RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF79 (Homo sapiens)

Ensembl gene IDs: ENSG00000196152

Ensembl transcript IDs: ENST00000342483.5, ENST00000543471.5, ENST00000612342.4, ENST00000617266.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTTTCAAGCCTTTAGCATTTCTCAGATCCTCACCCACCTGTCCTaGGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCTA +
Preference number: 1 (lower is better)
Translates to: CFQAFSISQILTHLS*VGMSGTLSTSTMFL
Trigger: TAGGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAAATGCTAAAGGCTTGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
3UTR GCA 90 bp TGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATaGTTTCAAGCCTTTAGCATTTCTCAGATCCTCACCCACCTGTCC +
Preference number: 1 (lower is better)
Translates to: CMWLWAADSKLDVFR*FQAFSISQILTHLS
Trigger: GGACAGGTGGGTGAGGATCTGAGAAATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
3UTR-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCTCACCCACCTGTCCTaGGTCGGCATGTCCGGGACT +
Preference number: 2 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCLTHLS*VGMSGT
Trigger: AGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
3UTR-3UTR TCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCTCACCCACCTGTCCTaGGTCGGCATGTCCGGGACT +
Preference number: 2 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFLTHLS*VGMSGT
Trigger: AGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
3UTR-3UTR TCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTACTCACCCACCTGTCCTaGGTCGGCATGTCCGGGACT +
Preference number: 2 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLLTHLS*VGMSGT
Trigger: AGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAG...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
3UTR CCA 72 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTaGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGC +
Preference number: 3 (lower is better)
Translates to: SGCLLKVFCMWL*AADSKLDVFRC
Trigger: GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTCTGCAGGGCTGCTCTaGCGGCTCCCAGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHSAGLL*RLPGRT
Trigger: AGTCCGGCCTGGGAGCCGTCAGAGCAGCCCTGCAGA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTCTGCAGGGCTGCTCTaGCGGCTCCCAGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFSAGLL*RLPGRT
Trigger: AGTCCGGCCTGGGAGCCGTCAGAGCAGCCCTGCAGA...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCTCTGCAGGGCTGCTCTaGCGGCTCCCAGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSSAGLL*RLPGRT
Trigger: AGTCCGGCCTGGGAGCCGTCAGAGCAGCCCTGCAGA...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFGAVRA*PAGCST
Trigger: AGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCC...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCCCCGTTCTGCAGGGCTaGTCTGACGGCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFPVLQG*SDGSQA
Trigger: GGCCTGGGAGCCGTCAGAGCAGCCCTGCAGAACGGG...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCCCCGTTCTGCAGGGCTaGTCTGACGGCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSPVLQG*SDGSQA
Trigger: GGCCTGGGAGCCGTCAGAGCAGCCCTGCAGAACGGG...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCCCGTTCTGCAGGGCTaGTCTGACGGCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHPVLQG*SDGSQA
Trigger: GGCCTGGGAGCCGTCAGAGCAGCCCTGCAGAACGGG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCGCCCCCACCCCGTTCTaGAGGGCTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFAPTPF*RAALTA
Trigger: AGCCGTCAGAGCAGCCCTGCAGAACGGGGTGGGGGC...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGCCCCCACCCCGTTCTaGAGGGCTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHAPTPF*RAALTA
Trigger: AGCCGTCAGAGCAGCCCTGCAGAACGGGGTGGGGGC...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCCCCAACGCCAGGTCCTaGCTCCAGCGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSPNARS*LQRQRD
Trigger: GTCCCTCTGGCGCTGGAGCCAGGACCTGGCGTTGGG...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCTGATCCTGCGGTGCTaGGTCGCGGGAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHLILRC*VAGAVR
Trigger: CCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCCCTTCCTCCAGCATTTaGGTCCCGCCTCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFPSSSI*VPPRAT
Trigger: TGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGG...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATACTGGTCCCGTGGTCTaGATCCCCAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHTGPVV*IPRGHL
Trigger: GAGATGCCCCCTGGGGATTCAGACCACGGGACCAGT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCCTCACCCACCTGTCCTaGGTCGGCATGTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSLTHLS*VGMSGT
Trigger: AGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAG...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHRSLVP*SESPGG
Trigger: GCCCCCTGGGGATTCAGACCACGGGACCAGTGACCT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHRSLVP*SESPGG
Trigger: GCCCCCTGGGGATTCAGACCACGGGACCAGTGACCT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATACACAGCGGCAGTCGTaGGCAAACGAAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHTQRQS*ANEAAA
Trigger: GGCTGCTGCTTCGTTTGCCCACGACTGCCGCTGTGT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHTGTLC*GERTGL
Trigger: GAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHSSRTR*KSRCQL
Trigger: AAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCTCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSSSRTR*KSRCQL
Trigger: AAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGA...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCCAGCAGCCGATCTCTTaGCAATCGCTCCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSQQPIS*QSLPLP
Trigger: TGGTAGAGGGAGCGATTGTCAAGAGATCGGCTGCTG...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACCAGCAGCCGATCTCTTaGCAATCGCTCCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHQQPIS*QSLPLP
Trigger: TGGTAGAGGGAGCGATTGTCAAGAGATCGGCTGCTG...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCTTGAACCTGTCCCGTaGAGTAGACACGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHLEPVP*SRHEAP
Trigger: AGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCCTTGAACCTGTCCCGTaGAGTAGACACGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFLEPVP*SRHEAP
Trigger: AGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAG...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCCAACGCCAGGTCCTaGCTCCAGCGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPNARS*LQRQRD
Trigger: GTCCCTCTGGCGCTGGAGCCAGGACCTGGCGTTGGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCCCAACGCCAGGTCCTaGCTCCAGCGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCPNARS*LQRQRD
Trigger: GTCCCTCTGGCGCTGGAGCCAGGACCTGGCGTTGGG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACGTAGGACAAGGCTCCTaGACTTTCCTGGTATCCCCT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHVGQGS*TFLVSP
Trigger: AGGGGATACCAGGAAAGTCCAGGAGCCTTGTCCTAC...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCGTAGGACAAGGCTCCTaGACTTTCCTGGTATCCCCT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFVGQGS*TFLVSP
Trigger: AGGGGATACCAGGAAAGTCCAGGAGCCTTGTCCTAC...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTCCCTTTGTTCCAACTaGGAGTTCATGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHSLCSN*EFMPGW
Trigger: CCAGCCTGGCATGAACTCCCAGTTGGAACAAAGGGA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTCCCTTTGTTCCAACTaGGAGTTCATGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHSLCSN*EFMPGW
Trigger: CCAGCCTGGCATGAACTCCCAGTTGGAACAAAGGGA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTCTTCTCAAGGTCACTaGTCCCGTGGTCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFSSQGH*SRGLNP
Trigger: GGGATTCAGACCACGGGACCAGTGACCTTGAGAAGA...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGACGCAGAGGCACGGTCTaGTCCTGCGGTGCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRRRGTV*SCGAGS
Trigger: CGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCG...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCTCTGCAGGGCTGCTCTaGCGGCTCCCAGGCCGGACT +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFSAGLL*RLPGRT
Trigger: AGTCCGGCCTGGGAGCCGTCAGAGCAGCCCTGCAGA...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCGGACTGGTCTCAGATTaGAGCTCTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFGLVSD*SSSQGH
Trigger: GTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCC...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACGGACTGGTCTCAGATTaGAGCTCTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHGLVSD*SSSQGH
Trigger: GTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCC...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACGGATTTCCGAGTTCTTaGAGCTCTCGGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHGFPSS*SSRCVS
Trigger: AGACACACACCGAGAGCTTCAAGAACTCGGAAATCC...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCGGATTTCCGAGTTCTTaGAGCTCTCGGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSGFPSS*SSRCVS
Trigger: AGACACACACCGAGAGCTTCAAGAACTCGGAAATCC...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRGAVRA*PAGCST
Trigger: AGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCC...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFGAVRA*PAGCST
Trigger: AGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCC...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLGAVRA*PAGCST
Trigger: AGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCC...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGGGTCTGATCCTGCGGTaGTGGGTCGCGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKGLILR*WVAGAV
Trigger: GACAGCTCCCGCGACCCAGCACCGCAGGATCAGACC...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCCGTTCTGCAGGGCTaGTCTGACGGCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPVLQG*SDGSQA
Trigger: GGCCTGGGAGCCGTCAGAGCAGCCCTGCAGAACGGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGCCCCCACCCCGTTCTaGAGGGCTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLAPTPF*RAALTA
Trigger: AGCCGTCAGAGCAGCCCTGCAGAACGGGGTGGGGGC...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAGCCCCCACCCCGTTCTaGAGGGCTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRAPTPF*RAALTA
Trigger: AGCCGTCAGAGCAGCCCTGCAGAACGGGGTGGGGGC...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCCTCCACCTTTCCTGTaGAAAAGCTACCGTCACACT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHPPPFL*KSYRHT
Trigger: AGTGTGACGGTAGCTTTTGCACAGGAAAGGTGGAGG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR GCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHASERA*SGGDPD
Trigger: ATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGC...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHASERA*SGGDPD
Trigger: ATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGC...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATATGGTTCGTGAGGTTTaGACTGTGACGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHMVREV*TVTEGL
Trigger: AAGGCCTTCCGTCACAGTGCAAACCTCACGAACCAT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACATGGTTCGTGAGGTTTaGACTGTGACGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHMVREV*TVTEGL
Trigger: AAGGCCTTCCGTCACAGTGCAAACCTCACGAACCAT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGACTGATCCTGCGGTGCTaGGTCGCGGGAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRLILRC*VAGAVR
Trigger: CCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAG...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTATAATCTTCCAGCCTaGAGAGGGACTTCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHYNLPA*RGTSQV
Trigger: GACCTGCGAAGTCCCTCTCCAGGCTGGAAGATTATA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTATAATCTTCCAGCCTaGAGAGGGACTTCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHYNLPA*RGTSQV
Trigger: GACCTGCGAAGTCCCTCTCCAGGCTGGAAGATTATA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCCTTCCTCCAGCATTTaGGTCCCGCCTCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCPSSSI*VPPRAT
Trigger: TGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCTTCCTCCAGCATTTaGGTCCCGCCTCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPSSSI*VPPRAT
Trigger: TGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACGGCTTGCTCTGGTGGTaGTCCAGATATAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHGLLWW*SRYNLP
Trigger: TGGAAGATTATATCTGGATCACCACCAGAGCAAGCC...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCGGCTTGCTCTGGTGGTaGTCCAGATATAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFGLLWW*SRYNLP
Trigger: TGGAAGATTATATCTGGATCACCACCAGAGCAAGCC...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCGGCTTGCTCTGGTGGTaGTCCAGATATAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSGLLWW*SRYNLP
Trigger: TGGAAGATTATATCTGGATCACCACCAGAGCAAGCC...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCACTGGTCCCGTGGTCTaGATCCCCAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCTGPVV*IPRGHL
Trigger: GAGATGCCCCCTGGGGATTCAGACCACGGGACCAGT...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCATGCCGAATGAGGGCTaGGCTCTCACTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFMPNEG*ALTEEF
Trigger: AAATTCTTCAGTGAGAGCTCAGCCCTCATTCGGCAT...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSLRRED*SQIEAL
Trigger: AAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAA...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAACTGGTCCCGTGGTCTaGATCCCCAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRTGPVV*IPRGHL
Trigger: GAGATGCCCCCTGGGGATTCAGACCACGGGACCAGT...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTATGGTTTTGCTCTGTaGGGTTTCAGGATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHYGFAL*GFRISE
Trigger: CTCGGAAATCCTGAAACCTCACAGAGCAAAACCATA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCATGCTGACTAAGGGATaGGCTCTGGTTAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFMLTKG*ALVKRF
Trigger: AAAGCGTTTAACCAGAGCTCATCCCTTAGTCAGCAT...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACATGCTGACTAAGGGATaGGCTCTGGTTAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHMLTKG*ALVKRF
Trigger: AAAGCGTTTAACCAGAGCTCATCCCTTAGTCAGCAT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTTATTGAAGGTGTTTTaGATGTGGCTCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHLLKVF*MWLWAA
Trigger: TGCAGCCCAGAGCCACATGCAAAACACCTTCAATAA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTCCCAACGCCAGGTCCTaGCTCCAGCGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIPNARS*LQRQRD
Trigger: GTCCCTCTGGCGCTGGAGCCAGGACCTGGCGTTGGG...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTCTGATCCTGCGGTGCTaGGTCGCGGGAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSILILRC*VAGAVR
Trigger: CCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAG...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCCTGTGTTTTCCTCTTaGGGAAGGGCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCPVFSS*GRAGPG
Trigger: CCCAGGCCCTGCCCTTCCCCAAGAGGAAAACACAGG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFRSLVP*SESPGG
Trigger: GCCCCCTGGGGATTCAGACCACGGGACCAGTGACCT...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCCCGGTGTGGGTCTTTTaGTGGATTATGAGATTGGTA +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSPVWVF*WIMRLV
Trigger: TACCAATCTCATAATCCACCAAAAGACCCACACCGG...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCCGGTGTGGGTCTTTTaGTGGATTATGAGATTGGTA +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHPVWVF*WIMRLV
Trigger: TACCAATCTCATAATCCACCAAAAGACCCACACCGG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCTTTTGCATGTGGCTCTaGGCTGCAGACTCTAAGTTA +
Preference number: 4 (lower is better)
Translates to: PTCPESACPGLSPLLPCSFCMWL*AADSKL
Trigger: TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAA...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGACACAGCGGCAGTCGTaGGCAAACGAAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKTQRQS*ANEAAA
Trigger: GGCTGCTGCTTCGTTTGCCCACGACTGCCGCTGTGT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCCGGCGTGGAGTCTCTaGTGTCTAACGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCPAWSL*CLTKAE
Trigger: CTCTGCCTTCGTTAGACATCAGAGACTCCACGCCGG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCGGCGTGGAGTCTCTaGTGTCTAACGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPAWSL*CLTKAE
Trigger: CTCTGCCTTCGTTAGACATCAGAGACTCCACGCCGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACATAGTGGCTGTTTATTaGAGGTGTTTTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHIVAVY*RCFACG
Trigger: GCCACATGCAAAACACCTTCAATAAACAGCCACTAT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATATAGTGGCTGTTTATTaGAGGTGTTTTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHIVAVY*RCFACG
Trigger: GCCACATGCAAAACACCTTCAATAAACAGCCACTAT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCATAGTGGCTGTTTATTaGAGGTGTTTTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFIVAVY*RCFACG
Trigger: GCCACATGCAAAACACCTTCAATAAACAGCCACTAT...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKTGTLC*GERTGL
Trigger: GAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCTGTLC*GERTGL
Trigger: GAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGT...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCTGTGTTTTCCTCTTaGGGAAGGGCAGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPVFSS*GRAGPG
Trigger: CCCAGGCCCTGCCCTTCCCCAAGAGGAAAACACAGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTGTGGGTCTTTTGGTaGATTATGAGATTGGTACTC +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHVWVFW*IMRLVL
Trigger: GAGTACCAATCTCATAATCCACCAAAAGACCCACAC...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCSSRTR*KSRCQL
Trigger: AAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGA...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTCCTTCCTCCAGCATTTaGGTCCCGCCTCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIPSSSI*VPPRAT
Trigger: TGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGG...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTACTACCGTCACACTGCTaGAGAATGTGGATCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLLPSHC*RMWIPG
Trigger: CCCGGGGATCCACATTCTTCAGCAGTGTGACGGTAG...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR TCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTACCGGCGTGGAGTCTCTaGTGTCTAACGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLPAWSL*CLTKAE
Trigger: CTCTGCCTTCGTTAGACATCAGAGACTCCACGCCGG...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCGGCGTGGAGTCTCTaGTGTCTAACGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPAWSL*CLTKAE
Trigger: CTCTGCCTTCGTTAGACATCAGAGACTCCACGCCGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFTGTLC*GERTGL
Trigger: GAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGT...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACACATGCATATGGTTTTaGTCTGTGAGGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHTCIWF*SVRFQD
Trigger: ATCCTGAAACCTCACAGAGCAAAACCATATGCATGT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCACATGCATATGGTTTTaGTCTGTGAGGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFTCIWF*SVRFQD
Trigger: ATCCTGAAACCTCACAGAGCAAAACCATATGCATGT...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIRSLVP*SESPGG
Trigger: GCCCCCTGGGGATTCAGACCACGGGACCAGTGACCT...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTATCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLSSRTR*KSRCQL
Trigger: AAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGA...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTGTGTGTCTCACATTTaGGAGGTCTCGCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKCVSHI*EVSLPR
Trigger: CCGTGGAAGCGAGACCTCGCAAATGTGAGACACACA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCGTCACAGCCACTCTTTaGCTCGGCCTCAAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFVTATL*LGLKQN
Trigger: GTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGAC...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGACTTGAACCTGTCCCGTaGAGTAGACACGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRLEPVP*SRHEAP
Trigger: AGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAG...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCGTAGGACAAGGCTCCTaGACTTTCCTGGTATCCCCT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCVGQGS*TFLVSP
Trigger: AGGGGATACCAGGAAAGTCCAGGAGCCTTGTCCTAC...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTCTTCTCAAGGTCACTaGTCCCGTGGTCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCSSQGH*SRGLNP
Trigger: GGGATTCAGACCACGGGACCAGTGACCTTGAGAAGA...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCGGATTTCCGAGTTCTTaGAGCTCTCGGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCGFPSS*SSRCVS
Trigger: AGACACACACCGAGAGCTTCAAGAACTCGGAAATCC...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCTCCACCTTTCCTGTaGAAAAGCTACCGTCACACT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPPPFL*KSYRHT
Trigger: AGTGTGACGGTAGCTTTTGCACAGGAAAGGTGGAGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR GCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCTGTGTGTCTCACATTTaGGAGGTCTCGCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFCVSHI*EVSLPR
Trigger: CCGTGGAAGCGAGACCTCGCAAATGTGAGACACACA...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCATGGTTCGTGAGGTTTaGACTGTGACGGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCMVREV*TVTEGL
Trigger: AAGGCCTTCCGTCACAGTGCAAACCTCACGAACCAT...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTTAGATGTCTTCAGATaGTTTCAAGCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHLDVFR*FQAFSI
Trigger: AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTAGATGTCTTCAGATaGTTTCAAGCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHLDVFR*FQAFSI
Trigger: AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCGCTCCTGGACTTTCCTaGTATCCCCTCCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFAPGLS*YPLLEP
Trigger: AGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGC...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGCTCCTGGACTTTCCTaGTATCCCCTCCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLAPGLS*YPLLEP
Trigger: AGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGC...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCATTACATGCATATaGTTTTGCTCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHFITCI*FCSVRF
Trigger: AAACCTCACAGAGCAAAACCATATGCATGTAATGAA...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTTCATTACATGCATATaGTTTTGCTCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHFITCI*FCSVRF
Trigger: AAACCTCACAGAGCAAAACCATATGCATGTAATGAA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAGGACTGGTCTCAGATTaGAGCTCTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRGLVSD*SSSQGH
Trigger: GTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCC...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCATGCCGAATGAGGGCTaGGCTCTCACTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCMPNEG*ALTEEF
Trigger: AAATTCTTCAGTGAGAGCTCAGCCCTCATTCGGCAT...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGATGCCGAATGAGGGCTaGGCTCTCACTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKMPNEG*ALTEEF
Trigger: AAATTCTTCAGTGAGAGCTCAGCCCTCATTCGGCAT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAACTCTCAAGTATCCATaGTCCACCACTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRTLKYP*STTQQQ
Trigger: CTGCTGCTGAGTGGTGGATCATGGATACTTGAGAGT...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543471.5
CDS-3UTR GCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTACCTCCACCTTTCCTGTaGAAAAGCTACCGTCACACT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLPPPFL*KSYRHT
Trigger: AGTGTGACGGTAGCTTTTGCACAGGAAAGGTGGAGG...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTATATAATCTTCCAGCCTaGAGAGGGACTTCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLYNLPA*RGTSQV
Trigger: GACCTGCGAAGTCCCTCTCCAGGCTGGAAGATTATA...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKLRRED*SQIEAL
Trigger: AAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCLRRED*SQIEAL
Trigger: AAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAA...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCGGCTTGCTCTGGTGGTaGTCCAGATATAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFGLLWW*SRYNLP
Trigger: TGGAAGATTATATCTGGATCACCACCAGAGCAAGCC...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTATGGTTTTGCTCTGTaGGGTTTCAGGATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKYGFAL*GFRISE
Trigger: CTCGGAAATCCTGAAACCTCACAGAGCAAAACCATA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGATGCTGACTAAGGGATaGGCTCTGGTTAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKMLTKG*ALVKRF
Trigger: AAAGCGTTTAACCAGAGCTCATCCCTTAGTCAGCAT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTTGTGTGTCTCACATTTaGGAGGTCTCGCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSICVSHI*EVSLPR
Trigger: CCGTGGAAGCGAGACCTCGCAAATGTGAGACACACA...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTGCTCCTGGACTTTCCTaGTATCCCCTCCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIAPGLS*YPLLEP
Trigger: AGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGC...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTTCTTCTCAAGGTCACTaGTCCCGTGGTCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSISSQGH*SRGLNP
Trigger: GGGATTCAGACCACGGGACCAGTGACCTTGAGAAGA...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCGGTGTGGGTCTTTTaGTGGATTATGAGATTGGTA +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPVWVF*WIMRLV
Trigger: TACCAATCTCATAATCCACCAAAAGACCCACACCGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCTATGGTTTTGCTCTGTaGGGTTTCAGGATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFYGFAL*GFRISE
Trigger: CTCGGAAATCCTGAAACCTCACAGAGCAAAACCATA...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATATGGTTTTGCTCTGTaGGGTTTCAGGATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRYGFAL*GFRISE
Trigger: CTCGGAAATCCTGAAACCTCACAGAGCAAAACCATA...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIASERA*SGGDPD
Trigger: ATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGC...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATTATTGAAGGTGTTTTaGATGTGGCTCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRLLKVF*MWLWAA
Trigger: TGCAGCCCAGAGCCACATGCAAAACACCTTCAATAA...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTCTACACATGGGTCTTaGAATGAAGCTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKSTHGS*NEASER
Trigger: CCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGGTGTGGGTCTTTTGGTaGATTATGAGATTGGTACTC +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKVWVFW*IMRLVL
Trigger: GAGTACCAATCTCATAATCCACCAAAAGACCCACAC...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCGGTGTGGGTCTTTTaGTGGATTATGAGATTGGTA +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPVWVF*WIMRLV
Trigger: TACCAATCTCATAATCCACCAAAAGACCCACACCGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTATGCCGAATGAGGGCTaGGCTCTCACTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIMPNEG*ALTEEF
Trigger: AAATTCTTCAGTGAGAGCTCAGCCCTCATTCGGCAT...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAATAGTGGCTGTTTATTaGAGGTGTTTTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLIVAVY*RCFACG
Trigger: GCCACATGCAAAACACCTTCAATAAACAGCCACTAT...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGACATGCATATGGTTTTaGTCTGTGAGGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKTCIWF*SVRFQD
Trigger: ATCCTGAAACCTCACAGAGCAAAACCATATGCATGT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTATCTACACATGGGTCTTaGAATGAAGCTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLSTHGS*NEASER
Trigger: CCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGA...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCTCTACACATGGGTCTTaGAATGAAGCTTCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFSTHGS*NEASER
Trigger: CCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGA...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSILRRED*SQIEAL
Trigger: AAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAA...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCGTGTGGGTCTTTTGGTaGATTATGAGATTGGTACTC +
Preference number: 4 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFVWVFW*IMRLVL
Trigger: GAGTACCAATCTCATAATCCACCAAAAGACCCACAC...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR TCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTATGCTGACTAAGGGATaGGCTCTGGTTAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIMLTKG*ALVKRF
Trigger: AAAGCGTTTAACCAGAGCTCATCCCTTAGTCAGCAT...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAACATGCATATGGTTTTaGTCTGTGAGGTTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRTCIWF*SVRFQD
Trigger: ATCCTGAAACCTCACAGAGCAAAACCATATGCATGT...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTTTATTGAAGGTGTTTTaGATGTGGCTCTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSILLKVF*MWLWAA
Trigger: TGCAGCCCAGAGCCACATGCAAAACACCTTCAATAA...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATaGTTTCAAGCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKLDVFR*FQAFSI
Trigger: AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTGTGTGGGTCTTTTGGTaGATTATGAGATTGGTACTC +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIVWVFW*IMRLVL
Trigger: GAGTACCAATCTCATAATCCACCAAAAGACCCACAC...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR GCA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTATTAGATGTCTTCAGATaGTTTCAAGCCTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLLDVFR*FQAFSI
Trigger: AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAA...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATTCATTACATGCATATaGTTTTGCTCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRFITCI*FCSVRF
Trigger: AAACCTCACAGAGCAAAACCATATGCATGTAATGAA...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CCA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTTTCATTACATGCATATaGTTTTGCTCTGTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIFITCI*FCSVRF
Trigger: AAACCTCACAGAGCAAAACCATATGCATGTAATGAA...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 90 bp AGGCCGGACTCTTCCTCTCCAGCCTCTCCCCGCAGAGGCACGGTCTaGTCCTGCGGTGCTGGGTCGCGGGAGCTGTCCGGGCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RPDSSSPASPRRGTV*SCGAGSRELSGPAQ
Trigger: CTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCGGGGAGAGGCTGGAGAGGAAGAGTCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp TTCCTCTCCAGCCTCTCCCCGCAGAGGCACGGTCTGATCCTGCGGTaGTGGGTCGCGGGAGCTGTCCGGGCCTGCCCAGCCGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: FLSSLSPQRHGLILR*WVAGAVRACPAGCS
Trigger: GGAACACCCGGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCGGGGAGAGGCTGGAGAGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp CTCTCCAGCCTCTCCCCGCAGAGGCACGGTCTGATCCTGCGGTGCTaGGTCGCGGGAGCTGTCCGGGCCTGCCCAGCCGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LSSLSPQRHGLILRC*VAGAVRACPAGCST
Trigger: AGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCGGGGAGAGGCTGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp CACGGTCTGATCCTGCGGTGCTGGGTCGCGGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACTCCGTCTCCCGAGTCACAGCCACTC +
Preference number: 5 (lower is better)
Translates to: HGLILRCWVAGAVRA*PAGCSTPSPESQPL
Trigger: GAGTGGCTGTGACTCGGGAGACGGAGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp TTCTCTGGGCGTAAGGGTCTATCTACAGCAGCCCCCACCCCGTTCTaGAGGGCTGCTCTGACGGCTCCCAGGCCGGACTCTTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: FSGRKGLSTAAPTPF*RAALTAPRPDSSSP
Trigger: TGGAGAGGAAGAGTCCGGCCTGGGAGCCGTCAGAGCAGCCCTGCAGAACGGGGTGGGGGCTGCTGTAGATAGACCCTTACGCCCAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp CCCAGCCGGGTGTTCCACTCCGTCTCCCGAGTCACAGCCACTCTTTaGCTCGGCCTCAAGCAGAACCCGGTGAAAAAGCCGCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PSRVFHSVSRVTATL*LGLKQNPVKKPLPA
Trigger: AGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACTCGGGAGACGGAGTGGAACACCCGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATTCCTTCCTCCAGCATTaGAGTCCCGCCTCGCGCCAC +
Preference number: 5 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHSFLQH*SPASRH
Trigger: GTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGGA...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCCACGGGCACTCTCTGTaGCGGAGAGAGGACTGGTCT +
Preference number: 5 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFHGHSL*RREDWS
Trigger: AGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTG...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 90 bp CCCGAGTCACAGCCACTCTTTGGCTCGGCCTCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTTTCCGAAAAACGACTGGCAACTGGC +
Preference number: 5 (lower is better)
Translates to: PESQPLFGSASSRTR*KSRCQLSEKRLATG
Trigger: GCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp GCGAGGTCTCGCTTCCACGGGCACTCTCTGTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTTCTCAAGGTCACTGGTCCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: ARSRFHGHSLLRRED*SQIEALLKVTGPVV
Trigger: GACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCGCAGCAGCCGATCTCTaGACAATCGCTCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: PTCPESACPGLSPLLPCSAAADL*TIAPST
Trigger: GGTAGAGGGAGCGATTGTCAAGAGATCGGCTGCTGC...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp GAACCTGTCCCGTGGAGTAGACACGAGGCACCTCCACCTTTCCTGTaGAAAAGCTACCGTCACACTGCTGAAGAATGTGGATCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: EPVPWSRHEAPPPFL*KSYRHTAEECGSPG
Trigger: CCCCGGGGATCCACATTCTTCAGCAGTGTGACGGTAGCTTTTGCACAGGAAAGGTGGAGGTGCCTCGTGTCTACTCCACGGGACAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS TCA 90 bp CTTCCACGGGCACTCTCTGTTGCGGAGAGAGGACTGGTCTCAGATTaGAGCTCTTCTCAAGGTCACTGGTCCCGTGGTCTGAATCCCCAG +
Preference number: 5 (lower is better)
Translates to: LPRALSVAERGLVSD*SSSQGHWSRGLNPQ
Trigger: CTGGGGATTCAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp GCAGAACCCGGTGAAAAAGCCGCTGCCAGCTTTCCGAAAAACGACTaGCAACTGGCAACTGGCAACAATCTACCGGCAACCGCGAGAGCT +
Preference number: 5 (lower is better)
Translates to: AEPGEKAAASFPKND*QLATGNNLPATARA
Trigger: AGCTCTCGCGGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTTTCACCGGGTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp AAAAGCCGCTGCCAGCTTTCCGAAAAACGACTGGCAACTGGCAACTaGCAACAATCTACCGGCAACCGCGAGAGCTCAAGAACCGCTGTC +
Preference number: 5 (lower is better)
Translates to: KSRCQLSEKRLATGN*QQSTGNRESSRTAV
Trigger: GACAGCGGTTCTTGAGCTCTCGCGGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp CCGGTGAAAAAGCCGCTGCCAGCTTTCCGAAAAACGACTGGCAACTaGCAACTGGCAACAATCTACCGGCAACCGCGAGAGCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PVKKPLPAFRKTTGN*QLATIYRQPRELKN
Trigger: GTTCTTGAGCTCTCGCGGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTTTCACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp AAGGCTCCTGGACTTTCCTGGTATCCCCTCCTTGAACCTGTCCCGTaGAGTAGACACGAGGCACCTCCACCTTTCCTGTGCAAAAGCTAC +
Preference number: 5 (lower is better)
Translates to: KAPGLSWYPLLEPVP*SRHEAPPPFLCKSY
Trigger: GTAGCTTTTGCACAGGAAAGGTGGAGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACAGGATTTCCGAGTTCTaGAAGCTCTCGGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHRISEF*KLSVCV
Trigger: GACACACACCGAGAGCTTCAAGAACTCGGAAATCCT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCAGGATTTCCGAGTTCTaGAAGCTCTCGGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: PTCPESACPGLSPLLPCSRISEF*KLSVCV
Trigger: GACACACACCGAGAGCTTCAAGAACTCGGAAATCCT...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATCCCGGTGTGGGTCTTTaGGTGGATTATGAGATTGGT +
Preference number: 5 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHPGVGL*VDYEIG
Trigger: ACCAATCTCATAATCCACCAAAAGACCCACACCGGG...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp GTCCCGTGGTCTGAATCCCCAGGGGGCATCTCTACACATGGGTCTTaGAATGAAGCTTCAGAAAGGGCTTGCTCTGGTGGTGATCCAGAT +
Preference number: 5 (lower is better)
Translates to: VPWSESPGGISTHGS*NEASERACSGGDPD
Trigger: ATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGAGATGCCCCCTGGGGATTCAGACCACGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 90 bp GGAGAGATAAAGAGAGTTCTGATTCGGCTCACACAGCGGCAGTCGTaGGCAAACGAAGCAGCAGCCGATCTCTTGACAATCGCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: GEIKRVLIRLTQRQS*ANEAAADLLTIAPS
Trigger: AGAGGGAGCGATTGTCAAGAGATCGGCTGCTGCTTCGTTTGCCCACGACTGCCGCTGTGTGAGCCGAATCAGAACTCTCTTTATCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATGTTCCAGGACTGGTCTCAGATaGAAGCTCTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PTCPESACPGLSPLLPCSRTGLR*KLFSRS
Trigger: TGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCT...GGAACATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp TGTGTCTCACATTTGCGAGGTCTCGCTTCCACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTCAGATTGAAGCTCTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: CVSHLRGLASTGTLC*GERTGLRLKLFSRS
Trigger: TGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATGTGAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp GGCATCTCTACACATGGGTCTTGGAATGAAGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGATATAATCTTCCAGCCCGGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GISTHGSWNEASERA*SGGDPDIIFQPGAQ
Trigger: CTGGGCCCCGGGCTGGAAGATTATATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGAGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617266.2
CDS CCA 90 bp AGGACTGGTCTCAGATTGAAGCTCTTCTCAAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGCATCTCTACACATGGGTCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: RTGLRLKLFSRSLVP*SESPGGISTHGSWN
Trigger: ATTCCAAGACCCATGTGTAGAGATGCCCCCTGGGGATTCAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCACGGGCACTCTCTGTaGCGGAGAGAGGACTGGTCT +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCHGHSL*RREDWS
Trigger: AGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCCCTGGTATCCCCTCCTaGAACCTGTCCCGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCPGIPS*NLSRGV
Trigger: TACTCCACGGGACAGGTTCAAGGAGGGGATACCAGG...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCTGGTATCCCCTCCTaGAACCTGTCCCGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPGIPS*NLSRGV
Trigger: TACTCCACGGGACAGGTTCAAGGAGGGGATACCAGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGACACGGGCACTCTCTGTaGCGGAGAGAGGACTGGTCT +
Preference number: 5 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRHGHSL*RREDWS
Trigger: AGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTG...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCGCAGCAGCCGATCTCTaGACAATCGCTCCCTCTACC +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCAAADL*TIAPST
Trigger: GGTAGAGGGAGCGATTGTCAAGAGATCGGCTGCTGC...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKSHSHS*ARPQAE
Trigger: TTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCGTGTGTGTCTCACATTaGCGAGGTCTCGCTTCCACG +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCVCVSH*RGLAST
Trigger: CGTGGAAGCGAGACCTCGCAAATGTGAGACACACAC...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TTCTCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACAATAGTGGCTGTTTATaGAAGGTGTTTTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: FSDPHPPVLSRHVRDSLHNSGCL*KVFCMW
Trigger: CCACATGCAAAACACCTTCAATAAACAGCCACTATT...GTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp CCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCTACCATAATAGTGGCTGTTTATaGAAGGTGTTTTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: PHPPVLSRHVRDSLHFYHNSGCL*KVFCMW
Trigger: CCACATGCAAAACACCTTCAATAAACAGCCACTATT...ATGGTAGAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TCAGATCCTCACCCACCTGTCCTGAGTCGGCATGTCCGGGACTCTCTCCACTTCAATAGTGGCTGTTTATaGAAGGTGTTTTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: SDPHPPVLSRHVRDSLHFNSGCL*KVFCMW
Trigger: CCACATGCAAAACACCTTCAATAAACAGCCACTATT...GAAGTGGAGAGAGTCCCGGACATGCCGACTCAGGACAGGTGGGTGAGGATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 90 bp GGCATCTCTACACATGGGTCTTGGAATGAAGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGATATAATCTTCCAGCCTGGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: GISTHGSWNEASERA*SGGDPDIIFQPGEG
Trigger: TCCCTCTCCAGGCTGGAAGATTATATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRSHSHS*ARPQAE
Trigger: TTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACT...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLSHSHS*ARPQAE
Trigger: TTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACT...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFSHSHS*ARPQAE
Trigger: TTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACT...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGCCATGCGCCTTCCCTTaGTTCCAACTGGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKPCAFP*FQLGVH
Trigger: ATGAACTCCCAGTTGGAACAAAGGGAAGGCGCATGG...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGAGTGTGTGTCTCACATTaGCGAGGTCTCGCTTCCACG +
Preference number: 5 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRVCVSH*RGLAST
Trigger: CGTGGAAGCGAGACCTCGCAAATGTGAGACACACAC...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTACCATGCGCCTTCCCTTaGTTCCAACTGGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLPCAFP*FQLGVH
Trigger: ATGAACTCCCAGTTGGAACAAAGGGAAGGCGCATGG...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS-3UTR CAA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCATGCGCCTTCCCTTaGTTCCAACTGGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPCAFP*FQLGVH
Trigger: ATGAACTCCCAGTTGGAACAAAGGGAAGGCGCATGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS TCA 90 bp ATGCATATGGTTTTGCTCTGTGAGGTTTCAGGATTTCCGAGTTCTTaGAGCTCTCGGTGTGTGTCTCACATTTGCGAGGTCTCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: MHMVLLCEVSGFPSS*SSRCVSHICEVSLP
Trigger: TGGAAGCGAGACCTCGCAAATGTGAGACACACACCGAGAGCTTCAAGAACTCGGAAATCCTGAAACCTCACAGAGCAAAACCATATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGAGGACTGGTCTCAGATaGAAGCTCTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKRTGLR*KLFSRS
Trigger: TGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCT...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAAGGATTTCCGAGTTCTaGAAGCTCTCGGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLRISEF*KLSVCV
Trigger: GACACACACCGAGAGCTTCAAGAACTCGGAAATCCT...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp AAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGACCCGGTGTGGGTCTTTaGGTGGATTATGAGATTGGT +
Preference number: 5 (lower is better)
Translates to: KVFCMWLWAADSKLDVFRPGVGL*VDYEIG
Trigger: ACCAATCTCATAATCCACCAAAAGACCCACACCGGG...TCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCCCCGGTGTGGGTCTTTaGGTGGATTATGAGATTGGT +
Preference number: 5 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFPGVGL*VDYEIG
Trigger: ACCAATCTCATAATCCACCAAAAGACCCACACCGGG...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 90 bp AGATGTAGGGAGGCATTAGAGTGTTCACAGACTCTCAAGTATCCATaGTCCACCACTCAGCAGCAGTGTGCAAATCACGTAACCTCTCTA +
Preference number: 5 (lower is better)
Translates to: RCREALECSQTLKYP*STTQQQCANHVTSL
Trigger: TAGAGAGGTTACGTGATTTGCACACTGCTGCTGAGTGGTGGATCATGGATACTTGAGAGTCTGTGAACACTCTAATGCCTCCCTACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543471.5
CDS-3UTR CAA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTAGGATTTCCGAGTTCTaGAAGCTCTCGGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIRISEF*KLSVCV
Trigger: GACACACACCGAGAGCTTCAAGAACTCGGAAATCCT...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp AGTGGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTACATGCATATGGTTTaGCTCTGTGAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SGCLLKVFCMWLWAADSKYMHMV*LCEVSG
Trigger: TCCTGAAACCTCACAGAGCAAAACCATATGCATGTA...CTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTACATGCATATGGTTTaGCTCTGTGAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCYMHMV*LCEVSG
Trigger: TCCTGAAACCTCACAGAGCAAAACCATATGCATGTA...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTCCCGGTGTGGGTCTTTaGGTGGATTATGAGATTGGT +
Preference number: 5 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIPGVGL*VDYEIG
Trigger: ACCAATCTCATAATCCACCAAAAGACCCACACCGGG...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCTTTCAAGCCTTTAGCATTAGGACTGGTCTCAGATaGAAGCTCTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: WAADSKLDVFRCFQAFSIRTGLR*KLFSRS
Trigger: TGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCT...AATGCTAAAGGCTTGAAAGCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp TTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCTACATGCATATGGTTTaGCTCTGTGAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LKVFCMWLWAADSKLDVFYMHMV*LCEVSG
Trigger: TCCTGAAACCTCACAGAGCAAAACCATATGCATGTA...GAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GGCTGTTTATTGAAGGTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTATACATGCATATGGTTTaGCTCTGTGAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GCLLKVFCMWLWAADSKLYMHMV*LCEVSG
Trigger: TCCTGAAACCTCACAGAGCAAAACCATATGCATGTA...TAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACACCTTCAATAAACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS-3UTR CAA 90 bp GTGTTTTGCATGTGGCTCTGGGCTGCAGACTCTAAGTTAGATGTCTTCAGATGCAATAGTGGCTGTTTATaGAAGGTGTTTTGCATGTGG +
Preference number: 5 (lower is better)
Translates to: VFCMWLWAADSKLDVFRCNSGCL*KVFCMW
Trigger: CCACATGCAAAACACCTTCAATAAACAGCCACTATT...GCATCTGAAGACATCTAACTTAGAGTCTGCAGCCCAGAGCCACATGCAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp CTCTCCCCGCAGAGGCACGGTCTGATCCTGCGGTGCTaGGTCGCGGGAGCTGTCCGGGCCTGCCCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: LSPQRHGLILRC*VAGAVRACPAG
Trigger: CCCGGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCGGGGAGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 72 bp AGCCTCTCCCCGCAGAGGCACGGTCTGATCCTGCGGTaGTGGGTCGCGGGAGCTGTCCGGGCCTGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SLSPQRHGLILR*WVAGAVRACPA
Trigger: GGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGATCAGACCGTGCCTCTGCGGGGAGAGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 72 bp ATCCTGCGGTGCTGGGTCGCGGGAGCTGTCCGGGCCTaGCCAGCCGGGTGTTCCACTCCGTCTCCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: ILRCWVAGAVRA*PAGCSTPSPES
Trigger: TGACTCGGGAGACGGAGTGGAACACCCGGCTGGGCAGGCCCGGACAGCTCCCGCGACCCAGCACCGCAGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp AGAACCGCTGTCCAAGTACCGCCCAACGCCAGGTCCTaGCTCCAGCGCCAGAGGGACGCGCCTGATTGGCGC +
Preference number: 6 (lower is better)
Translates to: RTAVQVPPNARS*LQRQRDAPDWR
Trigger: GCGCCAATCAGGCGCGTCCCTCTGGCGCTGGAGCCAGGACCTGGCGTTGGGCGGTACTTGGACAGCGGTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp GGGCCTGGGGAAGGCAGTACTCCTTCCTCCAGCATTTaGGTCCCGCCTCGCGCCACAGCCTCCCAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: GPGEGSTPSSSI*VPPRATASQQF
Trigger: GAACTGCTGGGAGGCTGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGGAGTACTGCCTTCCCCAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342483.5
CDS CAA 90 bp GCCCAGCCGGGTGTTCCACTCCGTCTCCCGAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAACCCGGTGAAAAAGCCGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: AQPGVPLRLPSHSHS*ARPQAEPGEKAAAS
Trigger: GCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACTCGGGAGACGGAGTGGAACACCCGGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp AGGGCCTGGGGAAGGCAGTACTCCTTCCTCCAGCATTaGAGTCCCGCCTCGCGCCACAGCCTCCCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: RAWGRQYSFLQH*SPASRHSLPAV
Trigger: AACTGCTGGGAGGCTGTGGCGCGAGGCGGGACTCAAATGCTGGAGGAAGGAGTACTGCCTTCCCCAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342483.5
CDS CCA 72 bp GTGTTCCACTCCGTCTCCCGAGTCACAGCCACTCTTTaGCTCGGCCTCAAGCAGAACCCGGTGAAAAAGCCG +
Preference number: 6 (lower is better)
Translates to: VFHSVSRVTATL*LGLKQNPVKKP
Trigger: CGGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACTCGGGAGACGGAGTGGAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp GGTGTTCCACTCCGTCTCCCGAGTCACAGCCACTCTTaGGCTCGGCCTCAAGCAGAACCCGGTGAAAAAGCC +
Preference number: 6 (lower is better)
Translates to: GVPLRLPSHSHS*ARPQAEPGEKA
Trigger: GGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTGTGACTCGGGAGACGGAGTGGAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp GGCAGTCGTGGGCAAACGAAGCAGCAGCCGATCTCTTaGCAATCGCTCCCTCTACCACTCCTCACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: GSRGQTKQQPIS*QSLPLPLLTSF
Trigger: GAAGGAGGTGAGGAGTGGTAGAGGGAGCGATTGTCAAGAGATCGGCTGCTGCTTCGTTTGCCCACGACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp AGGACAAGGCTCCTGGACTTTCCTGGTATCCCCTCCTaGAACCTGTCCCGTGGAGTAGACACGAGGCACCTC +
Preference number: 6 (lower is better)
Translates to: RTRLLDFPGIPS*NLSRGVDTRHL
Trigger: GAGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGCCTTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS CAA 90 bp AGTCCTAGTAGGACAAGGCTCCTGGACTTTCCTGGTATCCCCTCCTaGAACCTGTCCCGTGGAGTAGACACGAGGCACCTCCACCTTTCC +
Preference number: 6 (lower is better)
Translates to: SPSRTRLLDFPGIPS*NLSRGVDTRHLHLS
Trigger: GGAAAGGTGGAGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAGGAGGGGATACCAGGAAAGTCCAGGAGCCTTGTCCTACTAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS CAA 90 bp GCTTCCACGGGCACTCTCTGTTGCGGAGAGAGGACTGGTCTCAGATaGAAGCTCTTCTCAAGGTCACTGGTCCCGTGGTCTGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: ASTGTLCCGERTGLR*KLFSRSLVPWSESP
Trigger: TGGGGATTCAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp CAGCCACTCTTTGGCTCGGCCTCAAGCAGAACCCGGTaGAAAAGCCGCTGCCAGCTTTCCGAAAAACGACTG +
Preference number: 6 (lower is better)
Translates to: QPLFGSASSRTR*KSRCQLSEKRL
Trigger: CAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTTTCACCGGGTTCTGCTTGAGGCCGAGCCAAAGAGTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp AAGCCGCTGCCAGCTTTCCGAAAAACGACTGGCAACTaGCAACTGGCAACAATCTACCGGCAACCGCGAGAG +
Preference number: 6 (lower is better)
Translates to: KPLPAFRKTTGN*QLATIYRQPRE
Trigger: CTCTCGCGGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp GCACTCTCTGTTGCGGAGAGAGGACTGGTCTCAGATTaGAGCTCTTCTCAAGGTCACTGGTCCCGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: ALSVAERGLVSD*SSSQGHWSRGL
Trigger: CAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp TACCATGTTCCTAGTTACTCTCCGGCGTGGAGTCTCTaGTGTCTAACGAAGGCAGAGCTGCACCGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: YHVPSYSPAWSL*CLTKAELHRKA
Trigger: GGCCTTCCGGTGCAGCTCTGCCTTCGTTAGACATCAGAGACTCCACGCCGGAGAGTAACTAGGAACATGGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 72 bp CATTTGCGAGGTCTCGCTTCCACGGGCACTCTCTGTTaGGGAGAGAGGACTGGTCTCAGATTGAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: HLRGLASTGTLC*GERTGLRLKLF
Trigger: GAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp CTCAGATTGAAGCTCTTCTCAAGGTCACTGGTCCCGTaGTCTGAATCCCCAGGGGGCATCTCTACACATGGG +
Preference number: 6 (lower is better)
Translates to: LRLKLFSRSLVP*SESPGGISTHG
Trigger: CCCATGTGTAGAGATGCCCCCTGGGGATTCAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp CGCTTCCACGGGCACTCTCTGTTGCGGAGAGAGGACTaGTCTCAGATTGAAGCTCTTCTCAAGGTCACTGGT +
Preference number: 6 (lower is better)
Translates to: RFHGHSLLRRED*SQIEALLKVTG
Trigger: ACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp GGCACTCTCTGTTGCGGAGAGAGGACTGGTCTCAGATaGAAGCTCTTCTCAAGGTCACTGGTCCCGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GTLCCGERTGLR*KLFSRSLVPWS
Trigger: AGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp TCCGAGTTCTTGAAGCTCTCGGTGTGTGTCTCACATTaGCGAGGTCTCGCTTCCACGGGCACTCTCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SEFLKLSVCVSH*RGLASTGTLCC
Trigger: GCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATGTGAGACACACACCGAGAGCTTCAAGAACTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 90 bp GTGTGTCTCACATTTGCGAGGTCTCGCTTCCACGGGCACTCTCTGTaGCGGAGAGAGGACTGGTCTCAGATTGAAGCTCTTCTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: VCLTFARSRFHGHSL*RREDWSQIEALLKV
Trigger: GACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATGTGAGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CAA 90 bp TTCAGGATTTCCGAGTTCTTGAAGCTCTCGGTGTGTGTCTCACATTaGCGAGGTCTCGCTTCCACGGGCACTCTCTGTTGCGGAGAGAGG +
Preference number: 6 (lower is better)
Translates to: FRISEFLKLSVCVSH*RGLASTGTLCCGER
Trigger: CCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATGTGAGACACACACCGAGAGCTTCAAGAACTCGGAAATCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp ATTGAAGCTCTTCTCAAGGTCACTGGTCCCGTGGTCTaGATCCCCAGGGGGCATCTCTACACATGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: IEALLKVTGPVV*IPRGHLYTWVL
Trigger: CAAGACCCATGTGTAGAGATGCCCCCTGGGGATTCAGACCACGGGACCAGTGACCTTGAGAAGAGCTTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 72 bp CCGTGGAGTAGACACGAGGCACCTCCACCTTTCCTGTaGAAAAGCTACCGTCACACTGCTGAAGAATGTGGA +
Preference number: 6 (lower is better)
Translates to: PWSRHEAPPPFL*KSYRHTAEECG
Trigger: TCCACATTCTTCAGCAGTGTGACGGTAGCTTTTGCACAGGAAAGGTGGAGGTGCCTCGTGTCTACTCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
CDS CCA 72 bp TGCCAGCTTTCCGAAAAACGACTGGCAACTGGCAACTaGCAACAATCTACCGGCAACCGCGAGAGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: CQLSEKRLATGN*QQSTGNRESSR
Trigger: TCTTGAGCTCTCGCGGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp GGTGAAAAAGCCGCTGCCAGCTTTCCGAAAAACGACTaGCAACTGGCAACTGGCAACAATCTACCGGCAACC +
Preference number: 6 (lower is better)
Translates to: GEKAAASFPKND*QLATGNNLPAT
Trigger: GGTTGCCGGTAGATTGTTGCCAGTTGCCAGTTGCCAGTCGTTTTTCGGAAAGCTGGCAGCGGCTTTTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp AAGAGAGTTCTGATTCGGCTCACACAGCGGCAGTCGTaGGCAAACGAAGCAGCAGCCGATCTCTTGACAATC +
Preference number: 6 (lower is better)
Translates to: KRVLIRLTQRQS*ANEAAADLLTI
Trigger: GATTGTCAAGAGATCGGCTGCTGCTTCGTTTGCCCACGACTGCCGCTGTGTGAGCCGAATCAGAACTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612342.4
ENST00000617266.2
CDS CAA 72 bp ACATTTGCGAGGTCTCGCTTCCACGGGCACTCTCTGTaGCGGAGAGAGGACTGGTCTCAGATTGAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: TFARSRFHGHSL*RREDWSQIEAL
Trigger: AAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCCGTGGAAGCGAGACCTCGCAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS CCA 72 bp TCTGAATCCCCAGGGGGCATCTCTACACATGGGTCTTaGAATGAAGCTTCAGAAAGGGCTTGCTCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SESPGGISTHGS*NEASERACSGG
Trigger: ACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGAGATGCCCCCTGGGGATTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS TCA 72 bp GTTTTGCTCTGTGAGGTTTCAGGATTTCCGAGTTCTTaGAGCTCTCGGTGTGTGTCTCACATTTGCGAGGTC +
Preference number: 6 (lower is better)
Translates to: VLLCEVSGFPSS*SSRCVSHICEV
Trigger: GACCTCGCAAATGTGAGACACACACCGAGAGCTTCAAGAACTCGGAAATCCTGAAACCTCACAGAGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4
ENST00000617266.2
CDS GCA 72 bp ACACATGGGTCTTGGAATGAAGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGATATAATCTTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: THGSWNEASERA*SGGDPDIIFQP
Trigger: GGGCTGGAAGATTATATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617266.2
CDS GCA 72 bp ACACATGGGTCTTGGAATGAAGCTTCAGAAAGGGCTTaGTCTGGTGGTGATCCAGATATAATCTTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: THGSWNEASERA*SGGDPDIIFQP
Trigger: AGGCTGGAAGATTATATCTGGATCACCACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342483.5
ENST00000543471.5
ENST00000612342.4