RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF793 (Homo sapiens)

Ensembl gene IDs: ENSG00000188227

Ensembl transcript IDs: ENST00000445217.5, ENST00000542455.2, ENST00000586138.5, ENST00000586187.2, ENST00000587143.5, ENST00000587490.5, ENST00000587986.5, ENST00000588578.5, ENST00000589319.5, ENST00000627814.3

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCTGAAGGGAGAGGGGCAGTGAGTCTGAGGGTTAATCAGCAGTaGTTAAGATGGGCCCAGCTCAGCCATTTCCTTCACACCTCCCCA +
Preference number: 1 (lower is better)
Translates to: RAEGRGAVSLRVNQQ*LRWAQLSHFLHTSP
Trigger: TGGGGAGGTGTGAAGGAAATGGCTGAGCTGGGCCCATCTTAACCACTGCTGATTAACCCTCAGACTCACTGCCCCTCTCCCTTCAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR TCA 90 bp AGAGGAGGGCAACTGATAACCGGGATACCACAGTCTCAGGACAGCTaGAGAGCACAGTTTAATGGAGGAACACACTCCAGAGAGCGCCAG +
Preference number: 1 (lower is better)
Translates to: RGGQLITGIPQSQDS*RAQFNGGTHSRERQ
Trigger: CTGGCGCTCTCTGGAGTGTGTTCCTCCATTAAACTGTGCTCTTCAGCTGTCCTGAGACTGTGGTATCCCGGTTATCAGTTGCCCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR GCA 90 bp TGTGCAGAATCTAAGGCACCGCCCCAGACCTACTTAATCAGACTCTaGATTTCAACAAGATGCCCCGGTGATTCCAAACACCTTGGAGCT +
Preference number: 1 (lower is better)
Translates to: CAESKAPPQTYLIRL*ISTRCPGDSKHLGA
Trigger: AGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTGTTGAAATGCAGAGTCTGATTAAGTAGGTCTGGGGCGGTGCCTTAGATTCTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 90 bp TGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTTACTTaGAGCTTGTTAGATGTGCAGAATCTAAGGCACCGCCCCAGACCT +
Preference number: 1 (lower is better)
Translates to: CYPACGSSSGNFGLT*SLLDVQNLRHRPRP
Trigger: AGGTCTGGGGCGGTGCCTTAGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR TCA 90 bp CCAGACCTACTTAATCAGACTCTGCATTTCAACAAGATGCCCCGGTaGTTCCAAACACCTTGGAGCTTAACAAGCACTGGTATAGCAGTC +
Preference number: 1 (lower is better)
Translates to: PDLLNQTLHFNKMPR*FQTPWSLTSTGIAV
Trigger: GACTGCTATACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTGTTGAAATGCAGAGTCTGATTAAGTAGGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 90 bp CAAGATGCCCCGGTGATTCCAAACACCTTGGAGCTTAACAAGCACTaGTATAGCAGTCATCCAAGGGAATATCATGTTGGGCTAGTTAGT +
Preference number: 1 (lower is better)
Translates to: QDAPVIPNTLELNKH*YSSHPREYHVGLVS
Trigger: ACTAACTAGCCCAACATGATATTCCCTTGGATGACTGCTATACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 90 bp TACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTaGCCTTACTTGGAGCTTGTTAGATGTGCAGAATCTAAGGCACCG +
Preference number: 1 (lower is better)
Translates to: YSTLLSSMWVFKWQF*PYLELVRCAESKAP
Trigger: CGGTGCCTTAGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 90 bp CAACATGGCAAAAGGGCTGGTTGTGAGAATCATGTACTCTCAGAATaGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGAACCAA +
Preference number: 1 (lower is better)
Translates to: QHGKRAGCENHVLSE*VSSLRGLHHWKENQ
Trigger: TTGGTTCTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATGATTCTCACAACCAGCCCTTTTGCCATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR TCA 90 bp GCCAGGGAAATAGATAGTAACAGAGTAGCTGGAAAAACGGGAGGCTaGCTAGATACATTCTTGTGGAATTTGCAGTTACGAAATTTTCAG +
Preference number: 1 (lower is better)
Translates to: AREIDSNRVAGKTGG*LDTFLWNLQLRNFQ
Trigger: CTGAAAATTTCGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCTACTCTGTTACTATCTATTTCCCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR GCA 90 bp GATCCCTGTTACAGAAGAAAGAAGGTTAAATGTTATACAGTACCTTaGTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTTACT +
Preference number: 1 (lower is better)
Translates to: DPCYRRKKVKCYTVP*YPACGSSSGNFGLT
Trigger: AGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACATTTAACCTTCTTTCTTCTGTAACAGGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTaGAAAGAGAACCAAGTTATGGAAAACAGAAAATGCAATTGTTCC +
Preference number: 1 (lower is better)
Translates to: HVLSEWVSSLRGLHH*KENQVMENRKCNCS
Trigger: GGAACAATTGCATTTTCTGTTTTCCATAACTTGGTTCTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR TCA 90 bp AAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATaGATGTTAACACCTTCGTGTGTATTCTTCTACACTTTTCTATGT +
Preference number: 1 (lower is better)
Translates to: KVFRKLITLLHQGNQ*MLTPSCVFFYTFLC
Trigger: ACATAGAAAAGTGTAGAAGAATACACACGAAGGTGTTAACATTCATTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCCCAGGGCTCTTCCTaGGTCTCCAAGCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SGKETACDKQRRTLTVVTSQGSS*VSKLRG
Trigger: GCCCCTGAGCTTGGAGACGCAGGAAGAGCCCTGGGA...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR CCA 90 bp CGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACGGATACCCTCGGGGTaGGTGTCAGCAGAACATTCC +
Preference number: 2 (lower is better)
Translates to: RQAAQDPDCRDLSASLSRRIPSG*VSAEHS
Trigger: GGAATGTTCTGCTGACACCCACCCCGAGGGTATCCG...TCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR CCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCCTTCAGACCGTGAGGTaGGCACTCGGGATTGCTCTT +
Preference number: 2 (lower is better)
Translates to: SGKETACDKQRRTLTVVTLQTVR*ALGIAL
Trigger: AAGAGCAATCCCGAGTGCCCACCTCACGGTCTGAAG...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGGCAGGAGAACTGCTTaGACCTGGGAGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYGRRTA*TWEAEV
Trigger: AACCTCAGCCTCCCAGGTTCAAGCAGTTCTCCTGCC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp GACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACCTCGTGTTTGGGTCTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTTAACT +
Preference number: 2 (lower is better)
Translates to: DPDCRDLSASLSRPRVWVSPRLE*SGVILT
Trigger: AGTTAAGATCACGCCACTGCACTCCAGCCTGGGCGA...GACCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCGTGATCTTAACTCACTaGAACCTCCGCTTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: SGKETACDKQRRTLTVVTVILTH*NLRFPG
Trigger: ACCTGGGAAGCGGAGGTTGCAGTGAGTTAAGATCAC...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTGGTCTCCGTCACAATaGCTCAACTCTCCCGCCATA +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYWSPSQ*LNSPAI
Trigger: TATGGCGGGAGAGTTGAGTCATTGTGACGGAGACCA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR TCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCATTGCTCTTCTGATTTaGTTCTGGACGGATACCCTC +
Preference number: 2 (lower is better)
Translates to: SGKETACDKQRRTLTVVTIALLI*FWTDTL
Trigger: GAGGGTATCCGTCCAGAATCAAATCAGAAGAGCAAT...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR TCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCGGGATTGCTCTTCTaGTTTGATTCTGGACGGATA +
Preference number: 2 (lower is better)
Translates to: SGKETACDKQRRTLTVVTSGLLF*FDSGRI
Trigger: TATCCGTCCAGAATCAAATCAGAAGAGCAATCCCGA...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGGGTTTTTCTGTAGGTaGAACCCTCTTCCGTTTGTA +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYGFFCR*NPLPFV
Trigger: TACAAACGGAAGAGGGTTCCACCTACAGAAAAACCC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTCTCCTTTCTCATTCTaGATCAGGCAGTCTTACATG +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYSPFSF*IRQSYM
Trigger: CATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYSVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTCTGCTTCCTCTTCTCTaGTCCCACAGTCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: RGIPKSGPSISPQGTMDILLPLL*SHSHLS
Trigger: AGACAGATGACTGTGGGATCAGAGAAGAGGAAGCAG...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACATGCCAGGGTGTCCATaGTTATGTTTGAGAAAGTAT +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYMPGCP*LCLRKY
Trigger: ATACTTTCTCAAACATAAGCATGGACACCCTGGCAT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCTATGGGCGGTGGGGTTaGATGGAGGTTGAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAYGRWG*MEVEES
Trigger: TGACTCTTCAACCTCCATGCAACCCCACCGCCCATA...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587490.5
3UTR-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACAGAATCACTTACTGCTaGTTTATACATAAGTGCCGG +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYRITYC*FIHKCR
Trigger: CCGGCACTTATGTATAAACCAGCAGTAAGTGATTCT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR CAA 90 bp TTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTTACTaGGAGCTTGTTAGATGTGCAGAATCTAAGGCACCGCCCCAGACC +
Preference number: 2 (lower is better)
Translates to: LLSSMWVFKWQFWPY*ELVRCAESKAPPQT
Trigger: GGTCTGGGGCGGTGCCTTAGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
3UTR-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACATGTACATTGAGGTATaGCTTCTCACCAAACGATTT +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYMYIEV*LLTKRF
Trigger: AAATCGTTTGGTGAGAAGTCATACCTCAATGTACAT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTCAGGCAGTCTTACATaGAGGGAAATCTTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYSGSLT*REILKN
Trigger: ATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp TTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTTACTCCGGGTATCAAGCAATTCTCTTaGCTCAGCCTCCAGACTTTT +
Preference number: 2 (lower is better)
Translates to: FSALLSWMELARLEVTPGIKQFS*LSLQTF
Trigger: AAAAGTCTGGAGGCTGAGGCAAGAGAATTGCTTGAT...ACCCGGAGTAACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR-3UTR GCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCAGTGAGCTGAGATCATaGCATTGCACTCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGSELRS*HCTPAW
Trigger: CCAGGCCGGAGTGCAATGGCATGATCTCAGCTCACT...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGCAGCAGTGGTTAAGATaGGCCCAGCTCAGCCATTTC +
Preference number: 2 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKEQQWLR*AQLSHF
Trigger: GAAATGGCTGAGCTGGGCCCATCTTAACCACTGCTG...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 2 (lower is better)
Translates to: SALQIFPHNLLSLEFADGVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR CAA 90 bp TCAGACTCTGCATTTCAACAAGATGCCCCGGTGATTCCAAACACCTaGGAGCTTAACAAGCACTGGTATAGCAGTCATCCAAGGGAATAT +
Preference number: 2 (lower is better)
Translates to: SDSAFQQDAPVIPNT*ELNKHWYSSHPREY
Trigger: ATATTCCCTTGGATGACTGCTATACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTGTTGAAATGCAGAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: LSHSGSGSLTWREILKNVLNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGGCAGGAGAACTGCTTaGACCTGGGAGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSGRRTA*TWEAEV
Trigger: AACCTCAGCCTCCCAGGTTCAAGCAGTTCTCCTGCC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR CAA 90 bp TCACTACAGACGTGGGGTTTTTCTGTAGGTGGAACCCTCTTCCGTTaGTACAAGAGAGAATCACTTACTGCTGGTTTATACATAAGTGCC +
Preference number: 2 (lower is better)
Translates to: SLQTWGFSVGGTLFR*YKRESLTAGLYISA
Trigger: GGCACTTATGTATAAACCAGCAGTAAGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCCACCTACAGAAAAACCCCACGTCTGTAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYLNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCAAAAGGGCTGGTTGTaGGAATCATGTACTCTCAGA +
Preference number: 2 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGQKGWL*ESCTLR
Trigger: TCTGAGAGTACATGATTCTCACAACCAGCCCTTTTG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGGCCCTCAGGGTACAATaGATATTGCTGGAATGTCTT +
Preference number: 2 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTALRVQ*ILLECL
Trigger: AAGACATTCCAGCAATATCCATTGTACCCTGAGGGC...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTACCATCTCGAACTTCTaGCCTCATGATCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSTISNF*PHDPPA
Trigger: GGCAGGTGGATCATGAGGTCAGAAGTTCGAGATGGT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTGGGCAATGTTTTCTTaGTTATGGCTGCGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSWAMFS*LWLRLA
Trigger: GGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGGTAAGAATACCTGCATaGGAAAGATTCTGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKEVRIPA*ERFWRK
Trigger: CTTTCTCCAGAATCTTTCCCATGCAGGTATTCTTAC...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTACACTCACTACAGACGTaGGGTTTTTCTGTAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LSHSGSGSLTWREILKNVHSLQT*GFSVGG
Trigger: TCCACCTACAGAAAAACCCCACGTCTGTAGTGAGTG...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR TCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAATCTGCATCCCCCAGTaGCTACTGAGGATAAACATT +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQICIPQ*LLRINI
Trigger: AATGTTTATCCTCAGTAGTCACTGGGGGATGCAGAT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCTCTTCTTTGAGATCATaGCAGTTATTAGACCTGATG +
Preference number: 2 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGSSLRS*QLLDLM
Trigger: CATCAGGTCTAATAACTGTCATGATCTCAAAGAAGA...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATGTTCTGTGCGGTGTaGCTTCTGGGTAAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSMFCAV*LLGKGF
Trigger: AAAGCCTTTACCCAGAAGTCACACCGCACAGAACAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR GCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAGAGATGGAATCTTTTTaGTCTGTTGCCCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQEMESF*SVAQVG
Trigger: TCCAACCTGGGCAACAGAGCAAAAAGATTCCATCTC...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGATTTGTAAGAATACCTaGATGGGAAAGATTCTGGAG +
Preference number: 2 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTICKNT*MGKILE
Trigger: CTCCAGAATCTTTCCCATGCAGGTATTCTTACAAAT...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTTCTTGCTTATGGCTaGGCCTGGCCTCAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSFLAYG*AWPQKH
Trigger: ATGCTTTTGAGGCCAGGCGCAGCCATAAGCAAGAAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATGGTTTATACATAAGTaGCGGGTTCTGGGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: LSHSGSGSLTWREILKNVWFIHK*RVLGES
Trigger: GCTTTCACCCAGAACCCGGCACTTATGTATAAACCA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATTGTATGGCTCACTGTaGAATATACCAGAGTATGCC +
Preference number: 2 (lower is better)
Translates to: LSHSGSGSLTWREILKNVLYGSL*NIPEYA
Trigger: GGCATACTCTGGTATATTCCACAGTGAGCCATACAA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 2 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCGGGAAGAGTGTTCTATaGGTAAAGAGGATTCTGAAC +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSGKSVL*VKRILN
Trigger: GTTCAGAATCCTCTTTACTCATAGAACACTCTTCCC...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR GCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATGTCCATTTCATGAATaGCTTCTCTCTGATCAGCTT +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQCPFHE*LLSDQL
Trigger: AAGCTGATCAGAGAGAAGGCATTCATGAAATGGACA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCCTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTTGTATGGCTCACTGTaGAATATACCAGAGTATGCC +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLYGSL*NIPEYA
Trigger: GGCATACTCTGGTATATTCCACAGTGAGCCATACAA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCTCCTTTCTCATTCTaGATCAGGCAGTCTTACATG +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSPFSF*IRQSYM
Trigger: CATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTAAAGTAAAGGCTTTGTaGGCCATATGGTCTCCGTCA +
Preference number: 2 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAKVKAL*AIWSPS
Trigger: TGACGGAGACCATATGGCCCACAAAGCCTTTACTTT...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCGCCAGATGTCTTCTaGAGAAAGTACAGTGAATCA +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSPDVF*RKYSES
Trigger: TGATTCACTGTACTTTCTCCAGAAGACATCTGGCGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATG +
Preference number: 2 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLACRLFL*ILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATGTCTGCTGAGGTTTaGCTTCTGGTAGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYMSAEV*LLVESF
Trigger: AAAGCTTTCTACCAGAAGCCAAACCTCAGCAGACAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATTGTGGTATCACCCGTaGTTCAGTCATTTATGTATT +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQLWYHP*FSHLCI
Trigger: AATACATAAATGACTGAATCACGGGTGATACCACAA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCTCCCGCCATACCATaGAAATATAGACAACATGTA +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSPAIP*KYRQHV
Trigger: TACATGTTGTCTATATTTTCATGGTATGGCGGGAGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATGCCAGGGTGTCCATaGTTATGTTTGAGAAAGTAT +
Preference number: 2 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSMPGCP*LCLRKY
Trigger: ATACTTTCTCAAACATAAGCATGGACACCCTGGCAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTT +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQEILLQ*STHETF
Trigger: AAATGTTTCATGCGTAGACCACTGAAGGAGAATTTC...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCCTTCATGTTATCTTCTaGTATCTAGCATGGCATTTT +
Preference number: 2 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCLHVIF*YLAWHF
Trigger: AAAATGCCATGCTAGATACCAGAAGATAACATGAAG...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
3UTR-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTTTTCGATGTACATTaGGGTATGACTTCTCACCAA +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSFFDVH*GMTSHQ
Trigger: TTGGTGAGAAGTCATACCTCAATGTACATCGAAAAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR GCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATCAACTCATATTCTTTaGCACATTTTGCTATTGGGT +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQSTHIL*HILLLG
Trigger: ACCCAATAGCAAAATGTGGCAAAGAATATGAGTTGA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCGAGAGAATCACTTACTaGTGGTTTATACATAAGTGC +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSERITY*WFIHKC
Trigger: GCACTTATGTATAAACCAGCAGTAAGTGATTCTCTC...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATAATGCTGATTGTATaGCTCACTGTGGAATATACC +
Preference number: 2 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYIMLIV*LTVEYT
Trigger: GGTATATTCCACAGTGAGCCATACAATCAGCATTAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATAATGCTGATTGTATaGCTCACTGTGGAATATACC +
Preference number: 2 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSIMLIV*LTVEYT
Trigger: GGTATATTCCACAGTGAGCCATACAATCAGCATTAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAAAAAACCGCTTTAAGTaGTTCCCATCTATTACAATG +
Preference number: 2 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQKNRFK*FPSITM
Trigger: CATTGTAATAGATGGGAACCACTTAAAGCGGTTTTT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR CCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTCTGAAGCATTTTATCTaGAAAGTTTGTCACAACAGA +
Preference number: 2 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEILKHFI*KVCHNR
Trigger: TCTGTTGTGACAAACTTTCCAGATAAAATGCTTCAG...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR TCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTCTGGAGAAAGTACAGTaGATCATCCTTATGAAACTT +
Preference number: 2 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLALEKVQ*IILMKL
Trigger: AAGTTTCATAAGGATGATTCACTGTACTTTCTCCAG...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR CCA 72 bp GGGAGAGGGGCAGTGAGTCTGAGGGTTAATCAGCAGTaGTTAAGATGGGCCCAGCTCAGCCATTTCCTTCAC +
Preference number: 3 (lower is better)
Translates to: GRGAVSLRVNQQ*LRWAQLSHFLH
Trigger: GTGAAGGAAATGGCTGAGCTGGGCCCATCTTAACCACTGCTGATTAACCCTCAGACTCACTGCCCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp GCAGTGAGTCTGAGGGTTAATCAGCAGTGGTTAAGATaGGCCCAGCTCAGCCATTTCCTTCACACCTCCCCA +
Preference number: 3 (lower is better)
Translates to: AVSLRVNQQWLR*AQLSHFLHTSP
Trigger: TGGGGAGGTGTGAAGGAAATGGCTGAGCTGGGCCCATCTTAACCACTGCTGATTAACCCTCAGACTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGGAACCCTCTTCCGTTaGTACAAGAGAGAATCACTT +
Preference number: 3 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYGTLFR*YKRESL
Trigger: AAGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CAA 90 bp CGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGAATATGTGGTCCCTCATaGACCAAAACATCATTATGT +
Preference number: 3 (lower is better)
Translates to: RQAAQDPDCRDLSASLSRICGPS*TKTSLC
Trigger: ACATAATGATGTTTTGGTCAATGAGGGACCACATAT...TCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR GCA 72 bp TTGCTTATGGCTGCGCCTGGCCTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATATTAACTCGCCAGATG +
Preference number: 3 (lower is better)
Translates to: LLMAAPGLKSMS*RLFLWILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR CCA 72 bp CTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATaGATATTGCTGGAATGTCTTACAGAGCTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: LRVGHPSALRVQ*ILLECLTELKG
Trigger: TCCCTTCAGCTCTGTAAGACATTCCAGCAATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR TCA 72 bp CAACTGATAACCGGGATACCACAGTCTCAGGACAGCTaGAGAGCACAGTTTAATGGAGGAACACACTCCAGA +
Preference number: 3 (lower is better)
Translates to: QLITGIPQSQDS*RAQFNGGTHSR
Trigger: TCTGGAGTGTGTTCCTCCATTAAACTGTGCTCTTCAGCTGTCCTGAGACTGTGGTATCCCGGTTATCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp GCATGTGGGTCTTCAAGTGGCAATTTTGGCCTTACTTaGAGCTTGTTAGATGTGCAGAATCTAAGGCACCGC +
Preference number: 3 (lower is better)
Translates to: ACGSSSGNFGLT*SLLDVQNLRHR
Trigger: GCGGTGCCTTAGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp CCCACACTCACTACAGACGTGGGGTTTTTCTGTAGGTaGAACCCTCTTCCGTTTGTACAAGAGAGAATCACT +
Preference number: 3 (lower is better)
Translates to: PTLTTDVGFFCR*NPLPFVQERIT
Trigger: AGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCCACCTACAGAAAAACCCCACGTCTGTAGTGAGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CAA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCGCCGAGATAGTGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 3 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCAEIVP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCACTATCTCGGC...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCCTGGATGGCACGATCTaGGCTCACCGCAACCTCTAC +
Preference number: 3 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCLDGTI*AHRNLY
Trigger: GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAG...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR CCA 72 bp CCGGTGATTCCAAACACCTTGGAGCTTAACAAGCACTaGTATAGCAGTCATCCAAGGGAATATCATGTTGGG +
Preference number: 3 (lower is better)
Translates to: PVIPNTLELNKH*YSSHPREYHVG
Trigger: CCCAACATGATATTCCCTTGGATGACTGCTATACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGCCGAGATAGTGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 3 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYAEIVP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCACTATCTCGGC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGCCGAGATAGTGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 3 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSAEIVP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCACTATCTCGGC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 3 (lower is better)
Translates to: SALQIFPHNLLSLEFADGIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 3 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR TCA 72 bp CTTAATCAGACTCTGCATTTCAACAAGATGCCCCGGTaGTTCCAAACACCTTGGAGCTTAACAAGCACTGGT +
Preference number: 3 (lower is better)
Translates to: LNQTLHFNKMPR*FQTPWSLTSTG
Trigger: ACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTGTTGAAATGCAGAGTCTGATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp TTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTaGCCTTACTTGGAGCTTGTTAGATGTGCAGAATCT +
Preference number: 3 (lower is better)
Translates to: LLSSMWVFKWQF*PYLELVRCAES
Trigger: AGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp TACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTaGCAATTTTGGCCTTACTTGGAGCTTGTTAGATGT +
Preference number: 3 (lower is better)
Translates to: YSTLLSSMWVFK*QFWPYLELVRC
Trigger: ACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CAA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGAGGGTACAATGGATATaGCTGGAATGTCTTACAGAG +
Preference number: 3 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKERVQWI*LECLTE
Trigger: CTCTGTAAGACATTCCAGCAATATCCATTGTACCCT...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CAA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTACAGAAAGTAAAGGCTTaGTGGGCCATATGGTCTCCG +
Preference number: 3 (lower is better)
Translates to: LSHSGSGSLTWREILKNVQKVKA*WAIWSP
Trigger: CGGAGACCATATGGCCCACAAAGCCTTTACTTTCTG...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 3 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR TCA 72 bp ATAACCCAAAGCACAAACGCAGGGAAGAGTGTTCTATaGGTAAAGAGGATTCTGAACACTGGCACAAATGGA +
Preference number: 3 (lower is better)
Translates to: ITQSTNAGKSVL*VKRILNTGTNG
Trigger: TCCATTTGTGCCAGTGTTCAGAATCCTCTTTACTCATAGAACACTCTTCCCTGCGTTTGTGCTTTGGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR CCA 72 bp AAAAGGGCTGGTTGTGAGAATCATGTACTCTCAGAATaGGTGAGTTCTTTGAGAGGATTACACCACTGGAAA +
Preference number: 3 (lower is better)
Translates to: KRAGCENHVLSE*VSSLRGLHHWK
Trigger: TTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATGATTCTCACAACCAGCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CCA 72 bp TGTCTCCTTTCTCATTCTGGATCAGGCAGTCTTACATaGAGGGAAATCTTGAAAAATGTAGATTCCACATGG +
Preference number: 3 (lower is better)
Translates to: CLLSHSGSGSLT*REILKNVDSTW
Trigger: CCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCGGGAGTGATTTAAATTaGAGTGCAGAAATTAGGGAA +
Preference number: 3 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGGSDLN*SAEIRE
Trigger: TTCCCTAATTTCTGCACTCAAATTTAAATCACTCCC...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATCTGAGTGTCCTGTGTaGGTAAAGTTAATATCTCCC +
Preference number: 3 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQSECPV*VKLISP
Trigger: GGGAGATATTAACTTTACCAACACAGGACACTCAGA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR TCA 72 bp CACCCAGCCTTCAACTGCTTATTTCTAAATAGCTTCTaGGTGTCCTGTGTTGGTAAAGTTAATATCTCCCAA +
Preference number: 3 (lower is better)
Translates to: HPAFNCLFLNSF*VSCVGKVNISQ
Trigger: TTGGGAGATATTAACTTTACCAACACAGGACACTCAGAAGCTATTTAGAAATAAGCAGTTGAAGGCTGGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
3UTR CCA 72 bp TGCAGAGGGATAGAGAGAAAAGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTTCTGAGTTATACAACC +
Preference number: 3 (lower is better)
Translates to: CRGIERKEILLQ*STHETFLSYTT
Trigger: GGTTGTATAACTCAGAAATGTTTCATGCGTAGACCACTGAAGGAGAATTTCTTTTCTCTCTATCCCTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
3UTR-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCACAGCTTTTCTCCTaGGGCAATGTTTTCTTGCTT +
Preference number: 3 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSQLFS*GNVFLL
Trigger: AAGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATTACAGAGCAGAGGTaGGCAAACTTATTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSITEQR*ANLFLR
Trigger: CCTTAAGAATAAGTTTGCCAACCTCTGCTCTGTAAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
3UTR TCA 72 bp AGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATaGATGTTAACACCTTCGTGTGTATTCTTCTACACT +
Preference number: 3 (lower is better)
Translates to: RKLITLLHQGNQ*MLTPSCVFFYT
Trigger: AGTGTAGAAGAATACACACGAAGGTGTTAACATTCATTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCGTGGCAGCCCGGGCATaGTGCCTCACCAATCCATGG +
Preference number: 4 (lower is better)
Translates to: SGKETACDKQRRTLTVVTVAARA*CLTNPW
Trigger: CCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCAC...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp CGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGATCCCAGGGCTCTTCCTaGGTCTCCAAGCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQAAQDPDCRDLSASLSRSQGSS*VSKLRG
Trigger: GCCCCTGAGCTTGGAGACGCAGGAAGAGCCCTGGGA...TCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp GACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACCTCGTGTTTGGGTCGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: DPDCRDLSASLSRPRVWVAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...GACCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp CCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACCTCGTGTTTGGGTCCGGGGGAAGGAGACTGCATaGGACAAGCAGCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: PDCRDLSASLSRPRVWVRGKETA*DKQRRT
Trigger: GGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCC...CCGGACCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGTGGCAGCCCGGGCATaGTGCCTCACCAATCCATGG +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYVAARA*CLTNPW
Trigger: CCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCAC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGATCGCCCAGGCTGGAGTaGAGTGGCGTGATCTTAACT +
Preference number: 4 (lower is better)
Translates to: RQAAQDPDCRDLSASLSRSPRLE*SGVILT
Trigger: AGTTAAGATCACGCCACTGCACTCCAGCCTGGGCGA...TCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp GGGCTCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTCATTCCTCGGCTCCATaGGCTGACTGCCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GLLLLSTAVVDGACKTGSHSSAP*ADCLPL
Trigger: CAAAGGGAGGCAGTCAGCTCATGGAGCCGAGGAATG...ACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCTCAGACAATTTGCCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLRQFA*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGCAAATTGTCTGAG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCGGGGAAGGAGACTGCATGCGACAAGCAGCGCAGGACCCTGACTGTCGTGACCGTCGTGGATGGAGCTTaGAAGACTGGAAGTTACTCC +
Preference number: 4 (lower is better)
Translates to: SGKETACDKQRRTLTVVTVVDGA*KTGSYS
Trigger: GGAGTAACTTCCAGTCTTGCAAGCTCCATCCACGAC...GGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCGCATGCAGTCTCCTTCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTGGATGGCACGATCTTaGCTCACCGCAACCTCTACC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYWMARS*LTATST
Trigger: GGTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTCTTGTCACCCAGGCTaGATGGCACGATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYSCHPG*MARSWL
Trigger: GAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACACCATCTCGAACTTCTaGCCTCATGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYTISNF*PHDPPA
Trigger: GGCAGGTGGATCATGAGGTCAGAAGTTCGAGATGGT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTCACTTACCCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDIHLPQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGGTAAGTG...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CAGAGGTGCAATCAAGTAGAGCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTTCAAGGCCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRCNQVEPRKTLRYGRWGFKAQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGCCTTGAA...ACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTCTACTTGATTGCACCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR GCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGTGGCAGCCCGGGCATaGTGCCTCACCAATCCATGG +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEVAARA*CLTNPW
Trigger: CCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCAC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACAATTCTCCTGCCTCATaGCTCAACCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYNSPAS*LNLPSS
Trigger: GCTACTTGGGAGGTTGAGGCATGAGGCAGGAGAATT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGCAACCTCTACCTCCTaGGTACAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYATSTS*VQAILL
Trigger: CAGGAGAATTGCTTGTACCCAGGAGGTAGAGGTTGC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACATGTTCTGTGCGGTGTaGCTTCTGGGTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYMFCAV*LLGKGF
Trigger: AAAGCCTTTACCCAGAAGTCACACCGCACAGAACAT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCGACTTCATGGAAGATaGACACTGAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYRLHGR*TLRNCS
Trigger: GGAGCAGTTTCTCAGTGTTCATCTTCCATGAAGTCG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGGCAGGAGAATCGCTTaGACCCAGGAGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEGRRIA*TQEEEA
Trigger: AGCCTCCTCCTCCTGGGTTCAAGCGATTCTCCTGCC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp ACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACACTCAGGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: TKHIRAEVQSSRAEKNTQAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...CTGAGTGTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGGATGCTGGCACAGATaGGTATGTCATTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYGCWHR*VCHYLC
Trigger: GCAAAGGTAATGACATACGCATCTGTGCCAGCATCC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CGACAAGCAGCGCAGGACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGAATCAAGCAATTCTCTTaGCTCAGCCTCCAGACTTTT +
Preference number: 4 (lower is better)
Translates to: RQAAQDPDCRDLSASLSRIKQFS*LSLQTF
Trigger: AAAAGTCTGGAGGCTGAGGCAAGAGAATTGCTTGAT...TCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTCCTGCGCTGCTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAGTTTGAGACCAGCCTaGGCGGCACTGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAESLRPA*AALQNP
Trigger: GGGGTTTTGCAGTGCCGCTCAGGCTGGTCTCAAACT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAATGTCTTCCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLMSSQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGAAGACAT...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYCRLFL*ILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACAAAGTAAAGGCTTTGTaGGCCATATGGTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYKVKAL*AIWSPS
Trigger: TGACGGAGACCATATGGCCCACAAAGCCTTTACTTT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYVTESE*ISRNQP
Trigger: AGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGAC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGCGGGAGGTTAAGAGGTaGGAGGATCGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEREVKR*EDRLSP
Trigger: TGGGCTCAAGCGATCCTCCCACCTCTTAACCTCCCG...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp TCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTTACTCTTCAGACCGTGAGGTaGGCACTCGGGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SCFSALLSWMELARLEVTLQTVR*ALGIAL
Trigger: AAGAGCAATCCCGAGTGCCCACCTCACGGTCTGAAG...AGTAACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACGGGAAGAGTGTTCTATaGGTAAAGAGGATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYGKSVL*VKRILN
Trigger: GTTCAGAATCCTCTTTACTCATAGAACACTCTTCCC...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR TCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACAGCAGGTGGACTGCTTaGGCCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNSRWTA*AQEFET
Trigger: GGTCTCAAACTCCTGGGCTCAAGCAGTCCACCTGCT...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGGTGGCAGCCCGGGCATaGTGCCTCACCAATCCATGG +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKEVAARA*CLTNPW
Trigger: CCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCAC...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACATGTCTGCTGAGGTTTaGCTTCTGGTAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYMSAEV*LLVESF
Trigger: AAAGCTTTCTACCAGAAGCCAAACCTCAGCAGACAT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACTGTGGCTCTAAGGGCTaGCAGGAGCTAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNCGSKG*QELESP
Trigger: AGGGCTCTCTAGCTCCTGCCAGCCCTTAGAGCCACA...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACAACCACATCTTTGAATaGCACAGGTATCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYNHIFE*HRYLVF
Trigger: GAATACCAGATACCTGTGTCATTCAAAGATGTGGTT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGTTGAGCCCAGGAGTTTaGGACCAGCCTGAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKELSPGV*DQPERH
Trigger: GTGCCGCTCAGGCTGGTCTCAAACTCCTGGGCTCAA...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTCTCACCAATCCATGGTaGTTCTTCCTGCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDILTNPW*FFLLQS
Trigger: AGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGCCTCACTCTTGGGATaGTGGCACAGATGCGTATGT +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAASLLG*WHRCVC
Trigger: ACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACAGTGAGCTGAGATCATaGCATTGCACTCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNSELRS*HCTPAW
Trigger: CCAGGCCGGAGTGCAATGGCATGATCTCAGCTCACT...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAGGGGTTTCACCATGCTaGCCAGGCTGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLGVSPC*PGCSRT
Trigger: AGTTCGAGAACAGCCTGGCCAGCATGGTGAAACCCC...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAAACCAGCCTCACTCTTaGGATGCTGGCACAGATGCG +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLNQPHS*DAGTDA
Trigger: CGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTT...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCCTCAGATATGGGCGGTaGGGTTGCATGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRALRYGR*GCMEVE
Trigger: TTCAACCTCCATGCAACCCCACCGCCCATATCTGAG...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR TCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCTGGAGAAAGTACAGTaGATCATCCTTATGAAACTT +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLEKVQ*IILMKL
Trigger: AAGTTTCATAAGGATGATTCACTGTACTTTCTCCAG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR TCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGGGTTGCATGGAGGTTaGAGAGTCATTAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAGLHGG*RVINVA
Trigger: AGCCACGTTAATGACTCTTCAACCTCCATGCAACCC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR TCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTCAGTCTCAGGACAGCTaGAGAGCACAGTTTAATGGA +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDIQSQDS*RAQFNG
Trigger: TCCATTAAACTGTGCTCTTCAGCTGTCCTGAGACTG...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTGCAGAAGATTCAAAATaGCCACACGGTAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDIAEDSK*PHGSKA
Trigger: GGCTTTGCTACCGTGTGGTCATTTTGAATCTTCTGC...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCTGTCCGCCACCACTaGGGCCCCGCGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSVRHH*GPARLR
Trigger: TCTGAGCCTCGCGGGGCCTCAGTGGTGGCGGACAGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR TCA 90 bp TTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTTACTCCGGGTATTGCTCTTCTGATTTaGTTCTGGACGGATACCCTC +
Preference number: 4 (lower is better)
Translates to: FSALLSWMELARLEVTPGIALLI*FWTDTL
Trigger: GAGGGTATCCGTCCAGAATCAAATCAGAAGAGCAAT...ACCCGGAGTAACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTATGGGCAATGTTTTCTTaGTTATGGCTGCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLWAMFS*LWLRLA
Trigger: GGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCA...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCTCCCTCCAAGTCAATaGATACTCTTCTATACTTTT +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLPPSQ*ILFYTF
Trigger: AAAAGTATAGAAGAGTATGCATTGACTTGGAGGGAG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAGCCTCACTCTTGGGATaGTGGCACAGATGCGTATGT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLASLLG*WHRCVC
Trigger: ACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGC...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACTATGGGCGGTGGGGTTaGATGGAGGTTGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNYGRWG*MEVEES
Trigger: TGACTCTTCAACCTCCATGCAACCCCACCGCCCATA...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR GCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGCTGAGATCATGCCATTaGACTCCGGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKELRSCH*TPAWAT
Trigger: TGTCGCCCAGGCCGGAGTGCAATGGCATGATCTCAG...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp GACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACCTCGTGTTTGGGTCGAAAATTTTCAGCTCTaGTATAATCTTATGGGACCA +
Preference number: 4 (lower is better)
Translates to: DPDCRDLSASLSRPRVWVENFQL*YNLMGP
Trigger: TGGTCCCATAAGATTATAGCAGAGCTGAAAATTTTC...GACCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CCA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACAATGACACAGGTATCTaGTATTCGATCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYNDTGI*YSIIFC
Trigger: GCAGAAAATGATCGAATACCAGATACCTGTGTCATT...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAAGAGTCATTAACGTaGCTGAAGCTCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAEESLT*LKLSED
Trigger: GTCCTCCGAGAGCTTCAGCCACGTTAATGACTCTTC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR CCA 90 bp GAGCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTGCATGGAGGTTGAAGAGGCATGGGAAAGATTCTaGAGAAAGAGAGATGGACCA +
Preference number: 4 (lower is better)
Translates to: EPRKTLRYGRWGCMEVEEAWERF*RKRDGP
Trigger: TGGTCCATCTCTCTTTCTCCAGAATCTTTCCCATGC...CTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR CCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGCTCCCCACCCCAACATaGAATTCACTGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAELPTPT*NSLLPL
Trigger: AAGAGGAAGCAGTGAATTCCATGTTGGGGTGGGGAG...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp AATCTTATGGGACCACTACTGTATATGTGGTCCCTCATTGACCAAAACATCATTACAGCCACCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLMGPLLYMWSLIDQNIITATQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGTGGCTGT...AATGATGTTTTGGTCAATGAGGGACCACATATACAGTAGTGGTCCCATAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGGAAAAACGGGAGGCTaGCTAGATACATTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEGKTGG*LDTFLW
Trigger: CCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGAGGAGGAGGCTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKERRRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAGCCTCCTCCT...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTTACTTCGGGATTGCTCTTCTaGTTTGATTCTGGACGGATA +
Preference number: 4 (lower is better)
Translates to: SCFSALLSWMELARLEVTSGLLF*FDSGRI
Trigger: TATCCGTCCAGAATCAAATCAGAAGAGCAATCCCGA...AGTAACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp ACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACACTCAGCTCACCAATCCATGGTaGTTCTTCCTGCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: TKHIRAEVQSSRAEKNTQLTNPW*FFLLQS
Trigger: AGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG...CTGAGTGTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR GCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCCCAGAAAGAGCCCCATaGACCCTGAAAATCAAGACA +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAPERAP*TLKIKT
Trigger: TGTCTTGATTTTCAGGGTGCATGGGGCTCTTTCTGG...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGGATGCTGGCACAGATaGGTATGTCATTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAGCWHR*VCHYLC
Trigger: GCAAAGGTAATGACATACGCATCTGTGCCAGCATCC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTGAGATGGCACCACTaGATTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGLRWHH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGTGCCATCTCAG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp TCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTTACTCCTAGGTACACACAGTaGCAGGATCATCAAAATGTC +
Preference number: 4 (lower is better)
Translates to: SCFSALLSWMELARLEVTPRYTQ*QDHQNV
Trigger: GACATTTTGATGATCCTGGCACTGTGTGTACCTAGG...AGTAACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGTCACTCTTGGGATGCTaGCACAGATGCGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAESLLGC*HRCVCH
Trigger: ATGACATACGCATCTGTGCCAGCATCCCAAGAGTGA...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCAACCAGCCTCACTCTTaGGATGCTGGCACAGATGCG +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGNQPHS*DAGTDA
Trigger: CGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTT...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACGAAGAGTCATTAACGTaGCTGAAGCTCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNEESLT*LKLSED
Trigger: GTCCTCCGAGAGCTTCAGCCACGTTAATGACTCTTC...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR CCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACACTCAGATATaGGCGGTGGGGTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEKNTQI*AVGLHG
Trigger: TCCATGCAACCCCACCGCCCATATCTGAGTGTTTTT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR TCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCGGCAGGAGAACTGCTTaGACCTGGGAGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCGRRTA*TWEAEV
Trigger: AACCTCAGCCTCCCAGGTTCAAGCAGTTCTCCTGCC...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGGAAAATGCTGGGTTTaGGCCAGGGAAATAGATAGT +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEGKCWV*AREIDS
Trigger: ACTATCTATTTCCCTGGCTCAAACCCAGCATTTTCC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCGCAGCCCGGGCATGCTaGCTCACCAATCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVAARAC*LTNPWC
Trigger: GCACCATGGATTGGTGAGGCAGCATGCCCGGGCTGC...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTATTTCTTGCTTATGGCTaGGCCTGGCCTCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLFLAYG*AWPQKH
Trigger: ATGCTTTTGAGGCCAGGCGCAGCCATAAGCAAGAAA...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGTATGTCATTACCTTTaGCAGAAAGAGCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAVCHYL*QKEPHA
Trigger: TGCATGGGGCTCTTTCTGGCAAAGGTAATGACATAC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAGGATGCTGGCACAGATaGGTATGTCATTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLGCWHR*VCHYLC
Trigger: GCAAAGGTAATGACATACGCATCTGTGCCAGCATCC...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTTGTTATACAGTACCTTaGTATCCAGCATGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDICYTVP*YPACGS
Trigger: AGACCCACATGCTGGATAGCAAGGTACTGTATAACA...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGCTCAGATATGGGCGGTaGGGTTGCATGGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKELRYGR*GCMEVE
Trigger: TTCAACCTCCATGCAACCCCACCGCCCATATCTGAG...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp TGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACACTAAAAACACTCAGATATaGGCGGTGGGGTTGCATGGA +
Preference number: 4 (lower is better)
Translates to: WTKHIRAEVQSSRAEKNTKNTQI*AVGLHG
Trigger: TCCATGCAACCCCACCGCCCATATCTGAGTGTTTTT...AGTGTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR CCA 90 bp GAGCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTGCATGGAGGTTGAAGAGGTAAGAATACCTGCATaGGAAAGATTCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EPRKTLRYGRWGCMEVEEVRIPA*ERFWRK
Trigger: CTTTCTCCAGAATCTTTCCCATGCAGGTATTCTTAC...CTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587490.5
CDS-3UTR CCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGCAAGAGTTCTTAACTTaGCAGAAAACAGGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEQEFLT*QKTGGL
Trigger: CAAGCCCCCTGTTTTCTGCCAAGTTAAGAACTCTTG...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGCTTAACAAGCACTaGTATAGCAGTCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAELNKH*YSSHPR
Trigger: CCTTGGATGACTGCTATACCAGTGCTTGTTAAGCTC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLALNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGGGGTTGCATGGAGGTTaGAGAGTCATTAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTGLHGG*RVINVA
Trigger: AGCCACGTTAATGACTCTTCAACCTCCATGCAACCC...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTGCTTCCTCTTCTCTaGTCCCACAGTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGLLPLL*SHSHLS
Trigger: AGACAGATGACTGTGGGATCAGAGAAGAGGAAGCAG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACCAAAAGGGCTGGTTGTaGGAATCATGTACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNQKGWL*ESCTLR
Trigger: TCTGAGAGTACATGATTCTCACAACCAGCCCTTTTG...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAGTGGCAGCCCGGGCATaGTGCCTCACCAATCCATGG +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGVAARA*CLTNPW
Trigger: CCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCAC...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAGAGATGGAATCTTTTTaGTCTGTTGCCCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLEMESF*SVAQVG
Trigger: TCCAACCTGGGCAACAGAGCAAAAAGATTCCATCTC...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGGGTACAATGGATATTaGTGGAATGTCTTACAGAGC +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEGYNGY*WNVLQS
Trigger: GCTCTGTAAGACATTCCAGCAATATCCATTGTACCC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATGTCTTCCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSMSSQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGAAGACAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTATGTCTTCCCAACAGTaGCAGCCCGGGCATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIMSSQQ*QPGHAA
Trigger: GGCAGCATGCCCGGGCTGCCACTGTTGGGAAGACAT...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCTGGATGGCACGATCTTaGCTCACCGCAACCTCTACC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCWMARS*LTATST
Trigger: GGTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCA...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTGTCACCCAGGCTGGATaGCACGATCTTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIVTQAG*HDLGSP
Trigger: CGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGAC...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAAACCAGCCTCACTCTTaGGATGCTGGCACAGATGCG +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLANQPHS*DAGTDA
Trigger: CGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTT...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTTCCCGTCCAGCAAGGTaGCAGGATCCAAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEISRPAR*QDPKVC
Trigger: GCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGA...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGAGGGTTAATCAGCAGTaGTTAAGATGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKERVNQQ*LRWAQL
Trigger: GAGCTGGGCCCATCTTAACCACTGCTGATTAACCCT...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTAGAGGATTACACCACTaGAAAGAGAACCAAGTTATG +
Preference number: 4 (lower is better)
Translates to: RGIPKSGPSISPQGTMDIRGLHH*KENQVM
Trigger: CATAACTTGGTTCTCTTTCCAGTGGTGTAATCCTCT...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CAA 72 bp GCATTTCAACAAGATGCCCCGGTGATTCCAAACACCTaGGAGCTTAACAAGCACTGGTATAGCAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: AFQQDAPVIPNT*ELNKHWYSSHP
Trigger: TGGATGACTGCTATACCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCACCGGGGCATCTTGTTGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
3UTR CAA 72 bp AGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTTACTaGGAGCTTGTTAGATGTGCAGAATCTAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: SMWVFKWQFWPY*ELVRCAESKAP
Trigger: CGGTGCCTTAGATTCTGCACATCTAACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAAGACCCACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQLNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGGCAGGAGAACTGCTTaGACCTGGGAGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYGRRTA*TWEAEV
Trigger: AACCTCAGCCTCCCAGGTTCAAGCAGTTCTCCTGCC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAACCATCTCGAACTTCTaGCCTCATGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLATISNF*PHDPPA
Trigger: GGCAGGTGGATCATGAGGTCAGAAGTTCGAGATGGT...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTACACCAAGGTAACCAATaGATGTTAACACCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLHQGNQ*MLTPSC
Trigger: ACACGAAGGTGTTAACATTCATTGGTTACCTTGGTG...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACAGAACTCGCATTTATTaGTTCCCACACACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNRTRIY*FPHTPN
Trigger: ATTGGGAGTGTGTGGGAATCAATAAATGCGAGTTCT...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCGAGCCCCATGCACCCTaGAAATCAAGACATTTCACA +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGEPHAP*KSRHFT
Trigger: TGTGAAATGTCTTGATTTTCAGGGTGCATGGGGCTC...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCGACTTCATGGAAGATaGACACTGAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGRLHGR*TLRNCS
Trigger: GGAGCAGTTTCTCAGTGTTCATCTTCCATGAAGTCG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TGCCAGGATCATCAAAATGTCATTAGGCAGTATAAACTTTTCAGCTCCATAAAAAGGTGCTTCAGACCGTaGGGTGGGCACTCGGGATTG +
Preference number: 4 (lower is better)
Translates to: CQDHQNVIRQYKLFSSIKRCFRP*GGHSGL
Trigger: CAATCCCGAGTGCCCACCTCACGGTCTGAAGCACCT...TTTTATGGAGCTGAAAAGTTTATACTGCCTAATGACATTTTGATGATCCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR TCA 90 bp TGCCAGGATCATCAAAATGTCATTAGGCAGTATAAACTTTTCAGCTCCATAAAAACCTCAGTGCCTCCTTaGGCCGACCTCGTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CQDHQNVIRQYKLFSSIKTSVPP*ADLVFG
Trigger: CCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGT...TTTTATGGAGCTGAAAAGTTTATACTGCCTAATGACATTTTGATGATCCTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATTGCCCAGGTTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQLPRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAACCTGGGCAA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAGCCTCACTCTTGGGATaGTGGCACAGATGCGTATGT +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLAASLLG*WHRCVC
Trigger: ACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGC...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTCAGGATCCAAAGGTCTaGAGGGCACCCAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIQDPKV*RAPREL
Trigger: GAGTTCTCTGGGTGCCCTGCAGACCTTTGGATCCTG...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATGGATGGCACGATCTTaGCTCACCGCAACCTCTACC +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVWMARS*LTATST
Trigger: GGTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCTTGTCACCCAGGCTaGATGGCACGATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSCHPG*MARSWL
Trigger: GAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCCCGTCCAGCAAGGTaGCAGGATCCAAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSRPAR*QDPKVC
Trigger: GCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTCCCGTCCAGCAAGGTaGCAGGATCCAAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYSRPAR*QDPKVC
Trigger: GCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTGTGGCTCTAAGGGCTaGCAGGAGCTAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYCGSKG*QELESP
Trigger: AGGGCTCTCTAGCTCCTGCCAGCCCTTAGAGCCACA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCTGTGGCTCTAAGGGCTaGCAGGAGCTAGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVCGSKG*QELESP
Trigger: AGGGCTCTCTAGCTCCTGCCAGCCCTTAGAGCCACA...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGTAAGAATACCTGCATaGGAAAGATTCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAVRIPA*ERFWRK
Trigger: CTTTCTCCAGAATCTTTCCCATGCAGGTATTCTTAC...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTGAACCTGGGAGGCTaGGGTTACAGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLNLGG*GYSEPR
Trigger: TCTCGGCTCACTGTAACCTCAGCCTCCCAGGTTCAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTATCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLSVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAACCATCTCGAACTTCTaGCCTCATGATCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVTISNF*PHDPPA
Trigger: GGCAGGTGGATCATGAGGTCAGAAGTTCGAGATGGT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATGGTCTCCGTCACAATaGCTCAACTCTCCCGCCATA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVWSPSQ*LNSPAI
Trigger: TATGGCGGGAGAGTTGAGTCATTGTGACGGAGACCA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGATCTGTCTATGGGAGTaGTTTAAATTTGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEICLWE*FKFECR
Trigger: TCTGCACTCAAATTTAAATCACTCCCATAGACAGAT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAGACATTCAGTCATaGGATAATCTGGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEKDIQS*DNLGLI
Trigger: AATGAGACCCAGATTATCTCATGACTGAATGTCTTT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp TCTGCTATAATCTTATGGGACCACTACTGTATATGTGGTCCCTCATTGACCAAACTCACCAATCCATGGTaGTTCTTCCTGCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SAIILWDHYCICGPSLTKLTNPW*FFLLQS
Trigger: AGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG...TTTGGTCAATGAGGGACCACATATACAGTAGTGGTCCCATAAGATTATAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR GCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCCTCAGACAATTTGCCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGLRQFA*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGCAAATTGTCTGAG...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCGACCTCAGACAATTTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSRPQTI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGGCAAATTGTCTGAGGTCG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTGCCCAGGTTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLPRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAACCTGGGCAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTTGCCCAGGTTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLPRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAACCTGGGCAA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCAGGATCCAAAGGTCTaGAGGGCACCCAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSQDPKV*RAPREL
Trigger: GAGTTCTCTGGGTGCCCTGCAGACCTTTGGATCCTG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTCAGGATCCAAAGGTCTaGAGGGCACCCAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIQDPKV*RAPREL
Trigger: GAGTTCTCTGGGTGCCCTGCAGACCTTTGGATCCTG...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTTATGGGCGGTGGGGTTaGATGGAGGTTGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIYGRWG*MEVEES
Trigger: TGACTCTTCAACCTCCATGCAACCCCACCGCCCATA...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGATTTGTAAGAATACCTaGATGGGAAAGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEICKNT*MGKILE
Trigger: CTCCAGAATCTTTCCCATGCAGGTATTCTTACAAAT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTGGATGGCACGATCTTaGCTCACCGCAACCTCTACC +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYWMARS*LTATST
Trigger: GGTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTCTTGTCACCCAGGCTaGATGGCACGATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLISCHPG*MARSWL
Trigger: GAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTCTTGTCACCCAGGCTaGATGGCACGATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYSCHPG*MARSWL
Trigger: GAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGGGGTTTCACCATGCTaGCCAGGCTGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYGVSPC*PGCSRT
Trigger: AGTTCGAGAACAGCCTGGCCAGCATGGTGAAACCCC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATAACCAGCCTCACTCTTaGGATGCTGGCACAGATGCG +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYNQPHS*DAGTDA
Trigger: CGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGVTESE*ISRNQP
Trigger: AGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGAC...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGATCCCGTCCAGCAAGGTaGCAGGATCCAAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGSRPAR*QDPKVC
Trigger: GCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGA...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TGCCAGGATCATCAAAATGTCATTAGGCAGTATAAACTTTTCAGCTCCATAAAACGGATACCCTCGGGGTaGGTGTCAGCAGAACATTCC +
Preference number: 4 (lower is better)
Translates to: CQDHQNVIRQYKLFSSIKRIPSG*VSAEHS
Trigger: GGAATGTTCTGCTGACACCCACCCCGAGGGTATCCG...TTTTATGGAGCTGAAAAGTTTATACTGCCTAATGACATTTTGATGATCCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586187.2
3UTR CAA 72 bp ACGTGGGGTTTTTCTGTAGGTGGAACCCTCTTCCGTTaGTACAAGAGAGAATCACTTACTGCTGGTTTATAC +
Preference number: 4 (lower is better)
Translates to: TWGFSVGGTLFR*YKRESLTAGLY
Trigger: GTATAAACCAGCAGTAAGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCCACCTACAGAAAAACCCCACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR TCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTATTGTGGTATCACCCGTaGTTCAGTCATTTATGTATT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLLWYHP*FSHLCI
Trigger: AATACATAAATGACTGAATCACGGGTGATACCACAA...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCACGACTTCATGGAAGATaGACACTGAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLARLHGR*TLRNCS
Trigger: GGAGCAGTTTCTCAGTGTTCATCTTCCATGAAGTCG...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTGGGCAATGTTTTCTTaGTTATGGCTGCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSWAMFS*LWLRLA
Trigger: GGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCTGGGCAATGTTTTCTTaGTTATGGCTGCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGWAMFS*LWLRLA
Trigger: GGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCA...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATACAAGCAATTCTCCTaGCTCATGCCTCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVYKQFS*LMPQPP
Trigger: GGGAGGTTGAGGCATGAGGCAGGAGAATTGCTTGTA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGACGACCTCAGACAATTTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGRPQTI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGGCAAATTGTCTGAGGTCG...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTACTCCCTCCAAGTCAATaGATACTCTTCTATACTTTT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLLPPSQ*ILFYTF
Trigger: AAAAGTATAGAAGAGTATGCATTGACTTGGAGGGAG...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCGGATGCTGGCACAGATaGGTATGTCATTACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCGCWHR*VCHYLC
Trigger: GCAAAGGTAATGACATACGCATCTGTGCCAGCATCC...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS-3UTR GCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGCCTCACTCTTGGGATaGTGGCACAGATGCGTATGT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYASLLG*WHRCVC
Trigger: ACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACATTTGTAAGAATACCTaGATGGGAAAGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNICKNT*MGKILE
Trigger: CTCCAGAATCTTTCCCATGCAGGTATTCTTACAAAT...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR GCA 90 bp AATCTTATGGGACCACTACTGTATATGTGGTCCCTCATTGACCAAAACATCATTGTGATCTTAACTCACTaGAACCTCCGCTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: NLMGPLLYMWSLIDQNIIVILTH*NLRFPG
Trigger: ACCTGGGAAGCGGAGGTTGCAGTGAGTTAAGATCAC...AATGATGTTTTGGTCAATGAGGGACCACATATACAGTAGTGGTCCCATAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAAATGACACAGGTATCTaGTATTCGATCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLNDTGI*YSIIFC
Trigger: GCAGAAAATGATCGAATACCAGATACCTGTGTCATT...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCACACTCACTACAGACGTaGGGTTTTTCTGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLAHSLQT*GFSVGG
Trigger: TCCACCTACAGAAAAACCCCACGTCTGTAGTGAGTG...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGCAACCTCTACCTCCTaGGTACAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVATSTS*VQAILL
Trigger: CAGGAGAATTGCTTGTACCCAGGAGGTAGAGGTTGC...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCATGTACTCTCAGAATaGGTGAGTTCTTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGHVLSE*VSSLRG
Trigger: TCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGTTGCTATCCAGCATGTaGGTCTTCAAGTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKELLSSM*VFKWQF
Trigger: AAATTGCCACTTGAAGACCCACATGCTGGATAGCAA...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCAACCACATCTTTGAATaGCACAGGTATCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGNHIFE*HRYLVF
Trigger: GAATACCAGATACCTGTGTCATTCAAAGATGTGGTT...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTGGTCTCCGTCACAATaGCTCAACTCTCCCGCCATA +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAWSPSQ*LNSPAI
Trigger: TATGGCGGGAGAGTTGAGTCATTGTGACGGAGACCA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTACGACTTCATGGAAGATaGACACTGAGAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVRLHGR*TLRNCS
Trigger: GGAGCAGTTTCTCAGTGTTCATCTTCCATGAAGTCG...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCCTCACCAATCCATGGTaGTTCTTCCTGCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGLTNPW*FFLLQS
Trigger: AGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATCTCACCAATCCATGGTaGTTCTTCCTGCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYLTNPW*FFLLQS
Trigger: AGACTGGAGCAGGAAGAAGCACCATGGATTGGTGAG...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATTTCTTGCTTATGGCTaGGCCTGGCCTCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVFLAYG*AWPQKH
Trigger: ATGCTTTTGAGGCCAGGCGCAGCCATAAGCAAGAAA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTGGGCAATGTTTTCTTaGTTATGGCTGCGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAWAMFS*LWLRLA
Trigger: GGCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTAATTCTCCTGCCTCATaGCTCAACCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSNSPAS*LNLPSS
Trigger: GCTACTTGGGAGGTTGAGGCATGAGGCAGGAGAATT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCAATTCTCCTGCCTCATaGCTCAACCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVNSPAS*LNLPSS
Trigger: GCTACTTGGGAGGTTGAGGCATGAGGCAGGAGAATT...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTACAAGCAATTCTCCTaGCTCATGCCTCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSYKQFS*LMPQPP
Trigger: GGGAGGTTGAGGCATGAGGCAGGAGAATTGCTTGTA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTACAAGCAATTCTCCTaGCTCATGCCTCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSYKQFS*LMPQPP
Trigger: GGGAGGTTGAGGCATGAGGCAGGAGAATTGCTTGTA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAATCTTTTTGCTCTGTTaGCCAGGTTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLAIFLLC*PGWSAM
Trigger: CATTGCACTCCAACCTGGGCAACAGAGCAAAAAGAT...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTATTTGATTCTAGTGTTTaGTTTGGTTTTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLFDSSV*FGFGGF
Trigger: AAAACCCCCAAAACCAAAGCAAACACTAGAATCAAA...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTACAAAATTCCAAAGGTaGCAGCCTCCTTCAGTACCC +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEITKFQR*QPPSVP
Trigger: GGGTACTGAAGGAGGCTGGCACCTTTGGAATTTTGT...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTGCTTATGGCTGCGCCTaGCCTCAAAAGCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAAYGCA*PQKHVL
Trigger: CAAGACATGCTTTTGAGGCCAGGCGCAGCCATAAGC...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLAMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGCAACCTCTACCTCCTaGGTACAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGATSTS*VQAILL
Trigger: CAGGAGAATTGCTTGTACCCAGGAGGTAGAGGTTGC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCACTCTTGGGATGCTaGCACAGATGCGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSLLGC*HRCVCH
Trigger: ATGACATACGCATCTGTGCCAGCATCCCAAGAGTGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTGTAAATCCAGCACTTTaGGAAGCCAAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIVNPAL*EAKAGG
Trigger: TCCACCTGCTTTGGCTTCCCAAAGTGCTGGATTTAC...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGTTCAAGTGGCAATTTTaGCCTTACTTGGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTFKWQF*PYLELV
Trigger: AACAAGCTCCAAGTAAGGCCAAAATTGCCACTTGAA...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCATGTTCTGTGCGGTGTaGCTTCTGGGTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVMFCAV*LLGKGF
Trigger: AAAGCCTTTACCCAGAAGTCACACCGCACAGAACAT...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATGTTCTGTGCGGTGTaGCTTCTGGGTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYMFCAV*LLGKGF
Trigger: AAAGCCTTTACCCAGAAGTCACACCGCACAGAACAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAATGGAGAACAGCTCTTaGTTTTGGTACCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQMENSS*FWYPVF
Trigger: GAAGACAGGGTACCAAAATCAAGAGCTGTTCTCCAT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAATCTGCATCCCCCAGTaGCTACTGAGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVICIPQ*LLRINI
Trigger: AATGTTTATCCTCAGTAGTCACTGGGGGATGCAGAT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGTCTTCTTTGAGATCATaGCAGTTATTAGACCTGATG +
Preference number: 4 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTSSLRS*QLLDLM
Trigger: CATCAGGTCTAATAACTGTCATGATCTCAAAGAAGA...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCTTTCTTGCTTATGGCTaGGCCTGGCCTCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVFLAYG*AWPQKH
Trigger: ATGCTTTTGAGGCCAGGCGCAGCCATAAGCAAGAAA...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAAATTCTCCTGCCTCATaGCTCAACCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGNSPAS*LNLPSS
Trigger: GCTACTTGGGAGGTTGAGGCATGAGGCAGGAGAATT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAATCTTTTTGCTCTGTTaGCCAGGTTGGAGTGCAATG +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVIFLLC*PGWSAM
Trigger: CATTGCACTCCAACCTGGGCAACAGAGCAAAAAGAT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCATTAGATCACTTAGCTaGAGGGCCTTCTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCIRSLS*RAFCRC
Trigger: ACATCTACAGAAGGCCCTGCAGCTAAGTGATCTAAT...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGTATGTCATTACCTTTaGCAGAAAGAGCTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVVCHYL*QKELPQ
Trigger: TTGCGGGAGCTCTTTCTGGCAAAGGTAATGACATAC...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGGGTTTTTCTGTAGGTaGAACCCTCTTCCGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVGFFCR*NPLPFV
Trigger: TACAAACGGAAGAGGGTTCCACCTACAGAAAAACCC...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCACTCACTACAGACGTaGGGTTTTTCTGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSHSLQT*GFSVGG
Trigger: TCCACCTACAGAAAAACCCCACGTCTGTAGTGAGTG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATTGTATGGCTCACTGTaGAATATACCAGAGTATGCC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLALYGSL*NIPEYA
Trigger: GGCATACTCTGGTATATTCCACAGTGAGCCATACAA...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCCTCAAGAGAACATTGTaGAATTCCACTCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCLKRTL*NSTQVH
Trigger: GTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAG...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCACTCAAGAGAACATTGTaGAATTCCACTCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLALKRTL*NSTQVH
Trigger: GTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAG...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCACTCTTGGGATGCTaGCACAGATGCGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSLLGC*HRCVCH
Trigger: ATGACATACGCATCTGTGCCAGCATCCCAAGAGTGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTGCATGGGAAAGATTCTaGAGAAAGAGAGATGGACCA +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIAWERF*RKRDGP
Trigger: TGGTCCATCTCTCTTTCTCCAGAATCTTTCCCATGC...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLASVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAACACCAAGGTAACCAATaGATGTTAACACCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQHQGNQ*MLTPSC
Trigger: ACACGAAGGTGTTAACATTCATTGGTTACCTTGGTG...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTACTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVLKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTGGTTTATACATAAGTaGCGGGTTCTGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSWFIHK*RVLGES
Trigger: GCTTTCACCCAGAACCCGGCACTTATGTATAAACCA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCTGGTTTATACATAAGTaGCGGGTTCTGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGWFIHK*RVLGES
Trigger: GCTTTCACCCAGAACCCGGCACTTATGTATAAACCA...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTATTAGATCACTTAGCTaGAGGGCCTTCTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIIRSLS*RAFCRC
Trigger: ACATCTACAGAAGGCCCTGCAGCTAAGTGATCTAAT...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCGTATGTCATTACCTTTaGCAGAAAGAGCCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVVCHYL*QKEPRY
Trigger: ATACCGCGGCTCTTTCTGGCAAAGGTAATGACATAC...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS-3UTR CCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCTGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVCRLFL*ILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCA...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYCRLFL*ILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAATGTCTGCTGAGGTTTaGCTTCTGGTAGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVMSAEV*LLVESF
Trigger: AAAGCTTTCTACCAGAAGCCAAACCTCAGCAGACAT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTAAAGTAAAGGCTTTGTaGGCCATATGGTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSKVKAL*AIWSPS
Trigger: TGACGGAGACCATATGGCCCACAAAGCCTTTACTTT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGATCACTCTTGGGATGCTaGCACAGATGCGTATGTCAT +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGSLLGC*HRCVCH
Trigger: ATGACATACGCATCTGTGCCAGCATCCCAAGAGTGA...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIVTESE*ISRNQP
Trigger: AGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGAC...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGVTESE*ISRNQP
Trigger: AGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGAC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS-3UTR CCA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGAAAATGTCGACTTCATaGAAGATGAACACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTKMSTS*KMNTEK
Trigger: TTTCTCAGTGTTCATCTTCCATGAAGTCGACATTTT...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp TGTTATACAGTACCTTGCTATCCAGCATGTGGGTCTTCAAGTGGCAATTTTGGCCTGAAGCATTTTATCTaGAAAGTTTGTCACAACAGA +
Preference number: 4 (lower is better)
Translates to: CYTVPCYPACGSSSGNFGLKHFI*KVCHNR
Trigger: TCTGTTGTGACAAACTTTCCAGATAAAATGCTTCAG...GCCAAAATTGCCACTTGAAGACCCACATGCTGGATAGCAAGGTACTGTATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR TCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAATCTGCATCCCCCAGTaGCTACTGAGGATAAACATT +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGICIPQ*LLRINI
Trigger: AATGTTTATCCTCAGTAGTCACTGGGGGATGCAGAT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCACCAAGGTAACCAATaGATGTTAACACCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSHQGNQ*MLTPSC
Trigger: ACACGAAGGTGTTAACATTCATTGGTTACCTTGGTG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGGGAAGAGTGTTCTATaGGTAAAGAGGATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSGKSVL*VKRILN
Trigger: GTTCAGAATCCTCTTTACTCATAGAACACTCTTCCC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVLKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTCTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLILKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCGAGAGAATCACTTACTaGTGGTTTATACATAAGTGC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCERITY*WFIHKC
Trigger: GCACTTATGTATAAACCAGCAGTAAGTGATTCTCTC...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATTAGATCACTTAGCTaGAGGGCCTTCTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSIRSLS*RAFCRC
Trigger: ACATCTACAGAAGGCCCTGCAGCTAAGTGATCTAAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGATGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGCRLFL*ILTRQM
Trigger: CATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCA...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTATGTTTTCTTGCTTATaGCTGCGCCTGGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAMFSCL*LRLASK
Trigger: TTTTGAGGCCAGGCGCAGCCATAAGCAAGAAAACAT...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAAGAATCACTTACTGCTaGTTTATACATAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVRITYC*FIHKCR
Trigger: CCGGCACTTATGTATAAACCAGCAGTAAGTGATTCT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAGGGTTTTTCTGTAGGTaGAACCCTCTTCCGTTTGTA +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGGFFCR*NPLPFV
Trigger: TACAAACGGAAGAGGGTTCCACCTACAGAAAAACCC...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTTGTATGGCTCACTGTaGAATATACCAGAGTATGCC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLYGSL*NIPEYA
Trigger: GGCATACTCTGGTATATTCCACAGTGAGCCATACAA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCTTGTATGGCTCACTGTaGAATATACCAGAGTATGCC +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGLYGSL*NIPEYA
Trigger: GGCATACTCTGGTATATTCCACAGTGAGCCATACAA...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCAATAATGCTGATTGTATaGCTCACTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: LAFFTQENIVEFHSSPLAIMLIV*LTVEYT
Trigger: GGTATATTCCACAGTGAGCCATACAATCAGCATTAT...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCATAATGCTGATTGTATaGCTCACTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCIMLIV*LTVEYT
Trigger: GGTATATTCCACAGTGAGCCATACAATCAGCATTAT...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCTCCTTTCTCATTCTaGATCAGGCAGTCTTACATG +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSPFSF*IRQSYM
Trigger: CATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTGAGGATAAACATTTTTaGACAGGTCCATTGGCCACT +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIEDKHF*TGPLAT
Trigger: AGTGGCCAATGGACCTGTCCAAAAATGTTTATCCTC...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCGAGGATAAACATTTTTaGACAGGTCCATTGGCCACT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVEDKHF*TGPLAT
Trigger: AGTGGCCAATGGACCTGTCCAAAAATGTTTATCCTC...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCTCAAGAGAACATTGTaGAATTCCACTCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLKRTL*NSTQVH
Trigger: GTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTCGCCAGATGTCTTCTaGAGAAAGTACAGTGAATCA +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYSPDVF*RKYSES
Trigger: TGATTCACTGTACTTTCTCCAGAAGACATCTGGCGA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAATTTTCTGCTGTTCTTaGAAAAGATCTGACACCTGT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVIFCCS*KRSDTC
Trigger: ACAGGTGTCAGATCTTTTTCAAGAACAGCAGAAAAT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000542455.2
CDS-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTAACCACATCTTTGAATaGCACAGGTATCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSNHIFE*HRYLVF
Trigger: GAATACCAGATACCTGTGTCATTCAAAGATGTGGTT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCTCCCGCCATACCATaGAAATATAGACAACATGTA +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSPAIP*KYRQHV
Trigger: TACATGTTGTCTATATTTTCATGGTATGGCGGGAGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR TCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTACTGGAGAAAGTACAGTaGATCATCCTTATGAAACTT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVLEKVQ*IILMKL
Trigger: AAGTTTCATAAGGATGATTCACTGTACTTTCTCCAG...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR GCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGACTCAAAAGCATGTCTTaGCGTCTTTTCCTCTGGATA +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGLKSMS*RLFLWI
Trigger: TATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAG...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR GCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCATGCCAGGGTGTCCATaGTTATGTTTGAGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVMPGCP*LCLRKY
Trigger: ATACTTTCTCAAACATAAGCATGGACACCCTGGCAT...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTGTCCATTTCATGAATaGCTTCTCTCTGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSCPFHE*LLSDQL
Trigger: AAGCTGATCAGAGAGAAGGCATTCATGAAATGGACA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTGTCCATTTCATGAATaGCTTCTCTCTGATCAGCTT +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLICPFHE*LLSDQL
Trigger: AAGCTGATCAGAGAGAAGGCATTCATGAAATGGACA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAATTAGATCACTTAGCTaGAGGGCCTTCTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGIRSLS*RAFCRC
Trigger: ACATCTACAGAAGGCCCTGCAGCTAAGTGATCTAAT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTAATGACACAGGTATCTaGTATTCGATCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEINDTGI*YSIIFC
Trigger: GCAGAAAATGATCGAATACCAGATACCTGTGTCATT...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCAGAATCACTTACTGCTaGTTTATACATAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSRITYC*FIHKCR
Trigger: CCGGCACTTATGTATAAACCAGCAGTAAGTGATTCT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTAGAATCACTTACTGCTaGTTTATACATAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIRITYC*FIHKCR
Trigger: CCGGCACTTATGTATAAACCAGCAGTAAGTGATTCT...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCAGGCAGTCTTACATaGAGGGAAATCTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSGSLT*REILKN
Trigger: ATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGATCTCCTTTCTCATTCTaGATCAGGCAGTCTTACATG +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGSPFSF*IRQSYM
Trigger: CATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGA...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTCTCCTTTCTCATTCTaGATCAGGCAGTCTTACATG +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLASPFSF*IRQSYM
Trigger: CATGTAAGACTGCCTGATCCAGAATGAGAAAGGAGA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCAAAAACCGCTTTAAGTaGTTCCCATCTATTACAATG +
Preference number: 4 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCKNRFK*FPSITM
Trigger: CATTGTAATAGATGGGAACCACTTAAAGCGGTTTTT...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTCGCCAGATGTCTTCTaGAGAAAGTACAGTGAATCA +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLASPDVF*RKYSES
Trigger: TGATTCACTGTACTTTCTCCAGAAGACATCTGGCGA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATTTTCTGCTGTTCTTaGAAAAGATCTGACACCTGT +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSIFCCS*KRSDTC
Trigger: ACAGGTGTCAGATCTTTTTCAAGAACAGCAGAAAAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000542455.2
CDS-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATGTACATTGAGGTATaGCTTCTCACCAAACGATTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYMYIEV*LLTKRF
Trigger: AAATCGTTTGGTGAGAAGTCATACCTCAATGTACAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATGTACATTGAGGTATaGCTTCTCACCAAACGATTT +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSMYIEV*LLTKRF
Trigger: AAATCGTTTGGTGAGAAGTCATACCTCAATGTACAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTTTTTCGATGTACATTaGGGTATGACTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIFFDVH*GMTSHQ
Trigger: TTGGTGAGAAGTCATACCTCAATGTACATCGAAAAA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTTTTTCGATGTACATTaGGGTATGACTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYFFDVH*GMTSHQ
Trigger: TTGGTGAGAAGTCATACCTCAATGTACATCGAAAAA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR TCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTATTCCCTACATACCATaGAACCAGATATTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIIPYIP*NQIFCS
Trigger: TGAGCAAAATATCTGGTTTCATGGTATGTAGGGAAT...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR TCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTTCAGTGGTCTACGCATaGAACATTTCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLASVVYA*NISELY
Trigger: GTATAACTCAGAAATGTTTCATGCGTAGACCACTGA...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR TCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTTGTGGTATCACCCGTaGTTCAGTCATTTATGTATT +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLILWYHP*FSHLCI
Trigger: AATACATAAATGACTGAATCACGGGTGATACCACAA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR TCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTTGTGGTATCACCCGTaGTTCAGTCATTTATGTATT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLWYHP*FSHLCI
Trigger: AATACATAAATGACTGAATCACGGGTGATACCACAA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGAGAGAATCACTTACTaGTGGTTTATACATAAGTGC +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGERITY*WFIHKC
Trigger: GCACTTATGTATAAACCAGCAGTAAGTGATTCTCTC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGAGAGAATCACTTACTaGTGGTTTATACATAAGTGC +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYERITY*WFIHKC
Trigger: GCACTTATGTATAAACCAGCAGTAAGTGATTCTCTC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGAGAGAATCACTTACTaGTGGTTTATACATAAGTGC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSERITY*WFIHKC
Trigger: GCACTTATGTATAAACCAGCAGTAAGTGATTCTCTC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCAACTCATATTCTTTaGCACATTTTGCTATTGGGT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSTHIL*HILLLG
Trigger: ACCCAATAGCAAAATGTGGCAAAGAATATGAGTTGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATTTGATTCTAGTGTTTaGTTTGGTTTTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVFDSSV*FGFGGF
Trigger: AAAACCCCCAAAACCAAAGCAAACACTAGAATCAAA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCAATGACACAGGTATCTaGTATTCGATCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVNDTGI*YSIIFC
Trigger: GCAGAAAATGATCGAATACCAGATACCTGTGTCATT...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCAATGACACAGGTATCTaGTATTCGATCATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSNDTGI*YSIIFC
Trigger: GCAGAAAATGATCGAATACCAGATACCTGTGTCATT...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTAGAATCACTTACTGCTaGTTTATACATAAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLARITYC*FIHKCR
Trigger: CCGGCACTTATGTATAAACCAGCAGTAAGTGATTCT...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATAATGCTGATTGTATaGCTCACTGTGGAATATACC +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSIMLIV*LTVEYT
Trigger: GGTATATTCCACAGTGAGCCATACAATCAGCATTAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSEILLQ*STHETF
Trigger: AAATGTTTCATGCGTAGACCACTGAAGGAGAATTTC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYEILLQ*STHETF
Trigger: AAATGTTTCATGCGTAGACCACTGAAGGAGAATTTC...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTT +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGEILLQ*STHETF
Trigger: AAATGTTTCATGCGTAGACCACTGAAGGAGAATTTC...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTCAGGCAGTCTTACATaGAGGGAAATCTTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSSGSLT*REILKN
Trigger: ATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAGTTTTCTTGTCAGTATaGAGAACAGCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQVFLSV*RTALDF
Trigger: AAAATCAAGAGCTGTTCTCCATACTGACAAGAAAAC...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAACTTCATGTTATCTTCTaGTATCTAGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQLHVIF*YLAWHF
Trigger: AAAATGCCATGCTAGATACCAGAAGATAACATGAAG...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTACTCTTTTCCCCTGTaGTTTCAGATTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYYSFPL*FQISPF
Trigger: AAAAGGTGAAATCTGAAACCACAGGGGAAAAGAGTA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCTACTCTTTTCCCCTGTaGTTTCAGATTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SALQIFPHNLLSLEFADGYSFPL*FQISPF
Trigger: AAAAGGTGAAATCTGAAACCACAGGGGAAAAGAGTA...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAAAAATGTCGACTTCATaGAAGATGAACACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSHSGSGSLTWREILKNVKMSTS*KMNTEK
Trigger: TTTCTCAGTGTTCATCTTCCATGAAGTCGACATTTT...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCAACTCATATTCTTTaGCACATTTTGCTATTGGGT +
Preference number: 4 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSTHIL*HILLLG
Trigger: ACCCAATAGCAAAATGTGGCAAAGAATATGAGTTGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR GCA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTTTGATTCTAGTGTTTaGTTTGGTTTTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIFDSSV*FGFGGF
Trigger: AAAACCCCCAAAACCAAAGCAAACACTAGAATCAAA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CCA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTGAAATTCTCCTTCAGTaGTCTACGCATGAAACATTT +
Preference number: 4 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAEILLQ*STHETF
Trigger: AAATGTTTCATGCGTAGACCACTGAAGGAGAATTTC...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CCA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGTTTTCTTGTCAGTATaGAGAACAGCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSVFLSV*RTALDF
Trigger: AAAATCAAGAGCTGTTCTCCATACTGACAAGAAAAC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATCTTCATGTTATCTTCTaGTATCTAGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYLHVIF*YLAWHF
Trigger: AAAATGCCATGCTAGATACCAGAAGATAACATGAAG...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CCA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCAAAATGTCGACTTCATaGAAGATGAACACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVKMSTS*KMNTEK
Trigger: TTTCTCAGTGTTCATCTTCCATGAAGTCGACATTTT...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
3UTR CAA 72 bp ATGTCCATGTTCACATGTTCATCTGTCTTTTATGTATaGGAGCTTTTACTTCTAAGGGAAGATTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: MSMFTCSSVFYV*ELLLLREDSPK
Trigger: CTTTGGAGAATCTTCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATGGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
3UTR CAA 72 bp GCAACAAAACACAGTGGTATTAGTGGTTCCTGTGACTaGATACTAGTTTGTGAATATTGTTATTTTCATGTC +
Preference number: 4 (lower is better)
Translates to: ATKHSGISGSCD*ILVCEYCYFHV
Trigger: GACATGAAAATAACAATATTCACAAACTAGTATCAAGTCACAGGAACCACTAATACCACTGTGTTTTGTTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CCA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAAAAAACCGCTTTAAGTaGTTCCCATCTATTACAATG +
Preference number: 4 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGKNRFK*FPSITM
Trigger: CATTGTAATAGATGGGAACCACTTAAAGCGGTTTTT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACCCTGACTGTCGTGACCTCAGTGCCTCCTTGAGCCGACCTCGTGTTTGGGTCGACCTCAGTGCCTCCTaGAGCCGACCTCGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: DPDCRDLSASLSRPRVWVDLSAS*SRPRVW
Trigger: CCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTC...GACCCAAACACGAGGTCGGCTCAAGGAGGCACTGAGGTCACGACAGTCAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCCGACCTCAGACAATTaGCCTGCCTCGGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYPTSDN*PASASQ
Trigger: TTGGGAGGCCGAGGCAGGCAAATTGTCTGAGGTCGG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACCTGGATGGCACGATCTaGGCTCACCGCAACCTCTAC +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLDGTI*AHRNLY
Trigger: GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAG...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS CCA 90 bp ACCACGGGCAAGGTCACATCCATCCCCGCTGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGAT +
Preference number: 5 (lower is better)
Translates to: TTGKVTSIPAVTESE*ISRNQPHSWDAGTD
Trigger: ATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGACAGCGGGGATGGATGTGACCTTGCCCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586138.5
ENST00000587143.5
ENST00000587986.5
ENST00000588578.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTGGGGTTTCACCATGTaGACCAGACTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYWGFTM*TRLVLN
Trigger: GTTCAAGACTAGTCTGGTCAACATGGTGAAACCCCA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS TCA 90 bp GCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTGCATGGAGGTTaGAGAGTCATTAACGTGGCTGAAGCTCTCGGAGGACTTTCAAGG +
Preference number: 5 (lower is better)
Translates to: AEKNTQIWAVGLHGG*RVINVAEALGGLSR
Trigger: CCTTGAAAGTCCTCCGAGAGCTTCAGCCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTCACAGCTTTTCTCCTaGGGCAATGTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYSQLFS*GNVFLL
Trigger: AAGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 5 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAACCAGCCTCACTCTaGGGATGCTGGCACAGATGC +
Preference number: 5 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEKPASL*GCWHRC
Trigger: GCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTT...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGGCTGAGATCATGCCATaGCACTCCGGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTAEIMP*HSGLGD
Trigger: GTCGCCCAGGCCGGAGTGCAATGGCATGATCTCAGC...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp GGGCTCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTGATTGCTCTTCTGATTaGATTCTGGACGGATACCCT +
Preference number: 5 (lower is better)
Translates to: GLLLLSTAVVDGACKTGSDCSSD*ILDGYP
Trigger: AGGGTATCCGTCCAGAATCAAATCAGAAGAGCAATC...ACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CAA 90 bp AGAGGCATCCCTAAGAGTGGGCCATCCATCAGCCCTCAGGGTACAATGGATATTTCGGTAGGCCACAGTTaGCTGATCCCTGTTACAGAA +
Preference number: 5 (lower is better)
Translates to: RGIPKSGPSISPQGTMDISVGHS*LIPVTE
Trigger: TTCTGTAACAGGGATCAGCAAACTGTGGCCTACCGA...AATATCCATTGTACCCTGAGGGCTGATGGATGGCCCACTCTTAGGGATGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS GCA 90 bp AATCAAGTAGAGCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTaGATGGAGGTTGAAGAGTCATTAACGTGGCTGAAGCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: NQVEPRKTLRYGRWG*MEVEESLTWLKLSE
Trigger: CTCCGAGAGCTTCAGCCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTCTACTTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS GCA 90 bp ATGGATTTCCAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCTCCCGCAAACCTCT +
Preference number: 5 (lower is better)
Translates to: MDFQKPASLLGCWHR*VCHYLCQKELPQTS
Trigger: AGAGGTTTGCGGGAGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS GCA 90 bp ATGGATTTCCAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCCGCGGTATAAGGTC +
Preference number: 5 (lower is better)
Translates to: MDFQKPASLLGCWHR*VCHYLCQKEPRYKV
Trigger: GACCTTATACCGCGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS CCA 90 bp AGGTGCAATCAAGTAGAGCCGAGAAAAACACTCAGATATGGGCGGTaGGGTTGCATGGAGGTTGAAGAGTCATTAACGTGGCTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RCNQVEPRKTLRYGR*GCMEVEESLTWLKL
Trigger: GAGCTTCAGCCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTCTACTTGATTGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS-3UTR CAA 90 bp TCGCTCTTGTCACCCAGGCTGGATGGCACGATCTTGGCTCACCGCAACCTCTACTTGTCACCCAAAAGATaGTACCAAAAGATTCTACGT +
Preference number: 5 (lower is better)
Translates to: SLLSPRLDGTILAHRNLYLSPKR*YQKILR
Trigger: ACGTAGAATCTTTTGGTACAATCTTTTGGGTGACAA...GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAGCCTGGGTGACAAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCCGTATGTCATTACCTTaGCCAGAAAGAGCCCCATGC +
Preference number: 5 (lower is better)
Translates to: EKERWTKHIRAEVQSSRARMSLP*PERAPC
Trigger: GCATGGGGCTCTTTCTGGCAAAGGTAATGACATACG...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS GCA 90 bp ATGGATTTCCAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCCGTTTCTCAAACCG +
Preference number: 5 (lower is better)
Translates to: MDFQKPASLLGCWHR*VCHYLCQKEPFLKP
Trigger: CGGTTTGAGAAACGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587143.5
CDS-3UTR CAA 90 bp AAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGGTGATTCCAAACACCTaGGAGCTTAACAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: KERWTKHIRAEVQSSRAEVIPNT*ELNKHW
Trigger: CCAGTGCTTGTTAAGCTCCAAGGTGTTTGGAATCAC...CTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp GGGCTCCTGCTTCTCAGCACTGCTGTCGTGGATGGAGCTTGCAAGACTGGAAGTATATGTGGTCCCTCATaGACCAAAACATCATTATGT +
Preference number: 5 (lower is better)
Translates to: GLLLLSTAVVDGACKTGSICGPS*TKTSLC
Trigger: ACATAATGATGTTTTGGTCAATGAGGGACCACATAT...ACTTCCAGTCTTGCAAGCTCCATCCACGACAGCAGTGCTGAGAAGCAGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CAA 90 bp AATCTTATGGGACCACTACTGTATATGTGGTCCCTCATTGACCAAAACATCATTGAGCCGACCTCGTGTTaGGGTCCGGGTGTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: NLMGPLLYMWSLIDQNIIEPTSC*GPGVGG
Trigger: TCCTCCTACACCCGGACCCAAACACGAGGTCGGCTC...AATGATGTTTTGGTCAATGAGGGACCACATATACAGTAGTGGTCCCATAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAACCGACCTCAGACAATTaGCCTGCCTCGGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQPTSDN*PASASQ
Trigger: TTGGGAGGCCGAGGCAGGCAAATTGTCTGAGGTCGG...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CCCATAACCTACCTGCATTACCCACCTCCCTCCAAGTCAATGCATACTCTTCTAAATCTTTTTGCTCTGTaGCCCAGGTTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: PITYLHYPPPSKSMHTLLNLFAL*PRLECN
Trigger: ATTGCACTCCAACCTGGGCAACAGAGCAAAAAGATT...TAGAAGAGTATGCATTGACTTGGAGGGAGGTGGGTAATGCAGGTAGGTTATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGAGTAAATCCAGCACTTaGGGAAGCCAAAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKESKSST*GSQSRW
Trigger: CCACCTGCTTTGGCTTCCCAAAGTGCTGGATTTACT...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp AGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCGAGAAAAACCATTTTGAAAATATTTaGAAGCTGGGCGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RWTKHIRAEVQSSRAEKNHFENI*KLGAVA
Trigger: AGCCACCGCGCCCAGCTTCAAAATATTTTCAAAATG...GTTTTTCTCGGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS TCA 90 bp CCATGCACCCTGAAAATCAAGACATTTCACAGAACTCGCATTTATTaGTTCCCACACACTCCCAATCCATCTTCTTCAGAGACCGTGCCA +
Preference number: 5 (lower is better)
Translates to: PCTLKIKTFHRTRIY*FPHTPNPSSSETVP
Trigger: TGGCACGGTCTCTGAAGAAGATGGATTGGGAGTGTGTGGGAATCAATAAATGCGAGTTCTGTGAAATGTCTTGATTTTCAGGGTGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586138.5
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCGCCGAGATAGTGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSAEIVP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCACTATCTCGGC...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATCTGGATGGCACGATCTaGGCTCACCGCAACCTCTAC +
Preference number: 5 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYLDGTI*AHRNLY
Trigger: GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAG...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCCTGGATGGCACGATCTaGGCTCACCGCAACCTCTAC +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSLDGTI*AHRNLY
Trigger: GTAGAGGTTGCGGTGAGCCAAGATCGTGCCATCCAG...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAAAACCAGCCTCACTCTaGGGATGCTGGCACAGATGC +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQKPASL*GCWHRC
Trigger: GCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GAGAAAGAGAGATGGACCAAGCACATAAGGGCAGAGGTGCAATCAAGTAGAGCCCCTTCAGTACCCCTTTaGCTAGATTTATCACACTTA +
Preference number: 5 (lower is better)
Translates to: EKERWTKHIRAEVQSSRAPSVPL*LDLSHL
Trigger: TAAGTGTGATAAATCTAGCAAAAGGGGTACTGAAGG...GGCTCTACTTGATTGCACCTCTGCCCTTATGTGCTTGGTCCATCTCTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp CATGTACTCTCAGAATGGGTGAGTTCTTTGAGAGGATTACACCACTGGAAAGAGGAATGGGTGAGTTCTTaGAGAGGATTACACCACTGG +
Preference number: 5 (lower is better)
Translates to: HVLSEWVSSLRGLHHWKEEWVSS*RGLHHW
Trigger: CCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTC...CTCTTTCCAGTGGTGTAATCCTCTCAAAGAACTCACCCATTCTGAGAGTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQLGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTGCCGAGATAGTGCCATaGCACTCCAGCCTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAAEIVP*HSSLGN
Trigger: GTTTCCCAGGCTGGAGTGCAATGGCACTATCTCGGC...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CAA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTATACAACACTGTCGGTaGGGCGCGTTGGCTCATGCC +
Preference number: 5 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAIQHCR*GALAHA
Trigger: GGCATGAGCCAACGCGCCCAACCGACAGTGTTGTAT...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CAA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGCAGAACTCGCATTTATaGATTCCCACACACTCCCAA +
Preference number: 5 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTQNSHL*IPTHSQ
Trigger: TTGGGAGTGTGTGGGAATCAATAAATGCGAGTTCTG...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLILGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTTGGGCAATGTTTTCTaGCTTATGGCTGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYLGNVF*LMAAPG
Trigger: GCCAGGCGCAGCCATAAGCAAGAAAACATTGCCCAA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTAAACCAGCCTCACTCTaGGGATGCTGGCACAGATGC +
Preference number: 5 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLAKPASL*GCWHRC
Trigger: GCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTT...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CAA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAAAACCAGCCTCACTCTaGGGATGCTGGCACAGATGC +
Preference number: 5 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGKPASL*GCWHRC
Trigger: GCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGAGGGTACAATGGATATaGCTGGAATGTCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTRVQWI*LECLTE
Trigger: CTCTGTAAGACATTCCAGCAATATCCATTGTACCCT...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATCAGAAAGTAAAGGCTTaGTGGGCCATATGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYQKVKA*WAIWSP
Trigger: CGGAGACCATATGGCCCACAAAGCCTTTACTTTCTG...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTCAGAAAGTAAAGGCTTaGTGGGCCATATGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSQKVKA*WAIWSP
Trigger: CGGAGACCATATGGCCCACAAAGCCTTTACTTTCTG...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CAA 90 bp AGCTGGAAAAACGGGAGGCTGACTAGATACATTCTTGTGGAATTTGCAGTTACGGAGAACTCAGTAAATTaGTTTTCTAACCACGGGCAA +
Preference number: 5 (lower is better)
Translates to: SWKNGRLTRYILVEFAVTENSVN*FSNHGQ
Trigger: TTGCCCGTGGTTAGAAAACAAATTTACTGAGTTCTC...CGTAACTGCAAATTCCACAAGAATGTATCTAGTCAGCCTCCCGTTTTTCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTCGTATGTCATTACCTTaGCCAGAAAGAGCCGCGGTA +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIRMSLP*PERAAV
Trigger: TACCGCGGCTCTTTCTGGCAAAGGTAATGACATACG...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS-3UTR CAA 90 bp CTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATCACAGCTTTTCTCCTaGGGCAATGTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LAFFTQENIVEFHSSPLASQLFS*GNVFLL
Trigger: AAGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGA...TGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGGAACCCTCTTCCGTTaGTACAAGAGAGAATCACTT +
Preference number: 5 (lower is better)
Translates to: LSHSGSGSLTWREILKNVGTLFR*YKRESL
Trigger: AAGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCC...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTGGGGTTTCACCATGTaGACCAGACTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIWGFTM*TRLVLN
Trigger: GTTCAAGACTAGTCTGGTCAACATGGTGAAACCCCA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAAATCTTTTTGCTCTGTaGCCCAGGTTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQNLFAL*PRLECN
Trigger: ATTGCACTCCAACCTGGGCAACAGAGCAAAAAGATT...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TTTCCCAAACTTATTATATTCACAGCTTTTCTCCTTGGGCAATGTTTTCTTGCTCGTATGTCATTACCTTaGCCAGAAAGAGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: FPKLIIFTAFLLGQCFLARMSLP*PERAPA
Trigger: TGCGGGAGCTCTTTCTGGCAAAGGTAATGACATACG...AGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGAATATAATAAGTTTGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCGGAACCCTCTTCCGTTaGTACAAGAGAGAATCACTT +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSGTLFR*YKRESL
Trigger: AAGTGATTCTCTCTTGTACAAACGGAAGAGGGTTCC...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTATCACTCAAGAGAACATaGTGGAATTCCACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: LSHSGSGSLTWREILKNVSLKRT*WNSTQV
Trigger: GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGA...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAATCACTCAAGAGAACATaGTGGAATTCCACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQSLKRT*WNSTQV
Trigger: GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGA...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCTGCTATAATCTTATGGGACCACTACTGTATATGTGGTCCCTCATTGACCAAAAAGAAACTGGAACCCTaGTGCATTACTGGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: SAIILWDHYCICGPSLTKKKLEP*CITGCN
Trigger: ATTACAACCAGTAATGCACAAGGGTTCCAGTTTCTT...TTTGGTCAATGAGGGACCACATATACAGTAGTGGTCCCATAAGATTATAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586187.2
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCACAGCTTTTCTCCTaGGGCAATGTTTTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSQLFS*GNVFLL
Trigger: AAGCAAGAAAACATTGCCCAAGGAGAAAAGCTGTGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000542455.2
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATTATGGAGAACAGCTCTaGATTTTGGTACCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYYGEQL*ILVPCL
Trigger: AAGACAGGGTACCAAAATCAAGAGCTGTTCTCCATA...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTATGGAGAACAGCTCTaGATTTTGGTACCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSYGEQL*ILVPCL
Trigger: AAGACAGGGTACCAAAATCAAGAGCTGTTCTCCATA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATTTATTTTCTAATATGGATGACATAGCAACTCAGGGAAGCAGACTTCTTTCCTCTGAGTGTCCTGTGTaGGTAAAGTTAATATCTCCC +
Preference number: 5 (lower is better)
Translates to: HLFSNMDDIATQGSRLLSSECPV*VKLISP
Trigger: GGGAGATATTAACTTTACCAACACAGGACACTCAGA...GGAAAGAAGTCTGCTTCCCTGAGTTGCTATGTCATCCATATTAGAAAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp ATATCTACCTTGCATTTTTCACTCAAGAGAACATTGTGGAATTCCACTCAAGTCTCTGAGTGTCCTGTGTaGGTAAAGTTAATATCTCCC +
Preference number: 5 (lower is better)
Translates to: ISTLHFSLKRTLWNSTQVSECPV*VKLISP
Trigger: GGGAGATATTAACTTTACCAACACAGGACACTCAGA...GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGAAAAATGCAAGGTAGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCCATTGGCCACTTAGATTTGCTCTTCTCACAACTGTCAACTCATATTCTTTGCACAATCTATTATCTCTaGAGTTTGCTGATGGCATCT +
Preference number: 5 (lower is better)
Translates to: SIGHLDLLFSQLSTHILCTIYYL*SLLMAS
Trigger: AGATGCCATCAGCAAACTCAAGAGATAATAGATTGT...GCAAAGAATATGAGTTGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATTGGCCACTTAGATTaGCTCTTCTCACAACTGTCA +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSIGHLD*LFSQLS
Trigger: TGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp TCAGCTTTACAAATATTTCCCCACAATCTATTATCTCTTGAGTTTGCTGATGGCATTGGCCACTTAGATTaGCTCTTCTCACAACTGTCA +
Preference number: 5 (lower is better)
Translates to: SALQIFPHNLLSLEFADGIGHLD*LFSQLS
Trigger: TGACAGTTGTGAGAAGAGCAAATCTAAGTGGCCAAT...GCCATCAGCAAACTCAAGAGATAATAGATTGTGGGGAAATATTTGTAAAGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAAATCTTTTTGCTCTGTaGCCCAGGTTGGAGTGCAAT +
Preference number: 5 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGNLFAL*PRLECN
Trigger: ATTGCACTCCAACCTGGGCAACAGAGCAAAAAGATT...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTTCACTCAAGAGAACATaGTGGAATTCCACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLISLKRT*WNSTQV
Trigger: GACTTGAGTGGAATTCCACAATGTTCTCTTGAGTGA...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445217.5
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CTTTCTCATTCTGGATCAGGCAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGAGAACTCAGTAAATTaGTTTTCTAACCACGGGCAA +
Preference number: 5 (lower is better)
Translates to: LSHSGSGSLTWREILKNVENSVN*FSNHGQ
Trigger: TTGCCCGTGGTTAGAAAACAAATTTACTGAGTTCTC...TACATTTTTCAAGATTTCCCTCCATGTAAGACTGCCTGATCCAGAATGAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588578.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAAGAGAACTCAGTAAATTaGTTTTCTAACCACGGGCAA +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQENSVN*FSNHGQ
Trigger: TTGCCCGTGGTTAGAAAACAAATTTACTGAGTTCTC...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp GACAATGCAAAGGTATTCAGAAAACTTATTACCCTTCTCCACCAAGGTAACCAACCTTCTCAGTATCTGTaGAGAGTTCATATGATTCTT +
Preference number: 5 (lower is better)
Translates to: DNAKVFRKLITLLHQGNQPSQYL*RVHMIL
Trigger: AAGAATCATATGAACTCTCAACAGATACTGAGAAGG...TTGGTTACCTTGGTGGAGAAGGGTAATAAGTTTTCTGAATACCTTTGCATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CACTCAAGAGAACATTGTGGAATTCCACTCAAGTCCACTAGCATAGTTTTAATTGTCAACTCATATTCTTaGCCACATTTTGCTATTGGG +
Preference number: 5 (lower is better)
Translates to: HSREHCGIPLKSTSIVLIVNSYS*PHFAIG
Trigger: CCCAATAGCAAAATGTGGCAAAGAATATGAGTTGAC...AATTAAAACTATGCTAGTGGACTTGAGTGGAATTCCACAATGTTCTCTTGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTGTCAACTCATATTCTTaGCCACATTTTGCTATTGGG +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSVNSYS*PHFAIG
Trigger: CCCAATAGCAAAATGTGGCAAAGAATATGAGTTGAC...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTATTACAGAGCAGAGGTaGGCAAACTTATTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSITEQR*ANLFLR
Trigger: CCTTAAGAATAAGTTTGCCAACCTCTGCTCTGTAAT...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CAA 90 bp CAGTCTTACATGGAGGGAAATCTTGAAAAATGTAGATTCCACATGGCCATTTATATTACAGAGCAGAGGTaGGCAAACTTATTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: QSYMEGNLEKCRFHMAIYITEQR*ANLFLR
Trigger: CCTTAAGAATAAGTTTGCCAACCTCTGCTCTGTAAT...ATAAATGGCCATGTGGAATCTACATTTTTCAAGATTTCCCTCCATGTAAGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS-3UTR CAA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTGGGAGTGATTTAAATTaGAGTGCAGAAATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEIGSDLN*SAEIRE
Trigger: TTCCCTAATTTCTGCACTCAAATTTAAATCACTCCC...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp CTGATCCCACAGTCATCTGTCTATGGGAGTGATTTAAATTTGAGTGCAGAAATTAGTGGTTCCTGTGACTaGATACTAGTTTGTGAATAT +
Preference number: 5 (lower is better)
Translates to: LIPQSSVYGSDLNLSAEISGSCD*ILVCEY
Trigger: ATATTCACAAACTAGTATCAAGTCACAGGAACCACT...AATTTCTGCACTCAAATTTAAATCACTCCCATAGACAGATGACTGTGGGATCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587986.5
CDS-3UTR CAA 90 bp AATAATGCTGATTGTATGGCTCACTGTGGAATATACCAGAGTATGCCTTTAAGTTTGTCACCCAAAAGATaGTACCAAAAGATTCTACGT +
Preference number: 5 (lower is better)
Translates to: NNADCMAHCGIYQSMPLSLSPKR*YQKILR
Trigger: ACGTAGAATCTTTTGGTACAATCTTTTGGGTGACAA...ACTTAAAGGCATACTCTGGTATATTCCACAGTGAGCCATACAATCAGCATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGAGAGAACTCAGTAAATTaGTTTTCTAACCACGGGCAA +
Preference number: 5 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGENSVN*FSNHGQ
Trigger: TTGCCCGTGGTTAGAAAACAAATTTACTGAGTTCTC...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000589319.5
ENST00000627814.3
CDS-3UTR CAA 90 bp CATGTTCACATGTTCATCTGTCTTTTATGTATTGGAGCTTTTACTTCTAAGGGACCTTCTCAGTATCTGTaGAGAGTTCATATGATTCTT +
Preference number: 5 (lower is better)
Translates to: HVHMFICLLCIGAFTSKGPSQYL*RVHMIL
Trigger: AAGAATCATATGAACTCTCAACAGATACTGAGAAGG...TCCCTTAGAAGTAAAAGCTCCAATACATAAAAGACAGATGAACATGTGAACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445217.5
ENST00000627814.3
CDS CCA 72 bp CTGGCAGGAGCTAGAGAGCCCTCCCGTCCAGCAAGGTaGCAGGATCCAAAGGTCTGCAGGGCACCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LAGAREPSRPAR*QDPKVCRAPRE
Trigger: TTCTCTGGGTGCCCTGCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGAGGGCTCTCTAGCTCCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587986.5
ENST00000588578.5
ENST00000589319.5
ENST00000627814.3
CDS CCA 72 bp CAATCGGTAGGCCACAGTTTGCTGATCCCCCAACAGTaGCAGCCCGGGCATGCTGCCTCACCAATCCATGGT +
Preference number: 6 (lower is better)
Translates to: QSVGHSLLIPQQ*QPGHAASPIHG
Trigger: ACCATGGATTGGTGAGGCAGCATGCCCGGGCTGCCACTGTTGGGGGATCAGCAAACTGTGGCCTACCGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS CAA 72 bp ATTCACAAAGCAGGTGGCCAATCGGTAGGCCACAGTTaGCTGATCCCCCAACAGTGGCAGCCCGGGCATGCT +
Preference number: 6 (lower is better)
Translates to: IHKAGGQSVGHS*LIPQQWQPGHA
Trigger: AGCATGCCCGGGCTGCCACTGTTGGGGGATCAGCAAACTGTGGCCTACCGATTGGCCACCTGCTTTGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542455.2
ENST00000588578.5
CDS GCA 72 bp CCCTCCCGTCCAGCAAGGTGGCAGGATCCAAAGGTCTaGAGGGCACCCAGAGAACTCAGTAAATTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: PSRPARWQDPKV*RAPRELSKFVF
Trigger: GAAAACAAATTTACTGAGTTCTCTGGGTGCCCTGCAGACCTTTGGATCCTGCCACCTTGCTGGACGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587986.5
ENST00000588578.5
ENST00000589319.5
ENST00000627814.3
CDS GCA 72 bp TTGGGATGCTGGCACAGATGCGTATGTCATTACCTTTaGCAGAAAGAGCTCCCGCAAACCTCTGTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: LGCWHRCVCHYL*QKELPQTSVRH
Trigger: GTGGCGGACAGAGGTTTGCGGGAGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS GCA 72 bp CAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: QKPASLLGCWHR*VCHYLCQKEPR
Trigger: CCGCGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS CAA 72 bp CTTGGGATGCTGGCACAGATGCGTATGTCATTACCTTaGCCAGAAAGAGCTCCCGCAAACCTCTGTCCGCCA +
Preference number: 6 (lower is better)
Translates to: LGMLAQMRMSLP*PERAPANLCPP
Trigger: TGGCGGACAGAGGTTTGCGGGAGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS TCA 72 bp AACACTCAGATATGGGCGGTGGGGTTGCATGGAGGTTaGAGAGTCATTAACGTGGCTGAAGCTCTCGGAGGA +
Preference number: 6 (lower is better)
Translates to: NTQIWAVGLHGG*RVINVAEALGG
Trigger: TCCTCCGAGAGCTTCAGCCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS GCA 72 bp CAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: QKPASLLGCWHR*VCHYLCQKELP
Trigger: CGGGAGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588578.5
CDS GCA 72 bp TTGGGATGCTGGCACAGATGCGTATGTCATTACCTTTaGCAGAAAGAGCCGCGGTATAAGGTCGTCCCATCC +
Preference number: 6 (lower is better)
Translates to: LGCWHRCVCHYL*QKEPRYKVVPS
Trigger: GGATGGGACGACCTTATACCGCGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627814.3
CDS GCA 72 bp CAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: QKPASLLGCWHR*VCHYLCQKEPH
Trigger: ATGGGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586138.5
ENST00000587986.5
CDS GCA 72 bp GAGCCGAGAAAAACACTCAGATATGGGCGGTGGGGTTaGATGGAGGTTGAAGAGTCATTAACGTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: EPRKTLRYGRWG*MEVEESLTWLK
Trigger: CTTCAGCCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS GCA 72 bp TTGGGATGCTGGCACAGATGCGTATGTCATTACCTTTaGCAGAAAGAGCCGTTTCTCAAACCGTGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LGCWHRCVCHYL*QKEPFLKPCLP
Trigger: GGGAAGGCACGGTTTGAGAAACGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587143.5
CDS CCA 72 bp AAGGTCACATCCATCCCCGCTGTCACAGAGTCAGAATaGATTTCCAGAAACCAGCCTCACTCTTGGGATGCT +
Preference number: 6 (lower is better)
Translates to: KVTSIPAVTESE*ISRNQPHSWDA
Trigger: AGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCATTCTGACTCTGTGACAGCGGGGATGGATGTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586138.5
ENST00000587143.5
ENST00000587986.5
ENST00000588578.5
ENST00000589319.5
ENST00000627814.3
CDS CAA 72 bp CTTGGGATGCTGGCACAGATGCGTATGTCATTACCTTaGCCAGAAAGAGCCGTTTCTCAAACCGTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LGMLAQMRMSLP*PERAVSQTVPS
Trigger: GGAAGGCACGGTTTGAGAAACGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587143.5
CDS GCA 72 bp CAGAAACCAGCCTCACTCTTGGGATGCTGGCACAGATaGGTATGTCATTACCTTTGCCAGAAAGAGCCGTTT +
Preference number: 6 (lower is better)
Translates to: QKPASLLGCWHR*VCHYLCQKEPF
Trigger: AAACGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587143.5
CDS CCA 72 bp CCTGGCCTCAAAAGCATGTCTTGCCGTCTTTTCCTCTaGATATTAACTCGCCAGATGTCTTCCCAACAGTGG +
Preference number: 6 (lower is better)
Translates to: PGLKSMSCRLFL*ILTRQMSSQQW
Trigger: CCACTGTTGGGAAGACATCTGGCGAGTTAATATCCAGAGGAAAAGACGGCAAGACATGCTTTTGAGGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445217.5
ENST00000587143.5
ENST00000589319.5
ENST00000627814.3
CDS CCA 72 bp CAAGTAGAGCCGAGAAAAACACTCAGATATGGGCGGTaGGGTTGCATGGAGGTTGAAGAGTCATTAACGTGG +
Preference number: 6 (lower is better)
Translates to: QVEPRKTLRYGR*GCMEVEESLTW
Trigger: CCACGTTAATGACTCTTCAACCTCCATGCAACCCCACCGCCCATATCTGAGTGTTTTTCTCGGCTCTACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587490.5
ENST00000587986.5
CDS CAA 72 bp CTTGGGATGCTGGCACAGATGCGTATGTCATTACCTTaGCCAGAAAGAGCCCCATGCACCCTGAAAATCAAG +
Preference number: 6 (lower is better)
Translates to: LGMLAQMRMSLP*PERAPCTLKIK
Trigger: CTTGATTTTCAGGGTGCATGGGGCTCTTTCTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586138.5
ENST00000587986.5
CDS GCA 72 bp AGAATGGATTTCCAGAAACCAGCCTCACTCTTGGGATaGTGGCACAGATGCGTATGTCATTACCTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: RMDFQKPASLLG*WHRCVCHYLCQ
Trigger: CTGGCAAAGGTAATGACATACGCATCTGTGCCAGCATCCCAAGAGTGAGGCTGGTTTCTGGAAATCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000586138.5
ENST00000587143.5
ENST00000587986.5
ENST00000588578.5
ENST00000589319.5
ENST00000627814.3
CDS CAA 72 bp AAATTCCAAAGGTGCCAGCCTCCTTCAGTACCCCTTTaGCTAGATTTATCACACTTACCCCAACAGTGGCAG +
Preference number: 6 (lower is better)
Translates to: KFQRCQPPSVPL*LDLSHLPQQWQ
Trigger: CTGCCACTGTTGGGGTAAGTGTGATAAATCTAGCAAAAGGGGTACTGAAGGAGGCTGGCACCTTTGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587986.5