Trigger: AAGCTGGGATGAAGCAATCAACTGGAACTCAACAAG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTTCCTGCTCGAGGATaGTTCACGCCGCCGGCTTCG +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVPARG*FTPPAS
Trigger: CGAAGCCGGCGGCGTGAACAATCCTCGAGCAGGAAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAGGCAGGAGAATTGCTaGAACCTGGGAGGTTGCAGT +
Preference number: 5 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPARQENC*NLGGCS
Trigger: ACTGCAACCTCCCAGGTTCAAGCAATTCTCCTGCCT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGTGAGTCCTCTCATCTaGACTCAAAGGTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRVSPLI*TQRWVT
Trigger: TGTGACCCACCTTTGAGTCAAGATGAGAGGACTCAC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGCTAATTGCTGCATGCTaGGAATTTACCCAGAATTTC +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLLIAAC*EFTQNF
Trigger: GAAATTCTGGGTAAATTCCAAGCATGCAGCAATTAG...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCGGGTTGGGGGTGTGGTaGAAATGTGGGCAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFGLGVW*KCGQEP
Trigger: TGGCTCCTGCCCACATTTCAACCACACCCCCAACCC...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGTGGCTTCTCCACCTaGGCACTATTGACATTTGAG +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGGFST*ALLTFE
Trigger: CTCAAATGTCAATAGTGCCAAGGTGGAGAAGCCACC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TCCTTTGTTGAGGAGCTGTCCCGGGCACTAAAGGATGTTGAGCAGCGTCCCTGGCGCATGTCACCACACTaGGCTAATTTGTGTATTTTT +
Preference number: 5 (lower is better)
Translates to: SFVEELSRALKDVEQRPWRMSPH*ANLCIF
Trigger: AAAAATACACAAATTAGCCAAGTGTGGTGACATGCG...CCAGGGACGCTGCTCAACATCCTTTAGTGCCCGGGACAGCTCCTCAACAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGAAGCACCAGACTGATTaGGTGGTGAGCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: FSRGAVTLPCTECCEISWKHQTD*VVSSTK
Trigger: CTTTGTGCTGCTCACCACCAAATCAGTCTGGTGCTT...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGGCCATCCTGCACTGTaGGTGGCAGTGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLGHPAL*VAVGMK
Trigger: CTTCATCCCCACTGCCACCAACAGTGCAGGATGGCC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTCAGGACTGGCCATTTaGGGGGCCAAGGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFSGLAI*GAKVEG
Trigger: TCCCTCCACCTTGGCCCCCAAAATGGCCAGTCCTGA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GATCACCATTCCACCATAAATGACTTAGCCAGTTCCCCATGGTGGACATGGAGGGGAATGGATTTGGGCTaGAACTCAGGACGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: DHHSTINDLASSPWWTWRGMDLG*NSGRSF
Trigger: AAAACTGCGTCCTGAGTTCAAGCCCAAATCCATTCC...CCTCCATGTCCACCATGGGGAACTGGCTAAGTCATTTATGGTGGAATGGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTAAGAGGGCACTGAGTTaGATAGATTTGGGACCAACC +
Preference number: 5 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPAKRALS*IDLGPT
Trigger: GGTTGGTCCCAAATCTATCAAACTCAGTGCCCTCTT...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGAAGCATGAGAACTGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLKHENC*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCAGTTCTCATGCTT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp AGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGGGCTGTGCATTTTCCAAGTTTaGCTACAAAGAACTCGCATT +
Preference number: 5 (lower is better)
Translates to: RGAVTLPCTECCEISWGLCIFQV*LQRTRI
Trigger: AATGCGAGTTCTTTGTAGCAAAACTTGGAAAATGCA...CAGCCCCCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 90 bp ACTTTTCCAAGAGTTAGTCACTACTTTGGAAGGTCACGTTCCACATaGGAAGGCCCCTCACAGTATTGCCATGGTCAACATCATACCCTC +
Preference number: 5 (lower is better)
Translates to: TFPRVSHYFGRSRST*EGPSQYCHGQHHTL
Trigger: GAGGGTATGATGTTGACCATGGCAATACTGTGAGGGGCCTTCCCATGTGGAACGTGACCTTCCAAAGTAGTGACTAACTCTTGGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp TTTTCAAGAGGAGCTGTGACACTCCCCTGCACGGAATGCTGTGAAATTTCGTGGGAGAGTTTTGTAGCCTaGATCTTGAACTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: FSRGAVTLPCTECCEISWESFVA*ILNWCF
Trigger: GAAGCACCAGTTCAAGATCAAGGCTACAAAACTCTC...CCACGAAATTTCACAGCATTCCGTGCAGGGGAGTGTCACAGCTCCTCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCCTAGAGAATCCTTTGTaGAGGAGCTGTCCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFLENPL*RSCPGH
Trigger: GTGCCCGGGACAGCTCCTCAACAAAGGATTCTCTAG...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGATTCAAATTGCTGTTTaGGGGCCAGGCGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLIQIAV*GPGAVA
Trigger: AGCCACCGCGCCTGGCCCCAAAACAGCAATTTGAAT...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 90 bp TTTGTAGGGTTTGTCCTGCACCTGGCTTTTTGTGAGTTCCGTAATTaGAATGGCCTGACTGGAATCTCTGTGACAGTCACTGTTTTCACC +
Preference number: 5 (lower is better)
Translates to: FVGFVLHLAFCEFRN*NGLTGISVTVTVFT
Trigger: GGTGAAAACAGTGACTGTCACAGAGATTCCAGTCAGGCCATTCCAATTACGGAACTCACAAAAAGCCAGGTGCAGGACAAACCCTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp CATTTCCCAGTGGAGAAGAATATGAACAACCAACCTCAGGGCTACTGCCCTGCTTCCACCTTGGCACTATaGACATTTGAGCTAGAGAAT +
Preference number: 5 (lower is better)
Translates to: HFPVEKNMNNQPQGYCPASTLAL*TFELEN
Trigger: ATTCTCTAGCTCAAATGTCAATAGTGCCAAGGTGGA...AGCAGGGCAGTAGCCCTGAGGTTGGTTGTTCATATTCTTCTCCACTGGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTTGGTACCAGACTGTTaGGTTCACACTCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFLVPDC*VHTLAG
Trigger: CCCAGCCAGAGTGTGAACCAAACAGTCTGGTACCAA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCACCAACCTCGGGTGCTaGGGAAGCATCATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFTNLGC*GSIISL
Trigger: TAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGCTCACAGAACTATTATaGTGGCAGTGTCGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLLTELL*WQCRRV
Trigger: CACCCTCCGACACTGCCACAATAATAGTTCTGTGAG...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 90 bp GCAGTTTTCCCTGAGTCTGAGAGTTTTGTAGCCTTGATCTTGAACTaGTGCTTCCTTGAGGCCAAATTCCAACTGCTTCAAGTTATTCTG +
Preference number: 5 (lower is better)
Translates to: AVFPESESFVALILN*CFLEAKFQLLQVIL
Trigger: CAGAATAACTTGAAGCAGTTGGAATTTGGCCTCAAGGAAGCACCAGTTCAAGATCAAGGCTACAAAACTCTCAGACTCAGGGAAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCACATGGTTATTCAAATaGCTGTTTTGGGGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFTWLFK*LFWGQA
Trigger: CGCCTGGCCCCAAAACAGCAATTTGAATAACCATGT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCTTTGTAGCCTTGATCTaGAACTGGTGCTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFFVALI*NWCFLE
Trigger: CTCAAGGAAGCACCAGTTCAAGATCAAGGCTACAAA...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp GGAAGTTCTGATGCTAATGCGTTCCAATGCTCAACCATTCCAACATGGTTATTCATTGTGAAAATGGTTTaGTCCCAGTGGACAAACATG +
Preference number: 5 (lower is better)
Translates to: GSSDANAFQCSTIPTWLFIVKMV*SQWTNM
Trigger: CATGTTTGTCCACTGGGACAAAACCATTTTCACAAT...GAATAACCATGTTGGAATGGTTGAGCATTGGAACGCATTAGCATCAGAACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS-3UTR CAA 90 bp ATCAATTCACATTCCCACTGTAAATGTATAAGAACCCCTCCAATGCCCCCTTTGGTCCTGTGCCAAATTTaGCCTATCTATAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: INSHSHCKCIRTPPMPPLVLCQI*PIYKMV
Trigger: TACCATTTTATAGATAGGCAAAATTTGGCACAGGAC...CAAAGGGGGCATTGGAGGGGTTCTTATACATTTACAGTGGGAATGTGAATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 72 bp GGGTCCATGCTGGATCGCCCAGTGAAGGACAGCGCCTaGGGTGATCCCCAGACCAGAGAGGCACTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GSMLDRPVKDSA*GDPQTREALQP
Trigger: TGGCTGGAGTGCCTCTCTGGTCTGGGGATCACCTCAGGCGCTGTCCTTCACTGGGCGATCCAGCATGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 72 bp CATGCTGGATCGCCCAGTGAAGGACAGCGCCTGAGGTaGTCCCCAGACCAGAGAGGCACTCCAGCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: HAGSPSEGQRLR*SPDQRGTPAKG
Trigger: CCCTTTGGCTGGAGTGCCTCTCTGGTCTGGGGATCACCTCAGGCGCTGTCCTTCACTGGGCGATCCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 72 bp GGATGGCTCCTCTTCAGGCAGGCCCTCTTCCTTGCGTaGTGCTTGGCTTTCAGATCGAGGCTCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GWLLFRQALFLA*CLAFRSRLPGW
Trigger: CCAGCCTGGGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCCTGAAGAGGAGCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 72 bp GGCTCTGCTTTCCGGCTGCCCTGCCTTTGCTCCGCCTaGAGAGCTCTTTCTGGAGTTCGGGTGTTGATGCTG +
Preference number: 6 (lower is better)
Translates to: GSAFRLPCLCSA*RALSGVRVLML
Trigger: CAGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 72 bp ACAAAGCCAGGGCTCTGCTTTCCGGCTGCCCTGCCTTaGCTCCGCCTGCAGAGCTCTTTCTGGAGTTCGGGT +
Preference number: 6 (lower is better)
Translates to: TKPGLCFPAALP*LRLQSSFWSSG
Trigger: ACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 90 bp CTTCCCGTGACATGGGATGGCTCCTCTTCAGGCAGGCCCTCTTCCTaGCGTGATGCTTGGCTTTCAGATCGAGGCTCCCAGGCTGGATGG +
Preference number: 6 (lower is better)
Translates to: LPVTWDGSSSGRPSS*RDAWLSDRGSQAGW
Trigger: CCATCCAGCCTGGGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCCTGAAGAGGAGCCATCCCATGTCACGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp TCCTCTTCAGGCAGGCCCTCTTCCTTGCGTGATGCTTaGCTTTCAGATCGAGGCTCCCAGGCTGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: SSSGRPSSLRDA*LSDRGSQAGWQ
Trigger: CTGCCATCCAGCCTGGGAGCCTCGATCTGAAAGCCAAGCATCACGCAAGGAAGAGGGCCTGCCTGAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp GGAGCATCTGTCGGGAATCCTTCCCTTCCCGTGACATaGGATGGCTCCTCTTCAGGCAGGCCCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GASVGNPSLPVT*DGSSSGRPSSL
Trigger: CAAGGAAGAGGGCCTGCCTGAAGAGGAGCCATCCCATGTCACGGGAAGGGAAGGATTCCCGACAGATGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 90 bp GGATGTCAAACAAAGCCAGGGCTCTGCTTTCCGGCTGCCCTGCCTTaGCTCCGCCTGCAGAGCTCTTTCTGGAGTTCGGGTGTTGATGCT +
Preference number: 6 (lower is better)
Translates to: GCQTKPGLCFPAALP*LRLQSSFWSSGVDA
Trigger: AGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTGTTTGACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 72 bp AGTTCGGGTGTTGATGCTGAACCAGGTGTGAGTTCCTaGTCGAGGATTGTTCACGCCGCCGGCTTCGCCCAT +
Preference number: 6 (lower is better)
Translates to: SSGVDAEPGVSS*SRIVHAAGFAH
Trigger: ATGGGCGAAGCCGGCGGCGTGAACAATCCTCGAGCAGGAACTCACACCTGGTTCAGCATCAACACCCGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS GCA 72 bp GTCAAACAAAGCCAGGGCTCTGCTTTCCGGCTGCCCTaGCTTTGCTCCGCCTGCAGAGCTCTTTCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: VKQSQGSAFRLP*LCSACRALSGV
Trigger: AACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGCCGGAAAGCAGAGCCCTGGCTTTGTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp GCTGCCCTGCCTTTGCTCCGCCTGCAGAGCTCTTTCTaGAGTTCGGGTGTTGATGCTGAACCAGGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: AALPLLRLQSSF*SSGVDAEPGVS
Trigger: ACTCACACCTGGTTCAGCATCAACACCCGAACTCCAGAAAGAGCTCTGCAGGCGGAGCAAAGGCAGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp GACTCTGGCTCTGACACTCCCTGTCTTTCCCTAACGTaGTGGGATAAGGAGCATCTGTCGGGAATCCTTCCC +
Preference number: 6 (lower is better)
Translates to: DSGSDTPCLSLT*WDKEHLSGILP
Trigger: GGGAAGGATTCCCGACAGATGCTCCTTATCCCACCACGTTAGGGAAAGACAGGGAGTGTCAGAGCCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp TCTGGCTCTGACACTCCCTGTCTTTCCCTAACGTGGTaGGATAAGGAGCATCTGTCGGGAATCCTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: SGSDTPCLSLTW*DKEHLSGILPF
Trigger: GAAGGGAAGGATTCCCGACAGATGCTCCTTATCCCACCACGTTAGGGAAAGACAGGGAGTGTCAGAGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 90 bp CTGATTACATTTGAAGGGTCTGTCGCTTCGGTGAGTCCTCTCATCTaGACTCAAAGGTGGGTCACAGCCCAGGGCTTCTGTCCATTCATG +
Preference number: 6 (lower is better)
Translates to: LITFEGSVASVSPLI*TQRWVTAQGFCPFM
Trigger: CATGAATGGACAGAAGCCCTGGGCTGTGACCCACCTTTGAGTCAAGATGAGAGGACTCACCGAAGCGACAGACCCTTCAAATGTAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS TCA 72 bp CTCCCCTCTAGAGATCTCTGGGAATGGATTTGGGCTTaGACTCAGGACGCAGTTTTCCCTGAGTCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: LPSRDLWEWIWA*TQDAVFPESES
Trigger: ACTCTCAGACTCAGGGAAAACTGCGTCCTGAGTTCAAGCCCAAATCCATTCCCAGAGATCTCTAGAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 90 bp CAGGACGCAGTTTTCCCTGAGTCTGAGAGTTTTGTAGCCTTGATCTaGAACTGGTGCTTCCTTGAGGCCAAATTCCAACTGCTTCAAGTT +
Preference number: 6 (lower is better)
Translates to: QDAVFPESESFVALI*NWCFLEAKFQLLQV
Trigger: AACTTGAAGCAGTTGGAATTTGGCCTCAAGGAAGCACCAGTTCAAGATCAAGGCTACAAAACTCTCAGACTCAGGGAAAACTGCGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CCA 72 bp TTTGTCCTGCACCTGGCTTTTTGTGAGTTCCGTAATTaGAATGGCCTGACTGGAATCTCTGTGACAGTCACT +
Preference number: 6 (lower is better)
Translates to: FVLHLAFCEFRN*NGLTGISVTVT
Trigger: AGTGACTGTCACAGAGATTCCAGTCAGGCCATTCCAATTACGGAACTCACAAAAAGCCAGGTGCAGGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621650.2
CDS CAA 72 bp GTTTTCCCTGAGTCTGAGAGTTTTGTAGCCTTGATCTaGAACTGGTGCTTCCTTGAGGCCAAATTCCAACTG +
Preference number: 6 (lower is better)
Translates to: VFPESESFVALI*NWCFLEAKFQL
Trigger: CAGTTGGAATTTGGCCTCAAGGAAGCACCAGTTCAAGATCAAGGCTACAAAACTCTCAGACTCAGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621650.2