RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF786 (Homo sapiens)

Ensembl gene IDs: ENSG00000197362

Ensembl transcript IDs: ENST00000316286.13, ENST00000491431.2

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAACCCGTCTACCAGCGGGTCTGGCTACTGTTGCTGTGGATTCCTaGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGC +
Preference number: 1 (lower is better)
Translates to: KTRLPAGLATVAVDS*AIPILLNALDVPLC
Trigger: GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR CCA 90 bp CTGCTCCTAAAACCCGTCTACCAGCGGGTCTGGCTACTGTTGCTGTaGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCC +
Preference number: 1 (lower is better)
Translates to: LLLKPVYQRVWLLLL*IPGQYQSCSTLWMS
Trigger: GGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTTAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR CCA 90 bp CTCAAAGAAGGATACCTGCTCCTAAAACCCGTCTACCAGCGGGTCTaGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCA +
Preference number: 1 (lower is better)
Translates to: LKEGYLLLKPVYQRV*LLLLWIPGQYQSCS
Trigger: TGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTTAGGAGCAGGTATCCTTCTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR CAA 90 bp GGATACCTGCTCCTAAAACCCGTCTACCAGCGGGTCTGGCTACTGTaGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGG +
Preference number: 2 (lower is better)
Translates to: GYLLLKPVYQRVWLL*LWIPGQYQSCSTLW
Trigger: CCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTTAGGAGCAGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCC +
Preference number: 2 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPGQYQS*STLWMS
Trigger: GGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGTTGCTGTGGATTCCTaGGCAATACCAATCCTGCTC +
Preference number: 2 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKVAVDS*AIPILL
Trigger: GAGCAGGATTGGTATTGCCCAGGAATCCACAGCAAC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGTTGCTGTGGATTCCTaGGCAATACCAATCCTGCTC +
Preference number: 2 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPVAVDS*AIPILL
Trigger: GAGCAGGATTGGTATTGCCCAGGAATCCACAGCAAC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATGGCTACTGTTGCTGTaGATTCCTGGGCAATACCAA +
Preference number: 2 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKWLLLL*IPGQYQ
Trigger: TTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR GCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCC +
Preference number: 2 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHGQYQS*STLWMS
Trigger: GGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR GCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTTCATATTCCTAACTTaGATGACACTCTTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHFIFLT*MTLLLK
Trigger: TTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR CCA 72 bp AAACCCGTCTACCAGCGGGTCTGGCTACTGTTGCTGTaGATTCCTGGGCAATACCAATCCTGCTCAACGCTT +
Preference number: 3 (lower is better)
Translates to: KPVYQRVWLLLL*IPGQYQSCSTL
Trigger: AAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR CCA 72 bp GGATACCTGCTCCTAAAACCCGTCTACCAGCGGGTCTaGCTACTGTTGCTGTGGATTCCTGGGCAATACCAA +
Preference number: 3 (lower is better)
Translates to: GYLLLKPVYQRV*LLLLWIPGQYQ
Trigger: TTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCGCTGGTAGACGGGTTTTAGGAGCAGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
3UTR-3UTR CAA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATCTTCATATTCCTAACTaGCATGACACTCTTGCTCAA +
Preference number: 3 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHLHIPN*HDTLAQ
Trigger: TTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGTCCCGCCCGGCCCTaGCAAACCCGACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRGPARP*QTRPSP
Trigger: CGGAGACGGTCGGGTTTGCCAGGGCCGGGCGGGACC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCCCTCCCGGCTGTGCTaGCACCGGCGAGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRPSRLC*HRRACV
Trigger: CACGCAGGCTCGCCGGTGCCAGCACAGCCGGGAGGG...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCCGTGCGCGTGCTGGTaGACCTGCAGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRPCACW*TCSRRR
Trigger: GCGCCGCCTGCTGCAGGTCCACCAGCACGCGCACGG...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGCAGGCGCTGATGGCTaGGCAGCTGCCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRAGADG*AAAPSG
Trigger: GCCTGAAGGGGCAGCTGCTCAGCCATCAGCGCCTGC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGGCAGGCCCTGATGGCTaGGCAGCTGCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTAGPDG*AAAPSG
Trigger: GCCTGAAGGCGCAGCTGCTCAGCCATCAGGGCCTGC...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGCCAAGGGTGCTGGGTaGTCTCCCAGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRAKGAG*SPRRGR
Trigger: ACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCACCGGCGAGCCTGCGTaGTGTCCACTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRTGEPA*CPLGGS
Trigger: GCTCCCTCCCAGTGGACAGCACGCAGGCTCGCCGGT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTGGCACCGGCGAGCCTaGGTGCTGTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTWHRRA*VLSTGR
Trigger: CCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGCCCCTCTGCGCCATaGTGCAGCGCCTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGPSAP*CSASVS
Trigger: GGACACGGAGGCGCTGCAGCATGGCGCAGAGGGGCC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGCGGGAGGCGGTGGCTaGGATGGGTCAGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRAGGGG*DGSARV
Trigger: GACACGAGCTGACCCATCCCAGCCACCGCCTCCCGC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCGCATGGGGTGCACTaGGCAGGCTTCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTPHGVH*AGFSPC
Trigger: GCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGCAGGAACCTGCCCTaGTGCGCACTGACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTRRNLP*CALTPL
Trigger: GAGGGGAGTCAGTGCGCAGCAGGGCAGGTTCCTGCG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316286.13
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGGCCTCTCCCCACCGTaGCGGAGCCGGTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDGLSPP*RSRWAL
Trigger: GAGAGCCCACCGGCTCCGGCACGGTGGGGAGAGGCC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCACAGGCCAAGGGTGCTaGGTGCTCTCCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCTGQGC*VLSQAG
Trigger: CCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGT...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGAGCGCTTGCCGCATaGGGTGCACTGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRGALAA*GALGRL
Trigger: AAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCCCGTGCCGGAGCCGGTaGGCTCTCAGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCPCRSR*ALSMLS
Trigger: GGAGAGCATGCTGAGAGCCCACCGGCTCCGGCACGG...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCCGCTGTGCAGCAGCTaGTGGGCCTTCATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRPLCSS*WAFMSA
Trigger: GGCCGACATGAAGGCCCACCAGCTGCTGCACAGCGG...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCACGCCACACCGGAAGTaGCTCTGTACCCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRTPHRK*LCTRGL
Trigger: CAGCCCTCGGGTACAGAGGCACTTCCGGTGTGGCGT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGGCCCCTCTGCGCCATaGTGCAGCGCCTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDGPSAP*CSASVS
Trigger: GGACACGGAGGCGCTGCAGCATGGCGCAGAGGGGCC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGCTTTTCTCCAGTATaGGCCCTGCAGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRGFSPV*ALQGLA
Trigger: CGCCAGCCCCTGCAGGGCGCATACTGGAGAAAAGCC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGCGTCGTGTCTCTGTaGGCTCCCGAGGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGVVSL*APEGDA
Trigger: GGCATCACCCTCGGGAGCCCACAGAGACACGACGCC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGTGGTGGAGGAGCCCTaGCGTCGTGTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCVVEEP*RRVSVG
Trigger: GCCCACAGAGACACGACGCCAGGGCTCCTCCACCAC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGGTGTGGGCCGCCAGATaGCGCAGCAGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTVWAAR*RSRHSF
Trigger: GAAGCTGTGTCTGCTGCGCCATCTGGCGGCCCACAC...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTCCGTGTCCCCTTCCTaGTGGCTGTTCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTSVSPS*WLFPSW
Trigger: CCAGGAGGGGAACAGCCACCAGGAAGGGGACACGGA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCCACCGTGCGCGTGCTaGTGGACCTGCAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDPPCAC*WTCSRR
Trigger: CCGCCTGCTGCAGGTCCACCAGCACGCGCACGGTGG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGGGCCTGTGGATGCGCTaGTGCCTCAGCATGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTGLWMR*CLSMCP
Trigger: GGGACACATGCTGAGGCACCAGCGCATCCACAGGCC...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGCAGGCGCTGATGGCTaGGCAGCTGCCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDAGADG*AAAPSG
Trigger: GCCTGAAGGGGCAGCTGCTCAGCCATCAGCGCCTGC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGAAACTCCTTGGCTCGTaGTCCTCCTGCCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTKLLGS*SSCHGL
Trigger: GAGGCCGTGGCAGGAGGATCACGAGCCAAGGAGTTT...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTGCTCCACGGCATCTaGGTCTCCGCCCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLLHGI*VSALLL
Trigger: CAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTCTGTACCCGAGGGCTaGTCCACGGCATCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTSVPEG*STASAS
Trigger: AGACGCAGATGCCGTGGAGCAGCCCTCGGGTACAGA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCACGCCACACCGGAAGTaGCTCTGTACCCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCTPHRK*LCTRGL
Trigger: CAGCCCTCGGGTACAGAGGCACTTCCGGTGTGGCGT...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATACCGGCGAGCCTGCGTaGTGTCCACTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDTGEPA*CPLGGS
Trigger: GCTCCCTCCCAGTGGACAGCACGCAGGCTCGCCGGT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTCCAGTATGCGCCCTaGAGGGGCTGGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLQYAP*RGWRAW
Trigger: CCAGGCTCGCCAGCCCCTGCAGGGCGCATACTGGAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGCTTTTCTCCAGTATaGGCCCTGCAGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGFSPV*ALQGLA
Trigger: CGCCAGCCCCTGCAGGGCGCATACTGGAGAAAAGCC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTGTGCAGCCGCTGGTaGCGCAGCAGCTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVCSRW*RSSCPL
Trigger: GAGGGGACAGCTGCTGCGGCACCAGCGGCTGCACAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGTGGGCTCTCAGCATaGTCTCCAGGCGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRGGLSA*SPGGSS
Trigger: TGAGCTTCCGCCTGGAGAGCATGCTGAGAGCCCACC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGTGGGCCTTCAGGATaGCCTTCAGGCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGGPSG*PSGGSA
Trigger: AGCGCTTCCGCCTGAAGGGCATCCTGAAGGCCCACC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCCGCATGGGGTGCACTaGGCAGGCTTCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDPHGVH*AGFSPC
Trigger: GCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGAGCTTGCACTGGTaGGTGAAGCCTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTRSLHW*VKPLPH
Trigger: GTGTGGCAGAGGCTTCACCCACCAGTGCAAGCTCCG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCTGTGCGTGTGCTGGTaGGCCTTCAGGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRLCVCW*AFRMPF
Trigger: GAAGGGCATCCTGAAGGCCCACCAGCACACGCACAG...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGACGTGTCCGGTCCTTTaGGTGGCCTCTCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTTCPVL*VASLVH
Trigger: ATGCACCAGAGAGGCCACTCAAAGGACCGGACACGT...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCAGACAGGCCAAGGGTaGTGGGTGCTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDQTGQG*WVLSQA
Trigger: CGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGCTTGCCGCATGGGGTaGACTGGGCAGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDACRMG*TGQASP
Trigger: GGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGTGGGCTCTCAGCATaGTCTCCAGGCGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGGLSA*SPGGSS
Trigger: TGAGCTTCCGCCTGGAGAGCATGCTGAGAGCCCACC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTGTGCACTCTCAGGTaGTCACGGAGCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLCTLR*SRSLHW
Trigger: CCAGTGCAAGCTCCGTGAGCACCTGAGAGTGCACAG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTCCTTGCTGTGCGTGTaGTGGTGGGCCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRSLLCV*WWAFRM
Trigger: CATCCTGAAGGCCCACCAGCACACGCACAGCAAGGA...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTGTGGATGCGCTGGTaGCTCAGCATGTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLWMRW*LSMCPL
Trigger: AAGGGGACACATGCTGAGGCACCAGCGCATCCACAG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTCTCGGGCCTGTGGATaGGCTGGTGCCTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCSRACG*AGASAC
Trigger: ACATGCTGAGGCACCAGCGCATCCACAGGCCCGAGA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTGGTGGAGGAGCCCTaGCGTCGTGTCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVVEEP*RRVSVG
Trigger: GCCCACAGAGACACGACGCCAGGGCTCCTCCACCAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGCAGGCGGAAGCGCTTaGTGCAATGCGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCAGGSA*CNAHTG
Trigger: TCCAGTGTGCGCATTGCACCAAGCGCTTCCGCCTGC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTCACGGAGCTTGCACTaGTGGGTGAAGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRSRSLH*WVKPLP
Trigger: TGGCAGAGGCTTCACCCACCAGTGCAAGCTCCGTGA...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCACGTGTCCGGTCCTTTaGGTGGCCTCTCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCTCPVL*VASLVH
Trigger: ATGCACCAGAGAGGCCACTCAAAGGACCGGACACGT...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGCTTGGCGAAGCCCTTaGCACACTTCCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCAWRSP*HTSCRR
Trigger: TCTCCTGCAGGAAGTGTGGCAAGGGCTTCGCCAAGC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTCTGACGGAAGTTCCTaGCACACTTGGCACACCGGA +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRSDGSS*HTWHTG
Trigger: TCCGGTGTGCCAAGTGTGGCAGGAACTTCCGTCAGA...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTCCTTGCTGTGCGTGTaGTGGTGGGCCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCSLLCV*WWAFRM
Trigger: CATCCTGAAGGCCCACCAGCACACGCACAGCAAGGA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGGCCTCTCCTTGCTGTaGGTGTGCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDGLSLL*VCWWAF
Trigger: GAAGGCCCACCAGCACACGCACAGCAAGGAGAGGCC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTGTGCACGCGCAAGTaGTCCGTGAGCTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLCTRK*SVSLDC
Trigger: ACAATCCAAGCTCACGGAGCACTTGCGCGTGCACAG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCACCATCATTGCTCACTaGAGCCTTGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRTIIAH*SLDLPG
Trigger: CCCAGGGAGGTCAAGGCTGCAGTGAGCAATGATGGT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCGAGGGTGATGCCTTaGTCAGGCCTGAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTPRVMP*SGLKET
Trigger: TGTTTCCTTCAGGCCTGACCAAGGCATCACCCTCGG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCCGAGGGTGATGCCTTaGTCAGGCCTGAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRPRVMP*SGLKET
Trigger: TGTTTCCTTCAGGCCTGACCAAGGCATCACCCTCGG...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAGGCGGTGGCTGGGATaGGTCAGCTCGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDRRWLG*VSSCRK
Trigger: CTTCCGACACGAGCTGACCCATCCCAGCCACCGCCT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCCGTGCGCGTGCTGGTaGACCTGCAGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPPCACW*TCSRRR
Trigger: GCGCCGCCTGCTGCAGGTCCACCAGCACGCGCACGG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAGCAGCTGTCCCCTCTaGCGGAAGTTCCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDSSCPL*RKFLPH
Trigger: GTGTGGCAGGAACTTCCGTCAGAGGGGACAGCTGCT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAAACTCCTTGGCTCGTaGTCCTCCTGCCACGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDKLLGS*SSCHGL
Trigger: GAGGCCGTGGCAGGAGGATCACGAGCCAAGGAGTTT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATTCTGTACCCGAGGGCTaGTCCACGGCATCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDSVPEG*STASAS
Trigger: AGACGCAGATGCCGTGGAGCAGCCCTCGGGTACAGA...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGCAGGCTTCTCCCCCTaGTGCGGGAGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPAGFSP*CGRRWL
Trigger: CAGCCACCGCCTCCCGCAGCAGGGGGAGAAGCCTGC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAGAACGGCCTCTCCTTaGTGTGCGTGTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDRTASP*CACAGG
Trigger: CCCACCAGCACACGCACAGCAAGGAGAGGCCGTTCT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTTGGATGTCCCACTCTaGCTCAACTCCAATCGGCCT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLDVPL*LNSNRP
Trigger: AGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGCAGGCGGAAGCGCTTaGTGCAATGCGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDAGGSA*CNAHTG
Trigger: TCCAGTGTGCGCATTGCACCAAGCGCTTCCGCCTGC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTCCTGCTCAACGCTTTaGATGTCCCACTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTSCSTL*MSHSAS
Trigger: TGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCATTCTCTCCATTTCCTaGAGGGCTCTCCCCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCILSIS*RALPRV
Trigger: AACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAAT...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCCTCGAATGTGCTCCGTaGGTTTACACTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCLECAP*VYTAWR
Trigger: TCGCCAAGCAGTGTAAACTCACGGAGCACATTCGAG...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGCTTGGATTGTCTGGTaGAGCCCTTGCCACACTCCC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDAWIVW*SPCHTP
Trigger: GGGAGTGTGGCAAGGGCTTCACCAGACAATCCAAGC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCCTGAATTCATAGCCTaGTGGCTTCCCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTPEFIA*WLPQNS
Trigger: GCTGTTTTGGGGAAGCCAGCAGGCTATGAATTCAGG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCCCTCTGCGCCATGCTaGAGCGCCTCCGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPPSAPC*SASVSP
Trigger: AGGGGACACGGAGGCGCTGCAGCATGGCGCAGAGGG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGGTCTCTCCCCACCGTaGGCGTGCTGGTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPGLSPP*ACWWTC
Trigger: GCAGGTCCACCAGCACGCGCACGGTGGGGAGAGACC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGCTTGGCGAAGCCCTTaGCACACTTCCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDAWRSP*HTSCRR
Trigger: TCTCCTGCAGGAAGTGTGGCAAGGGCTTCGCCAAGC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTCCGTGAGTTTACACTaGTTGGCGAAGCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCSVSLH*LAKPLP
Trigger: TGGCAAGGGCTTCGCCAAGCAGTGTAAACTCACGGA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTGTGGACTCGAATGTaGTCCGTGAGTTTACACTGC +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTLWTRM*SVSLHC
Trigger: GCAGTGTAAACTCACGGAGCACATTCGAGTCCACAG...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGGCCTCTCCCCACCGTaGCGGAGCCGGTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKGLSPP*RSRWAL
Trigger: GAGAGCCCACCGGCTCCGGCACGGTGGGGAGAGGCC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTGTGCACTCTCAGGTaGTCACGGAGCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLCTLR*SRSLHW
Trigger: CCAGTGCAAGCTCCGTGAGCACCTGAGAGTGCACAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTGTGGATGCGCTGGTaGCTCAGCATGTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLWMRW*LSMCPL
Trigger: AAGGGGACACATGCTGAGGCACCAGCGCATCCACAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRGQYQS*STLWMS
Trigger: GGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTACAGGCCAAGGGTGCTaGGTGCTCTCCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPTGQGC*VLSQAG
Trigger: CCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGT...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGTCCGGTCCTTTGAGTaGCCTCTCTGGTGCATTACT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCVRSFE*PLWCIT
Trigger: AGTAATGCACCAGAGAGGCCACTCAAAGGACCGGAC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTTGGCTGTTCCCCTCCTaGGGCAGGCGCGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPWLFPS*GRREPG
Trigger: ACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCA...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCCGTGCCGGAGCCGGTaGGCTCTCAGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPPCRSR*ALSMLS
Trigger: GGAGAGCATGCTGAGAGCCCACCGGCTCCGGCACGG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGTCTACCAGCGGGTCTaGCTACTGTTGCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCVYQRV*LLLLWI
Trigger: AATCCACAGCAACAGTAGCCAGACCCGCTGGTAGAC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTGCCTTGGTCAGGCCTaGAGGAAACAAAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCCLGQA*RKQRIQ
Trigger: TTGGATCCTTTGTTTCCTTCAGGCCTGACCAAGGCA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGGCATCTCCCCGCTGTaGAGCAGCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPGISPL*SSWWAF
Trigger: GAAGGCCCACCAGCTGCTGCACAGCGGGGAGATGCC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGTTTCACAAAGCCCTTaGCGCACTCACAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCVSQSP*RTHRRK
Trigger: CTTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAAC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCGQYQS*STLWMS
Trigger: GGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTCATCCATACTGGAGTaGAGTGGCACCATCATTGCT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTSSILE*SGTIIA
Trigger: AGCAATGATGGTGCCACTGCACTCCAGTATGGATGA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTCATCCATACTGGAGTaGAGTGGCACCATCATTGCT +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRSSILE*SGTIIA
Trigger: AGCAATGATGGTGCCACTGCACTCCAGTATGGATGA...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGAATTCATAGCCTGCTaGCTTCCCCAAAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQREFIAC*LPQNSC
Trigger: ACAGCTGTTTTGGGGAAGCCAGCAGGCTATGAATTC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGGGCAGGCGCGAGCCTaGTTTCTGTCCCGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPGQARA*FLSRVH
Trigger: GTGCACTCGGGACAGAAACCAGGCTCGCGCCTGCCC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACCACCGTGCGCGTGCTaGTGGACCTGCAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKPPCAC*WTCSRR
Trigger: CCGCCTGCTGCAGGTCCACCAGCACGCGCACGGTGG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTGGCTACTGTTGCTGTaGATTCCTGGGCAATACCAA +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTWLLLL*IPGQYQ
Trigger: TTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATATTCTCTCCATTTCCTaGAGGGCTCTCCCCCGTGTT +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDILSIS*RALPRV
Trigger: AACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAAT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTCGAATGTGCTCCGTaGGTTTACACTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLECAP*VYTAWR
Trigger: TCGCCAAGCAGTGTAAACTCACGGAGCACATTCGAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGCAGGCTTCTCCCCCTaGTGCGGGAGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPAGFSP*CGRRWL
Trigger: CAGCCACCGCCTCCCGCAGCAGGGGGAGAAGCCTGC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACCCTCTGCGCCATGCTaGAGCGCCTCCGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKPSAPC*SASVSP
Trigger: AGGGGACACGGAGGCGCTGCAGCATGGCGCAGAGGG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATCCCCACCGTGCGCGTaGTGGTGGACCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKSPPCA*WWTCSR
Trigger: CCTGCTGCAGGTCCACCAGCACGCGCACGGTGGGGA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATTCCGTGAGTTTACACTaGTTGGCGAAGCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDSVSLH*LAKPLP
Trigger: TGGCAAGGGCTTCGCCAAGCAGTGTAAACTCACGGA...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCGGTCCTTTGAGTaGCCTCTCTGGTGCATTACT +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVRSFE*PLWCIT
Trigger: AGTAATGCACCAGAGAGGCCACTCAAAGGACCGGAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATCCCTCCCGGCTGTGCTaGCACCGGCGAGCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHPSRLC*HRRACV
Trigger: CACGCAGGCTCGCCGGTGCCAGCACAGCCGGGAGGG...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACCGAGTGCACACTGCTaGAGGCCCCGCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKPSAHC*RPRGLL
Trigger: GAGAAGGCCGCGGGGCCTCCAGCAGTGTGCACTCGG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATTCCTGCTCAACGCTTTaGATGTCCCACTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDSCSTL*MSHSAS
Trigger: TGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGA...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCCTATGTCATCCATACTaGAGTGCAGTGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCLCHPY*SAVAPS
Trigger: TGATGGTGCCACTGCACTCCAGTATGGATGACATAG...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGGCTTTTAGTTTTTCCTaGATTCATAGCCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTAFSFS*IHSLLA
Trigger: AGCCAGCAGGCTATGAATTCAGGAAAAACTAAAAGC...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGCAGGCCCTGATGGCTaGGCAGCTGCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPAGPDG*AAAPSG
Trigger: GCCTGAAGGCGCAGCTGCTCAGCCATCAGGGCCTGC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATGCTCACTGCAGCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKCSLQP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGTCAAGGCTGCAGTGAGCA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGCCAAGGGTGCTGGGTaGTCTCCCAGGCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPAKGAG*SPRRGR
Trigger: ACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCGAGTGGCCTCTCTGGTaGATTACTAAATGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCEWPLW*ITKWLF
Trigger: GAACAACCATTTAGTAATGCACCAGAGAGGCCACTC...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGGCACCGGCGAGCCTaGGTGCTGTCCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPWHRRA*VLSTGR
Trigger: CCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACTCCAGTATGCGCCCTaGAGGGGCTGGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLQYAP*RGWRAW
Trigger: CCAGGCTCGCCAGCCCCTGCAGGGCGCATACTGGAG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATCCCCACCGTGCGCGTaGTGGTGGACCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPSPPCA*WWTCSR
Trigger: CCTGCTGCAGGTCCACCAGCACGCGCACGGTGGGGA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTTTCACAAAGCCCTTaGCGCACTCACAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVSQSP*RTHRRK
Trigger: CTTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGCTGCGGGAGGCGGTaGCTGGGATGGGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPCCGRR*LGWVSS
Trigger: CGAGCTGACCCATCCCAGCCACCGCCTCCCGCAGCA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGGAGCGCTTGCCGCATaGGGTGCACTGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKGALAA*GALGRL
Trigger: AAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACTGCGTGCTGTCCACTaGGAGGGAGCGCTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKLRAVH*EGALAA
Trigger: TGCGGCAAGCGCTCCCTCCCAGTGGACAGCACGCAG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGGGCAGGCGCGAGCCTaGTTTCTGTCCCGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKGQARA*FLSRVH
Trigger: GTGCACTCGGGACAGAAACCAGGCTCGCGCCTGCCC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCTGTGCAGCAGCTGGTaGGCCTTCATGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPLCSSW*AFMSAF
Trigger: GAAGGCCGACATGAAGGCCCACCAGCTGCTGCACAG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTTGCTGTGGATTCCTaGGCAATACCAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVAVDS*AIPILL
Trigger: GAGCAGGATTGGTATTGCCCAGGAATCCACAGCAAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACAGACAGGCCAAGGGTaGTGGGTGCTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPQTGQG*WVLSQA
Trigger: CGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGCTTGCCGCATGGGGTaGACTGGGCAGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPACRMG*TGQASP
Trigger: GGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGTGTGCAGCCGCTGGTaGCGCAGCAGCTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHVCSRW*RSSCPL
Trigger: GAGGGGACAGCTGCTGCGGCACCAGCGGCTGCACAC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTGTGTACTCTGATGTaGTCCGCAAGCTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDVCTLM*SASLDL
Trigger: CAAGTCTAAGCTTGCGGAGCACATCAGAGTACACAC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGAATTCATAGCCTGCTaGCTTCCCCAAAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDEFIAC*LPQNSC
Trigger: ACAGCTGTTTTGGGGAAGCCAGCAGGCTATGAATTC...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGTGTGGGCCGCCAGATaGCGCAGCAGACACAGCTTC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKVWAAR*RSRHSF
Trigger: GAAGCTGTGTCTGCTGCGCCATCTGGCGGCCCACAC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGCGGGAGGCGGTGGCTaGGATGGGTCAGCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHAGGGG*DGSARV
Trigger: GACACGAGCTGACCCATCCCAGCCACCGCCTCCCGC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTGCTGCGGGAGGCGGTaGCTGGGATGGGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHCCGRR*LGWVSS
Trigger: CGAGCTGACCCATCCCAGCCACCGCCTCCCGCAGCA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATCCGAGTGCACACTGCTaGAGGCCCCGCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHPSAHC*RPRGLL
Trigger: GAGAAGGCCGCGGGGCCTCCAGCAGTGTGCACTCGG...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTGGCTGTTCCCCTCCTaGGGCAGGCGCGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHWLFPS*GRREPG
Trigger: ACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATCCGTGTCCCCTTCCTaGTGGCTGTTCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKSVSPS*WLFPSW
Trigger: CCAGGAGGGGAACAGCCACCAGGAAGGGGACACGGA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTTTTCCAATATAGCTaGGATCACGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLFQYS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCCCAGCTATATTGGAAAAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTATGTCATCCATACTaGAGTGCAGTGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLCHPY*SAVAPS
Trigger: TGATGGTGCCACTGCACTCCAGTATGGATGACATAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTGCTCACTGCAGCCTTaGCCTCCCTGGGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHCSLQP*PPWAQA
Trigger: CGCCTGAGCCCAGGGAGGTCAAGGCTGCAGTGAGCA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCAAACCTGGATCAAAATaGATATCAACAGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRKPGSK*ISTEEQ
Trigger: TTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACTGCTCCACGGCATCTaGGTCTCCGCCCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKLLHGI*VSALLL
Trigger: CAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGGTGGGCCTTCAGGATaGCCTTCAGGCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPGGPSG*PSGGSA
Trigger: AGCGCTTCCGCCTGAAGGGCATCCTGAAGGCCCACC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGGCCTCTCCTTGCTGTaGGTGTGCTGGTGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPGLSLL*VCWWAF
Trigger: GAAGGCCCACCAGCACACGCACAGCAAGGAGAGGCC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTACCATCATTGCTCACTaGAGCCTTGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPTIIAH*SLDLPG
Trigger: CCCAGGGAGGTCAAGGCTGCAGTGAGCAATGATGGT...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGGCGTCGTGTCTCTGTaGGCTCCCGAGGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHGVVSL*APEGDA
Trigger: GGCATCACCCTCGGGAGCCCACAGAGACACGACGCC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATCTGCGTGCTGTCCACTaGGAGGGAGCGCTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHLRAVH*EGALAA
Trigger: TGCGGCAAGCGCTCCCTCCCAGTGGACAGCACGCAG...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACTGTGCAGCAGCTGGTaGGCCTTCATGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKLCSSW*AFMSAF
Trigger: GAAGGCCGACATGAAGGCCCACCAGCTGCTGCACAG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCAATGTCCAGTTCATTTaGAGCAGGACAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCNVQFI*SRTGFC
Trigger: ACAAAATCCTGTCCTGCTCCAAATGAACTGGACATT...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCATCATTGCAAACAGTTaGCTGAGCCTTTTCTTAATG +
Preference number: 4 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRIIANS*LSLFLM
Trigger: CATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGAT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAAGCAGCTGTCCCCTCTaGCGGAAGTTCCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPSSCPL*RKFLPH
Trigger: GTGTGGCAGGAACTTCCGTCAGAGGGGACAGCTGCT...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATCTCGGGCCTGTGGATaGGCTGGTGCCTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPSRACG*AGASAC
Trigger: ACATGCTGAGGCACCAGCGCATCCACAGGCCCGAGA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCCTGTTCCTCAAAACCTaGATCAAAATGCATATCAAC +
Preference number: 4 (lower is better)
Translates to: VDSWAIPILLNALDVPLCLFLKT*IKMHIN
Trigger: GTTGATATGCATTTTGATCCAGGTTTTGAGGAACAG...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATTTTGAGTGGCCTCTCTaGTGCATTACTAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: ATVAVDSWAIPILLNALDFEWPL*CITKWL
Trigger: CAACCATTTAGTAATGCACCAGAGAGGCCACTCAAA...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATAGGCGGTGGCTGGGATaGGTCAGCTCGTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHRRWLG*VSSCRK
Trigger: CTTCCGACACGAGCTGACCCATCCCAGCCACCGCCT...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACTGTGCGTGTGCTGGTaGGCCTTCAGGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLCVCW*AFRMPF
Trigger: GAAGGGCATCCTGAAGGCCCACCAGCACACGCACAG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATTGCTGTGCGTGTGCTaGTGGGCCTTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLLCVC*WAFRMP
Trigger: GGGCATCCTGAAGGCCCACCAGCACACGCACAGCAA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGGCCTGTGGATGCGCTaGTGCCTCAGCATGTGTCCC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHGLWMR*CLSMCP
Trigger: GGGACACATGCTGAGGCACCAGCGCATCCACAGGCC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATCTCCGCCCTCTTGTTaGATTTCTCCCAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKSPPSC*ISPRPY
Trigger: GTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATAGAACGGCCTCTCCTTaGTGTGCGTGTGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHRTASP*CACAGG
Trigger: CCCACCAGCACACGCACAGCAAGGAGAGGCCGTTCT...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATCGGAGCTTGCACTGGTaGGTGAAGCCTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHRSLHW*VKPLPH
Trigger: GTGTGGCAGAGGCTTCACCCACCAGTGCAAGCTCCG...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATCACGGAGCTTGCACTaGTGGGTGAAGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPSRSLH*WVKPLP
Trigger: TGGCAGAGGCTTCACCCACCAGTGCAAGCTCCGTGA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATCTCCGCCCTCTTGTTaGATTTCTCCCAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPSPPSC*ISPRPY
Trigger: GTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGCTTGGATTGTCTGGTaGAGCCCTTGCCACACTCCC +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHAWIVW*SPCHTP
Trigger: GGGAGTGTGGCAAGGGCTTCACCAGACAATCCAAGC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACTGTGCACGCGCAAGTaGTCCGTGAGCTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLCTRK*SVSLDC
Trigger: ACAATCCAAGCTCACGGAGCACTTGCGCGTGCACAG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACCTGAATTCATAGCCTaGTGGCTTCCCCAAAACAGC +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKPEFIA*WLPQNS
Trigger: GCTGTTTTGGGGAAGCCAGCAGGCTATGAATTCAGG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGAGTGGCCTCTCTGGTaGATTACTAAATGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPEWPLW*ITKWLF
Trigger: GAACAACCATTTAGTAATGCACCAGAGAGGCCACTC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTCTGACGGAAGTTCCTaGCACACTTGGCACACCGGA +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHSDGSS*HTWHTG
Trigger: TCCGGTGTGCCAAGTGTGGCAGGAACTTCCGTCAGA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATTGGATGTCCCACTCTaGCTCAACTCCAATCGGCCT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLDVPL*LNSNRP
Trigger: AGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGTCTACCAGCGGGTCTaGCTACTGTTGCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPVYQRV*LLLLWI
Trigger: AATCCACAGCAACAGTAGCCAGACCCGCTGGTAGAC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR TCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGCTTTTAGTTTTTCCTaGATTCATAGCCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPAFSFS*IHSLLA
Trigger: AGCCAGCAGGCTATGAATTCAGGAAAAACTAAAAGC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGTGTGTACTCTGATGTaGTCCGCAAGCTTAGACTTG +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKVCTLM*SASLDL
Trigger: CAAGTCTAAGCTTGCGGAGCACATCAGAGTACACAC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACATGCCTCTAGATCCTaGCATTCTTGCTCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPHASRS*HSCSEK
Trigger: TTTCTCCGAGCAAGAATGGCAGGATCTAGAGGCATG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCGAGAGTCTCATAATTaGTTCTCATCACATGCTTGT +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPRESHN*FSSHAC
Trigger: ACAAGCATGTGATGAGAAGCAATTATGAGACTCTCG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTGGCTACTGTTGCTGTaGATTCCTGGGCAATACCAA +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHWLLLL*IPGQYQ
Trigger: TTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTTTCATATTCCTAACTTaGATGACACTCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPFIFLT*MTLLLK
Trigger: TTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAA...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTGAAATTGTTTTCGTTTaGAGATGCCTCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPEIVFV*RCLLFH
Trigger: ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTC...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAGATCCAAAGGAACACTaGCTTTCAGGATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPDPKEH*LSGSNW
Trigger: CCAATTAGATCCTGAAAGCCAGTGTTCCTTTGGATC...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGGTGCATTACTAAATaGTTGTTCTCCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPWCITK*LFSQQL
Trigger: AAGCTGTTGGGAGAACAACCATTTAGTAATGCACCA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAAAACCTGGATCAAAATaGATATCAACAGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPKPGSK*ISTEEQ
Trigger: TTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTT...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR GCA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGAAATTGTTTTCGTTTaGAGATGCCTCCTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKEIVFV*RCLLFH
Trigger: ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATTGGTGCATTACTAAATaGTTGTTCTCCCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHWCITK*LFSQQL
Trigger: AAGCTGTTGGGAGAACAACCATTTAGTAATGCACCA...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATAATGTCCAGTTCATTTaGAGCAGGACAGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHNVQFI*SRTGFC
Trigger: ACAAAATCCTGTCCTGCTCCAAATGAACTGGACATT...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CCA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAATCATTGCAAACAGTTaGCTGAGCCTTTTCTTAATG +
Preference number: 4 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPIIANS*LSLFLM
Trigger: CATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGAT...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp GCCCCGCGGCCTTCTCTCCAAGAGGCCGGCCCCTCCCGGCTGTGCTaGCACCGGCGAGCCTGCGTGCTGTCCACTGGGAGGGAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: APRPSLQEAGPSRLC*HRRACVLSTGRERL
Trigger: CAAGCGCTCCCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCAGCACAGCCGGGAGGGGCCGGCCTCTTGGAGAGAAGGCCGCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp GAGCCTGCGTGCTGTCCACTGGGAGGGAGCGCTTGCCGCATGGGGTaGACTGGGCAGGCTTCTCCCCCTGCTGCGGGAGGCGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: EPACCPLGGSACRMG*TGQASPPAAGGGGW
Trigger: CCAGCCACCGCCTCCCGCAGCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGTGGACAGCACGCAGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp TGCTGCAGCGCCTCCGTGTCCCCTTCCTGGTGGCTGTTCCCCTCCTaGGGCAGGCGCGAGCCTGGTTTCTGTCCCGAGTGCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: CCSASVSPSWWLFPS*GRREPGFCPECTLL
Trigger: CAGCAGTGTGCACTCGGGACAGAAACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCACCAGGAAGGGGACACGGAGGCGCTGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS TCA 90 bp GTACCCGAGGGCTGCTCCACGGCATCTGCGTCTCCGCCCTCTTGTTaGATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: VPEGCSTASASPPSC*ISPRPYVSGPLSGL
Trigger: GAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAGCCCTCGGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp TGGTTGTTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTGCTaGGTGCTCTCCCAGGCGGGGACGTCCCACAAACCAGGAAGATCC +
Preference number: 5 (lower is better)
Translates to: WLFSQQLSPQTGQGC*VLSQAGTSHKPGRS
Trigger: GGATCTTCCTGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp TGTTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTGCTGGGTaGTCTCCCAGGCGGGGACGTCCCACAAACCAGGAAGATCCAGAT +
Preference number: 5 (lower is better)
Translates to: CSPNSFPRRQAKGAG*SPRRGRPTNQEDPD
Trigger: ATCTGGATCTTCCTGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCACTGGGAGGGAGCGCTaGCCGCATGGGGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRTGRER*PHGVHW
Trigger: CCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp AAATGGTTGTTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTaGTGGGTGCTCTCCCAGGCGGGGACGTCCCACAAACCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: KWLFSQQLSPQTGQG*WVLSQAGTSHKPGR
Trigger: TCTTCCTGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTGTCTGGTGAAGCCCTaGCCACACTCCCCGCACGAG +
Preference number: 5 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTCLVKP*PHSPHE
Trigger: CTCGTGCGGGGAGTGTGGCAAGGGCTTCACCAGACA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGTGCGTCTCCGCCCTCTaGTTGAATTTCTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTCVSAL*LNFSQA
Trigger: GGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCA...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCCCACTCTGCCTCAACTCCAATCGGC +
Preference number: 5 (lower is better)
Translates to: RVWLLLLWIPGQYQS*STLWMSHSASTPIG
Trigger: GCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp CTACGTGTCCGGTCCTTTGAGTGGCCTCTCTGGTGCATTACTAAATaGTTGTTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTGC +
Preference number: 5 (lower is better)
Translates to: LRVRSFEWPLWCITK*LFSQQLSPQTGQGC
Trigger: GCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTGCGTCTCCGCCCTCTaGTTGAATTTCTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VDSWAIPILLNALDVPLCCVSAL*LNFSQA
Trigger: GGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCGTGAGTTTACACTGCTaGGCGAAGCCCTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRVSLHC*AKPLPH
Trigger: GTGTGGCAAGGGCTTCGCCAAGCAGTGTAAACTCAC...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGAAGTTCCTGCCACACTaGGCACACCGGAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTKFLPH*AHRKGF
Trigger: GAAGCCTTTCCGGTGTGCCAAGTGTGGCAGGAACTT...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCATCCTGCTCAACGCTTaGGATGTCCCACTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GSGYCCCGFLGNTNPAQRILLNA*DVPLCL
Trigger: GAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGAT...GCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp TTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTGGCCTCTCTGGTaGATTACTAAATGGTTGTTCTCCCAACAGCTTTCCCCGCAGACA +
Preference number: 5 (lower is better)
Translates to: FSQALRVRSFEWPLW*ITKWLFSQQLSPQT
Trigger: TGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAGGTGCTCACGGAGCTaGCACTGGTGGGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ATVAVDSWAIPILLNALDRCSRS*HWWVKP
Trigger: AGGCTTCACCCACCAGTGCAAGCTCCGTGAGCACCT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp AATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTGGCCTCTCTaGTGCATTACTAAATGGTTGTTCTCCCAACAGCTTTCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: NFSQALRVRSFEWPL*CITKWLFSQQLSPQ
Trigger: CTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATCTCCGTGAGCTTGGATaGTCTGGTGAAGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: ATVAVDSWAIPILLNALDLRELG*SGEALA
Trigger: GGCAAGGGCTTCACCAGACAATCCAAGCTCACGGAG...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp CTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTaGATGTCCCACTCTGCCTCAACTCCAATCGGCCTCTATCATTGC +
Preference number: 5 (lower is better)
Translates to: LLLWIPGQYQSCSTL*MSHSASTPIGLYHC
Trigger: GCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATAAGTGCTCCGTGAGCTaGGATTGTCTGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: ATVAVDSWAIPILLNALDKCSVS*DCLVKP
Trigger: GGGCTTCACCAGACAATCCAAGCTCACGGAGCACTT...ATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTGTTTCACAAAGCCCTaGCCGCACTCACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VDSWAIPILLNALDVPLCCFTKP*PHSQEK
Trigger: TTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAACA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 90 bp CTCTTGTTGAATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTaGCCTCTCTGGTGCATTACTAAATGGTTGTTCTCCCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: LLLNFSQALRVRSFE*PLWCITKWLFSQQL
Trigger: AAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CGGGTCTGGCTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGATATTAGTTCTGGTTTaGGAAGTCCATCATCCGAGG +
Preference number: 5 (lower is better)
Translates to: RVWLLLLWIPGQYQSCSTILVLV*EVHHPR
Trigger: CCTCGGATGATGGACTTCCAAAACCAGAACTAATAT...CGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAGCCAGACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316286.13
CDS CCA 90 bp CCCACTCTGCCTCAACTCCAATCGGCCTCTATCATTGCAAACAGTTaGCTGAGCCTTTTCTTAATGTCCAGTTCATTTGGAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: PTLPQLQSASIIANS*LSLFLMSSSFGAGQ
Trigger: CTGTCCTGCTCCAAATGAACTGGACATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp GTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTGCTGCATTACTAAATGGTaGTTCTCCCAACAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: VDSWAIPILLNALDVPLCCITKW*FSQQLS
Trigger: GGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCA...GCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATACTGGGAGGGAGCGCTaGCCGCATGGGGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHTGRER*PHGVHW
Trigger: CCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGT...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACGCAGGCGGAAGCGCTaGGTGCAATGCGCACACTGG +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPRRRKR*VQCAHW
Trigger: CCAGTGTGCGCATTGCACCAAGCGCTTCCGCCTGCG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCTGGTCTCAAACTCCTaGGCTCGTGATCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPLVSNS*ARDPPA
Trigger: GGCAGGAGGATCACGAGCCAAGGAGTTTGAGACCAG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATGCTTGGCGAAGCCCTaGCCACACTTCCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKCLAKP*PHFLQE
Trigger: CTCCTGCAGGAAGTGTGGCAAGGGCTTCGCCAAGCA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGTCTGGTGAAGCCCTaGCCACACTCCCCGCACGAG +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPCLVKP*PHSPHE
Trigger: CTCGTGCGGGGAGTGTGGCAAGGGCTTCACCAGACA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAGTGCTCCGTGAGCTaGGATTGTCTGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPKCSVS*DCLVKP
Trigger: GGGCTTCACCAGACAATCCAAGCTCACGGAGCACTT...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 90 bp CTTTGGATGTCCCACTCTGCCTCAACTCCAATCGGCCTCTATCATTaGAAACAGTTGGCTGAGCCTTTTCTTAATGTCCAGTTCATTTGG +
Preference number: 5 (lower is better)
Translates to: LWMSHSASTPIGLYH*KQLAEPFLNVQFIW
Trigger: CCAAATGAACTGGACATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGCTTGGCGAAGCCCTaGCCACACTTCCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPCLAKP*PHFLQE
Trigger: CTCCTGCAGGAAGTGTGGCAAGGGCTTCGCCAAGCA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAAGGTGCTCACGGAGCTaGCACTGGTGGGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPRCSRS*HWWVKP
Trigger: AGGCTTCACCCACCAGTGCAAGCTCCGTGAGCACCT...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAACTCCGTGAGCTTGGATaGTCTGGTGAAGCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKLRELG*SGEALA
Trigger: GGCAAGGGCTTCACCAGACAATCCAAGCTCACGGAG...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATACGTGTCCGGTCCTTaGAGTGGCCTCTCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPYVSGP*SGLSGA
Trigger: TGCACCAGAGAGGCCACTCAAAGGACCGGACACGTA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAGTCTCCGCCCTCTTGTaGAATTTCTCCCAGGCCCTA +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKVSALL*NFSQAL
Trigger: TAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGAC...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAAAGTTCCTGCCACACTaGGCACACCGGAAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKKFLPH*AHRKGF
Trigger: GAAGCCTTTCCGGTGTGCCAAGTGTGGCAGGAACTT...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCACTGGTCTCAAACTCCTaGGCTCGTGATCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPLVSNS*ARDPPA
Trigger: GGCAGGAGGATCACGAGCCAAGGAGTTTGAGACCAG...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATGTGAGTTTACACTGCTaGGCGAAGCCCTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHVSLHC*AKPLPH
Trigger: GTGTGGCAAGGGCTTCGCCAAGCAGTGTAAACTCAC...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATCACATATAACCTCGTAGAAATTGTTTTCGTTTGCAGATGCCTCCTTTTTCATATCCTGCTCAACGCTTaGGATGTCCCACTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ITYNLVEIVFVCRCLLFHILLNA*DVPLCL
Trigger: GAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGAT...ATGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCTACGAGGTTATATGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCATGTTTCACAAAGCCCTaGCCGCACTCACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPCFTKP*PHSQEK
Trigger: TTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAACA...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp CTTCATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTCTTCATATTCCTAACTaGCATGACACTCTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: LHIPNLHDTLAQRRIPAPLHIPN*HDTLAQ
Trigger: TTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG...AGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAATGCATTACTAAATGGTaGTTCTCCCAACAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKCITKW*FSQQLS
Trigger: GGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCA...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATATTCCTAACTTGCATGACACTCTTGCTCAAAGAAGGATACCTGCTCCTAAAAAGAAATTGTTTTCGTTaGCAGATGCCTCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: IFLTCMTLLLKEGYLLLKRNCFR*QMPPFS
Trigger: TGAAAAAGGAGGCATCTGCAAACGAAAACAATTTCT...TTTTAGGAGCAGGTATCCTTCTTTGAGCAAGAGTGTCATGCAAGTTAGGAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS-3UTR CAA 90 bp ATTATGTCCTTGTTTTATAATGCTGTCTTTTCCAATATAGCTGGGATCACGCCAATATTAGTTCTGGTTTaGGAAGTCCATCATCTAGAG +
Preference number: 5 (lower is better)
Translates to: IMSLFYNAVFSNIAGITPILVLV*EVHHLE
Trigger: CTCTAGATGATGGACTTCCAAAACCAGAACTAATAT...TGGCGTGATCCCAGCTATATTGGAAAAGACAGCATTATAAAACAAGGACATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491431.2
CDS CAA 90 bp TGCTGGCACCGGCGAGCCTGCGTGCTGTCCACTGGGAGGGAGCGCTaGCCGCATGGGGTGCACTGGGCAGGCTTCTCCCCCTGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: CWHRRACVLSTGRER*PHGVHWAGFSPCCG
Trigger: CCCGCAGCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp CCTTCTCTCCAAGAGGCCGGCCCCTCCCGGCTGTGCTaGCACCGGCGAGCCTGCGTGCTGTCCACTGGGAGG +
Preference number: 6 (lower is better)
Translates to: PSLQEAGPSRLC*HRRACVLSTGR
Trigger: CCTCCCAGTGGACAGCACGCAGGCTCGCCGGTGCCAGCACAGCCGGGAGGGGCCGGCCTCTTGGAGAGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp TGCTGTCCACTGGGAGGGAGCGCTTGCCGCATGGGGTaGACTGGGCAGGCTTCTCCCCCTGCTGCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: CCPLGGSACRMG*TGQASPPAAGG
Trigger: GCCTCCCGCAGCAGGGGGAGAAGCCTGCCCAGTGCACCCCATGCGGCAAGCGCTCCCTCCCAGTGGACAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp CCACACTCCGAGCAGGAGCAGGGCCCCTCTGCGCCATaGTGCAGCGCCTCCGTGTCCCCTTCCTGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: PHSEQEQGPSAP*CSASVSPSWWL
Trigger: CAGCCACCAGGAAGGGGACACGGAGGCGCTGCAGCATGGCGCAGAGGGGCCCTGCTCCTGCTCGGAGTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp CTGGTGGCTGTTCCCCTCCTGGGGCAGGCGCGAGCCTaGTTTCTGTCCCGAGTGCACACTGCTGGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: LVAVPLLGQARA*FLSRVHTAGGP
Trigger: GGGGCCTCCAGCAGTGTGCACTCGGGACAGAAACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp GCCTCCGTGTCCCCTTCCTGGTGGCTGTTCCCCTCCTaGGGCAGGCGCGAGCCTGGTTTCTGTCCCGAGTGC +
Preference number: 6 (lower is better)
Translates to: ASVSPSWWLFPS*GRREPGFCPEC
Trigger: GCACTCGGGACAGAAACCAGGCTCGCGCCTGCCCCAGGAGGGGAACAGCCACCAGGAAGGGGACACGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp TCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTGCTaGGTGCTCTCCCAGGCGGGGACGTCCCACAAACCA +
Preference number: 6 (lower is better)
Translates to: SQQLSPQTGQGC*VLSQAGTSHKP
Trigger: TGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp AACAGCTTTCCCCGCAGACAGGCCAAGGGTGCTGGGTaGTCTCCCAGGCGGGGACGTCCCACAAACCAGGAA +
Preference number: 6 (lower is better)
Translates to: NSFPRRQAKGAG*SPRRGRPTNQE
Trigger: TTCCTGGTTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp TTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTaGTGGGTGCTCTCCCAGGCGGGGACGTCCCACAAA +
Preference number: 6 (lower is better)
Translates to: FSQQLSPQTGQG*WVLSQAGTSHK
Trigger: TTTGTGGGACGTCCCCGCCTGGGAGAGCACCCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CAA 90 bp TGTACCCGAGGGCTGCTCCACGGCATCTGCGTCTCCGCCCTCTTGTaGAATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: CTRGLLHGICVSALL*NFSQALRVRSFEWP
Trigger: AGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAGCCCTCGGGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS TCA 72 bp GGCTGCTCCACGGCATCTGCGTCTCCGCCCTCTTGTTaGATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: GCSTASASPPSC*ISPRPYVSGPL
Trigger: CAAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CAA 72 bp GGGCTGCTCCACGGCATCTGCGTCTCCGCCCTCTTGTaGAATTTCTCCCAGGCCCTACGTGTCCGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: GLLHGICVSALL*NFSQALRVRSF
Trigger: AAAGGACCGGACACGTAGGGCCTGGGAGAAATTCAACAAGAGGGCGGAGACGCAGATGCCGTGGAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp CTGTGCACTCTCAGGTGCTCACGGAGCTTGCACTGGTaGGTGAAGCCTCTGCCACACTCGCTACAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LCTLRCSRSLHW*VKPLPHSLQEN
Trigger: GTTCTCCTGTAGCGAGTGTGGCAGAGGCTTCACCCACCAGTGCAAGCTCCGTGAGCACCTGAGAGTGCACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CAA 90 bp CGTGTCCGGTCCTTTGAGTGGCCTCTCTGGTGCATTACTAAATGGTaGTTCTCCCAACAGCTTTCCCCGCAGACAGGCCAAGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RVRSFEWPLWCITKW*FSQQLSPQTGQGCW
Trigger: CCAGCACCCTTGGCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp GCGTCGTGTCTCTGTGGGCTCCCGAGGGTGATGCCTTaGTCAGGCCTGAAGGAAACAAAGGATCCAAAGGAA +
Preference number: 6 (lower is better)
Translates to: ASCLCGLPRVMP*SGLKETKDPKE
Trigger: TTCCTTTGGATCCTTTGTTTCCTTCAGGCCTGACCAAGGCATCACCCTCGGGAGCCCACAGAGACACGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp CGGTCCTTTGAGTGGCCTCTCTGGTGCATTACTAAATaGTTGTTCTCCCAACAGCTTTCCCCGCAGACAGGC +
Preference number: 6 (lower is better)
Translates to: RSFEWPLWCITK*LFSQQLSPQTG
Trigger: GCCTGTCTGCGGGGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp TGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTTaGATGTCCCACTCTGCCTCAACTCCAATCGGCCTC +
Preference number: 6 (lower is better)
Translates to: WIPGQYQSCSTL*MSHSASTPIGL
Trigger: GAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CAA 72 bp ATGTGCTCGATGAGCTTTGAGTGTTTCACAAAGCCCTaGCCGCACTCACAGGAGAAAGGCATCTCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: MCSMSFECFTKP*PHSQEKGISPL
Trigger: CAGCGGGGAGATGCCTTTCTCCTGTGAGTGCGGCAAGGGCTTTGTGAAACACTCAAAGCTCATCGAGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp GCCCTACGTGTCCGGTCCTTTGAGTGGCCTCTCTGGTaGATTACTAAATGGTTGTTCTCCCAACAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: ALRVRSFEWPLW*ITKWLFSQQLS
Trigger: GGAAAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp CAGGCCCTACGTGTCCGGTCCTTTGAGTGGCCTCTCTaGTGCATTACTAAATGGTTGTTCTCCCAACAGCTT +
Preference number: 6 (lower is better)
Translates to: QALRVRSFEWPL*CITKWLFSQQL
Trigger: AAGCTGTTGGGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CAA 90 bp ACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTGCTCAACGCTTaGGATGTCCCACTCTGCCTCAACTCCAATCGGCCTCTATCATTG +
Preference number: 6 (lower is better)
Translates to: TVAVDSWAIPILLNA*DVPLCLNSNRPLSL
Trigger: CAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp CTACTGTTGCTGTGGATTCCTGGGCAATACCAATCCTaGTCAACGCTTTGGATGTCCCACTCTGCCTCAACT +
Preference number: 6 (lower is better)
Translates to: LLLLWIPGQYQS*STLWMSHSAST
Trigger: AGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTATTGCCCAGGAATCCACAGCAACAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp AATTTCTCCCAGGCCCTACGTGTCCGGTCCTTTGAGTaGCCTCTCTGGTGCATTACTAAATGGTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: NFSQALRVRSFE*PLWCITKWLFS
Trigger: GGAGAACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGTAGGGCCTGGGAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp TCCCACTCTGCCTCAACTCCAATCGGCCTCTATCATTaGAAACAGTTGGCTGAGCCTTTTCTTAATGTCCAG +
Preference number: 6 (lower is better)
Translates to: SHSASTPIGLYH*KQLAEPFLNVQ
Trigger: CTGGACATTAAGAAAAGGCTCAGCCAACTGTTTGCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS GCA 72 bp ATACCAATCCTGCTCAACGCTTTGGATGTCCCACTCTaGCTCAACTCCAATCGGCCTCTATCATTGCAAACA +
Preference number: 6 (lower is better)
Translates to: IPILLNALDVPL*LNSNRPLSLQT
Trigger: TGTTTGCAATGATAGAGGCCGATTGGAGTTGAGGCAGAGTGGGACATCCAAAGCGTTGAGCAGGATTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2
CDS CCA 72 bp TCAGGCCTGAAGGAAACAAAGGATCCAAAGGAACACTaGCTTTCAGGATCTAATTGGAAATGGCTTTTAGTT +
Preference number: 6 (lower is better)
Translates to: SGLKETKDPKEH*LSGSNWKWLLV
Trigger: AACTAAAAGCCATTTCCAATTAGATCCTGAAAGCCAGTGTTCCTTTGGATCCTTTGTTTCCTTCAGGCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316286.13
ENST00000491431.2