RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZNF784 (Homo sapiens)

Ensembl gene IDs: ENSG00000179922

Ensembl transcript IDs: ENST00000325351.5, ENST00000591479.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGAGGTaGCCGGCTCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCG +
Preference number: 1 (lower is better)
Translates to: ASVLQRPLCPEASER*PAPPRAGAGAGAGA
Trigger: CGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGAGCCGGGCACCTCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 90 bp GCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTaGCGCAGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCCG +
Preference number: 1 (lower is better)
Translates to: ARARGLACLRSGGRA*RRTCRQKASPPLRP
Trigger: CGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 90 bp TCCGGGGGCTCAGGGACCAGCGTGGTGTCCGTCACCTTCACCACCTaGATCTCGATGAGGTCACTCGGGGGTGTGCCAGGCCGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: SGGSGTSVVSVTFTT*ISMRSLGGVPGRQS
Trigger: TGACTGCCGGCCTGGCACACCCCCGAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGACGGACACCACGCTGGTCCCTGAGCCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 90 bp CCCACCACAGTGACTCTTTCACTCCACACCCAGGCCAGCCCACCATaGTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGC +
Preference number: 1 (lower is better)
Translates to: PTTVTLSLHTQASPP*CHQPARPWDWRGLG
Trigger: GCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTCACTGTGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp CCTCTCCTAGGCCTGGCAGAGGTGCTGTGTGGGCGTGTGGGAGTCTaGAGCCTGGCCCTCTCCCTCTGCTCTCCATCACTAGCGGCTCAC +
Preference number: 1 (lower is better)
Translates to: PLLGLAEVLCGRVGV*SLALSLCSPSLAAH
Trigger: GTGAGCCGCTAGTGATGGAGAGCAGAGGGAGAGGGCCAGGCTCCAGACTCCCACACGCCCACACAGCACCTCTGCCAGGCCTAGGAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 90 bp AGCAGCTCGGAAACCAGCCGGAAGGCAGCAGGGCACAAGGCACAGTaGAAAGAACCTGGCTCCGGGGGCTCAGGGACCAGCGTGGTGTCC +
Preference number: 1 (lower is better)
Translates to: SSSETSRKAAGHKAQ*KEPGSGGSGTSVVS
Trigger: GGACACCACGCTGGTCCCTGAGCCCCCGGAGCCAGGTTCTTTCCACTGTGCCTTGTGCCCTGCTGCCTTCCGGCTGGTTTCCGAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 90 bp TCCCCGGGTCGGCCTCGTACCTCCGCCTTAACTAACCCATGTCCCTaGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACCTTCGCGGTC +
Preference number: 1 (lower is better)
Translates to: SPGRPRTSALTNPCP*SAAYWSASTFTFAV
Trigger: GACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGGACATGGGTTAGTTAAGGCGGAGGTACGAGGCCGACCCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 90 bp ACCACAGTGACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTaGCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGT +
Preference number: 1 (lower is better)
Translates to: TTVTLSLHTQASPPC*HQPARPWDWRGLGS
Trigger: ACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTCACTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp GGACAAGCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGC +
Preference number: 1 (lower is better)
Translates to: GQANQETVGEVTSSP*ALPLAAHPQSCKSC
Trigger: GCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 90 bp CAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTaGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: QASPPCCHQPARPWD*RGLGSKLFASNWEW
Trigger: CCACTCCCAGTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp CACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTaGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTGG +
Preference number: 1 (lower is better)
Translates to: HTQASPPCCHQPARP*DWRGLGSKLFASNW
Trigger: CCAGTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR TCA 90 bp TGGGTCTTGCACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGA +
Preference number: 1 (lower is better)
Translates to: WVLHKDKPTKRQSGK*HPARGPCLWPHTRR
Trigger: TCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGTGCAAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 90 bp ATCCTGGCTCCTCCTCTGAAGTGCCCAGGCTCTGTCGTGACAGGCTaGGTCTTGCACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAG +
Preference number: 1 (lower is better)
Translates to: ILAPPLKCPGSVVTG*VLHKDKPTKRQSGK
Trigger: CTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAGAGGAGGAGCCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 90 bp GGTCAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTaGGGACCCTCTGGCTTTGAGGTGATGGGATCCCAGAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: GQAYILEAQVLSAVT*GPSGFEVMGSQSLF
Trigger: GAAGAGACTCTGGGATCCCATCACCTCAAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp CCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTaGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTTAC +
Preference number: 1 (lower is better)
Translates to: PPKKSGWVKDGPQWG*GLPLLESRSYGQAY
Trigger: GTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp CAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATaGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAG +
Preference number: 1 (lower is better)
Translates to: QLPPKKSGWVKDGPQ*GWGLPLLESRSYGQ
Trigger: CTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR TCA 90 bp GTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTTACATCCTTaGGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTGGCTT +
Preference number: 1 (lower is better)
Translates to: VAAVGVKILWSGLHP*GSSALSGDLGTLWL
Trigger: AAGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp GATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCCGCTGTTaGAGTCAAGATCCTATGGTCAGGCTTACATCCTTGAGGCTCAAG +
Preference number: 1 (lower is better)
Translates to: DGLRTDHNGGGGCRC*SQDPMVRLTSLRLK
Trigger: CTTGAGCCTCAAGGATGTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp GCTGCTTGCTTTATGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATaGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCCGCTGTTG +
Preference number: 1 (lower is better)
Translates to: AACFMCSQLPPKKSG*VKDGPQWGWGLPLL
Trigger: CAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACATAAAGCAAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR GCA 90 bp AGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTaGCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTTACATCCTTG +
Preference number: 1 (lower is better)
Translates to: RRVDGLRTDHNGGGG*RCWSQDPMVRLTSL
Trigger: CAAGGATGTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp GATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTGGGAGTaGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGG +
Preference number: 1 (lower is better)
Translates to: DWRGLGSKLFASNWE*RKLEKPEATLRLVG
Trigger: CCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 90 bp CCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTaGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTT +
Preference number: 1 (lower is better)
Translates to: PWDWRGLGSKLFASN*EWRKLEKPEATLRL
Trigger: AAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGCCAGCCCGTGGGCCTTaGCTTTGGCCGCACACCCGC +
Preference number: 2 (lower is better)
Translates to: STPCRCWCRSRGAKALKAPARGP*LWPHTR
Trigger: GCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGG...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR TCA 90 bp GTGTGCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTGGCGGGGGCGCCAAGGCCTTaGAGGCGCGGGGGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: VCTRSWSRMSEERRKGLAGAPRP*RRGGRA
Trigger: CGCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCC...CGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR CCA 90 bp CTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: LSGATPGLCSATAAVSGGVTSSP*ALPLAA
Trigger: TGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCAC...GCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCACCAGCCCGTGGGCCTTaGCTTTGGCCGCACACCCGC +
Preference number: 2 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAPARGP*LWPHTR
Trigger: GCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGG...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCTGTGGCCGCACACGTaGCACCGGCTCGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPLWPHT*HRLGSP
Trigger: TGGGGACCCGAGCCGGTGCCACGTGTGCGGCCACAG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CAA 90 bp TGCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTaGGCGCAGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCC +
Preference number: 2 (lower is better)
Translates to: CTRSWSRMSEERRKG*AQNLQAKGFPTAAP
Trigger: GGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCAGGCCAGCCCACCATaGTGCCATCAGCCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPQASPP*CHQPAR
Trigger: GCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp GTGTGCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTGGCGCGTGGGCCTTGCCTTTaGCCGCACACCCGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: VCTRSWSRMSEERRKGLARGPCL*PHTRRA
Trigger: AGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACG...CGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR TCA 90 bp CCCTGGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACCTTCGCGGTCTCCCCCAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PWSAAYWSASTFTFAVSPRQSGK*HPARGP
Trigger: AGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCT...GGGGGAGACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp CACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGCTGGCCCTCTCCCTCTaGTCTCCATCACTAGCGGCT +
Preference number: 2 (lower is better)
Translates to: HPGQPTMLPSASPPLGLALALSL*SPSLAA
Trigger: AGCCGCTAGTGATGGAGAGCAGAGGGAGAGGGCCAG...CGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCTGCTGTGTGGGCGTGTaGGAGTCTGGAGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPCCVGV*ESGAWP
Trigger: GGGCCAGGCTCCAGACTCCCACACGCCCACACAGCA...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR TCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCRQSGK*HPARGP
Trigger: AGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCT...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR TCA 90 bp CTCGGCCCCAGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGCCACCTGGATCTCGATaGGGTCACTCGGGGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LGPSQVAMFVEQQLGNQPPPGSR*GHSGVC
Trigger: GCACACCCCCGAGTGACCTCATCGAGATCCAGGTGG...CGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTCAGGAGACTCCATCCTaGTCCACCCGTGGAGGACCA +
Preference number: 2 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCQETPS*STRGGP
Trigger: TGGTCCTCCACGGGTGGACCAGGATGGAGTCTCCTG...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGGGACCACAATGGGGGTaGGGGTTGCCGCTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPGPQWG*GLPLLE
Trigger: CTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCC...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTGCTCAGGGACCAGCGTaGTGTCCGTCACCTTCACCA +
Preference number: 2 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCAQGPA*CPSPSP
Trigger: TGGTGAAGGTGACGGACACCACGCTGGTCCCTGAGC...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR CCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGGGCACAAGGCACAGTaGAAAGAACCTGGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAGHKAQ*KEPGSG
Trigger: CCCGGAGCCAGGTTCTTTCCACTGTGCCTTGTGCCC...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CAA 90 bp GCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTaGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGT +
Preference number: 2 (lower is better)
Translates to: ANQETVGEVTSSPWA*PLAAHPQSCKSCTC
Trigger: ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR TCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTAGTTGGAGGAGTTGTTaGAGGTGCGGTCGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCSWRSC*RCGRRA
Trigger: CGCTCTGCGACCGCACCTTCAACAACTCCTCCAACT...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCTCCTCCTCTGAAGTaGCCAGGCTCTGTCGTGACA +
Preference number: 2 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPAPPLK*PGSVVT
Trigger: TGTCACGACAGAGCCTGGGCACTTCAGAGGAGGAGC...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR GCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGCTTGGCGCAGAACCTaGAGGCAAAAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAAWRRT*RQKASP
Trigger: TGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGC...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR CCA 90 bp ACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCGGGCGTGTGGGAGTCTaGAGCCTGGCCCTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: TRTSQPRDSRGSDIQPVGGRVGV*SLALSL
Trigger: GAGGGAGAGGGCCAGGCTCCAGACTCCCACACGCCC...GCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp CTCGGCCCCAGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGACAGTGGAAAGAACCTaGCTCCGGGGGCTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LGPSQVAMFVEQQLGNQPTVERT*LRGLRD
Trigger: GTCCCTGAGCCCCCGGAGCCAGGTTCTTTCCACTGT...CGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR TCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCACCTCTGGCTTTGAGGTaGTGGGATCCCAGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAPLALR*WDPRVS
Trigger: AGAGACTCTGGGATCCCATCACCTCAAAGCCAGAGG...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCCAGGTCCAGTGCAATaGAGTGAGGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPPGPVQ*SEVGRR
Trigger: TCTCCTGCCTACCTCACTGCATTGCACTGGACCTGG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGGGGTTGCCGCTGTTaGAGTCAAGATCCTATGGTC +
Preference number: 2 (lower is better)
Translates to: STPRPAHHAAISQPALGIGGCRC*SQDPMV
Trigger: GACCATAGGATCTTGACTCCAACAGCGGCAACCCCC...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CCCTGGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACCTTCGCGGTCTCCCCCGTCACCTTCACCACCTaGATCTCGATGAGGTCACTC +
Preference number: 2 (lower is better)
Translates to: PWSAAYWSASTFTFAVSPVTFTT*ISMRSL
Trigger: GAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGAC...GGGGGAGACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR TCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACGCCCAGGCTCTGTCGTaGCAGGCTGGGTCTTGCACA +
Preference number: 2 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDAQALS*QAGSCT
Trigger: TGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGC...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR TCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATGCCCAGGCTCTGTCGTaGCAGGCTGGGTCTTGCACA +
Preference number: 2 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNAQALS*QAGSCT
Trigger: TGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGC...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR TCA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGTCCAGTGCAATGCAGTaGGGTAGGCAGGAGACTCCA +
Preference number: 2 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPSSAMQ*GRQETP
Trigger: TGGAGTCTCCTGCCTACCTCACTGCATTGCACTGGA...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR TCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTTCACAGATAACCTGGTaGGTGTCTTCTGCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: STPRPAHHAAISQPALGISQITW*VSSARG
Trigger: CCCTCTGGCAGAAGACACTCACCAGGTTATCTGTGA...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR TCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGGTGGTCTCGCATGTCTaGGGAGCGGCGGAAGGGCTT +
Preference number: 2 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKVVSHV*GAAEGL
Trigger: AAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCAC...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCGCACACCCGCAGAGCTaGAAGAGCTGCACCTGTCCT +
Preference number: 2 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPAHPQS*KSCTCP
Trigger: AGGACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGC...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTTGCTGTGTGGGCGTGTaGGAGTCTGGAGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSCCVGV*ESGAWP
Trigger: GGGCCAGGCTCCAGACTCCCACACGCCCACACAGCA...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CCTCTGAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGGGCAGAGGTGCTGTGTaGGCGTGTGGGAGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: PLKCPGSVVTGWVLHKDKGRGAV*ACGSLE
Trigger: CTCCAGACTCCCACACGCCCACACAGCACCTCTGCC...CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp CTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: LRRRVDGLRTDHNGGGGCVTSSP*ALPLAA
Trigger: TGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCAC...GCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCTGGCCCTCTCCCTCTaGTCTCCATCACTAGCGGCT +
Preference number: 2 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDLALSL*SPSLAA
Trigger: AGCCGCTAGTGATGGAGAGCAGAGGGAGAGGGCCAG...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CCA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACGGGCGTGTGGGAGTCTaGAGCCTGGCCCTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDGRVGV*SLALSL
Trigger: GAGGGAGAGGGCCAGGCTCCAGACTCCCACACGCCC...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTCTCTCAGCGGTGACTTaGGGACCCTCTGGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: HQPARPWDWRGLGSKLFALSAVT*GPSGFE
Trigger: CTCAAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAG...AGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCACCGAAGAAGAGTGGATaGGTTAAGGACGGACCACAA +
Preference number: 2 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAPKKSG*VKDGPQ
Trigger: TTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGG...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CCTCTGAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGTCGGCCCCAGCCAAGTaGCCATGTTCGTGGAACAGC +
Preference number: 2 (lower is better)
Translates to: PLKCPGSVVTGWVLHKDKSAPAK*PCSWNS
Trigger: GCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGA...CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACGCTCACAACCATCCCTaGAGCTGTCATCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANAHNHP*SCHLSP
Trigger: GGGGGAGAGATGACAGCTGCAGGGATGGTTGTGAGC...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR GCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGAAGTGGGTGCGCTGGTaGTTGCGGAAGTTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKKWVRW*LRKLEE
Trigger: CTCCTCCAACTTCCGCAAGCACCAGCGCACCCACTT...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR GCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTGGGATGCTAGGTAGCTaGTTGCTTTATGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCGMLGS*LLYVFS
Trigger: TGAGAACACATAAAGCAAGCAGCTACCTAGCATCCC...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGCTTCGAACTGGGAGTaGAGGAAATTAGAGAAACCT +
Preference number: 2 (lower is better)
Translates to: STPRPAHHAAISQPALGIASNWE*RKLEKP
Trigger: AGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGC...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp CCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTaGGAGTGGAGGAAATTAGAG +
Preference number: 2 (lower is better)
Translates to: PCCHQPARPWDWRGLGSKLFASN*EWRKLE
Trigger: CTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAG...CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR TCA 90 bp CCCTTCAGAAGGTCCTTTAATAGGAACAGAACTGAAGGTGTCACACCTCCAGCTTCCTGGCTCCTCCTCTaGAGTGCCCAGGCTCTGTCG +
Preference number: 2 (lower is better)
Translates to: PFRRSFNRNRTEGVTPPASWLLL*SAQALS
Trigger: CGACAGAGCCTGGGCACTTCAGAGGAGGAGCCAGGA...AGCTGGAGGTGTGACACCTTCAGTTCTGTTCCTATTAAAGGACCTTCTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CAA 90 bp AAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTaGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTTACATCCTT +
Preference number: 2 (lower is better)
Translates to: KKSGWVKDGPQWGWG*PLLESRSYGQAYIL
Trigger: AAGGATGTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR TCA 90 bp CTAGGTAGCTGCTTGCTTTATGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGGACCCTCTGGCTTTaGGGTGATGGGATCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LGSCLLYVFSVASEEEWMGTLWL*GDGIPE
Trigger: CTCTGGGATCCCATCACCTCAAAGCCAGAGGGTCCC...CATCCACTCTTCTTCGGAGGCAACTGAGAACACATAAAGCAAGCAGCTACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGCTCACAACCATCCCTaGAGCTGTCATCTCTCCCCC +
Preference number: 2 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNAHNHP*SCHLSP
Trigger: GGGGGAGAGATGACAGCTGCAGGGATGGTTGTGAGC...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CCA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACTCTGTCGTGACAGGCTaGGTCTTGCACAAGGACAAG +
Preference number: 2 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDSVVTG*VLHKDK
Trigger: CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGA...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATCCAGGTCCAGTGCAATaGAGTGAGGTAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNPGPVQ*SEVGRR
Trigger: TCTCCTGCCTACCTCACTGCATTGCACTGGACCTGG...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR GCA 90 bp CTAGGTAGCTGCTTGCTTTATGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGCTGGTGAGTGTCTTCTaGCAGAGGGTGGATAGGCAT +
Preference number: 2 (lower is better)
Translates to: LGSCLLYVFSVASEEEWMLVSVF*QRVDRH
Trigger: ATGCCTATCCACCCTCTGGCAGAAGACACTCACCAG...CATCCACTCTTCTTCGGAGGCAACTGAGAACACATAAAGCAAGCAGCTACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR TCA 72 bp GCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTaGAGGCGCGGGGGCAGAGCGCGCAGCGGTAGGGCC +
Preference number: 3 (lower is better)
Translates to: AGAGAGAGAPRP*RRGGRARSGRA
Trigger: GGCCCTACCGCTGCGCGCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 72 bp CGAGAGGTGCCCGGCTCCACCCCGTGCCGGTGCTGGTaGCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGCGG +
Preference number: 3 (lower is better)
Translates to: REVPGSTPCRCW*RSRGAKALKAR
Trigger: CCGCGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGAGCCGGGCACCTCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp GCTCCCCCGTGTGCAAGCTGTAGTGCGCGCGCAGGCTaGCGGGGCCCGGGCAGCTGTGGCCGCACACGTGGC +
Preference number: 3 (lower is better)
Translates to: APPCASCSARAG*RGPGSCGRTRG
Trigger: GCCACGTGTGCGGCCACAGCTGCCCGGGCCCCGCCAGCCTGCGCGCGCACTACAGCTTGCACACGGGGGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 72 bp CTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGAGGTaGCCGGCTCCACCCCGTGCCGGTGCTGGTGCCGGA +
Preference number: 3 (lower is better)
Translates to: LQRPLCPEASER*PAPPRAGAGAG
Trigger: TCCGGCACCAGCACCGGCACGGGGTGGAGCCGGGCACCTCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 72 bp GGCGCAGAACCTGCAGGCAAAAGGCTTCCCCACCGCTaGGCCCGCCGCCGCCGCCGCCATCACCACCTCCGC +
Preference number: 3 (lower is better)
Translates to: GAEPAGKRLPHR*ARRRRRHHHLR
Trigger: GCGGAGGTGGTGATGGCGGCGGCGGCGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp CTCCGAGAGGTGCCCGGCTCCACCCCGTGCCGGTGCTaGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCG +
Preference number: 3 (lower is better)
Translates to: LREVPGSTPCRC*CRSRGAKALKA
Trigger: CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGAGCCGGGCACCTCTCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR-3UTR CAA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCACCGTGGGCCTTGCCTTaGGCCGCACACCCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAPWALP*AAHPQS
Trigger: GCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CAA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCTCCAGCCCGTGGGCCTaGCCTTTGGCCGCACACCCG +
Preference number: 3 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPSSPWA*PLAAHP
Trigger: CGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGA...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR GCA 72 bp TGTCTGAGGAGCGGCGGAAGGGCTTGGCGCAGAACCTaGAGGCAAAAGGCTTCCCCACCGCTGCGCCCGCCG +
Preference number: 3 (lower is better)
Translates to: CLRSGGRAWRRT*RQKASPPLRPP
Trigger: CGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTCCTCAGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 72 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTaGAAGAGCTGCACCTGTCCTCTCCTAGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: PWALPLAAHPQS*KSCTCPLLGLA
Trigger: TGCCAGGCCTAGGAGAGGACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR-3UTR CAA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACAGGGGCGCCAAGGCCTaGAAGGCGCGGGGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDRGAKA*KARGQS
Trigger: GCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCCT...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR GCA 72 bp ACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTaGCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: TLSLHTQASPPC*HQPARPWDWRG
Trigger: TCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR GCA 72 bp GTGACTCTTTCACTCCACACCCAGGCCAGCCCACCATaGTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGG +
Preference number: 3 (lower is better)
Translates to: VTLSLHTQASPP*CHQPARPWDWR
Trigger: CCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp GAAACCAGCCGGAAGGCAGCAGGGCACAAGGCACAGTaGAAAGAACCTGGCTCCGGGGGCTCAGGGACCAGC +
Preference number: 3 (lower is better)
Translates to: ETSRKAAGHKAQ*KEPGSGGSGTS
Trigger: GCTGGTCCCTGAGCCCCCGGAGCCAGGTTCTTTCCACTGTGCCTTGTGCCCTGCTGCCTTCCGGCTGGTTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp CGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTaGCGCAGAACCTGCAGGCAAAAGGCTTCCCCACCG +
Preference number: 3 (lower is better)
Translates to: RGLACLRSGGRA*RRTCRQKASPP
Trigger: CGGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp AACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: NQETVGEVTSSP*ALPLAAHPQSC
Trigger: GCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 72 bp GCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTaGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: ASPPCCHQPARP*DWRGLGSKLFA
Trigger: AGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp TCAGGGACCAGCGTGGTGTCCGTCACCTTCACCACCTaGATCTCGATGAGGTCACTCGGGGGTGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: SGTSVVSVTFTT*ISMRSLGGVPG
Trigger: GCCTGGCACACCCCCGAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGACGGACACCACGCTGGTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp GCCTTAACTAACCCATGTCCCTGGTCTGCAGCCTACTaGTCGGCCTCCACCTTCACCTTCGCGGTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: ALTNPCPWSAAY*SASTFTFAVSP
Trigger: GGGGGAGACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGGACATGGGTTAGTTAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp CGGCCTCGTACCTCCGCCTTAACTAACCCATGTCCCTaGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACC +
Preference number: 3 (lower is better)
Translates to: RPRTSALTNPCP*SAAYWSASTFT
Trigger: GGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGGACATGGGTTAGTTAAGGCGGAGGTACGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR TCA 72 bp CACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCTTGCCTTTGGCCGCAC +
Preference number: 3 (lower is better)
Translates to: HKDKPTKRQSGK*HPARGPCLWPH
Trigger: GTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 72 bp CCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTaGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAAC +
Preference number: 3 (lower is better)
Translates to: PPCCHQPARPWD*RGLGSKLFASN
Trigger: GTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CAA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGAAGTTGGAGGAGTTGTaGAAGGTGCGGTCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKKLEEL*KVRSQS
Trigger: GCTCTGCGACCGCACCTTCAACAACTCCTCCAACTT...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
3UTR CCA 72 bp CCTCCTCTGAAGTGCCCAGGCTCTGTCGTGACAGGCTaGGTCTTGCACAAGGACAAGCCAACCAAGAGACAG +
Preference number: 3 (lower is better)
Translates to: PPLKCPGSVVTG*VLHKDKPTKRQ
Trigger: CTGTCTCTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CCA 72 bp CCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATaGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCC +
Preference number: 3 (lower is better)
Translates to: PKKSGWVKDGPQ*GWGLPLLESRS
Trigger: GGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CAA 90 bp CCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGTTTATGTGTTCTCAGTaGCCTCCGAAGAAGAGTGGA +
Preference number: 3 (lower is better)
Translates to: PCCHQPARPWDWRGLGSKFMCSQ*PPKKSG
Trigger: TCCACTCTTCTTCGGAGGCAACTGAGAACACATAAA...CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR GCA 72 bp GATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTaGCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTT +
Preference number: 3 (lower is better)
Translates to: DGLRTDHNGGGG*RCWSQDPMVRL
Trigger: AAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp TACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTaGGGACCCTCTGGCTTTGAGGTGATGGGATCCCAG +
Preference number: 3 (lower is better)
Translates to: YILEAQVLSAVT*GPSGFEVMGSQ
Trigger: CTGGGATCCCATCACCTCAAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp AGGACGGACCACAATGGGGGTGGGGGTTGCCGCTGTTaGAGTCAAGATCCTATGGTCAGGCTTACATCCTTG +
Preference number: 3 (lower is better)
Translates to: RTDHNGGGGCRC*SQDPMVRLTSL
Trigger: CAAGGATGTAAGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR TCA 72 bp TGCTTCGAACTGGGAGTGGAGGAAATTAGAGAAACCTaGGGCTACCTTGAGGCTTGTGGGGGACCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: CFELGVEEIRET*GYLEACGGPWA
Trigger: AGCCCAGGGTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp AAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTaGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGT +
Preference number: 3 (lower is better)
Translates to: KSGWVKDGPQWG*GLPLLESRSYG
Trigger: ACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR TCA 72 bp GTTGGAGTCAAGATCCTATGGTCAGGCTTACATCCTTaGGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACC +
Preference number: 3 (lower is better)
Translates to: VGVKILWSGLHP*GSSALSGDLGT
Trigger: GGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGACCATAGGATCTTGACTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR-3UTR CAA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACGTCAGGCTTACATCCTaGAGGCTCAAGTGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDVRLTS*RLKCSQ
Trigger: CTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGAC...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp TGGCGGGGACTAGGCAGTAAGCTGTTTGCTTCGAACTaGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACC +
Preference number: 3 (lower is better)
Translates to: WRGLGSKLFASN*EWRKLEKPEAT
Trigger: GGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAGCTTACTGCCTAGTCCCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CCA 72 bp GGACTAGGCAGTAAGCTGTTTGCTTCGAACTGGGAGTaGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGG +
Preference number: 3 (lower is better)
Translates to: GLGSKLFASNWE*RKLEKPEATLR
Trigger: CCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAGCTTACTGCCTAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp CGAGAGGTGCCCGGCTCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCTGCGGTCGCAGAGCGTaGAGCGGAACGGGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: REVPGSTPCRCWCRSRGACGRRA*SGTGAR
Trigger: GCGAGCGCCCGTTCCGCTGCACGCTCTGCGACCGCA...GGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGAGCCGGGCACCTCTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp AGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCCGCCGCCGCCGCCGCCACCAGCCCGTGGGCCTTaGCTTTGGCCGCACACCCGC +
Preference number: 4 (lower is better)
Translates to: RTCRQKASPPLRPPPPPPPARGP*LWPHTR
Trigger: GCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGG...TGGCGGCGGCGGCGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp AGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCCGCCGCCGCCGCCGCCAGGGCGCTCGCCAGTGTaGATGCGGGCGTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: RTCRQKASPPLRPPPPPPGRSPV*MRAWPL
Trigger: TAGCGGCCACGCCCGCATCCACACTGGCGAGCGCCC...TGGCGGCGGCGGCGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp GGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGACTGTGGCCGCACACGTaGCACCGGCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GHPGPLFCNGRCVRRPPRLWPHT*HRLGSP
Trigger: TGGGGACCCGAGCCGGTGCCACGTGTGCGGCCACAG...TCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGGCCGACGAGCCCAGCTaGCCTCCAGAGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: STPCRCWCRSRGAKALKAADEPS*PPESPS
Trigger: GCTGGGAGACTCTGGAGGCCAGCTGGGCTCGTCGGC...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp CGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGGAGGCCTCCGAGAGGTaGCCGGCTCCACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSDIQPVGLAFGRTPAEEASER*PAPPRA
Trigger: GGCACGGGGTGGAGCCGGGCACCTCTCGGAGGCCTC...CTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGACCGACTCTGGGCCTCTaGGCGCGCAGCGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GHPGPLFCNGRCVRRPPRPTLGL*ARSGHL
Trigger: AAGATGGCCGCTGCGCGCCCAGAGGCCCAGAGTCGG...TCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR TCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGGTGGTCTCGCATGTCTaGGGAGCGGCGGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: STPCRCWCRSRGAKALKAVVSHV*GAAEGL
Trigger: AAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCAC...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp TCACCACCTCCGCCCTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGGCACACCCGCAGAGCTaGAAGAGCTGCACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPPPPSPGPPRASVLQRPAHPQS*KSCTCP
Trigger: AGGACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGC...CGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAGGGCGGAGGTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTCCAGCCCGTGGGCCTTaGCTTTGGCCGCACACCCGC +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCPARGP*LWPHTR
Trigger: GCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGG...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGACAGTGGAAAGAACCTaGCTCCGGGGGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: STPCRCWCRSRGAKALKATVERT*LRGLRD
Trigger: GTCCCTGAGCCCCCGGAGCCAGGTTCTTTCCACTGT...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTCCCGGCCCGTGGAAGTaGGTGCGCTGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCPGPWK*VRWCLR
Trigger: CCGCAAGCACCAGCGCACCCACTTCCACGGGCCGGG...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp TCACCACCTCCGCCCTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGGCTTGGCGCAGAACCTaGAGGCAAAAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPPPPSPGPPRASVLQRPAWRRT*RQKASP
Trigger: TGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGC...CGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAGGGCGGAGGTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGAAGTGGGTGCGCTGGTaGTTGCGGAAGTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: STPCRCWCRSRGAKALKAKWVRW*LRKLEE
Trigger: CTCCTCCAACTTCCGCAAGCACCAGCGCACCCACTT...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCCGACTCTGGGCCTCTaGGCGCGCAGCGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPPTLGL*ARSGHL
Trigger: AAGATGGCCGCTGCGCGCCCAGAGGCCCAGAGTCGG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCTGGAAGTGGGTGCGCTaGTGCTTGCGGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LSGATPGLCSATAAVSGGWKWVR*CLRKLE
Trigger: CTCCAACTTCCGCAAGCACCAGCGCACCCACTTCCA...GCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGGCGTGTGGGAGTCTaGAGCCTGGCCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: STPRPAHHAAISQPALGIGRVGV*SLALSL
Trigger: GAGGGAGAGGGCCAGGCTCCAGACTCCCACACGCCC...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCCGCACCAGGTCCAGTaGCTCCTGGGATCGCGACTC +
Preference number: 4 (lower is better)
Translates to: RGSDIQPVGLAFGRTPAEPHQVQ*LLGSRL
Trigger: GAGTCGCGATCCCAGGAGCCACTGGACCTGGTGCGG...CTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR TCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATGGGGCGCCAAGGCCTTaGAGGCGCGGGGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNGAPRP*RRGGRA
Trigger: CGCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCC...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp GGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGAAGTTGGAGGAGTTGTTaGAGGTGCGGTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GHPGPLFCNGRCVRRPPRSWRSC*RCGRRA
Trigger: CGCTCTGCGACCGCACCTTCAACAACTCCTCCAACT...TCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGGTCACTCGGGGGTGTaGCAGGCCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPGHSGV*QAGSHQ
Trigger: CTGATGACTGCCGGCCTGGCACACCCCCGAGTGACC...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTGGTCACTCGGGGGTGTaGCAGGCCGGCAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCGHSGV*QAGSHQ
Trigger: CTGATGACTGCCGGCCTGGCACACCCCCGAGTGACC...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp AGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGGAAGGCAGCGAGGCCTCCGAGAGGTaGCCGGCTCCACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: SQVAMFVEQQLGNQPEGSEASER*PAPPRA
Trigger: GGCACGGGGTGGAGCCGGGCACCTCTCGGAGGCCTC...GCTGCCTTCCGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp GGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCCTCCGAGAGGGTGCGCTGGTGCTTaGGGAAGTTGGAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GHPGPLFCNGRCVRRPPRGCAGA*GSWRSC
Trigger: ACAACTCCTCCAACTTCCGCAAGCACCAGCGCACCC...TCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp CGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCCCATGTCCCTGGTCTaGAGCCTACTGGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGSDIQPVGLAFGRTPAEPMSLV*SLLVGL
Trigger: GAGGCCGACCAGTAGGCTGCAGACCAGGGACATGGG...CTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp AGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCCGCCGCCGCCGCCGCCACCAGGTCCAGTGCAATaGAGTGAGGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RTCRQKASPPLRPPPPPPPGPVQ*SEVGRR
Trigger: TCTCCTGCCTACCTCACTGCATTGCACTGGACCTGG...TGGCGGCGGCGGCGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACAGGTGAGCTCCGACTCTaGGCCTCTGGGCGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTGELRL*ASGRAA
Trigger: CGCTGCGCGCCCAGAGGCCCAGAGTCGGAGCTCACC...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CAA 72 bp GTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTaGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: VGEVTSSPWALP*AAHPQSCKSCT
Trigger: GGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp TCCACCCCGTGCCGGTGCTGGTGCCGGAGCAGGGGCGCCAAGGCCTTGAAGGCGTCACAGATAACCTGGTaGGTGTCTTCTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: STPCRCWCRSRGAKALKASQITW*VSSARG
Trigger: CCCTCTGGCAGAAGACACTCACCAGGTTATCTGTGA...CGCCTTCAAGGCCTTGGCGCCCCTGCTCCGGCACCAGCACCGGCACGGGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp TCACCACCTCCGCCCTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGGTGAGTGTCTTCTaGCAGAGGGTGGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: SPPPPSPGPPRASVLQRPLVSVF*QRVDRH
Trigger: ATGCCTATCCACCCTCTGGCAGAAGACACTCACCAG...CGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAGGGCGGAGGTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCAGGCCCCTTCCTTaGCCGCACCAGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTPRPLP*PHQVQW
Trigger: CCACTGGACCTGGTGCGGGCAAGGAAGGGGCCTGGG...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCAGGACCAGGTCCAGTaGCTCCTGGGATCGCGACTC +
Preference number: 4 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPQDQVQ*LLGSRL
Trigger: GAGTCGCGATCCCAGGAGCCACTGGACCTGGTCCTG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp AGAACCTGCAGGCAAAAGGCTTCCCCACCGCTGCGCCCGCCGCCGCCGCCGCCAGTCACCTTCACCACCTaGATCTCGATGAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: RTCRQKASPPLRPPPPPPVTFTT*ISMRSL
Trigger: GAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGAC...TGGCGGCGGCGGCGGCGGGCGCAGCGGTGGGGAAGCCTTTTGCCTGCAGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp CGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGGCTCAGGGACCAGCGTaGTGTCCGTCACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RGSDIQPVGLAFGRTPAEAQGPA*CPSPSP
Trigger: TGGTGAAGGTGACGGACACCACGCTGGTCCCTGAGC...CTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAAGCGGCGGAAGGGCTTaGCGCAGAACCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPASGGRA*RRTCRQ
Trigger: TTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCT...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCCTGGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACCTTCGCGGTCTCCCCCGATGCCGCAATGGTATaGCCGCTCGCCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PWSAAYWSASTFTFAVSPDAAMV*PLASVH
Trigger: GTGCACACTGGCGAGCGGCCATACCATTGCGGCATC...GGGGGAGACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCGGGCGCTCGCCAGTGTaGATGCGGGCGTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPGRSPV*MRAWPL
Trigger: TAGCGGCCACGCCCGCATCCACACTGGCGAGCGCCC...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CAA 72 bp GAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTaGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ETVGEVTSSPWA*PLAAHPQSCKS
Trigger: GCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCCGACTCCGGAGTCGGTaGGCTCCGACTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPRLRSR*APTLGL
Trigger: GAGGCCCAGAGTCGGAGCTCACCGACTCCGGAGTCG...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACAGCACCGAGGACTGGGTaGAGCCCTTGCCGCAGATGC +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTAPRTG*SPCRRC
Trigger: GCATCTGCGGCAAGGGCTTCACCCAGTCCTCGGTGC...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp CCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PCCHQPARPWDWRGLGSKRQSGK*HPARGP
Trigger: AGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCT...CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp CACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGCCTCTGGCTTTGAGGTaGTGGGATCCCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HPGQPTMLPSASPPLGLAPLALR*WDPRVS
Trigger: AGAGACTCTGGGATCCCATCACCTCAAAGCCAGAGG...CGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTAAGTGCTCTCAGCGGTaGCTTGGGGACCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STPRPAHHAAISQPALGIKCSQR*LGDPLA
Trigger: AGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTT...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCATCGCCCCCACCACAGTaGCTCTTTCACTCCACACCC +
Preference number: 4 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPASPPPQ*LFHSTP
Trigger: GGGTGTGGAGTGAAAGAGTCACTGTGGTGGGGGCGA...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACTGCGGTCGCAGAGCGTaGAGCGGAACGGGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDCGRRA*SGTGAR
Trigger: GCGAGCGCCCGTTCCGCTGCACGCTCTGCGACCGCA...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCCTGGCCCTCTCCCTCTaGTCTCCATCACTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPLALSL*SPSLAA
Trigger: AGCCGCTAGTGATGGAGAGCAGAGGGAGAGGGCCAG...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTACAGTGGAAAGAACCTaGCTCCGGGGGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCTVERT*LRGLRD
Trigger: GTCCCTGAGCCCCCGGAGCCAGGTTCTTTCCACTGT...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCTCGGCCCCAGCCAAGTaGCCATGTTCGTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: DSRGSDIQPVGLAFGRTPSAPAK*PCSWNS
Trigger: GCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGA...GGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTTCGGCCCCAGCCAAGTaGCCATGTTCGTGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCSAPAK*PCSWNS
Trigger: GCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGA...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATCTGTGGCCGCACACGTaGCACCGGCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNLWPHT*HRLGSP
Trigger: TGGGGACCCGAGCCGGTGCCACGTGTGCGGCCACAG...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACAGTGTGGATGCGGGCGTaGCCGCTAAGCACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTVWMRA*PLSTED
Trigger: GTCCTCGGTGCTTAGCGGCCACGCCCGCATCCACAC...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATCCCGGCCCGTGGAAGTaGGTGCGCTGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNPGPWK*VRWCLR
Trigger: CCGCAAGCACCAGCGCACCCACTTCCACGGGCCGGG...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCGGGCGTGTGGGAGTCTaGAGCCTGGCCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPGRVGV*SLALSL
Trigger: GAGGGAGAGGGCCAGGCTCCAGACTCCCACACGCCC...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGGGCAGAGGTGCTGTGTaGGCGTGTGGGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPGRGAV*ACGSLE
Trigger: CTCCAGACTCCCACACGCCCACACAGCACCTCTGCC...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPVTSSP*ALPLAA
Trigger: TGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCAC...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CAA 72 bp TCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTaGGCGCAGAACCTGCAGGCAAAAGGCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SWSRMSEERRKG*AQNLQAKGFPT
Trigger: GGTGGGGAAGCCTTTTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR TCA 90 bp CCACAATGGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTCGACTCCGGAGTCGGTaGGCTCCGACTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PQWGWGLPLLESRSYGQARLRSR*APTLGL
Trigger: GAGGCCCAGAGTCGGAGCTCACCGACTCCGGAGTCG...AGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCACCTGGATCTCGATaGGGTCACTCGGGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTPPGSR*GHSGVC
Trigger: GCACACCCCCGAGTGACCTCATCGAGATCCAGGTGG...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp CCCTGGTCTGCAGCCTACTGGTCGGCCTCCACCTTCACCTTCGCGGTCTCCCCCTCCAGTGCAATGCAGTaGGGTAGGCAGGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PWSAAYWSASTFTFAVSPSSAMQ*GRQETP
Trigger: TGGAGTCTCCTGCCTACCTCACTGCATTGCACTGGA...GGGGGAGACCGCGAAGGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR GCA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCCCGGGCCTCTGTTCTaGAACGGCCGCTGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANPGPLF*NGRCVR
Trigger: CCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGG...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTAAGTGGGTGCGCTGGTaGTTGCGGAAGTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCKWVRW*LRKLEE
Trigger: CTCCTCCAACTTCCGCAAGCACCAGCGCACCCACTT...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp CCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGGCCCTCTCCCTCTaGTCTCCATCACTAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PCCHQPARPWDWRGLGSKLALSL*SPSLAA
Trigger: AGCCGCTAGTGATGGAGAGCAGAGGGAGAGGGCCAG...CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGCTCCTCCTCTGAAGTaGCCAGGCTCTGTCGTGACA +
Preference number: 4 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPAAPPLK*PGSVVT
Trigger: TGTCACGACAGAGCCTGGGCACTTCAGAGGAGGAGC...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTGCTCCTCCTCTGAAGTaGCCAGGCTCTGTCGTGACA +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCAPPLK*PGSVVT
Trigger: TGTCACGACAGAGCCTGGGCACTTCAGAGGAGGAGC...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACGCCAGCCCACCATGCTaGCATCAGCCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANASPPC*HQPARP
Trigger: AGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGC...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CTCGGCCCCAGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGGGGCACAAGGCACAGTaGAAAGAACCTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LGPSQVAMFVEQQLGNQPGHKAQ*KEPGSG
Trigger: CCCGGAGCCAGGTTCTTTCCACTGTGCCTTGTGCCC...CGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCTGGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp GTGTGCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTGGCGACTAACCCATGTCCCTaGTCTGCAGCCTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: VCTRSWSRMSEERRKGLATNPCP*SAAYWS
Trigger: CGACCAGTAGGCTGCAGACCAGGGACATGGGTTAGT...CGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp AGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGGAAGGCAGCCGTGGGCCTTGCCTTTaGCCGCACACCCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SQVAMFVEQQLGNQPEGSRGPCL*PHTRRA
Trigger: AGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACG...GCTGCCTTCCGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR TCA 90 bp CATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTGTGGTCTCGCATGTCTaGGGAGCGGCGGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: HQPARPWDWRGLGSKLFAVVSHV*GAAEGL
Trigger: AAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCAC...AGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp GCCAGAGGGTGGATAGGCATCCCAGGTCCAGTGCAATGCAGTGAGGTAGGCAGGAGACAGTCGGGGAAGTaGCATCCAGCCCGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ARGWIGIPGPVQCSEVGRRQSGK*HPARGP
Trigger: AGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCT...CCTGCCTACCTCACTGCATTGCACTGGACCTGGGATGCCTATCCACCCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp GCCAGAGGGTGGATAGGCATCCCAGGTCCAGTGCAATGCAGTGAGGTAGGCAGGTCCTGGCTCCTCCTCTaGAGTGCCCAGGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: ARGWIGIPGPVQCSEVGRSWLLL*SAQALS
Trigger: CGACAGAGCCTGGGCACTTCAGAGGAGGAGCCAGGA...CCTGCCTACCTCACTGCATTGCACTGGACCTGGGATGCCTATCCACCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGGGGTGCGCTGGTGCTTaGGGAAGTTGGAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPGCAGA*GSWRSC
Trigger: ACAACTCCTCCAACTTCCGCAAGCACCAGCGCACCC...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCAGGTCCAGTGGCTCCTaGGATCGCGACTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPRSSGS*DRDSGV
Trigger: GACTCCGGAGTCGCGATCCCAGGAGCCACTGGACCT...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACTAAGCACCGAGGACTaGGTGAAGCCCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTLSTED*VKPLPQ
Trigger: CTGCGGCAAGGGCTTCACCCAGTCCTCGGTGCTTAG...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATGTGTGGATGCGGGCGTaGCCGCTAAGCACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNVWMRA*PLSTED
Trigger: GTCCTCGGTGCTTAGCGGCCACGCCCGCATCCACAC...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTACTAACCCATGTCCCTaGTCTGCAGCCTACTGGTCG +
Preference number: 4 (lower is better)
Translates to: STPRPAHHAAISQPALGITNPCP*SAAYWS
Trigger: CGACCAGTAGGCTGCAGACCAGGGACATGGGTTAGT...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACTGCTGTGTGGGCGTGTaGGAGTCTGGAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDCCVGV*ESGAWP
Trigger: GGGCCAGGCTCCAGACTCCCACACGCCCACACAGCA...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp ACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCTGCTGTGTGGGCGTGTaGGAGTCTGGAGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRTSQPRDSRGSDIQPVGCCVGV*ESGAWP
Trigger: GGGCCAGGCTCCAGACTCCCACACGCCCACACAGCA...GCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCGTGACATCCAGCCCGTaGGCCTTGCCTTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPVTSSP*ALPLAA
Trigger: TGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCAC...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACAGGAGACTCCATCCTaGTCCACCCGTGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTQETPS*STRGGP
Trigger: TGGTCCTCCACGGGTGGACCAGGATGGAGTCTCCTG...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTCTCAGCGGTGACTTaGGGACCCTCTGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PCCHQPARPWDWRGLGSKLSAVT*GPSGFE
Trigger: CTCAAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAG...CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATGGCAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTCAGCCAGCCCGCCCTTaGGATTGGCGGGGACTAGGC +
Preference number: 4 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSQPARP*DWRGLG
Trigger: GCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTG...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATCCACCTGGATCTCGATaGGGTCACTCGGGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNPPGSR*GHSGVC
Trigger: GCACACCCCCGAGTGACCTCATCGAGATCCAGGTGG...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGGCCCAGGCTCTGTCGTaGCAGGCTGGGTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKAQALS*QAGSCT
Trigger: TGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGC...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp TCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGCCCTTGGGATTCTGGTGAGTGTCTTCTaGCAGAGGGTGGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: STPRPAHHAAISQPALGILVSVF*QRVDRH
Trigger: ATGCCTATCCACCCTCTGGCAGAAGACACTCACCAG...AATCCCAAGGGCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp AGCCAAGTGGCCATGTTCGTGGAACAGCAGCTCGGAAACCAGCCGGAAGGCAGCGCTCAGGGACCAGCGTaGTGTCCGTCACCTTCACCA +
Preference number: 4 (lower is better)
Translates to: SQVAMFVEQQLGNQPEGSAQGPA*CPSPSP
Trigger: TGGTGAAGGTGACGGACACCACGCTGGTCCCTGAGC...GCTGCCTTCCGGCTGGTTTCCGAGCTGCTGTTCCACGAACATGGCCACTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACAGCGGCGGAAGGGCTTaGCGCAGAACCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDSGGRA*RRTCRQ
Trigger: TTGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCT...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGGGCAGAGGTGCTGTGTaGGCGTGTGGGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKGRGAV*ACGSLE
Trigger: CTCCAGACTCCCACACGCCCACACAGCACCTCTGCC...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTCGTGGGCCTTGCCTTTaGCCGCACACCCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSRGPCL*PHTRRA
Trigger: AGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACG...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTTCTGTCGTGACAGGCTaGGTCTTGCACAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCSVVTG*VLHKDK
Trigger: CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGA...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACGGACCACAATGGGGGTaGGGGTTGCCGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDGPQWG*GLPLLE
Trigger: CTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCC...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCAAGGACGGACCACAATaGGGGTGGGGGTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRRRVDGLRTDHNGGGGCKDGPQ*GWGLPL
Trigger: CAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTT...GCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATGCCCGCCCTTGGGATTaGCGGGGACTAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNARPWD*RGLGSK
Trigger: CTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGC...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACCAGGCCAGCCCACCATaGTGCCATCAGCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDQASPP*CHQPAR
Trigger: GCGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTG...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACGGGCACAAGGCACAGTaGAAAGAACCTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDGHKAQ*KEPGSG
Trigger: CCCGGAGCCAGGTTCTTTCCACTGTGCCTTGTGCCC...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACGTGTGCACGCGCTCGTaGTCTCGCATGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANVCTRS*SRMSEE
Trigger: CTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGCTAAGCACCGAGGACTaGGTGAAGCCCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKLSTED*VKPLPQ
Trigger: CTGCGGCAAGGGCTTCACCCAGTCCTCGGTGCTTAG...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp GAGACTCCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACTGGTCTGCAGCCTACTaGTCGGCCTCCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: ETPSWSTRGGPEQKTMVDWSAAY*SASTFT
Trigger: GGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCA...GTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
3UTR CAA 72 bp CTGAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTaGCACAAGGACAAGCCAACCAAGAGACAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LKCPGSVVTGWV*HKDKPTKRQSG
Trigger: CCCCGACTGTCTCTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp CCACAATGGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTAGTTGGAGGAGTTGTTaGAGGTGCGGTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PQWGWGLPLLESRSYGQASWRSC*RCGRRA
Trigger: CGCTCTGCGACCGCACCTTCAACAACTCCTCCAACT...AGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTGGGACCCTCTGGCTTTaGGGTGATGGGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSGTLWL*GDGIPE
Trigger: CTCTGGGATCCCATCACCTCAAAGCCAGAGGGTCCC...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp CCTCTGAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGGCTCACAACCATCCCTaGAGCTGTCATCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLKCPGSVVTGWVLHKDKAHNHP*SCHLSP
Trigger: GGGGGAGAGATGACAGCTGCAGGGATGGTTGTGAGC...CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp ACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCGCTCACAACCATCCCTaGAGCTGTCATCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TRTSQPRDSRGSDIQPVGAHNHP*SCHLSP
Trigger: GGGGGAGAGATGACAGCTGCAGGGATGGTTGTGAGC...GCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp CTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCTCCAGTGCAATGCAGTaGGGTAGGCAGGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LRRRVDGLRTDHNGGGGCSSAMQ*GRQETP
Trigger: TGGAGTCTCCTGCCTACCTCACTGCATTGCACTGGA...GCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp ACAAGGACAAGCCAACCAAGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCCAGGTCCAGTGCAATaGAGTGAGGTAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TRTSQPRDSRGSDIQPVGPGPVQ*SEVGRR
Trigger: TCTCCTGCCTACCTCACTGCATTGCACTGGACCTGG...GCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCTTGGTTGGCTTGTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR GCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGAATGGGGGTGGGGGTTaGCGCTGTTGGAGTCAAGAT +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKNGGGG*RCWSQD
Trigger: ATCTTGACTCCAACAGCGGCAACCCCCACCCCCATT...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CCCTTCAGAAGGTCCTTTAATAGGAACAGAACTGAAGGTGTCACACCTCCAGCTGGTGAGCTCCGACTCTaGGCCTCTGGGCGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PFRRSFNRNRTEGVTPPAGELRL*ASGRAA
Trigger: CGCTGCGCGCCCAGAGGCCCAGAGTCGGAGCTCACC...AGCTGGAGGTGTGACACCTTCAGTTCTGTTCCTATTAAAGGACCTTCTGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTGGCTTTGATGCCGCAATGGTATaGCCGCTCGCCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: YILEAQVLSAVTWGPSGFDAAMV*PLASVH
Trigger: GTGCACACTGGCGAGCGGCCATACCATTGCGGCATC...AAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGCCGACGAGCCCAGCTaGCCTCCAGAGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNADEPS*PPESPS
Trigger: GCTGGGAGACTCTGGAGGCCAGCTGGGCTCGTCGGC...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCTCTGTCGTGACAGGCTaGGTCTTGCACAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPSVVTG*VLHKDK
Trigger: CTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGA...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGGGGGGTTGCCGCTGTTaGAGTCAAGATCCTATGGTC +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKGGCRC*SQDPMV
Trigger: GACCATAGGATCTTGACTCCAACAGCGGCAACCCCC...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000325351.5
3UTR CAA 72 bp GGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTaGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GWVKDGPQWGWG*PLLESRSYGQA
Trigger: AGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACTCACAGATAACCTGGTaGGTGTCTTCTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANSQITW*VSSARG
Trigger: CCCTCTGGCAGAAGACACTCACCAGGTTATCTGTGA...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR TCA 90 bp CTAGGTAGCTGCTTGCTTTATGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGCACCGAGGACTGGGTaGAGCCCTTGCCGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LGSCLLYVFSVASEEEWMAPRTG*SPCRRC
Trigger: GCATCTGCGGCAAGGGCTTCACCCAGTCCTCGGTGC...CATCCACTCTTCTTCGGAGGCAACTGAGAACACATAAAGCAAGCAGCTACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATTCCTGGCTCCTCCTCTaGAGTGCCCAGGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNSWLLL*SAQALS
Trigger: CGACAGAGCCTGGGCACTTCAGAGGAGGAGCCAGGA...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTTCAGGCTTACATCCTTaGGGCTCAAGTGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSSGLHP*GSSALS
Trigger: GCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGA...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp AGAGACAGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACAGGGATGCTAGGTAGCTaGTTGCTTTATGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RDSRGSDIQPVGLAFGRTGMLGS*LLYVFS
Trigger: TGAGAACACATAAAGCAAGCAGCTACCTAGCATCCC...TGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp CCCTTCAGAAGGTCCTTTAATAGGAACAGAACTGAAGGTGTCACACCTCCAGCTGCCCAGGCTCTGTCGTaGCAGGCTGGGTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: PFRRSFNRNRTEGVTPPAAQALS*QAGSCT
Trigger: TGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGC...AGCTGGAGGTGTGACACCTTCAGTTCTGTTCCTATTAAAGGACCTTCTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATTGGTCTGCAGCCTACTaGTCGGCCTCCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNWSAAY*SASTFT
Trigger: GGTGAAGGTGGAGGCCGACCAGTAGGCTGCAGACCA...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTCCGAAGAAGAGTGGATaGGTTAAGGACGGACCACAA +
Preference number: 4 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSPKKSG*VKDGPQ
Trigger: TTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGG...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACGCTTGTGGGGGACCCTaGGCTCTGAGTCTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDACGGP*ALSLKL
Trigger: AAGCTTTAGACTCAGAGCCCAGGGTCCCCCACAAGC...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CTAGGTAGCTGCTTGCTTTATGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGTGTGCACGCGCTCGTaGTCTCGCATGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGSCLLYVFSVASEEEWMVCTRS*SRMSEE
Trigger: CTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC...CATCCACTCTTCTTCGGAGGCAACTGAGAACACATAAAGCAAGCAGCTACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGTGTTCTCAGTTGCCTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATTGGAAGTGGGTGCGCTaGTGCTTGCGGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CVLSCLRRRVDGLRTDHNWKWVR*CLRKLE
Trigger: CTCCAACTTCCGCAAGCACCAGCGCACCCACTTCCA...ATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAGGCAACTGAGAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp TGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACCAAGCTGTTTGCTTCGAACTaGGAGTGGAGGAAATTAGAG +
Preference number: 4 (lower is better)
Translates to: CPGSVVTGWVLHKDKPTKLFASN*EWRKLE
Trigger: CTCTAATTTCCTCCACTCCCAGTTCGAAGCAAACAG...CTTGGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR GCA 90 bp CCATCCTGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTTATGTGTTCTCAGTTaGCTCCGAAGAAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSWSTRGGPEQKTMVDPNLCVLS*LRRRVD
Trigger: ATCCACTCTTCTTCGGAGGCAACTGAGAACACATAA...ATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCAGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR TCA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACGAAATTAGAGAAACCTaGGGCTACCTTGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDEIRET*GYLEAC
Trigger: ACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTC...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CCA 90 bp CCCTTCAGAAGGTCCTTTAATAGGAACAGAACTGAAGGTGTCACACCTCCAGCTGTCACCTTCACCACCTaGATCTCGATGAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: PFRRSFNRNRTEGVTPPAVTFTT*ISMRSL
Trigger: GAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGAC...AGCTGGAGGTGTGACACCTTCAGTTCTGTTCCTATTAAAGGACCTTCTGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp TCACCACCTCCGCCCTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGGCCCAGGCCCCTTCCTaGCCCGCACCAGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SPPPPSPGPPRASVLQRPAQAPS*PAPGPV
Trigger: CACTGGACCTGGTGCGGGCAAGGAAGGGGCCTGGGC...CGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAGGGCGGAGGTGGTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CAA 90 bp CTCTCCGGGGCCACCCCGGGCCTCTGTTCTGCAACGGCCGCTGTGTCCGGAGGCGAGCGGCGGAAGGGCTaGGCGCAGAACCTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LSGATPGLCSATAAVSGGERRKG*AQNLQA
Trigger: TGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTC...GCCTCCGGACACAGCGGCCGTTGCAGAACAGAGGCCCGGGGTGGCCCCGGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS CCA 90 bp CCACGCCCAGGCCCCTTCCTTGCCCGCACCAGGTCCAGTGGCTCCTaGGATCGCGACTCCGGAGTCGGTGAGCTCCGACTCTGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PRPGPFLARTRSSGS*DRDSGVGELRLWAS
Trigger: AGAGGCCCAGAGTCGGAGCTCACCGACTCCGGAGTCGCGATCCCAGGAGCCACTGGACCTGGTGCGGGCAAGGAAGGGGCCTGGGCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CAA 90 bp GTGTGCACGCGCTCGTGGTCTCGCATGTCTGAGGAGCGGCGGAAGGGCTTGGCGTCCAGCCCGTGGGCCTaGCCTTTGGCCGCACACCCG +
Preference number: 5 (lower is better)
Translates to: VCTRSWSRMSEERRKGLASSPWA*PLAAHP
Trigger: CGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGA...CGCCAAGCCCTTCCGCCGCTCCTCAGACATGCGAGACCACGAGCGCGTGCACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS GCA 90 bp TCATCAGGCACCAGGACCTCGAGCCCCACGCCCAGGCCCCTTCCTTaGCCGCACCAGGTCCAGTGGCTCCTGGGATCGCGACTCCGGAGT +
Preference number: 5 (lower is better)
Translates to: SSGTRTSSPTPRPLP*PHQVQWLLGSRLRS
Trigger: ACTCCGGAGTCGCGATCCCAGGAGCCACTGGACCTGGTGCGGGCAAGGAAGGGGCCTGGGCGTGGGGCTCGAGGTCCTGGTGCCTGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS-3UTR CAA 90 bp GACTCTTTCACTCCACACCCAGGCCAGCCCACCATGCTGCCATCAGCCAGCCCGTCCAGCCCGTGGGCCTaGCCTTTGGCCGCACACCCG +
Preference number: 5 (lower is better)
Translates to: DSFTPHPGQPTMLPSASPSSPWA*PLAAHP
Trigger: CGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGA...CGGGCTGGCTGATGGCAGCATGGTGGGCTGGCCTGGGTGTGGAGTGAAAGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp GCCAGAGGGTGGATAGGCATCCCAGGTCCAGTGCAATGCAGTGAGGTAGGCAGGAGGGGCGCCAAGGCCTaGAAGGCGCGGGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ARGWIGIPGPVQCSEVGRRGAKA*KARGQS
Trigger: GCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCCT...CCTGCCTACCTCACTGCATTGCACTGGACCTGGGATGCCTATCCACCCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp CTCCGAAGAAGAGTGGATGGGTTAAGGACGGACCACAATGGGGGTGGGGGTTGCAGGGGCGCCAAGGCCTaGAAGGCGCGGGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LRRRVDGLRTDHNGGGGCRGAKA*KARGQS
Trigger: GCTCTGCCCCCGCGCCTTCAAGGCCTTGGCGCCCCT...GCAACCCCCACCCCCATTGTGGTCCGTCCTTAACCCATCCACTCTTCTTCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCCCGTGGGCCTTGCCTTaGGCCGCACACCCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPPWALP*AAHPQS
Trigger: GCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS TCA 90 bp CAGGGACCAGCGTGGTGTCCGTCACCTTCACCACCTGGATCTCGATaGGGTCACTCGGGGGTGTGCCAGGCCGGCAGTCATCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: QGPAWCPSPSPPGSR*GHSGVCQAGSHQAP
Trigger: TGGTGCCTGATGACTGCCGGCCTGGCACACCCCCGAGTGACCTCATCGAGATCCAGGTGGTGAAGGTGACGGACACCACGCTGGTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp CCACAATGGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTCCGTGGGCCTTGCCTTaGGCCGCACACCCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PQWGWGLPLLESRSYGQAPWALP*AAHPQS
Trigger: GCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG...AGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp AGTCGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCACGGAAGTTGGAGGAGTaGTTGAAGGTGCGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: SRGSDIQPVGLAFGRTPARKLEE*LKVRSQ
Trigger: CTGCGACCGCACCTTCAACAACTCCTCCAACTTCCG...TGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp CCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGCTGCAAGAGCTGCACCTGTGTGACAGGCTGGGTCTaGCACAAGGACAAGCCAACC +
Preference number: 5 (lower is better)
Translates to: PWALPLAAHPQSCKSCTCVTGWV*HKDKPT
Trigger: GGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCAC...ACAGGTGCAGCTCTTGCAGCTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACTCAGCCAGCCCGCCCTaGGGATTGGCGGGGACTAGG +
Preference number: 5 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANSASPP*GLAGTR
Trigger: CCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGA...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp TGGGAGTGGAGGAAATTAGAGAAACCTGAGGCTACCTTGAGGCTTGTGGGGGACGAGCGGCGGAAGGGCTaGGCGCAGAACCTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: WEWRKLEKPEATLRLVGDERRKG*AQNLQA
Trigger: TGCCTGCAGGTTCTGCGCCAAGCCCTTCCGCCGCTC...GTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTTCTCTAATTTCCTCCACTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp CATCAGCCAGCCCGCCCTTGGGATTGGCGGGGACTAGGCAGTAAGCTGTTTGCTAAACCTGAGGCTACCTaGAGGCTTGTGGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: HQPARPWDWRGLGSKLFAKPEAT*RLVGDP
Trigger: AGGGTCCCCCACAAGCCTCAAGGTAGCCTCAGGTTT...AGCAAACAGCTTACTGCCTAGTCCCCGCCAATCCCAAGGGCGGGCTGGCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACGTGACAGGCTGGGTCTaGCACAAGGACAAGCCAACC +
Preference number: 5 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANVTGWV*HKDKPT
Trigger: GGTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCAC...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp CAGGCTTACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTCGGAAGTTGGAGGAGTaGTTGAAGGTGCGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: QAYILEAQVLSAVTWGPSRKLEE*LKVRSQ
Trigger: CTGCGACCGCACCTTCAACAACTCCTCCAACTTCCG...AGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp TGGTCCACCCGTGGAGGACCAGAGCAGAAGACTATGGTGGACCCCAATTCCCCCGTCAGGCTTACATCCTaGAGGCTCAAGTGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: WSTRGGPEQKTMVDPNSPVRLTS*RLKCSQ
Trigger: CTGAGAGCACTTGAGCCTCAAGGATGTAAGCCTGAC...GGGGGAATTGGGGTCCACCATAGTCTTCTGCTCTGGTCCTCCACGGGTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp CCACAATGGGGGTGGGGGTTGCCGCTGTTGGAGTCAAGATCCTATGGTCAGGCTTGGGGGTTGCCGCTGTaGGAGTCAAGATCCTATGGT +
Preference number: 5 (lower is better)
Translates to: PQWGWGLPLLESRSYGQAWGLPL*ESRSYG
Trigger: ACCATAGGATCTTGACTCCAACAGCGGCAACCCCCA...AGCCTGACCATAGGATCTTGACTCCAACAGCGGCAACCCCCACCCCCATTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp CGGGGAAGTGACATCCAGCCCGTGGGCCTTGCCTTTGGCCGCACACCCGCAGAGATGCTAGGTAGCTGCTaGCTTTATGTGTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: RGSDIQPVGLAFGRTPAEMLGSC*LYVFSV
Trigger: AACTGAGAACACATAAAGCAAGCAGCTACCTAGCAT...CTCTGCGGGTGTGCGGCCAAAGGCAAGGCCCACGGGCTGGATGTCACTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACTGGTGCTTGCGGAAGTaGGAGGAGTTGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANWCLRK*EELLKV
Trigger: CACCTTCAACAACTCCTCCAACTTCCGCAAGCACCA...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS-3UTR CAA 90 bp TACATCCTTGAGGCTCAAGTGCTCTCAGCGGTGACTTGGGGACCCTCTGGCTTTTGGTGCTTGCGGAAGTaGGAGGAGTTGTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: YILEAQVLSAVTWGPSGFWCLRK*EELLKV
Trigger: CACCTTCAACAACTCCTCCAACTTCCGCAAGCACCA...AAAGCCAGAGGGTCCCCAAGTCACCGCTGAGAGCACTTGAGCCTCAAGGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS-3UTR CAA 90 bp GAAGTGCCCAGGCTCTGTCGTGACAGGCTGGGTCTTGCACAAGGACAAGCCAACTTTATGTGTTCTCAGTaGCCTCCGAAGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: EVPRLCRDRLGLAQGQANFMCSQ*PPKKSG
Trigger: TCCACTCTTCTTCGGAGGCAACTGAGAACACATAAA...GTTGGCTTGTCCTTGTGCAAGACCCAGCCTGTCACGACAGAGCCTGGGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325351.5
CDS TCA 72 bp GTCCAGTGGCTCCTGGGATCGCGACTCCGGAGTCGGTaGGCTCCGACTCTGGGCCTCTGGGCGCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: VQWLLGSRLRSR*APTLGLWARSG
Trigger: GCCGCTGCGCGCCCAGAGGCCCAGAGTCGGAGCTCACCGACTCCGGAGTCGCGATCCCAGGAGCCACTGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325351.5
ENST00000591479.1
CDS GCA 72 bp ACCAGGACCTCGAGCCCCACGCCCAGGCCCCTTCCTTaGCCGCACCAGGTCCAGTGGCTCCTGGGATCGCGA +
Preference number: 6 (lower is better)
Translates to: TRTSSPTPRPLP*PHQVQWLLGSR
Trigger: TCGCGATCCCAGGAGCCACTGGACCTGGTGCGGGCAAGGAAGGGGCCTGGGCGTGGGGCTCGAGGTCCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591479.1
CDS CCA 72 bp GGCCCCTTCCTTGCCCGCACCAGGTCCAGTGGCTCCTaGGATCGCGACTCCGGAGTCGGTGAGCTCCGACTC +
Preference number: 6 (lower is better)
Translates to: GPFLARTRSSGS*DRDSGVGELRL
Trigger: GAGTCGGAGCTCACCGACTCCGGAGTCGCGATCCCAGGAGCCACTGGACCTGGTGCGGGCAAGGAAGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591479.1