RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF792 (Homo sapiens)

Ensembl gene IDs: ENSG00000180884

Ensembl transcript IDs: ENST00000404801.2, ENST00000605484.1

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGGGCGGGAATGACATCTTCCCAAGGC +
Preference number: 1 (lower is better)
Translates to: QNPAQVFTAKSWSCP*LNQPYRAGMTSSQG
Trigger: GCCTTGGGAAGATGTCATTCCCGCCCTGTATGGCTGGTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR CCA 90 bp ACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTaGTCATGTCCATGGCTAAACCAGCCATACAGGGCGGGAATGACA +
Preference number: 1 (lower is better)
Translates to: TSCWQNPAQVFTAKS*SCPWLNQPYRAGMT
Trigger: TGTCATTCCCGCCCTGTATGGCTGGTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR GCA 90 bp TATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATACCTaGCTAATGCTGAACTTCAGGGCATATGGCTCCTTGGCAGGTGCT +
Preference number: 1 (lower is better)
Translates to: YGPSWAWYVLQLRDT*LMLNFRAYGSLAGA
Trigger: AGCACCTGCCAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR GCA 90 bp AGTCCCTATAGTATAGGATCTGCTTTTTCTCAGTCCCTATTTTCCTaGCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTA +
Preference number: 1 (lower is better)
Translates to: SPYSIGSAFSQSLFS*QHSTGLQMHSTEMV
Trigger: TACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAAAAAGCAGATCCTATACTATAGGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 90 bp GATCTTAACTCTGCTCTTGAACCACCCCACACAGTGATCAGAACATaGAAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACAT +
Preference number: 1 (lower is better)
Translates to: DLNSALEPPHTVIRT*KTKGGFIIRPLSSH
Trigger: ATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTTCCATGTTCTGATCACTGTGTGGGGTGGTTCAAGAGCAGAGTTAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR TCA 90 bp ACATCCAGTGTTTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACGAGGTCTGCCTTCCCTaGGCACAGTGGAGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: TSSVSVQIMVPAGPGMSYEVCLP*AQWSGG
Trigger: TCCACCACTCCACTGTGCTCAGGGAAGGCAGACCTC...GTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAAACACTGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTGGTGGACACACTCTTTaGAGAGCTGCAGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAGGHTL*RAAVCG
Trigger: ACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCCTGAGCACAGTGGAGTaGTGGACACACTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSLSTVE*WTHSLE
Trigger: CTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAG...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CCA 90 bp TCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGATCTAGAACAAGCTGTTaGCAAAACCCTGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: SVPIFLPAQHWPSDAQHGSRTSC*QNPAQV
Trigger: GACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGA...TCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR TCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTTGCAGTGTGTGGTGCTaGCATGGCTTCTATCACAAC +
Preference number: 2 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMACSVWC*HGFYHN
Trigger: GTTGTGATAGAAGCCATGTCAGCACCACACACTGCA...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR TCA 90 bp GTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGATAATTTCTGCAAACCCTaGATCCTGCACAGCCACATT +
Preference number: 2 (lower is better)
Translates to: VPIFLPAQHWPSDAQHGDNFCKP*ILHSHI
Trigger: AATGTGGCTGTGCAGGATTCAGGGTTTGCAGAAATT...ATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR TCA 90 bp TTCTCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACTTCACAGGCATAACATaGGACCAACAATGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: FSVPIFLPAQHWPSDAQHFTGIT*DQQCPR
Trigger: TCTGGGACATTGTTGGTCTCATGTTATGCCTGTGAA...GTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR TCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCATACAGGGCGGGAATaGCATCTTCCCAAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAHTGRE*HLPKAS
Trigger: TGAAGCCTTGGGAAGATGTCATTCCCGCCCTGTATG...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR TCA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAAACCACCCCACACAGTaGTCAGAACATGGAAGACTA +
Preference number: 2 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKNHPTQ*SEHGRL
Trigger: TAGTCTTCCATGTTCTGATCACTGTGTGGGGTGGTT...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp ACATCCAGTGTTTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGCACAGTGGAGTGGTaGACACACTCTTTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: TSSVSVQIMVPAGPGMSYSTVEW*THSLES
Trigger: GCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCT...GTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAAACACTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGAGCACAGTGGAGTGGTaGACACACTCTTTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: QGFRLLLIPFRDWKERGESTVEW*THSLES
Trigger: GCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCT...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR TCA 90 bp TGTCATCTCTTTCTTCTTGCCTTGGGAGCAAAGAATGGCTGGCTACGTCATAGATGCAGTGTGTGGTGCTaGCATGGCTTCTATCACAAC +
Preference number: 2 (lower is better)
Translates to: CHLFLLALGAKNGWLRHRCSVWC*HGFYHN
Trigger: GTTGTGATAGAAGCCATGTCAGCACCACACACTGCA...TCTATGACGTAGCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAGATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp ACATCCAGTGTTTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGG +
Preference number: 2 (lower is better)
Translates to: TSSVSVQIMVPAGPGMSYSWSCP*LNQPYR
Trigger: CCTGTATGGCTGGTTTAGCCATGGACATGACCAGCT...GTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAAACACTGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp CAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTTCTGCTTTACAGTATTaGGGAATATGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: QLGLVCLTVKRYLPNAELSALQY*GIWGTP
Trigger: GGGGGTGCCCCATATTCCCCAATACTGTAAAGCAGA...AAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR TCA 90 bp TCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTTCACAACCCCAGCAGTaGAAAAACGCTGATAAACTC +
Preference number: 2 (lower is better)
Translates to: SLEQAVGKTLLRSSQPKASQPQQ*KNADKL
Trigger: GAGTTTATCAGCGTTTTTTCACTGCTGGGGTTGTGA...AGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR TCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCTCACAACCCCAGCAGTaGAAAAACGCTGATAAACTC +
Preference number: 2 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVSQPQQ*KNADKL
Trigger: GAGTTTATCAGCGTTTTTTCACTGCTGGGGTTGTGA...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CCA 90 bp AGATTATTTGCTCTGCCAGTAACATTAGTCATAGGACAGAGGTCTGAGGTCCTGTGTGTGGTGCTGACATaGCTTCTATCACAACCCCAG +
Preference number: 2 (lower is better)
Translates to: RLFALPVTLVIGQRSEVLCVVLT*LLSQPQ
Trigger: CTGGGGTTGTGATAGAAGCCATGTCAGCACCACACA...CAGGACCTCAGACCTCTGTCCTATGACTAATGTTACTGGCAGAGCAAATAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAAGGTGGACACACTCTTTaGAGAGCTGCAGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQGGHTL*RAAVCG
Trigger: ACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATCTGAGCACAGTGGAGTaGTGGACACACTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDLSTVE*WTHSLE
Trigger: CTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAG...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp AACATGAAGGCTGGACAAATCCTTCACAGGCATAACATGAGACCAACAATGTCCAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGG +
Preference number: 2 (lower is better)
Translates to: NMKAGQILHRHNMRPTMSSWSCP*LNQPYR
Trigger: CCTGTATGGCTGGTTTAGCCATGGACATGACCAGCT...GGACATTGTTGGTCTCATGTTATGCCTGTGAAGGATTTGTCCAGCCTTCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CCA 90 bp CAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTATTCCCTTTAGGGATTaGAAAGAGAGAGGAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QLGLVCLTVKRYLPNAELIPFRD*KERGEV
Trigger: GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAAT...AAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp TTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATGGCTCCTTGGCAGGTACAGTGATCAGAACATaGAAGACTAAAGGCGGCTTT +
Preference number: 2 (lower is better)
Translates to: LRDTCLMLNFRAYGSLAGTVIRT*KTKGGF
Trigger: AAAGCCGCCTTTAGTCTTCCATGTTCTGATCACTGT...ACCTGCCAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CAA 90 bp TTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATGGCTCCTaGGCAGGTGCTAAACAGCATCTGCTTTACAGTATTGGGGAATAT +
Preference number: 2 (lower is better)
Translates to: LRDTCLMLNFRAYGS*AGAKQHLLYSIGEY
Trigger: ATATTCCCCAATACTGTAAAGCAGATGCTGTTTAGCACCTGCCAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR GCA 90 bp AGATTATTTGCTCTGCCAGTAACATTAGTCATAGGACAGAGGTCTGAGGTCCTGGCAGAGTTCCATTTCTaGTGGTTTGCTATAATCTCG +
Preference number: 2 (lower is better)
Translates to: RLFALPVTLVIGQRSEVLAEFHF*WFAIIS
Trigger: CGAGATTATAGCAAACCAGCAGAAATGGAACTCTGC...CAGGACCTCAGACCTCTGTCCTATGACTAATGTTACTGGCAGAGCAAATAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CCA 90 bp CTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATTCACAGCCAAAAGCTaGTCATGTCCATGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: LVCLTVKRYLPNAELQGIFTAKS*SCPWLN
Trigger: GTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAA...TATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 72 bp TGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTaGTCATGTCCATGGCTAAACCAGCCATACAGGGCG +
Preference number: 3 (lower is better)
Translates to: WQNPAQVFTAKS*SCPWLNQPYRA
Trigger: CGCCCTGTATGGCTGGTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CAA 90 bp CCTGAATCCTGCACAGCCACATTCAAGGGAGCATTCACGGATGCACATTTAGCACACATGCACTGGAGGTaGTCACAACTGCCCCCTCCT +
Preference number: 3 (lower is better)
Translates to: PESCTATFKGAFTDAHLAHMHWR*SQLPPP
Trigger: AGGAGGGGGCAGTTGTGACAACCTCCAGTGCATGTG...TGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGTGGCTGTGCAGGATTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 72 bp GCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGGGCGGGAATGACATCT +
Preference number: 3 (lower is better)
Translates to: AQVFTAKSWSCP*LNQPYRAGMTS
Trigger: AGATGTCATTCCCGCCCTGTATGGCTGGTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR-3UTR CAA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCTGGTGGACACACTCTTaGGAGAGCTGCAGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVWWTHS*ESCSVW
Trigger: CCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCA...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR TCA 72 bp GCCTTGGTGGCAATGCAAATGAGGTCAAATCTGGATTaGCAGTTGTTTCTCTGCCATCCTCCTGTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: ALVAMQMRSNLD*QLFLCHPPVPS
Trigger: GGAGGGGACAGGAGGATGGCAGAGAAACAACTGTCAATCCAGATTTGACCTCATTTGCATTGCCACCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CAA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGTGGTGGACACACTCTTaGGAGAGCTGCAGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: QGFRLLLIPFRDWKERGEWWTHS*ESCSVW
Trigger: CCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCA...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR TCA 72 bp TGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTaGCATGGCTTCTATCACAACCCCAGCAGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: WTHSLESCSVWC*HGFYHNPSSEK
Trigger: TTTTTCACTGCTGGGGTTGTGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR GCA 72 bp AGTATAGGATCTGCTTTTTCTCAGTCCCTATTTTCCTaGCAGCACAGCACTGGCCTTCAGATGCACAGCACG +
Preference number: 3 (lower is better)
Translates to: SIGSAFSQSLFS*QHSTGLQMHST
Trigger: CGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAAAAAGCAGATCCTATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 72 bp TTTTTCTCAGTCCCTATTTTCCTGCCAGCACAGCACTaGCCTTCAGATGCACAGCACGGAGATGGTAATCCA +
Preference number: 3 (lower is better)
Translates to: FFSVPIFLPAQH*PSDAQHGDGNP
Trigger: TGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CAA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACAGTAAGAGAATGTAACTaGTCTCCAGAAAGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTVRECN*SPESFQ
Trigger: TTGGAAGCTTTCTGGAGACAAGTTACATTCTCTTAC...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR GCA 72 bp AGCTGGGCCTGGTATGTCTTACAGTTAAGAGATACCTaGCTAATGCTGAACTTCAGGGCATATGGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: SWAWYVLQLRDT*LMLNFRAYGSL
Trigger: CAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR GCA 72 bp ATCCTGCACAGCCACATTCAAGGGAGCATTCACGGATaGACATTTAGCAGAGTTCCATTTCTGCTGGTTTGC +
Preference number: 3 (lower is better)
Translates to: ILHSHIQGSIHG*TFSRVPFLLVC
Trigger: GCAAACCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGTGGCTGTGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR-3UTR CAA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCAGTAAGAGAATGTAACTaGTCTCCAGAAAGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSVRECN*SPESFQ
Trigger: TTGGAAGCTTTCTGGAGACAAGTTACATTCTCTTAC...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
3UTR TCA 72 bp TTCCTAGGGAAGGCAAGGAGGGAATGTAAAGGGGCATaGGGTAGCTTTGCAGGTGATGGATACGTTCATTAT +
Preference number: 3 (lower is better)
Translates to: FLGKARRECKGA*GSFAGDGYVHY
Trigger: ATAATGAACGTATCCATCACCTGCAAAGCTACCTCATGCCCCTTTACATTCCCTCCTTGCCTTCCCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 72 bp CAGTGTTTCTGTACAAATTATGGTCCCAGCTGGGCCTaGTATGTCTTACAGTTAAGAGATACCTGCCTAATG +
Preference number: 3 (lower is better)
Translates to: QCFCTNYGPSWA*YVLQLRDTCLM
Trigger: CATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAAACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR GCA 72 bp GGATGCACATTTAGCAGAGTTCCATTTCTGCTGGTTTaGTATAATCTCGCCTACTCCCTATTAATCACATCC +
Preference number: 3 (lower is better)
Translates to: GCTFSRVPFLLV*YNLAYSLLITS
Trigger: GGATGTGATTAATAGGGAGTAGGCGAGATTATAGCAAACCAGCAGAAATGGAACTCTGCTAAATGTGCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
3UTR CCA 72 bp CATCTCTTTCTTCTTGCCTTGGGAGCAAAGAATGGCTaGCTACGTCATAGATACTACAGTCCCTATAGTATA +
Preference number: 3 (lower is better)
Translates to: HLFLLALGAKNG*LRHRYYSPYSI
Trigger: TATACTATAGGGACTGTAGTATCTATGACGTAGCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGCCACCCACCTGGCCGTaGCCCAGACGAGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLPPTWP*PRRGVT
Trigger: GGTCACACCTCGTCTGGGGCACGGCCAGGTGGGTGG...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp GGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCAAGGTCACGCAGCCCTaGGCGGGGTCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGHTLWRAAVCGADMASIKVTQP*AGSRSA
Trigger: GGCGCTGCGGGACCCCGCGCAGGGCTGCGTGACCTT...GATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp GTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGATAGGGGTCACGGCTGGTaGAAAGGCGCGGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VPIFLPAQHWPSDAQHGDRGHGW*KGAEGV
Trigger: GACCCCCTCCGCGCCTTTGCACCAGCCGTGACCCCT...ATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCCACCACACCTTCGGTaGCCTCGTGCGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVPPHLR*PRAAPH
Trigger: ATGGGGAGCCGCACGAGGCCACCGAAGGTGTGGTGG...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp CCTGAATCCTGCACAGCCACATTCAAGGGAGCATTCACGGATGCACATTTAGCAGCCCCAGACGAGGTGTaGCCCCGGGCTGAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PESCTATFKGAFTDAHLAAPDEV*PRAEGR
Trigger: GCGACCCTCAGCCCGGGGTCACACCTCGTCTGGGGC...TGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGTGGCTGTGCAGGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAGCGCGCAGCTCCGCTaGGTACCCCCGTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASSAQLR*VPPLQG
Trigger: CCCTTGCAACGGGGGTACCCAGCGGAGCTGCGCGCT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCAGGGGCAGGTCTTCTaGGGGCACAGAGTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVQGQVF*GHRVAS
Trigger: CGAGGCAACTCTGTGCCCCCAGAAGACCTGCCCCTG...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGATGTACTGTCATTGGCCTaGCGCCAGCCGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VPIFLPAQHWPSDAQHGDVLSLA*RQPLVH
Trigger: GTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTAC...ATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAATTCCGGCCCCCACCGTaGCGGCCGGGAGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKFRPPP*RPGELP
Trigger: GGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAA...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCGGGGGTCTCGCAGGCTaGGGCTACCACCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVGGLAG*GYHPPG
Trigger: GCCAGGTGGGTGGTAGCCTCAGCCTGCGAGACCCCC...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACACCCCATCGCTGGGAGTaGCCTCACACTGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTPHRWE*PHTAET
Trigger: GGTTTCTGCAGTGTGAGGTCACTCCCAGCGATGGGG...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCCTGGGGGCACAGAGTTaGCTCGGGACTCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGHTLWRAAVCGADMASILGAQS*LGTPVL
Trigger: CAGGACAGGAGTCCCGAGGCAACTCTGTGCCCCCAG...GATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCCTTCGGTGGCCTCGTaGGGCTCCCCATCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LEQAVGKTLLRSSQPKAGPSVAS*GSPSLG
Trigger: TCCCAGCGATGGGGAGCCGCACGAGGCCACCGAAGG...ACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TTTCTCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCAAGGCTACCACCCACCTaGCCGTGCCCCAGACGAGGT +
Preference number: 4 (lower is better)
Translates to: FLSPYFPASTALAFRCTARLPPT*PCPRRG
Trigger: ACCTCGTCTGGGGCACGGCCAGGTGGGTGGTAGCCT...TGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCACCACCACACCTTCGGTaGCCTCGTGCGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSPPHLR*PRAAPH
Trigger: ATGGGGAGCCGCACGAGGCCACCGAAGGTGTGGTGG...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCACAGGGACATTGGGTaGTCACGGCAAGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVHRDIG*SRQAVT
Trigger: GGTTACTGCTTGCCGTGACCACCCAATGTCCCTGTG...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR TCA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCGAGGTCTGCCTTCCCTaGGCACAGTGGAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVEVCLP*AQWSGG
Trigger: TCCACCACTCCACTGTGCTCAGGGAAGGCAGACCTC...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCATACAGGGCGGGAATaGCATCTTCCCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVHTGRE*HLPKAS
Trigger: TGAAGCCTTGGGAAGATGTCATTCCCGCCCTGTATG...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAAGGCGCCAGCCGCTGGTaGACAGGCAGGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQGASRW*TGRAWG
Trigger: TCCCCAGGCCCTGCCTGTGCACCAGCGGCTGGCGCC...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGGGAGGTTGTCACAACTaGCCCCTCCTCGGGATAAAA +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVGGCHN*PLLGIK
Trigger: TTTTATCCCGAGGAGGGGGCAGTTGTGACAACCTCC...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGGGTGGACACACTCTTTaGAGAGCTGCAGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLGGHTL*RAAVCG
Trigger: ACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGGGTCAGCGGCGTAAGTaGAGAAGATTCCACATTTGC +
Preference number: 4 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLGQRRK*RRFHIC
Trigger: GCAAATGTGGAATCTTCTTCACTTACGCCGCTGACC...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGAGGTCTGCCTTCCCTaGGCACAGTGGAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFREVCLP*AQWSGG
Trigger: TCCACCACTCCACTGTGCTCAGGGAAGGCAGACCTC...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCACAGGAAGCTCCGTATaGCACAGGGACATTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGHTLWRAAVCGADMASITGSSV*HRDIGW
Trigger: CCACCCAATGTCCCTGTGTCATACGGAGCTTCCTGT...GATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR GCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGCTGGGTACCCCCGTTaGAAGGGGTCACGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGEAGYPR*KGSRLV
Trigger: CACCAGCCGTGACCCCTTGCAACGGGGGTACCCAGC...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp ATTCAAGGGAGCATTCACGGATGCACATTTAGCAGAGTTCCATTTCTGCTGGTTCCTTCGGTGGCCTCGTaGGGCTCCCCATCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: IQGSIHGCTFSRVPFLLVPSVAS*GSPSLG
Trigger: TCCCAGCGATGGGGAGCCGCACGAGGCCACCGAAGG...AACCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCTGCACAGGCAGGGCCTaGGGATCGCGAGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVCTGRA*GSRVSA
Trigger: GGCAGAAACTCGCGATCCCCAGGCCCTGCCTGTGCA...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGCTCCCGTACTGTCATTaGCCTGGCGCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGELPYCH*PGASRW
Trigger: CCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAG...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACAAAGCCCCTCTGGCCATaGCTGATGTCATATCCACAC +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTKPLWP*LMSYPH
Trigger: GTGTGGATATGACATCAGCCATGGCCAGAGGGGCTT...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCCAGGGGCAGGTCTTCTaGGGGCACAGAGTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVQGQVF*GHRVAS
Trigger: CGAGGCAACTCTGTGCCCCCAGAAGACCTGCCCCTG...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGTGTGTGGTGCTGACATaGCTTCTATCACAACCCCAG +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVCVVLT*LLSQPQ
Trigger: CTGGGGTTGTGATAGAAGCCATGTCAGCACCACACA...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGATCTGAGCACAGTGGAGTaGTGGACACACTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VPIFLPAQHWPSDAQHGDLSTVE*WTHSLE
Trigger: CTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAG...ATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACACTGAGCACAGTGGAGTaGTGGACACACTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTLSTVE*WTHSLE
Trigger: CTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAG...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGACAGAGTGGGTCAGTaGCCAGCACCTGCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRDRVGQ*PAPAQL
Trigger: CAACTGGGCAGGTGCTGGCCACTGACCCACTCTGTC...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR CCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAAGGGAAAGACAGAGTaGGTCAGTGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASKGKTE*VSGQHL
Trigger: CAGGTGCTGGCCACTGACCCACTCTGTCTTTCCCTT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR TCA 90 bp TGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCCCTCTGGCCATGGCTaGTGTCATATCCACACTGTC +
Preference number: 4 (lower is better)
Translates to: CWQNPAQVFTAKSWSCPWPSGHG*CHIHTV
Trigger: GACAGTGTGGATATGACATCAGCCATGGCCAGAGGG...CCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCAGGCCGTTCACCAGTGTaGAGTCTCCGATGGCTATTG +
Preference number: 4 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSGRSPV*SLRWLL
Trigger: CAATAGCCATCGGAGACTTCACACTGGTGAACGGCC...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTAATCAGAGCCAGGCCTaGCATAAGCCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEQAVGKTLLRSSQPKAGNQSQA*HKPLWP
Trigger: TGGCCAGAGGGGCTTATGGCAGGCCTGGCTCTGATT...ACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCAGAAGGTAAGTCCTTaGCCTCTGTTCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVQKVSP*PLFHGK
Trigger: TTTGCCATGGAACAGAGGGCAAGGACTTACCTTCTG...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp TGTCATCTCTTTCTTCTTGCCTTGGGAGCAAAGAATGGCTGGCTACGTCATAGACTGGGGGCACAGAGTTaGCTCGGGACTCCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CHLFLLALGAKNGWLRHRLGAQS*LGTPVL
Trigger: CAGGACAGGAGTCCCGAGGCAACTCTGTGCCCCCAG...TCTATGACGTAGCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAGATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACACTGATGTGTGGTCTCTaGAGGTCTTTACAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTLMCGL*RSLQGK
Trigger: CTTCCCCTGTAAAGACCTGCAGAGACCACACATCAG...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAACCTTCCCACCCTCCCTaGAGGTGGAAAGCTGATCTG +
Preference number: 4 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKPSHPP*RWKADL
Trigger: CAGATCAGCTTTCCACCTGCAGGGAGGGTGGGAAGG...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCTCAGTGGCCAGCACCTaGCCAGTTGAACTACCCCAT +
Preference number: 4 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSSVAST*PVELPH
Trigger: ATGGGGTAGTTCAACTGGGCAGGTGCTGGCCACTGA...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR CCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATGCAAGGGGTCACGGCTaGTGCAAAGGCGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDARGHG*CKGAEG
Trigger: CCCCTCCGCGCCTTTGCACCAGCCGTGACCCCTTGC...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTTTCCCCATCTCCAACTaGGAAACGATGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASFPISN*ETMWDL
Trigger: CAGGTCCCACATCGTTTCCCAGTTGGAGATGGGGAA...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAAGCCCCTCTGGCCATaGCTGATGTCATATCCACAC +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASKPLWP*LMSYPH
Trigger: GTGTGGATATGACATCAGCCATGGCCAGAGGGGCTT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGTGCCTCACACACAAATaGTTTCTGCCTGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVCLTHK*FLPGMC
Trigger: ACACATCCCAGGCAGAAACCATTTGTGTGTGAGGCA...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGGCAGAAACCCTGCTGTaGCCACAAAGTCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CWQNPAQVFTAKSWSCPWAETLL*PQSPSH
Trigger: GTGGGAAGGACTTTGTGGCCACAGCAGGGTTTCTGC...CCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGG +
Preference number: 4 (lower is better)
Translates to: SVPIFLPAQHWPSDAQHGSWSCP*LNQPYR
Trigger: CCTGTATGGCTGGTTTAGCCATGGACATGACCAGCT...TCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGTCTAGAACAAGCTGTTaGCAAAACCCTGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVSRTSC*QNPAQV
Trigger: GACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGA...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTGGGGAAGGTTTGCACTaGACTCAGAGCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASGEGLH*TQSLSH
Trigger: ATGTGAAAGGCTCTGAGTTCAGTGCAAACCTTCCCC...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGTTCACAGGCATAACATaGGACCAACAATGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLFTGIT*DQQCPR
Trigger: TCTGGGACATTGTTGGTCTCATGTTATGCCTGTGAA...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GCAAATGAGGTCAAATCTGGATTGACAGTTGTTTCTCTGCCATCCTCCTGTCCCAATGACCTGCGAGGCTaGAGTGCAGGAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ANEVKSGLTVVSLPSSCPNDLRG*SAGSSG
Trigger: GCCGGAACTTCCTGCACTGCAGCCTCGCAGGTCATT...GGGACAGGAGGATGGCAGAGAAACAACTGTCAATCCAGATTTGACCTCATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAAATCAGAGCCAGGCCTaGCATAAGCCCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKNQSQA*HKPLWP
Trigger: TGGCCAGAGGGGCTTATGGCAGGCCTGGCTCTGATT...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCATTGTGTACGTTCTGCTaGACCTGTTTCCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSLCTFC*TCFRGR
Trigger: CCTTCCCCGGAAACAGGTGCAGCAGAACGTACACAA...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCTTGTGTACGTTCTGCTaGACCTGTTTCCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVLCTFC*TCFRGR
Trigger: CCTTCCCCGGAAACAGGTGCAGCAGAACGTACACAA...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTCAGTCCCTATTTTCCTaGCAGCACAGCACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAQSLFS*QHSTGL
Trigger: AAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTG...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTTTCCCCATCTCCAACTaGGAAACGATGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAFPISN*ETMWDL
Trigger: CAGGTCCCACATCGTTTCCCAGTTGGAGATGGGGAA...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGCCTCACACACAAATaGTTTCTGCCTGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTCLTHK*FLPGMC
Trigger: ACACATCCCAGGCAGAAACCATTTGTGTGTGAGGCA...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTTTTACAGGGGAAGCCTaGCCCTCCTCCGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAFTGEA*PSSVLI
Trigger: TATCAGAACGGAGGAGGGCCAGGCTTCCCCTGTAAA...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCCACCCTCCCTGCAGGTaGAAAGCTGATCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSHPPCR*KADLMC
Trigger: ACACATCAGATCAGCTTTCCACCTGCAGGGAGGGTG...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp TCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACGGAGAGTGGATTTGTTATTaGAGGCATCCCCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: SVPIFLPAQHWPSDAQHGEWICY*RHPQIH
Trigger: GTGAATCTGGGGATGCCTTCAATAACAAATCCACTC...TCCGTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCAGGTCAGCGGCGTAAGTaGAGAAGATTCCACATTTGC +
Preference number: 4 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSGQRRK*RRFHIC
Trigger: GCAAATGTGGAATCTTCTTCACTTACGCCGCTGACC...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGGGCTTTCACCGGTGTaGACCCTGCGATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRGLSPV*TLRCLT
Trigger: TGTTAAACATCGCAGGGTTCACACCGGTGAAAGCCC...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATGGCCTGTCTGGTTTGTaGACTTTCAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDGLSGL*TFRCCL
Trigger: GAGGCAGCACCTGAAAGTTCACAAACCAGACAGGCC...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCTGCAGTGTGTGGTGCTaGCATGGCTTCTATCACAAC +
Preference number: 4 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVCSVWC*HGFYHN
Trigger: GTTGTGATAGAAGCCATGTCAGCACCACACACTGCA...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCGCCATTATCATCACATaGACCAGGGCAATACACAGG +
Preference number: 4 (lower is better)
Translates to: GGHTLWRAAVCGADMASIAIIIT*TRAIHR
Trigger: CCTGTGTATTGCCCTGGTTCATGTGATGATAATGGC...GATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAACCACCCCACACAGTaGTCAGAACATGGAAGACTA +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASNHPTQ*SEHGRL
Trigger: TAGTCTTCCATGTTCTGATCACTGTGTGGGGTGGTT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATAGGCGGCCGGGAGAGTTaGCCTCTCCCGTACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LVCLTVKRYLPNAELQGIGGRES*PLPYCH
Trigger: ATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCC...TATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCCTTCCCACCCTCCCTaGAGGTGGAAAGCTGATCTG +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAPSHPP*RWKADL
Trigger: CAGATCAGCTTTCCACCTGCAGGGAGGGTGGGAAGG...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCACACTGCAGAAACCCTaGTGTGGCCACAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSTLQKP*CGHKVL
Trigger: AAGGACTTTGTGGCCACAGCAGGGTTTCTGCAGTGT...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTCTGTTGGCAAAACCCTaGTCAGGTCTTCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMALLAKP*SGLHSQ
Trigger: TTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAG...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAATTTACAGGGGAAGCCTaGCCCTCCTCCGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKFTGEA*PSSVLI
Trigger: TATCAGAACGGAGGAGGGCCAGGCTTCCCCTGTAAA...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAACACCCTCCCTGCAGGTaGAAAGCTGATCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKHPPCR*KADLMC
Trigger: ACACATCAGATCAGCTTTCCACCTGCAGGGAGGGTG...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAAGCACAGTGGAGTGGTaGACACACTCTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKSTVEW*THSLES
Trigger: GCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCT...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACAGGAGCAAAGAATGGCTaGCTACGTCATAGATACTAC +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTGAKNG*LRHRYY
Trigger: GTAGTATCTATGACGTAGCCAGCCATTCTTTGCTCC...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTGTTTCAACTTGTAGTTaGCAGCGCCCTGATAAGGTC +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAVSTCS*QRPDKV
Trigger: GACCTTATCAGGGCGCTGTCAACTACAAGTTGAAAC...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp TTTCTCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCAGCCATTATCATCACATaGACCAGGGCAATACACAGG +
Preference number: 4 (lower is better)
Translates to: FLSPYFPASTALAFRCTAAIIIT*TRAIHR
Trigger: CCTGTGTATTGCCCTGGTTCATGTGATGATAATGGC...TGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCACTCATGGGCACTTCTaGCCGTATGAACCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSTHGHF*PYEPSY
Trigger: ATAAGAGGGTTCATACGGGCAGAAGTGCCCATGAGT...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGTGCCATAAGCCCCTCTaGCCATGGCTGATGTCATAT +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRCHKPL*PWLMSY
Trigger: ATATGACATCAGCCATGGCCAGAGGGGCTTATGGCA...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTGCAGAAACCCTGCTGTaGCCACAAAGTCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAAETLL*PQSPSH
Trigger: GTGGGAAGGACTTTGTGGCCACAGCAGGGTTTCTGC...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAAGCACAGTGGAGTGGTaGACACACTCTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKSTVEW*THSLES
Trigger: GCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCT...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACAGAGTTCCATTTCTGCTaGTTTGCTATAATCTCGCCT +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTEFHFC*FAIISP
Trigger: AGGCGAGATTATAGCAAACCAGCAGAAATGGAACTC...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGTGCCTTAGTGCAATGTaGAAATCCACCACACCTTCG +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRCLSAM*KSTTPS
Trigger: CGAAGGTGTGGTGGATTTTCACATTGCACTAAGGCA...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AGATTATTTGCTCTGCCAGTAACATTAGTCATAGGACAGAGGTCTGAGGTCCTGGGCCGTTCACCAGTGTaGAGTCTCCGATGGCTATTG +
Preference number: 4 (lower is better)
Translates to: RLFALPVTLVIGQRSEVLGRSPV*SLRWLL
Trigger: CAATAGCCATCGGAGACTTCACACTGGTGAACGGCC...CAGGACCTCAGACCTCTGTCCTATGACTAATGTTACTGGCAGAGCAAATAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp ACATCCAGTGTTTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACCATACAGGGCGGGAATaGCATCTTCCCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TSSVSVQIMVPAGPGMSYHTGRE*HLPKAS
Trigger: TGAAGCCTTGGGAAGATGTCATTCCCGCCCTGTATG...GTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAAACACTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATCTACAGAAACGTTATaGTCAGAAGGTAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HSGVVDTLFGELQCVVLTSTETL*SEGKSL
Trigger: CAAGGACTTACCTTCTGAGCATAACGTTTCTGTAGA...TGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGCACACAAATGGTTTCTaGCTGGGATGTGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRHTNGF*LGCVVW
Trigger: CCAGACAACACATCCCAGGCAGAAACCATTTGTGTG...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGACTCATGGGCACTTCTaGCCGTATGAACCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRTHGHF*PYEPSY
Trigger: ATAAGAGGGTTCATACGGGCAGAAGTGCCCATGAGT...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GCAAATGAGGTCAAATCTGGATTGACAGTTGTTTCTCTGCCATCCTCCTGTCCCCATGCTGTTCCCACATaGACTGGAGGTTGTCACAAC +
Preference number: 4 (lower is better)
Translates to: ANEVKSGLTVVSLPSSCPHAVPT*TGGCHN
Trigger: GTTGTGACAACCTCCAGTGCATGTGGGAACAGCATG...GGGACAGGAGGATGGCAGAGAAACAACTGTCAATCCAGATTTGACCTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp TCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGCAAACCCTGAATCCTaGACAGCCACATTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: SLEQAVGKTLLRSSQPKAANPES*TATFKG
Trigger: TCCCTTGAATGTGGCTGTGCAGGATTCAGGGTTTGC...AGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTCTGGGATGTGTTGTCTaGTGTTCAGCCAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMALGCVV*CSAKCK
Trigger: TTTGCATTTGGCTGAACACCAGACAACACATCCCAG...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCTTCGTAAGGCCTGTCTaGTTTGTGAACTTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVFVRPV*FVNFQV
Trigger: CACCTGAAAGTTCACAAACCAGACAGGCCTTACGAA...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGTGTGGTGCTGACATaGCTTCTATCACAACCCCAG +
Preference number: 4 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDCVVLT*LLSQPQ
Trigger: CTGGGGTTGTGATAGAAGCCATGTCAGCACCACACA...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTATTCCCTTTAGGGATTaGAAAGAGAGAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMAIPFRD*KERGEV
Trigger: GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAAT...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCTTCACAGCCAAAAGCTaGTCATGTCCATGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVFTAKS*SCPWLN
Trigger: GTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAA...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAATCTGCTTTACAGTATTaGGGAATATGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKSALQY*GIWGTP
Trigger: GGGGGTGCCCCATATTCCCCAATACTGTAAAGCAGA...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTATGACACAGGGACATTaGGTGGTCACGGCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAMTQGH*VVTASS
Trigger: ACTGCTTGCCGTGACCACCCAATGTCCCTGTGTCAT...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR TCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAACCCTCTGGCCATGGCTaGTGTCATATCCACACTGTC +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQPSGHG*CHIHTV
Trigger: GACAGTGTGGATATGACATCAGCCATGGCCAGAGGG...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp TCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTTGCCTTAGTGCAATGTaGAAATCCACCACACCTTCG +
Preference number: 4 (lower is better)
Translates to: SLEQAVGKTLLRSSQPKACLSAM*KSTTPS
Trigger: CGAAGGTGTGGTGGATTTTCACATTGCACTAAGGCA...AGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAAGGCCTGTCTGGTTTGTaGACTTTCAGGTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQGLSGL*TFRCCL
Trigger: GAGGCAGCACCTGAAAGTTCACAAACCAGACAGGCC...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GGTGATGGATACGTTCATTATCATGATTATGGTATTGGTTCCCTGAGTGTACATGGGATCGCGAGTTTCTaGCCAGCCTCTCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDGYVHYHDYGIGSLSVHGIASF*PASRQA
Trigger: AGCCTGACGAGAGGCTGGGCAGAAACTCGCGATCCC...ATGTACACTCAGGGAACCAATACCATAATCATGATAATGAACGTATCCATCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAGAGCCTTTCACATATaGCTCACACACAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASRAFHI*LTHKWF
Trigger: AAACCATTTGTGTGTGAGGCATATGTGAAAGGCTCT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTTTCCGGGGAAGGTTTaGACTGAACTCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDFPGKV*TELRAF
Trigger: AAAGGCTCTGAGTTCAGTGCAAACCTTCCCCGGAAA...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATAGGGTTGTGTACGTTCTaGTGCACCTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LVCLTVKRYLPNAELQGIGLCTF*CTCFRG
Trigger: TCCCCGGAAACAGGTGCAGCAGAACGTACACAACCC...TATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAAGGGTTGTGTACGTTCTaGTGCACCTGTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQGLCTF*CTCFRG
Trigger: TCCCCGGAAACAGGTGCAGCAGAACGTACACAACCC...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp TGTCATCTCTTTCTTCTTGCCTTGGGAGCAAAGAATGGCTGGCTACGTCATAGACTGATGTGTGGTCTCTaGAGGTCTTTACAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CHLFLLALGAKNGWLRHRLMCGL*RSLQGK
Trigger: CTTCCCCTGTAAAGACCTGCAGAGACCACACATCAG...TCTATGACGTAGCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTACACTGCAGAAACCCTaGTGTGGCCACAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QLGLVCLTVKRYLPNAELTLQKP*CGHKVL
Trigger: AAGGACTTTGTGGCCACAGCAGGGTTTCTGCAGTGT...AAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAGGCCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGCTTATCTCTGGTGTGTaGTGTGAACAGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGELISGV*CEQGRS
Trigger: GCTCCTTCCCTGTTCACAGCACACACCAGAGATAAG...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGCTGTTGGCAAAACCCTaGTCAGGTCTTCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGELLAKP*SGLHSQ
Trigger: TTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAG...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp CTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCCATTTCTGCTGGTTTaGTATAATCTCGCCTACTCC +
Preference number: 4 (lower is better)
Translates to: LEQAVGKTLLRSSQPKAGPFLLV*YNLAYS
Trigger: GGAGTAGGCGAGATTATAGCAAACCAGCAGAAATGG...ACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTAACTGGGAAACGATGTaGGACCTGAAAGATATAAGT +
Preference number: 4 (lower is better)
Translates to: SGGHTLWRAAVCGADMASNWETM*DLKDIS
Trigger: ACTTATATCTTTCAGGTCCCACATCGTTTCCCAGTT...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAACCTTTAGATGCCATAAGCCCCTCTaGCCATGGCTGATGTCATAT +
Preference number: 4 (lower is better)
Translates to: GLQMHSTEMVIHKTKTFRCHKPL*PWLMSY
Trigger: ATATGACATCAGCCATGGCCAGAGGGGCTTATGGCA...TCTAAAGGTTTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AGGGCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGTTCGTAAGGCCTGTCTaGTTTGTGAACTTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RAGMTSSQGFRLLLIPFRFVRPV*FVNFQV
Trigger: CACCTGAAAGTTCACAAACCAGACAGGCCTTACGAA...CCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTAGCTGGTCATGTCCATaGCTAAACCAGCCATACAGG +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPASWSCP*LNQPYR
Trigger: CCTGTATGGCTGGTTTAGCCATGGACATGACCAGCT...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAATCTAGAACAAGCTGTTaGCAAAACCCTGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKSRTSC*QNPAQV
Trigger: GACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGA...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCGAGTGGATTTGTTATTaGAGGCATCCCCAGATTCAC +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVEWICY*RHPQIH
Trigger: GTGAATCTGGGGATGCCTTCAATAACAAATCCACTC...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTCACAACCCCAGCAGTaGAAAAACGCTGATAAACTC +
Preference number: 4 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDSQPQQ*KNADKL
Trigger: GAGTTTATCAGCGTTTTTTCACTGCTGGGGTTGTGA...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR TCA 90 bp ACATTCAAGGGAGCATTCACGGATGCACATTTAGCAGAGTTCCATTTCTGCTGGGAATGTAAAGGGGCATaGGGTAGCTTTGCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TFKGAFTDAHLAEFHFCWECKGA*GSFAGD
Trigger: ATCACCTGCAAAGCTACCTCATGCCCCTTTACATTC...CCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp GGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAACCTTTAGACAGAAGGTAAGTCCTTaGCCTCTGTTCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLQMHSTEMVIHKTKTFRQKVSP*PLFHGK
Trigger: TTTGCCATGGAACAGAGGGCAAGGACTTACCTTCTG...TCTAAAGGTTTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTTTTCCGGGGAAGGTTTaGACTGAACTCAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAFPGKV*TELRAF
Trigger: AAAGGCTCTGAGTTCAGTGCAAACCTTCCCCGGAAA...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp ATTCAAGGGAGCATTCACGGATGCACATTTAGCAGAGTTCCATTTCTGCTGGTTCTTATCTCTGGTGTGTaGTGTGAACAGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: IQGSIHGCTFSRVPFLLVLISGV*CEQGRS
Trigger: GCTCCTTCCCTGTTCACAGCACACACCAGAGATAAG...AACCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AACATGAAGGCTGGACAAATCCTTCACAGGCATAACATGAGACCAACAATGTCCAAGGGACCCAATTCATaGTGTTCCCACATGCACTGG +
Preference number: 4 (lower is better)
Translates to: NMKAGQILHRHNMRPTMSKGPNS*CSHMHW
Trigger: CCAGTGCATGTGGGAACAGCATGAATTGGGTCCCTT...GGACATTGTTGGTCTCATGTTATGCCTGTGAAGGATTTGTCCAGCCTTCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCAACTGGGAAACGATGTaGGACCTGAAAGATATAAGT +
Preference number: 4 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSNWETM*DLKDIS
Trigger: ACTTATATCTTTCAGGTCCCACATCGTTTCCCAGTT...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGCAGAACTGTCAGATCTaGATAATCACCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGEQNCQI*IITQEG
Trigger: TCCCTCCTGGGTGATTATCCAGATCTGACAGTTCTG...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR TCA 90 bp CTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATGCAGTGTGTGGTGCTaGCATGGCTTCTATCACAAC +
Preference number: 4 (lower is better)
Translates to: LVCLTVKRYLPNAELQGICSVWC*HGFYHN
Trigger: GTTGTGATAGAAGCCATGTCAGCACCACACACTGCA...TATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp TTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATGGCTCCTTGGCAGGTAGGTCAAATCTGGATTaGCAGTTGTTTCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LRDTCLMLNFRAYGSLAGRSNLD*QLFLCH
Trigger: ATGGCAGAGAAACAACTGTCAATCCAGATTTGACCT...ACCTGCCAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp AACATGAAGGCTGGACAAATCCTTCACAGGCATAACATGAGACCAACAATGTCCCACACAAATGGTTTCTaGCTGGGATGTGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: NMKAGQILHRHNMRPTMSHTNGF*LGCVVW
Trigger: CCAGACAACACATCCCAGGCAGAAACCATTTGTGTG...GGACATTGTTGGTCTCATGTTATGCCTGTGAAGGATTTGTCCAGCCTTCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAATTGCCCTCTGTTCCATaGCAAAAATCAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQLPSVP*QKSEPG
Trigger: GCCTGGCTCTGATTTTTGCCATGGAACAGAGGGCAA...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGCCCAGGGTGGGTACTTaGATGAACAAGTTTCAACTT +
Preference number: 4 (lower is better)
Translates to: QGFRLLLIPFRDWKERGEPRVGT*MNKFQL
Trigger: AAGTTGAAACTTGTTCATCCAAGTACCCACCCTGGG...CTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTTTCACAGCCAAAAGCTaGTCATGTCCATGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAFTAKS*SCPWLN
Trigger: GTTTAGCCATGGACATGACCAGCTTTTGGCTGTGAA...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCACAGTGATCAGAACATaGAAGACTAAAGGCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVTVIRT*KTKGGF
Trigger: AAAGCCGCCTTTAGTCTTCCATGTTCTGATCACTGT...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTAACCACATCAGTGATTaGAATTCCTGGCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: CPRKRETFSRTSCWQNPANHISD*NSWHSQ
Trigger: CTGACTGTGCCAGGAATTCCAATCACTGATGTGGTT...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR TCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATGTTTCAACTTGTAGTTaGCAGCGCCCTGATAAGGTC +
Preference number: 4 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDVSTCS*QRPDKV
Trigger: GACCTTATCAGGGCGCTGTCAACTACAAGTTGAAAC...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp GGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAACCTTTAGATTGTGTAGAGTAACATaGAGGCTGGACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: GLQMHSTEMVIHKTKTFRLCRVT*RLDKSF
Trigger: GAAGGATTTGTCCAGCCTTCATGTTACTCTACACAA...TCTAAAGGTTTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAATTGGCAACCCTATATTaGCTCTGTCATCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKLATLY*LCHLFL
Trigger: AAGAAAGAGATGACAGAGTCAATATAGGGTTGCCAA...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR GCA 90 bp GGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGAAAGAGAGAGGAGAGGTCTCTACAGAAACGTTATaGTCAGAAGGTAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GFRLLLIPFRDWKERGEVSTETL*SEGKSL
Trigger: CAAGGACTTACCTTCTGAGCATAACGTTTCTGTAGA...GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp TCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTAGAGCCTTTCACATATaGCTCACACACAAATGGTTT +
Preference number: 4 (lower is better)
Translates to: SLEQAVGKTLLRSSQPKARAFHI*LTHKWF
Trigger: AAACCATTTGTGTGTGAGGCATATGTGAAAGGCTCT...AGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR GCA 90 bp ACATTCAAGGGAGCATTCACGGATGCACATTTAGCAGAGTTCCATTTCTGCTGGGCAGAGTTCCATTTCTaGTGGTTTGCTATAATCTCG +
Preference number: 4 (lower is better)
Translates to: TFKGAFTDAHLAEFHFCWAEFHF*WFAIIS
Trigger: CGAGATTATAGCAAACCAGCAGAAATGGAACTCTGC...CCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp GGTGATGGATACGTTCATTATCATGATTATGGTATTGGTTCCCTGAGTGTACATGGTGGACACACTCTTTaGAGAGCTGCAGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GDGYVHYHDYGIGSLSVHGGHTL*RAAVCG
Trigger: ACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC...ATGTACACTCAGGGAACCAATACCATAATCATGATAATGAACGTATCCATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AGATTATTTGCTCTGCCAGTAACATTAGTCATAGGACAGAGGTCTGAGGTCCTGATTCCCTTTAGGGATTaGAAAGAGAGAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RLFALPVTLVIGQRSEVLIPFRD*KERGEV
Trigger: GACCTCTCCTCTCTCTTTCCAATCCCTAAAGGGAAT...CAGGACCTCAGACCTCTGTCCTATGACTAATGTTACTGGCAGAGCAAATAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATTCTTTCTTCTTGCCTTaGGAGCAAAGAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDSFFLP*EQRMAG
Trigger: GCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGA...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATAATTTCTGCAAACCCTaGATCCTGCACAGCCACATT +
Preference number: 4 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDNFCKP*ILHSHI
Trigger: AATGTGGCTGTGCAGGATTCAGGGTTTGCAGAAATT...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAACTGGGATGTGTTGTCTaGTGTTCAGCCAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQLGCVV*CSAKCK
Trigger: TTTGCATTTGGCTGAACACCAGACAACACATCCCAG...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp CTGGTATGTCTTACAGTTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATACCCAGGGTGGGTACTTaGATGAACAAGTTTCAACTT +
Preference number: 4 (lower is better)
Translates to: LVCLTVKRYLPNAELQGIPRVGT*MNKFQL
Trigger: AAGTTGAAACTTGTTCATCCAAGTACCCACCCTGGG...TATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAACTGTAAGACATACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR TCA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAATTGTGTAGAGTAACATaGAGGCTGGACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQLCRVT*RLDKSF
Trigger: GAAGGATTTGTCCAGCCTTCATGTTACTCTACACAA...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CCA 90 bp TTCTGTACAAATTATGGTCCCAGCTGGGCCTGGTATGTCTTACAGTTAAGAGATTTAGAAAATCCGATTTaGCAACCCTATATTGACTCT +
Preference number: 4 (lower is better)
Translates to: FCTNYGPSWAWYVLQLRDLENPI*QPYIDS
Trigger: AGAGTCAATATAGGGTTGCCAAATCGGATTTTCTAA...ATCTCTTAACTGTAAGACATACCAGGCCCAGCTGGGACCATAATTTGTACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 90 bp CCCCACCGTGGCGGCCGGGAGAGTTGCCCTCTCCCGTACTGTCATTaGCCTGGCGCCAGCCGCTGGTGCACAGGCAGGGCCTGGGGATCG +
Preference number: 5 (lower is better)
Translates to: PHRGGRESCPLPYCH*PGASRWCTGRAWGS
Trigger: CGATCCCCAGGCCCTGCCTGTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 90 bp TGCAGTGCAGGAAGTTCCGGCCCCCACCGTGGCGGCCGGGAGAGTTaGCCTCTCCCGTACTGTCATTGGCCTGGCGCCAGCCGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: CSAGSSGPHRGGRES*PLPYCHWPGASRWC
Trigger: GCACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAACTTCCTGCACTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 90 bp AGTTGCCCTCTCCCGTACTGTCATTGGCCTGGCGCCAGCCGCTGGTaGACAGGCAGGGCCTGGGGATCGCGAGTTTCTGCCCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SCPLPYCHWPGASRW*TGRAWGSRVSAQPL
Trigger: GAGAGGCTGGGCAGAAACTCGCGATCCCCAGGCCCTGCCTGTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 90 bp TACTGTCATTGGCCTGGCGCCAGCCGCTGGTGCACAGGCAGGGCCTaGGGATCGCGAGTTTCTGCCCAGCCTCTCGTCAGGCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: YCHWPGASRWCTGRA*GSRVSAQPLVRLRV
Trigger: GACCCTCAGCCTGACGAGAGGCTGGGCAGAAACTCGCGATCCCCAGGCCCTGCCTGTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 90 bp GAGAGTTGCCCTCTCCCGTACTGTCATTGGCCTGGCGCCAGCCGCTaGTGCACAGGCAGGGCCTGGGGATCGCGAGTTTCTGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: ESCPLPYCHWPGASR*CTGRAWGSRVSAQP
Trigger: AGGCTGGGCAGAAACTCGCGATCCCCAGGCCCTGCCTGTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCCGCTGGGTACCCCCGTaGCAAGGGGTCACGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GGHTLWRAAVCGADMASIRWVPP*QGVTAG
Trigger: ACCAGCCGTGACCCCTTGCAACGGGGGTACCCAGCG...GATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCTTCTCCCGTACTGTCATaGGCCTGGCGCCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LAKPCSGLHSQKLVMSMASPVLS*AWRQPL
Trigger: CAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGA...AGCCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGCACATGCACTGGAGGTaGTCACAACTGCCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLHMHWR*SQLPPP
Trigger: AGGAGGGGGCAGTTGTGACAACCTCCAGTGCATGTG...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGTGGTGGACACACTCTTaGGAGAGCTGCAGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLWWTHS*ESCSVW
Trigger: CCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCA...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS TCA 90 bp AAGGCATCCCCAGATTCACAGCACTTGTTATGCCTTAGTGCAATGTaGAAATCCACCACACCTTCGGTGGCCTCGTGCGGCTCCCCATCG +
Preference number: 5 (lower is better)
Translates to: KASPDSQHLLCLSAM*KSTTPSVASCGSPS
Trigger: CGATGGGGAGCCGCACGAGGCCACCGAAGGTGTGGTGGATTTTCACATTGCACTAAGGCATAACAAGTGCTGTGAATCTGGGGATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGTCTGCCTGGGATGTGTaGTCTGGTGTTCAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: EHSGVVDTLFGELQCVVLSAWDV*SGVQPN
Trigger: ATTTGGCTGAACACCAGACAACACATCCCAGGCAGA...CAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp AGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTTATGACACAGGGACATaGGGTGGTCACGGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SGGHTLWRAAVCGADMASYDTGT*GGHGKQ
Trigger: CTGCTTGCCGTGACCACCCAATGTCCCTGTGTCATA...AGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR CAA 90 bp AGATTATTTGCTCTGCCAGTAACATTAGTCATAGGACAGAGGTCTGAGGTCCTGTGGCGGCCGGGAGAGTaGCCCTCTCCCGTACTGTCA +
Preference number: 5 (lower is better)
Translates to: RLFALPVTLVIGQRSEVLWRPGE*PSPVLS
Trigger: TGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCA...CAGGACCTCAGACCTCTGTCCTATGACTAATGTTACTGGCAGAGCAAATAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp ACATTCAAGGGAGCATTCACGGATGCACATTTAGCAGAGTTCCATTTCTGCTGGTCTGGGGGCACAGAGTaGCCTCGGGACTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: TFKGAFTDAHLAEFHFCWSGGTE*PRDSCP
Trigger: AGGACAGGAGTCCCGAGGCAACTCTGTGCCCCCAGA...CCAGCAGAAATGGAACTCTGCTAAATGTGCATCCGTGAATGCTCCCTTGAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTTCTGGGGGCACAGAGTaGCCTCGGGACTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: CPRKRETFSRTSCWQNPASGGTE*PRDSCP
Trigger: AGGACAGGAGTCCCGAGGCAACTCTGTGCCCCCAGA...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCATCCGTTCTGATAGGGTaGTGTACGTTCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSSVLIG*CTFCCT
Trigger: GGTGCAGCAGAACGTACACAACCCTATCAGAACGGA...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 90 bp CCAACACAGCTAGCATTCCTAGGGAACCTCCCCAGGGTGGGTACTTaGATGAACAAGTTTCAACTTGTAGTTGACAGCGCCCTGATAAGG +
Preference number: 5 (lower is better)
Translates to: PTQLAFLGNLPRVGT*MNKFQLVVDSALIR
Trigger: CCTTATCAGGGCGCTGTCAACTACAAGTTGAAACTTGTTCATCCAAGTACCCACCCTGGGGAGGTTCCCTAGGAATGCTAGCTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp AAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCTCAGAAGGTAAGTCCTaGCCCTCTGTTCCATGGCAA +
Preference number: 5 (lower is better)
Translates to: KLLAKPCSGLHSQKLVMSSEGKS*PSVPWQ
Trigger: TTGCCATGGAACAGAGGGCAAGGACTTACCTTCTGA...GGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGCTGACATGGCTTCTATCATCTGCCTGGGATGTGTaGTCTGGTGTTCAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: VDTLFGELQCVVLTWLLSSAWDV*SGVQPN
Trigger: ATTTGGCTGAACACCAGACAACACATCCCAGGCAGA...TGATAGAAGCCATGTCAGCACCACACACTGCAGCTCTCCAAAGAGTGTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp CACAGCACTGGCCTTCAGATGCACAGCACGGAGATGGTAATCCACAAAACCAAAGTGAACTTTCTGGTGTaGAGTGAGGTCAGCGGCGTA +
Preference number: 5 (lower is better)
Translates to: HSTGLQMHSTEMVIHKTKVNFLV*SEVSGV
Trigger: TACGCCGCTGACCTCACTCAACACCAGAAAGTTCAC...TTTGGTTTTGTGGATTACCATCTCCGTGCTGTGCATCTGAAGGCCAGTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCATGGCCCCAGGGTGGGTACTaGGATGAACAAGTTTCAACT +
Preference number: 5 (lower is better)
Translates to: CWQNPAQVFTAKSWSCPWPQGGY*DEQVST
Trigger: AGTTGAAACTTGTTCATCCAAGTACCCACCCTGGGG...CCATGGACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTGGTGGACACACTCTTaGGAGAGCTGCAGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDWWTHS*ESCSVW
Trigger: CCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCA...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp CAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTCATGTCCTCTTTCTTCTTGCCTaGGGAGCAAAGAATGGCTGG +
Preference number: 5 (lower is better)
Translates to: QAVGKTLLRSSQPKAGHVLFLLA*GAKNGW
Trigger: CCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAG...GACATGACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATCCAGCACCTGCCCAGTaGAACTACCCCATGATAGAC +
Preference number: 5 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDPAPAQ*NYPMID
Trigger: GTCTATCATGGGGTAGTTCAACTGGGCAGGTGCTGG...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS TCA 90 bp CCTCCCCAGGGTGGGTACTTGGATGAACAAGTTTCAACTTGTAGTTaGCAGCGCCCTGATAAGGTCTGTTCTCAGAGCTTATCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: PPQGGYLDEQVSTCS*QRPDKVCSQSLSLV
Trigger: CACCAGAGATAAGCTCTGAGAACAGACCTTATCAGGGCGCTGTCAACTACAAGTTGAAACTTGTTCATCCAAGTACCCACCCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS TCA 90 bp CAGTTGAACTACCCCATGATAGACTACAAGACAGGAAGCTCCGTATaGCACAGGGACATTGGGTGGTCACGGCAAGCAGTAACCACATCA +
Preference number: 5 (lower is better)
Translates to: QLNYPMIDYKTGSSV*HRDIGWSRQAVTTS
Trigger: TGATGTGGTTACTGCTTGCCGTGACCACCCAATGTCCCTGTGTCATACGGAGCTTCCTGTCTTGTAGTCTATCATGGGGTAGTTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR CAA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATTCCGTTCTGATAGGGTaGTGTACGTTCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDSVLIG*CTFCCT
Trigger: GGTGCAGCAGAACGTACACAACCCTATCAGAACGGA...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp TTCTCAGTCCCTATTTTCCTGCCAGCACAGCACTGGCCTTCAGATGCACAGCACCCAGATTCACAGCACTaGTTATGCCTTAGTGCAATG +
Preference number: 5 (lower is better)
Translates to: FSVPIFLPAQHWPSDAQHPDSQH*LCLSAM
Trigger: CATTGCACTAAGGCATAACAAGTGCTGTGAATCTGG...GTGCTGTGCATCTGAAGGCCAGTGCTGTGCTGGCAGGAAAATAGGGACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATGTGAACTTTCTGGTGTaGAGTGAGGTCAGCGGCGTA +
Preference number: 5 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDVNFLV*SEVSGV
Trigger: TACGCCGCTGACCTCACTCAACACCAGAAAGTTCAC...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp CCTGAGCACAGTGGAGTGGTGGACACACTCTTTGGAGAGCTGCAGTGTGTGGTGGTAAGAGAATGTAACTaGTCTCCAGAAAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PEHSGVVDTLFGELQCVVVRECN*SPESFQ
Trigger: TTGGAAGCTTTCTGGAGACAAGTTACATTCTCTTAC...CACCACACACTGCAGCTCTCCAAAGAGTGTGTCCACCACTCCACTGTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp CTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGCTGGTATCTGCTTTACAGTATaGGGGAATATGGGGCACCCC +
Preference number: 5 (lower is better)
Translates to: LEQAVGKTLLRSSQPKAGICFTV*GNMGHP
Trigger: GGGGTGCCCCATATTCCCCAATACTGTAAAGCAGAT...ACCAGCTTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 90 bp CATGATAGACTACAAGACAGGAAGCTCCGTATGACACAGGGACATTaGGTGGTCACGGCAAGCAGTAACCACATCAGTGATTGGAATTCC +
Preference number: 5 (lower is better)
Translates to: HDRLQDRKLRMTQGH*VVTASSNHISDWNS
Trigger: GGAATTCCAATCACTGATGTGGTTACTGCTTGCCGTGACCACCCAATGTCCCTGTGTCATACGGAGCTTCCTGTCTTGTAGTCTATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS-3UTR CAA 90 bp TGTCATCTCTTTCTTCTTGCCTTGGGAGCAAAGAATGGCTGGCTACGTCATAGAAGGGCATATGGCTCCTaGGCAGGTGCTAAACAGCAT +
Preference number: 5 (lower is better)
Translates to: CHLFLLALGAKNGWLRHRRAYGS*AGAKQH
Trigger: ATGCTGTTTAGCACCTGCCAAGGAGCCATATGCCCT...TCTATGACGTAGCCAGCCATTCTTTGCTCCCAAGGCAAGAAGAAAGAGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTTCAGAAGGTAAGTCCTaGCCCTCTGTTCCATGGCAA +
Preference number: 5 (lower is better)
Translates to: CPRKRETFSRTSCWQNPASEGKS*PSVPWQ
Trigger: TTGCCATGGAACAGAGGGCAAGGACTTACCTTCTGA...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GCAAATGAGGTCAAATCTGGATTGACAGTTGTTTCTCTGCCATCCTCCTGTCCCGGAGACCCCTTCAGTTaGGTAGATCTTAACTCTGCT +
Preference number: 5 (lower is better)
Translates to: ANEVKSGLTVVSLPSSCPGDPFS*VDLNSA
Trigger: AGCAGAGTTAAGATCTACCAAACTGAAGGGGTCTCC...GGGACAGGAGGATGGCAGAGAAACAACTGTCAATCCAGATTTGACCTCATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCCAGATTCACAGCACTaGTTATGCCTTAGTGCAATG +
Preference number: 5 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAPDSQH*LCLSAM
Trigger: CATTGCACTAAGGCATAACAAGTGCTGTGAATCTGG...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp GCAAATGAGGTCAAATCTGGATTGACAGTTGTTTCTCTGCCATCCTCCTGTCCCAGAGTGGATTTGTTATaGAAGGCATCCCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: ANEVKSGLTVVSLPSSCPRVDLL*KASPDS
Trigger: TGAATCTGGGGATGCCTTCAATAACAAATCCACTCT...GGGACAGGAGGATGGCAGAGAAACAACTGTCAATCCAGATTTGACCTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp GCGGGAATGACATCTTCCCAAGGCTTCAGACTACTCCTAATTCCCTTTAGGGATAGAGTGGATTTGTTATaGAAGGCATCCCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: AGMTSSQGFRLLLIPFRDRVDLL*KASPDS
Trigger: TGAATCTGGGGATGCCTTCAATAACAAATCCACTCT...ATCCCTAAAGGGAATTAGGAGTAGTCTGAAGCCTTGGGAAGATGTCATTCCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAACCCCAGGGTGGGTACTaGGATGAACAAGTTTCAACT +
Preference number: 5 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQPQGGY*DEQVST
Trigger: AGTTGAAACTTGTTCATCCAAGTACCCACCCTGGGG...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp TGTCCCAGAAAAAGGGAAACCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTGAGGTCAAATCTGGATaGACAGTTGTTTCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: CPRKRETFSRTSCWQNPAEVKSG*TVVSLP
Trigger: TGGCAGAGAAACAACTGTCAATCCAGATTTGACCTC...AGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGGTTTCCCTTTTTCTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp TTAAGAGATACCTGCCTAATGCTGAACTTCAGGGCATATGGCTCCTTGGCAGGTTTAATTAGGCTGGAGTaGCAGTTGAAAGATTTCCCA +
Preference number: 5 (lower is better)
Translates to: LRDTCLMLNFRAYGSLAGLIRLE*QLKDFP
Trigger: TGGGAAATCTTTCAACTGCAACTCCAGCCTAATTAA...ACCTGCCAAGGAGCCATATGCCCTGAAGTTCAGCATTAGGCAGGTATCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS-3UTR CAA 90 bp CCTTCTCTAGAACAAGCTGTTGGCAAAACCCTGCTCAGGTCTTCACAGCCAAAAGTAAGAGAATGTAACTaGTCTCCAGAAAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PSLEQAVGKTLLRSSQPKVRECN*SPESFQ
Trigger: TTGGAAGCTTTCTGGAGACAAGTTACATTCTCTTAC...TTTTGGCTGTGAAGACCTGAGCAGGGTTTTGCCAACAGCTTGTTCTAGAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS-3UTR CAA 90 bp AAGACTAAAGGCGGCTTTATCATAAGGCCATTATCATCACATGAACCAGGGCAATTAATTAGGCTGGAGTaGCAGTTGAAAGATTTCCCA +
Preference number: 5 (lower is better)
Translates to: KTKGGFIIRPLSSHEPGQLIRLE*QLKDFP
Trigger: TGGGAAATCTTTCAACTGCAACTCCAGCCTAATTAA...TTGCCCTGGTTCATGTGATGATAATGGCCTTATGATAAAGCCGCCTTTAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS GCA 72 bp GCGCCGAGAGCGCGCAGCTCCGCTGGGTACCCCCGTTaGAAGGGGTCACGGCTGGTGCAAAGGCGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: APRARSSAGYPR*KGSRLVQRRGG
Trigger: CCCTCCGCGCCTTTGCACCAGCCGTGACCCCTTGCAACGGGGGTACCCAGCGGAGCTGCGCGCTCTCGGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CAA 72 bp GGCGCCGAGAGCGCGCAGCTCCGCTGGGTACCCCCGTaGCAAGGGGTCACGGCTGGTGCAAAGGCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: GAESAQLRWVPP*QGVTAGAKARR
Trigger: CCTCCGCGCCTTTGCACCAGCCGTGACCCCTTGCAACGGGGGTACCCAGCGGAGCTGCGCGCTCTCGGCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 72 bp GGCGGCCGGGAGAGTTGCCCTCTCCCGTACTGTCATTaGCCTGGCGCCAGCCGCTGGTGCACAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GGRESCPLPYCH*PGASRWCTGRA
Trigger: GGCCCTGCCTGTGCACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 72 bp GGAAGTTCCGGCCCCCACCGTGGCGGCCGGGAGAGTTaGCCTCTCCCGTACTGTCATTGGCCTGGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: GSSGPHRGGRES*PLPYCHWPGAS
Trigger: GCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAACTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 72 bp GACTCAGCCTCCCCGCCGGGAAATGACCTGCGAGGCTaGAGTGCAGGAAGTTCCGGCCCCCACCGTGGCGGC +
Preference number: 6 (lower is better)
Translates to: DSASPPGNDLRG*SAGSSGPHRGG
Trigger: GCCGCCACGGTGGGGGCCGGAACTTCCTGCACTGCAGCCTCGCAGGTCATTTCCCGGCGGGGAGGCTGAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CAA 90 bp CTGCAGTGCAGGAAGTTCCGGCCCCCACCGTGGCGGCCGGGAGAGTaGCCCTCTCCCGTACTGTCATTGGCCTGGCGCCAGCCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LQCRKFRPPPWRPGE*PSPVLSLAWRQPLV
Trigger: CACCAGCGGCTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAACTTCCTGCACTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS TCA 72 bp GGCTACCACCCACCTGGCCGTGCCCCAGACGAGGTGTaGCCCCGGGCTGAGGGTCGCACTCCTAGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: GYHPPGRAPDEV*PRAEGRTPSLS
Trigger: ACTGAGGCTAGGAGTGCGACCCTCAGCCCGGGGTCACACCTCGTCTGGGGCACGGCCAGGTGGGTGGTAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 72 bp CTGGTGCACAGGCAGGGCCTGGGGATCGCGAGTTTCTaGCCAGCCTCTCGTCAGGCTGAGGGTCCAGGGCGG +
Preference number: 6 (lower is better)
Translates to: LVHRQGLGIASF*PASRQAEGPGR
Trigger: CCGCCCTGGACCCTCAGCCTGACGAGAGGCTGGGCAGAAACTCGCGATCCCCAGGCCCTGCCTGTGCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 72 bp GCGAGGCTGCAGTGCAGGAAGTTCCGGCCCCCACCGTaGCGGCCGGGAGAGTTGCCCTCTCCCGTACTGTCA +
Preference number: 6 (lower is better)
Translates to: ARLQCRKFRPPP*RPGELPSPVLS
Trigger: TGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAACTTCCTGCACTGCAGCCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CAA 72 bp AGGAAGTTCCGGCCCCCACCGTGGCGGCCGGGAGAGTaGCCCTCTCCCGTACTGTCATTGGCCTGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: RKFRPPPWRPGE*PSPVLSLAWRQ
Trigger: CTGGCGCCAGGCCAATGACAGTACGGGAGAGGGCAACTCTCCCGGCCGCCACGGTGGGGGCCGGAACTTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS GCA 72 bp CCCATCGCTGGGAGTGACCTCACACTGCAGAAACCCTaGTGTGGCCACAAAGTCCTTCCCACCCTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: PIAGSDLTLQKP*CGHKVLPTLPA
Trigger: TGCAGGGAGGGTGGGAAGGACTTTGTGGCCACAGCAGGGTTTCTGCAGTGTGAGGTCACTCCCAGCGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 72 bp GGTAGTCACACAGCTAACCGCAAGACCCCTCATGCCTaGAGCTTCCCTGCAAGGCTTCAGGCAGCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: GSHTANRKTPHA*SFPARLQAAGV
Trigger: CACACCTGCTGCCTGAAGCCTTGCAGGGAAGCTCCAGGCATGAGGGGTCTTGCGGTTAGCTGTGTGACTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS CAA 72 bp ACAGGGGAAGCCTGGCCCTCCTCCGTTCTGATAGGGTaGTGTACGTTCTGCTGCACCTGTTTCCGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: TGEAWPSSVLIG*CTFCCTCFRGR
Trigger: CCTTCCCCGGAAACAGGTGCAGCAGAACGTACACAACCCTATCAGAACGGAGGAGGGCCAGGCTTCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 72 bp AAACGTAGGCCACATATGTCACAGGGGCAGGTCTTCTaGGGGCACAGAGTTGCCTCGGGACTCCTGTCCTGT +
Preference number: 6 (lower is better)
Translates to: KRRPHMSQGQVF*GHRVASGLLSC
Trigger: ACAGGACAGGAGTCCCGAGGCAACTCTGTGCCCCCAGAAGACCTGCCCCTGTGACATATGTGGCCTACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 72 bp GGCAAAAATCAGAGCCAGGCCTGCCATAAGCCCCTCTaGCCATGGCTGATGTCATATCCACACTGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: GKNQSQACHKPL*PWLMSYPHCQA
Trigger: TGCCTGACAGTGTGGATATGACATCAGCCATGGCCAGAGGGGCTTATGGCAGGCCTGGCTCTGATTTTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 72 bp GATGTGTGGTCTCTGCAGGTCTTTACAGGGGAAGCCTaGCCCTCCTCCGTTCTGATAGGGTTGTGTACGTTC +
Preference number: 6 (lower is better)
Translates to: DVWSLQVFTGEA*PSSVLIGLCTF
Trigger: GAACGTACACAACCCTATCAGAACGGAGGAGGGCCAGGCTTCCCCTGTAAAGACCTGCAGAGACCACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS TCA 72 bp CCAGATTCACAGCACTTGTTATGCCTTAGTGCAATGTaGAAATCCACCACACCTTCGGTGGCCTCGTGCGGC +
Preference number: 6 (lower is better)
Translates to: PDSQHLLCLSAM*KSTTPSVASCG
Trigger: GCCGCACGAGGCCACCGAAGGTGTGGTGGATTTTCACATTGCACTAAGGCATAACAAGTGCTGTGAATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS TCA 72 bp TACCCCATGATAGACTACAAGACAGGAAGCTCCGTATaGCACAGGGACATTGGGTGGTCACGGCAAGCAGTA +
Preference number: 6 (lower is better)
Translates to: YPMIDYKTGSSV*HRDIGWSRQAV
Trigger: TACTGCTTGCCGTGACCACCCAATGTCCCTGTGTCATACGGAGCTTCCTGTCTTGTAGTCTATCATGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS CCA 72 bp CAGGGCTCTTTCCCCATCTCCAACTGGGAAACGATGTaGGACCTGAAAGATATAAGTCCCAGCGAGGCTATA +
Preference number: 6 (lower is better)
Translates to: QGSFPISNWETM*DLKDISPSEAI
Trigger: TATAGCCTCGCTGGGACTTATATCTTTCAGGTCCCACATCGTTTCCCAGTTGGAGATGGGGAAAGAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404801.2
CDS CCA 72 bp CTACAAGACAGGAAGCTCCGTATGACACAGGGACATTaGGTGGTCACGGCAAGCAGTAACCACATCAGTGAT +
Preference number: 6 (lower is better)
Translates to: LQDRKLRMTQGH*VVTASSNHISD
Trigger: ATCACTGATGTGGTTACTGCTTGCCGTGACCACCCAATGTCCCTGTGTCATACGGAGCTTCCTGTCTTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS GCA 72 bp GAGCCTTTCACATATGCCTCACACACAAATGGTTTCTaGCTGGGATGTGTTGTCTGGTGTTCAGCCAAATGC +
Preference number: 6 (lower is better)
Translates to: EPFTYASHTNGF*LGCVVWCSAKC
Trigger: GCATTTGGCTGAACACCAGACAACACATCCCAGGCAGAAACCATTTGTGTGTGAGGCATATGTGAAAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1
CDS CCA 72 bp AAAGGCACAGAATCTAAACCACAGAACTGTCAGATCTaGATAATCACCCAGGAGGGAATGGCCGAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: KGTESKPQNCQI*IITQEGMAESE
Trigger: CTCTGACTCGGCCATTCCCTCCTGGGTGATTATCCAGATCTGACAGTTCTGTGGTTTAGATTCTGTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605484.1
CDS TCA 72 bp GGTGGGTACTTGGATGAACAAGTTTCAACTTGTAGTTaGCAGCGCCCTGATAAGGTCTGTTCTCAGAGCTTA +
Preference number: 6 (lower is better)
Translates to: GGYLDEQVSTCS*QRPDKVCSQSL
Trigger: TAAGCTCTGAGAACAGACCTTATCAGGGCGCTGTCAACTACAAGTTGAAACTTGTTCATCCAAGTACCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404801.2
ENST00000605484.1